mRNA_S-firma_F_contig10201.320.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10201.320.1 vs. uniprot
Match: D7FN88_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN88_ECTSI) HSP 1 Score: 491 bits (1263), Expect = 3.160e-162 Identity = 246/282 (87.23%), Postives = 260/282 (92.20%), Query Frame = 1
Query: 1 KQVRGHLARRQFLLVVEGAQQQEDERKRQKLLMEMDYEAQLPIYQRSMRVCYRFSTGVTEAGKLFDAFVATLILLNVAAVIAESEPSLGGRAGSSDGRFQAFFDGFEAFSVLVFTAEISMRLFIAPISSRYSFSRWTYLSSFFGFIDVASIAPWYIEAVLRSSGVYFDASAFRVLRLFRILQLEHFVSAFSLLDDVWTASRDTLAATGLLALVVWVGSACLFYLFEKDNACTGSAFSSIPDAMFYTAVFLGGEWAQVDFTWPGKVLCCVLCVFGIVLFGIPV 846
+QVRGHLARRQF LVVEGAQQQE RKRQK LME+DYEA LP+Y RSMR+CYRFSTGVTEAGKLFD FVA LILLNV AVIAESEPSLGG G S+GRFQ FFDGFEAFSVLVFTAEISMRLFIAPISS+Y+FSRW YLSSFFG +DVASIAPWYIE +L S+GVYFDAS FRVLRLFRILQLEHFVSAFSLLDDVWTAS+DTLAATGLLALVVWVGSA LFYLFEKDN CTG AFSSIPDAMFYTAVFLGGEW+++DFTW GKVLCCVLCVFGIVLFGIPV
Sbjct: 882 RQVRGHLARRQFHLVVEGAQQQEXXRKRQKRLMELDYEAHLPVYDRSMRICYRFSTGVTEAGKLFDGFVAVLILLNVVAVIAESEPSLGGTGGPSEGRFQTFFDGFEAFSVLVFTAEISMRLFIAPISSKYAFSRWKYLSSFFGVVDVASIAPWYIETILWSAGVYFDASVFRVLRLFRILQLEHFVSAFSLLDDVWTASKDTLAATGLLALVVWVGSAFLFYLFEKDNMCTGEAFSSIPDAMFYTAVFLGGEWSEIDFTWAGKVLCCVLCVFGIVLFGIPV 1163
BLAST of mRNA_S-firma_F_contig10201.320.1 vs. uniprot
Match: A0A836CDK7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDK7_9STRA) HSP 1 Score: 249 bits (636), Expect = 7.150e-72 Identity = 136/282 (48.23%), Postives = 181/282 (64.18%), Query Frame = 1
Query: 7 VRGHLARRQFLLVVEGAQQQEDERKRQKLLMEMDYEAQLPIYQRSMRVCYRFSTGVTEAGKLFDAFVATLILLNVAAVIAESEPSLGGRAGSSDGRFQAFFDGFEAFSVLVFTAEISMRLFIAPISSRYSFSRWTYLSSFFGFIDVASIAPWYIEAVLRSSGVYFDASAFRVLRLFRILQLEHFVSAFSLLDDVWTASRDTLAATGLLALVVWVGSACLFYLFEKDNACTG--SAFSSIPDAMFYTAVFLGGEWAQVDFTWPGKVLCCVLCVFGIVLFGIPV 846
+RGHLAR +F VEGA + + ER+ M + +L + R + RF G T G+ + +A LI +N AV+ ESEPS+G S + Q FD EAFSV +FT + RL AP+++ Y + YL+SFFG +D+ASI PWYI+ +L S+GV FDA FR+LRLFR+LQLE V+AF+LLDDVW ++ L A GLLA +VWVGSA LF+L E+ N C G AF IP +M+YT +FLGGEW +DFT G+++CC C+ GI LF IPV
Sbjct: 900 IRGHLARMRFRAAVEGAAKLQQERQ----AMLTARKQRLSGWVRFQKALLRFVQGNTHWGEWYLRLIALLIAVNCIAVVLESEPSIG---ESDNPIVQPLFDAVEAFSVAIFTFDFVARLCTAPVNASYG-TPLNYLTSFFGIVDMASILPWYIQEILVSAGVVFDAGPFRILRLFRLLQLERHVNAFTLLDDVWRGAKGVLKAAGLLAFIVWVGSATLFFLTEQRNECEGVREAFVDIPSSMYYTGIFLGGEWGLIDFTGLGRIVCCFTCIMGIALFAIPV 1173
