mRNA_S-firma_F_contig10221.345.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10221.345.1 vs. uniprot
Match: A0A7S0Q6E0_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q6E0_9EUKA) HSP 1 Score: 114 bits (285), Expect = 6.670e-27 Identity = 81/248 (32.66%), Postives = 117/248 (47.18%), Query Frame = 1
Query: 1 GFNGDAGLTAVAV----TARSRRVEWIGDSMTAGFGTLRGLE---------FTGSCPQADASS----SNYYGFANMICRSIDADCRYIAWSGRGLYVNNAGNKDVLLPDLWKQAL----------GTTVKEVHDFSSWVPDGVVINLGQND--FNHEFKDSVWDAAYIAFIREILAAYNNKPRIFCACGPMDHSSGGPAAFCPNVIRIVEQLDQEGIRIHFMDLQQPFDMRGCTRHPNFEDNEVISDA 657
GF GD G+T A T+R RVE++GDS+TAG+ L L T A S S +AN++C ++ A C AWSG G+ N G D L+ D++++ L GT DFS WVPD VVINLG ND + ++++ Y+ + AY F ACGPMD S +C V ++ + G++ F+D Q F+ GC HP+ ++ I+ A
Sbjct: 53 GFEGDDGMTYTAPLHKSTSRKHRVEFLGDSITAGYCNLCDLSDQRQTQPRPLTAPLGAAAGDSVMEESFELSWANLVCEALGASCHTAAWSGMGMAENCCGG-DTLMSDVYQRTLATVPSYQDPHGTIPSNYWDFSMWVPDAVVINLGTNDQLSSRSGLTPLYNSTYLELVLTAAQAYGRDTTFFLACGPMDES------YCDPVDWVINKARDAGVQAVFLD-QTGFEC-GCCGHPSSASDKAIAAA 291
BLAST of mRNA_S-firma_F_contig10221.345.1 vs. uniprot
Match: A0A2L0F1X9_SORCE (Endo-1,4-beta-glucanase n=1 Tax=Sorangium cellulosum TaxID=56 RepID=A0A2L0F1X9_SORCE) HSP 1 Score: 116 bits (290), Expect = 8.130e-27 Identity = 76/222 (34.23%), Postives = 114/222 (51.35%), Query Frame = 1
Query: 34 AVTARSRRVEWIGDSMTAGFGTLRGLEFTGSCPQADASSSNYYGFANMICRSIDADCRYIAWSGRGLYVNNAGNKDVLLPDLWKQALGTTVKEVHDFSSWVPDGVVINLGQNDFNHEFK-----DSVWDAAYIAFIREILAAYNNKPRIFCACGPMDHSSGGPAAFCPNVIRIV------EQLDQEGIRIHFMDLQQPFDMR----GCTRHPNFEDNEVISD 654
A A RR+E IGDS++AG+G + GL T CP A+ +NY ++ + R ++AD IAWSGRG+Y N G +P+++ + + + + DFSSWVP VVINLG NDF+ D+ + AY + + Y + IF GPM S P A R + E+ D R+HF++ P D GC HP+ + NE++++
Sbjct: 200 APPAPERRIEVIGDSISAGYG-IDGLNET--CPFTSATENNYLAYSALTARMLEADATIIAWSGRGVYRNYDGEAVEPMPEIYGRTIASEAQPAWDFSSWVPQVVVINLGTNDFSINVPGPATFDAPFKQAYAGLVETVRGHYP-EAHIFTTVGPMLSDSYPPDANALTRARTLITEVVDERTDGGDTRVHFVEFP-PHDGAVNGLGCDYHPSAKTNELMAE 416
BLAST of mRNA_S-firma_F_contig10221.345.1 vs. uniprot
Match: F0ZTA6_DICPU (Uncharacterized protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZTA6_DICPU) HSP 1 Score: 108 bits (271), Expect = 1.480e-24 Identity = 71/209 (33.97%), Postives = 104/209 (49.76%), Query Frame = 1
Query: 49 SRRVEWIGDSMTAGFGTLRGLEFTGSCPQADASSSNYYGFANMICRSIDADCRYIAWSGRGL---YVNNAGNKDVLLPDLWKQALGTTVKEVHDFSSWVPDGVVINLGQNDFNHEFKDS--VWDAAYIAFIREILAAYNNKPRIFCACGPMDHSSGGPAA-FCPNVIRIV--EQLDQEGIRIHFMDLQQPFDMRGCTRHPNFEDNEVIS 651
+R++E+IGDS+T G+G L T CP + +NY + +I R + A+ AWSG+G+ Y + +PDL+ L T DF + PD VVINLG ND++ + S V+ YI+F+ + + Y NKP F CGPM G P + NV IV +D EGI D GC HPN + + +++
Sbjct: 144 NRKIEFIGDSITCGYGDLG----TSPCPFTPDTENNYVTYGAIIARELQAELYLEAWSGKGVVRNYGSPTSTSTQTMPDLYPYILPTDTTTNWDFDLFQPDAVVINLGTNDYSTQPAPSQEVFQNGYISFVNSLKSNYPNKPEFFLVCGPM---IGQPCCQYVKNVSSIVGATYIDLEGILTS--------DDIGCNGHPNEQGHSIMA 337
BLAST of mRNA_S-firma_F_contig10221.345.1 vs. uniprot
Match: A0A2P6MSH3_9EUKA (Esterase, SGNH hydrolase-type n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6MSH3_9EUKA) HSP 1 Score: 110 bits (274), Expect = 1.960e-24 Identity = 70/204 (34.31%), Postives = 101/204 (49.51%), Query Frame = 1
Query: 52 RRVEWIGDSMTAGFGTLR-GLEFTGSCPQADASSSNYYGFANMICRSIDADCRYIAWSGRGLYVNNAGNKDVLLPDLWKQALGTTVKEVHDFSSWVPDGVVINLGQNDFNHEFKDSV--WDAAYIAFIREILAAYNNKPRIFCACGPMDHSSGGPAAFCPNVIRIVEQLDQEGIRIHFMDLQQPFDMRGCTRHPNFEDNEVISD 654
RR+E++GDS+T G+G + + +G+ P A S + + M + AD ++WSGRG+ N G ++P L+ Q LGT K +F SWVP VVINLG ND N S+ + A Y FI+++ A Y N +F CG M AFC V ++ + I + Q GC HPN N V++D
Sbjct: 171 RRIEFVGDSITCGYGVIPPSVPCSGNGPNG-AWESAFDNYVRMTATDLAADVTRVSWSGRGMVQNCCGLPPPVMPTLYNQTLGTDAKSKWNFKSWVPQAVVINLGTNDHNGNPAPSLDTFAAGYTQFIKDLRARYANVT-VFTLCGGMVEG-----AFCDAVSKVSSANGAHYVNIPALTSNQ----MGCDGHPNTYGNRVMAD 363
BLAST of mRNA_S-firma_F_contig10221.345.1 vs. uniprot
Match: A0A1S8M7G9_9CLOT (Endoglucanase E n=3 Tax=Clostridium TaxID=1485 RepID=A0A1S8M7G9_9CLOT) HSP 1 Score: 103 bits (257), Expect = 1.870e-22 Identity = 72/224 (32.14%), Postives = 112/224 (50.00%), Query Frame = 1
Query: 1 GFNGDAGLTAVAVTARSRRVEWIGDSMTAGFGTLRGLEFTGSCPQADASSSN-YYGFANMICRSIDADCRYIAWSGRGLYVNNAGNKDVLLPDLWKQALGTTVKEVHDFSSWVPDGVVINLGQNDFNHEFKD-SVWDAAYIAFIREILAAYNNKPRIFCACGPMDHSSGGPAA--FCPNVIRIVEQLDQEGIRIHFMD--LQQPFDMRGCTRHPNFEDNEVISD 654
GFN G A +R+ ++GDS+T G+G E T + N Y + + R I AD + WSG+GL N GN L+PDL+ + L + D S W+P VVINLG NDF+ D +V+ +AY+ FI +I Y K I+CA GPM + A + + + E L + ++HF++ +Q P + G HP + +E++++
Sbjct: 137 GFNVTEGKLLSAPKPSDKRIMFVGDSITCGYGN----EGTSQYQSFTTKNENAYLAYGAVTGRLIGADSETVCWSGKGLVRNYGGNTTDLMPDLYDRILPYNTTLLLDSSKWIPQVVVINLGTNDFSIGAPDKTVFTSAYLKFISKIRGQYP-KADIYCAVGPMLNGDNLTQARDYVKSTVDSEEALGDK--KVHFIEFPMQDPANGYGEDWHPTVKTHEIMAN 353
BLAST of mRNA_S-firma_F_contig10221.345.1 vs. uniprot
Match: UPI001746E6D3 (GDSL-type esterase/lipase family protein n=1 Tax=Paenibacillus sp. PR3 TaxID=2763503 RepID=UPI001746E6D3) HSP 1 Score: 101 bits (251), Expect = 8.670e-22 Identity = 61/166 (36.75%), Postives = 94/166 (56.63%), Query Frame = 1
Query: 1 GFNGDAGLTAVAVTAR-SRRVEWIGDSMTAGFGT-LRGLEFTGSCPQADASSSNYYGFANMICRSIDADCRYIAWSGRGLYVNNAGNKDVLLPDLWKQALGTTVKEVHDFSSWVPDGVVINLGQNDFNHEFKDSV-WDAAYIAFIREILAAYNNKPRIFCACGPMD 489