BLAST of mRNA_S-firma_F_contig10201.320.1 vs. uniprot
Match: A0A812X110_9DINO (Shal protein n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812X110_9DINO) HSP 1 Score: 222 bits (566), Expect = 3.130e-62 Identity = 114/230 (49.57%), Postives = 154/230 (66.96%), Query Frame = 1
Query: 157 RFSTGVTEAGKLFDAFVATLILLNVAAVIAESEPSLGGRAGSSDGRFQAFFDGFEAFSVLVFTAEISMRLFIAPISSRYSFSRWTYLSSFFGFIDVASIAPWYIEAVLRSSGVYFDASAFRVLRLFRILQLEHFVSAFSLLDDVWTASRDTLAATGLLALVVWVGSACLFYLFEKDNACTGSAFSSIPDAMFYTAVFLGGEWAQVDFTWPGKVLCCVLCVFGIVLFGIPV 846
+F T AG+L + LI+LNV AVIAES + AGS +GFE FSVLVFT E S ++ AP +SRY F R Y+ SFFG +D+ ++AP++I+ V+ SG+ F+A FR+ RL RILQLE FV +F+LLDD W + R+T+ ATG +AL+VW+ A LFY FE+DN AF +P +M++T +FLGGEWA +DFT GK++C V CV GI L+GIP+
Sbjct: 1607 KFLEQKTTAGRLCKKAMFLLIILNVLAVIAESMSWVKEAAGSY------VLNGFELFSVLVFTFEYSANVWSAPANSRYMFCRRNYVCSFFGIVDLVTVAPFWIQTVMWLSGLQFNAFVFRIARLLRILQLEDFVESFTLLDDAWRSCRETMVATGFMALLVWICGAVLFYEFEQDNPAMDGAFKDLPSSMYFTIIFLGGEWAMIDFTSGGKIVCLVYCVVGIGLYGIPI 1830
BLAST of mRNA_S-firma_F_contig10201.320.1 vs. uniprot
Match: A0A7S1DR60_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DR60_HEMAN) HSP 1 Score: 203 bits (517), Expect = 1.750e-58 Identity = 109/223 (48.88%), Postives = 140/223 (62.78%), Query Frame = 1
Query: 178 EAGKLFDAFVATLILLNVAAVIAESEPSLGGRAGSSDGRFQAFFDGFEAFSVLVFTAEISMRLFIAPISSRYSFSRWTYLSSFFGFIDVASIAPWYIEAVLRSSGVYFDASAFRVLRLFRILQLEHFVSAFSLLDDVWTASRDTLAATGLLALVVWVGSACLFYLFEKDNACTGSAFSSIPDAMFYTAVFLGGEWAQVDFTWPGKVLCCVLCVFGIVLFGIPV 846
+ G FD F LI +V V+ ES+PS + A FD E + +V+T E MRL AP R +S YL+SFFG D ++ P+YIE G D +A RVLRLFRILQLEHF AF+L+DDV+ +DTL AT LA+++WVG+A F++ EK N G AF +IP++M+YTA+FL GEW QVDFT PGKV+CCVL V GI L+ IPV
Sbjct: 262 DNGVWFDRFNLALIAASVGCVVLESDPSYAS--------WSASFDSLELIATVVYTLEYFMRLAAAPHDRRAGYSVRGYLTSFFGTADFVALLPYYIERGALMYGRPADFAAIRVLRLFRILQLEHFTEAFTLIDDVFRQCKDTLVATSFLAVIIWVGAAYAFFVTEKGNPNVGGAFDNIPNSMYYTAIFLSGEWGQVDFTLPGKVICCVLVVAGIGLYSIPV 476
BLAST of mRNA_S-firma_F_contig10201.320.1 vs. uniprot
Match: A0A7S0XQ15_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0XQ15_HEMAN) HSP 1 Score: 189 bits (481), Expect = 1.590e-56 Identity = 96/180 (53.33%), Postives = 122/180 (67.78%), Query Frame = 1
Query: 307 FDGFEAFSVLVFTAEISMRLFIAPISSRYSFSRWTYLSSFFGFIDVASIAPWYIEAVLRSSGVYFDASAFRVLRLFRILQLEHFVSAFSLLDDVWTASRDTLAATGLLALVVWVGSACLFYLFEKDNACTGSAFSSIPDAMFYTAVFLGGEWAQVDFTWPGKVLCCVLCVFGIVLFGIPV 846
FD E + +V+T E MRL AP R +S YL+SFFG D ++ P+YIE G D +A RVLRLFRILQLEHF AF+L+DDV+ +DTL AT LA+++WVG+A F++ EK N G AF +IP++M+YTA+FL GEW QVDFT PGKV+CCVL V GI L+ IPV
Sbjct: 1 FDSLELVATVVYTLEYFMRLAAAPHDRRAGYSVRGYLTSFFGTADFVALLPYYIERGALMYGRPADFAAIRVLRLFRILQLEHFTEAFTLIDDVFRQCKDTLVATSFLAVIIWVGAAYAFFVTEKGNPNVGGAFDNIPNSMYYTAIFLSGEWGQVDFTLPGKVICCVLVVAGIGLYSIPV 180
BLAST of mRNA_S-firma_F_contig10201.320.1 vs. uniprot
Match: A0A7S1VPC1_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VPC1_9STRA) HSP 1 Score: 199 bits (505), Expect = 4.080e-54 Identity = 110/265 (41.51%), Postives = 149/265 (56.23%), Query Frame = 1
Query: 175 TEAGKLFDAFVATLILLNVAAVIAESEPSLGGRAGSSDGRFQAFFDGFEAFSVLVFTAEISMRLFIAPISSRYSFSRWTYLSSFFGFIDVASIAPWYIEAVLRSSGVYFDAS----AFRVLRLFRILQLEHFVSAFSLLDDVWTASRDTLAATGLLALVVWVGSACLFYLFEKDNA-------------------------------------CTGSAFSSIPDAMFYTAVFLGGEWAQVDFTWPGKVLCCVLCVFGIVLFGIPV 846
T + F+ T+I+LNV AV+ ES P + G+ G F FD FE FSV+VF E ++RLF AP + +S + Y ++FFG +D S APW+IE L SGV + FRV LQLE FV AFS+LD+V+ AS+D ATGLLA+++WVG A LFY+FE++N C AF++IP+A+++TAVFLGGEW +DFTWPG+ +C LCV GI L+ IP+
Sbjct: 982 TPFARFSRIFIFTVIILNVVAVLVESVPEVDRAVGNQPGNF---FDTFEFFSVVVFATEYALRLFCAPKNRNALYSSFIYATTFFGIVDFLSTAPWFIEQALIHSGVISEGGDSVMVFRVXXXXXXLQLEDFVVAFSMLDNVFRASKDVFKATGLLAVIIWVGCAALFYIFEENNPNWRSCDSSVPAHTEDPDFPGCYDFPSTSACNEVYDGLCEQKAFTNIPNALYFTAVFLGGEWGVIDFTWPGRFVCLFLCVAGIGLYAIPI 1243
BLAST of mRNA_S-firma_F_contig10201.320.1 vs. uniprot
Match: A0A7S2U8P7_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U8P7_9STRA) HSP 1 Score: 188 bits (477), Expect = 1.360e-53 Identity = 111/274 (40.51%), Postives = 151/274 (55.11%), Query Frame = 1
Query: 166 TGVTEAGKLFDAFVATLILLNVAAVIAESEPSLGGRAGSSDGRFQAFFDGFEAFSVLVFTAEISMRLFIAPISSRYSFSRWTYLSSFFGFIDVASIAPWYIEAVLRSSGVYFDASA-----FRVLRLFRILQLEHFVSAFSLLDDVWTASRDTLAATGLLALVVWVGSACLFYLFEKDNA------------------------------------------CTGSAFSSIPDAMFYTAVFLGGEWAQVDFTWPGKVLCCVLCVFGIVLFGIPV 846
T + AG++F + T+I+ NV AVI ES P + G+ G F FD FE SVL+F AE MRLF AP + FS W Y ++FFG +D+ S APW++E L SG + D+S FR LQLE F+ AFS LD+V+ AS+D L ATGL+AL++WVG LF++FE++N C F+++P+A+++TAVFL GEW VDFTWPG+++C LCV GI L+ IPV