GF AG + AR R+++ IGDS+TAG+G G+E G P + + Y+ + ++ R+++A+ AWSG+G+Y N G +DV +P+L+ + L ++ D SW+PD VVINLG NDF+ + D V + Y F+ I +Y N I C GPM+
Sbjct: 109 GFELPAGTELLPPPARPQRKLQIIGDSITAGYGNEAAGIE-DGFKPSQE---NQYWAYGSITARNLNAELHITAWSGKGMYQNYGGERDVQMPELFLRTLPSSADSAWDLQSWIPDAVVINLGTNDFSVDSLDPVLYRHTYREFLGTIRNSYPNA-YILCTIGPMN 269
BLAST of mRNA_S-firma_F_contig10221.345.1 vs. uniprot
Match: L8HBE1_ACACA (GDSLlike lipase/acylhydrolase domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HBE1_ACACA) HSP 1 Score: 101 bits (251), Expect = 1.260e-21 Identity = 68/227 (29.96%), Postives = 111/227 (48.90%), Query Frame = 1
Query: 22 LTAVAVTAR-----SRRVEWIGDSMTAGFGTLRGLEFTGSCPQADASSSNYYGFANMICRSIDADCRYIAWSGRGLYVNNAGNKDVL----LPDLWKQALGTTVKEVHDFSSWVPDGVVINLGQNDFNHEFK--DSVWDAAYIAFIREILAAYNNK---PRIFCACGPMDHSSGGPAAFCPNVIRIVEQLDQEGIRIHFMDLQQ---PFDMRGCTRHPNFEDNEVIS 651
+ AV T R SRR+E++GDS++ G+G +E CP A+ ++ + ++I +S+ A+ WSGRG+ V N G+K++ P L+ + L T F W P VVINLG ND++ + +++ Y F+ I + Y P F ACGPM C V +V++ +G+ I ++D+Q P D GC HP+ + ++
Sbjct: 135 IPAVKATMRPKALESRRIEFVGDSISCGYG----IEGHPPCPFTAATENSGLTYGSLIAKSLSAELHLECWSGRGV-VRNYGDKNITSAEPFPSLFPRTLPTAHDSAWHFGVWTPQAVVINLGTNDYSTQPAPPQDIFEEGYQKFVEYIYSQYKGNHETPHFFLACGPMISQP-----CCSYVKNVVDKEKAKGVNITYIDMQHILSPED-HGCAGHPSVSGHRKMA 350
BLAST of mRNA_S-firma_F_contig10221.345.1 vs. uniprot
Match: A0A4P2Q6H1_SORCE (Endo-1,4-beta-glucanase n=1 Tax=Sorangium cellulosum TaxID=56 RepID=A0A4P2Q6H1_SORCE) HSP 1 Score: 101 bits (251), Expect = 2.830e-21 Identity = 69/217 (31.80%), Postives = 109/217 (50.23%), Query Frame = 1
Query: 43 ARSRRVEWIGDSMTAGFGTLRGLEFTGSCPQADASSSNYYGFANMICRSIDADCRYIAWSGRGLYVNNAGNKDVLLPDLWKQALGTTVKEVHDFSSWVPDGVVINLGQNDFNHEFKDSV-------WDAAYIAFIREILAAYNNKPRIFCACGPMDHSSGGPAAFCPNVIR-----IVEQLDQEGI-RIHFMDLQQP--FDMRGCTRHPNFEDNEVI 648
A RR+E IGDS++AG+G + G + T CP A+ +N+ + + R + AD IAWSGRG Y N A +P+L+ + L + DFSSWVP VVINLG NDF+ + KD + AY + + Y + IFC GPM + +R +VE ++G ++ +++ + + RGC HP+ + +++
Sbjct: 223 APDRRIEVIGDSISAGYG-VDGPDET--CPFTSATENNFLTYGPIAARQLGADATIIAWSGRGAYRNYADEAVPTMPELYGRTLPDEAQPAWDFSSWVPQVVVINLGTNDFSVD-KDGKGVNPGEPFREAYAGLVETVRTNYPDA-LIFCTVGPMLSDGYPEGTMALSTVRSYITQVVEDRTEDGDDKVRYLEFPEHDGTNGRGCDWHPSAKTQQLM 434
BLAST of mRNA_S-firma_F_contig10221.345.1 vs. uniprot
Match: U4R790_9FIRM (Cellulase n=3 Tax=Eubacteriales TaxID=186802 RepID=U4R790_9FIRM) HSP 1 Score: 101 bits (251), Expect = 3.050e-21 Identity = 73/234 (31.20%), Postives = 116/234 (49.57%), Query Frame = 1