Sbjct: 96 TNKSFAGRVF---IFTVIITNVLAVIFESIPEVDKAVGNQAGNF---FDVFEMCSVLIFAAEYLMRLFCAPKNRGALFSTWVYATTFFGIVDLLSTAPWFVEEALIYSG-HLDSSGDNAKIFRXXXXXXXLQLEDFMVAFSKLDNVFRASKDVLKATGLMALIIWVGCGALFFIFEENNPNWRSCDSSIPLMTGGDDSNYTDAPGCYDFESTRACNEFYPGMCDQVVFTNVPNALYFTAVFLVGEWGVVDFTWPGRLICLFLCVAGIALYAIPV 362
BLAST of mRNA_S-firma_F_contig10201.320.1 vs. uniprot
Match: A0A7S1GK10_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GK10_CYCTE) HSP 1 Score: 192 bits (487), Expect = 1.440e-52 Identity = 112/265 (42.26%), Postives = 148/265 (55.85%), Query Frame = 1
Query: 184 GKLFDAFVATLILLNVAAVIAESEPSLGGRAGSSDGRFQAFFDGFEAFSVLVFTAEISMRLFIAPISSRYSFSRWTYLSSFFGFIDVASIAPWYIEAVLRSSGVYFD--------ASAFRVLRLFRILQLEHFVSAFSLLDDVWTASRDTLAATGLLALVVWVGSACLFYLFEKDNA-------------------------------------CTGSAFSSIPDAMFYTAVFLGGEWAQVDFTWPGKVLCCVLCVFGIVLFGIP 843
G +F + +I+LNV AVIAES P + G+ G F FD FE SV+ F E +RLF AP + +S + Y ++FFG +D S P++IE L +YF+ A FRV R+FR+LQLE F+ AFS LD+V+ AS D L ATGLLALV+WVG LFY+FE++N C AF++IP++++YTAVFLGGEW VDFTWPG+ +C LCV GI L+ IP
Sbjct: 428 GYVFSISMFNIIVLNVLAVIAESIPEVDRAVGNQPGNF---FDVFELISVIFFATEYMLRLFCAPKNKAALYSSFIYATTFFGIVDFLSTVPYFIEHAL----IYFNVIQAGSDAAMMFRVFRIFRLLQLEGFIVAFSKLDNVFRASMDVLKATGLLALVIWVGCGSLFYIFEQNNPNFRSCDDSIPTHSTDSSTPGCFDFHTTEECNDVYPGMCKQVAFTNIPNSLYYTAVFLGGEWGLVDFTWPGRFVCLFLCVAGIGLYAIP 685
BLAST of mRNA_S-firma_F_contig10201.320.1 vs. uniprot
Match: A0A7S0FML1_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FML1_9STRA) HSP 1 Score: 191 bits (484), Expect = 5.230e-52 Identity = 104/259 (40.15%), Postives = 143/259 (55.21%), Query Frame = 1
Query: 187 KLFDAFVATLILLNVAAVIAESEPSLGGRAGSSDGRFQAFFDGFEAFSVLVFTAEISMRLFIAPISSRYSFSRWTYLSSFFGFIDVASIAPWYIEAVLRSSGVYFD---ASAFRVLRLFRILQLEHFVSAFSLLDDVWTASRDTLAATGLLALVVWVGSACLFYLFEKDNA------------------------------------CTGSAFSSIPDAMFYTAVFLGGEWAQVDFTWPGKVLCCVLCVFGIVLFGIPV 846
+ F F+ +LI+ NV AV+ E+ P + G+ G F FD FEA S+ FT E +R+F A + +S W Y ++FFG +D S APWY+E +L SG+ A+ FRV LQLE F+ F +D+V+ ASRD L ATGL+A+++WVG LF++FE+ N C S+FSS+PD++FY AVFLGGEW VDFTW G+++C LCV GI L+ IPV