Query: 1 GFNGDAGLTAVAVTARSRRVEWIGDSMTAGFGTLRGLEFTGSCPQADASSSN-YYGFANMICRSIDADCRYIAWSGRGLYVNNAGNKDVLLPDLWKQALGTTVKEVHDFSSWVPDGVVINLGQNDFNHEFKD-SVWDAAYIAFIREILAAYNNKPRIFCACGPMDHSSGGPAAFCPNVIR-IVEQLDQEG-IRIHFMDLQQPFDMRGCTR--HPNFEDNEVISDAYDGYMLNIL 684
GFN G A + +RR+E+IGDS+T G+G E T + + N Y + + R ++AD + WSG+GL N G+ + L+P ++ + L D S W+P VVINLG NDF+ D + + AY F+ +I Y + I+CA GPM S A C + I +V+Q G ++IHF++ + G HP+ + + +++D + N L
Sbjct: 231 GFNVTGGGLLPAPSPSTRRIEFIGDSITCGYGN----EGTSQYQSFTSKNENAYMAYGAITARLLNADPVTVCWSGKGLVQNYGGDLNDLMPAVYSRVLPYNTTLTWDTSKWIPQVVVINLGTNDFSTGSIDKTTFATAYANFVTKIRGQYPDA-HIYCAVGPM--LSWDQLAKCKDAITSVVDQKKTSGDLKIHFIEFPVQVESNGYGEDWHPSIKTHGLMADQLAATIKNDL 457
BLAST of mRNA_S-firma_F_contig10221.345.1 vs. uniprot
Match: S4Y3M0_SORCE (Uncharacterized protein n=5 Tax=Sorangium cellulosum TaxID=56 RepID=S4Y3M0_SORCE) HSP 1 Score: 100 bits (249), Expect = 4.690e-21 Identity = 73/223 (32.74%), Postives = 110/223 (49.33%), Query Frame = 1
Query: 43 ARSRRVEWIGDSMTAGFGTLRGLEFTGSCPQADASSSNYYGFANMICRSIDADCRYIAWSGRGLYVNNAGNKDVLLPDLWKQALGTTVKEVHDFSSWVPDGVVINLGQNDFNHEFKDSV-----WDAAYIAFIREILAAYNNKPRIFCACGPMDHSSGGPAAFCPNVIR-----IVEQLDQEGI-RIHFMDL---QQPFDMRGCTRHPNFEDN----EVISDA 657
A RR+E IGDS++AG+G + G + T C + +NY +++MI R ++AD +AWSGRG+ N G +P+++ + + + DFSSWVP VVINLG NDF+ D + AY + + Y + IFC GPM S A + R +VE G R+ F++ + D GC HP+ + N E ++DA
Sbjct: 205 APERRIEVIGDSISAGYG-IDGADET--CKFTSDTENNYLAYSSMIGRLLEADTTIVAWSGRGVVRNYDGEAVPTMPEIYGRTIADEAQPAWDFSSWVPQVVVINLGTNDFSINVPDDAQFREPFTNAYEGLVDTVRENYP-EAYIFCTIGPMLSDSFPEGAEALSRARDYIGQVVEDRTAGGDDRVRFLEFPPHDKATDGLGCDWHPSAKKNRDMAEQLADA 423 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10221.345.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10221.345.1 >prot_S-firma_F_contig10221.345.1 ID=prot_S-firma_F_contig10221.345.1|Name=mRNA_S-firma_F_contig10221.345.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=228bp GFNGDAGLTAVAVTARSRRVEWIGDSMTAGFGTLRGLEFTGSCPQADASSback to top mRNA from alignment at S-firma_F_contig10221:4666..5349- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10221.345.1 ID=mRNA_S-firma_F_contig10221.345.1|Name=mRNA_S-firma_F_contig10221.345.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=684bp|location=Sequence derived from alignment at S-firma_F_contig10221:4666..5349- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10221:4666..5349- >mRNA_S-firma_F_contig10221.345.1 ID=mRNA_S-firma_F_contig10221.345.1|Name=mRNA_S-firma_F_contig10221.345.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1368bp|location=Sequence derived from alignment at S-firma_F_contig10221:4666..5349- (Sphaerotrichia firma ET2_F female)back to top |