Sbjct: 476 RFFRVFMMSLIVSNVIAVLLETVPEIDKYVGNQPGNF---FDSFEAVSIFFFTLEYGLRVFSARKNLEALYSPWVYCTTFFGIVDFLSTAPWYVEQILLLSGIAESNDTATIFRVXXXXXXLQLEDFLVGFRKIDNVFRASRDVLKATGLMAVIIWVGCGALFFIFEQSNPNFRQCDVSIPLRTKHDTGCYDFESTAACEAYYGDGMCVQSSFSSMPDSLFYVAVFLGGEWGLVDFTWGGRMVCMFLCVIGIALYAIPV 731
BLAST of mRNA_S-firma_F_contig10201.320.1 vs. uniprot
Match: A0A7R9WS76_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WS76_9STRA) HSP 1 Score: 184 bits (467), Expect = 8.080e-52 Identity = 106/271 (39.11%), Postives = 149/271 (54.98%), Query Frame = 1
Query: 163 STGVTE---AGKLFDAFVATLILLNVAAVIAESEPSLGGRAGSSDGRFQAFFDGFEAFSVLVFTAEISMRLFIAPISSRYSFSRWTYLSSFFGFIDVASIAPWYIEAVLRSSGVYF----DASAFRVLRLFRILQLEHFVSAFSLLDDVWTASRDTLAATGLLALVVWVGSACLFYLFEKDNA-------------------------------------CTGSAFSSIPDAMFYTAVFLGGEWAQVDFTWPGKVLCCVLCVFGIVLFGIP 843
+ GVT K+ F+ +I+LNV AV+AES P++ G++ G FD FEAFSV+VF E + RLF AP + +S Y ++FFG +D S APW++E L +G +A FR LQLE F+ AFS LD+V+ AS++ L ATGL+AL++WVG LFY+FE++N C F+++P++++ TAVFLGGEW VDFTWPG+++C LCV GI L+ IP
Sbjct: 130 AAGVTRWTLTAKISRTFIFIVIILNVGAVLAESIPAVDQAVGNARGNV---FDAFEAFSVVVFAMEYAARLFSAPKNREALYSSTVYATTFFGIVDFLSTAPWFVEQGLIHTGSLSRNDDNARIFRXXXXXXXLQLEDFIVAFSKLDNVFRASKNILKATGLMALIIWVGCGALFYIFEENNPNWRSCDDSIPQFSVEEGTPGCYDFNSTAACNAYYPDMCDQKVFTNMPNSLYLTAVFLGGEWGVVDFTWPGRIVCLFLCVVGIGLYAIP 397 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10201.320.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10201.320.1 >prot_S-firma_F_contig10201.320.1 ID=prot_S-firma_F_contig10201.320.1|Name=mRNA_S-firma_F_contig10201.320.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=282bp KQVRGHLARRQFLLVVEGAQQQEDERKRQKLLMEMDYEAQLPIYQRSMRVback to top mRNA from alignment at S-firma_F_contig10201:729..5046- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10201.320.1 ID=mRNA_S-firma_F_contig10201.320.1|Name=mRNA_S-firma_F_contig10201.320.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=4318bp|location=Sequence derived from alignment at S-firma_F_contig10201:729..5046- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10201:729..5046- >mRNA_S-firma_F_contig10201.320.1 ID=mRNA_S-firma_F_contig10201.320.1|Name=mRNA_S-firma_F_contig10201.320.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1692bp|location=Sequence derived from alignment at S-firma_F_contig10201:729..5046- (Sphaerotrichia firma ET2_F female)back to top |