mRNA_S-firma_F_contig10201.320.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig10201.320.1
Unique NamemRNA_S-firma_F_contig10201.320.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
BLAST of mRNA_S-firma_F_contig10201.320.1 vs. uniprot
Match: D7FN88_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN88_ECTSI)

HSP 1 Score: 491 bits (1263), Expect = 3.160e-162
Identity = 246/282 (87.23%), Postives = 260/282 (92.20%), Query Frame = 1
Query:    1 KQVRGHLARRQFLLVVEGAQQQEDERKRQKLLMEMDYEAQLPIYQRSMRVCYRFSTGVTEAGKLFDAFVATLILLNVAAVIAESEPSLGGRAGSSDGRFQAFFDGFEAFSVLVFTAEISMRLFIAPISSRYSFSRWTYLSSFFGFIDVASIAPWYIEAVLRSSGVYFDASAFRVLRLFRILQLEHFVSAFSLLDDVWTASRDTLAATGLLALVVWVGSACLFYLFEKDNACTGSAFSSIPDAMFYTAVFLGGEWAQVDFTWPGKVLCCVLCVFGIVLFGIPV 846
            +QVRGHLARRQF LVVEGAQQQE  RKRQK LME+DYEA LP+Y RSMR+CYRFSTGVTEAGKLFD FVA LILLNV AVIAESEPSLGG  G S+GRFQ FFDGFEAFSVLVFTAEISMRLFIAPISS+Y+FSRW YLSSFFG +DVASIAPWYIE +L S+GVYFDAS FRVLRLFRILQLEHFVSAFSLLDDVWTAS+DTLAATGLLALVVWVGSA LFYLFEKDN CTG AFSSIPDAMFYTAVFLGGEW+++DFTW GKVLCCVLCVFGIVLFGIPV
Sbjct:  882 RQVRGHLARRQFHLVVEGAQQQEXXRKRQKRLMELDYEAHLPVYDRSMRICYRFSTGVTEAGKLFDGFVAVLILLNVVAVIAESEPSLGGTGGPSEGRFQTFFDGFEAFSVLVFTAEISMRLFIAPISSKYAFSRWKYLSSFFGVVDVASIAPWYIETILWSAGVYFDASVFRVLRLFRILQLEHFVSAFSLLDDVWTASKDTLAATGLLALVVWVGSAFLFYLFEKDNMCTGEAFSSIPDAMFYTAVFLGGEWSEIDFTWAGKVLCCVLCVFGIVLFGIPV 1163          
BLAST of mRNA_S-firma_F_contig10201.320.1 vs. uniprot
Match: A0A836CDK7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDK7_9STRA)

HSP 1 Score: 249 bits (636), Expect = 7.150e-72
Identity = 136/282 (48.23%), Postives = 181/282 (64.18%), Query Frame = 1
Query:    7 VRGHLARRQFLLVVEGAQQQEDERKRQKLLMEMDYEAQLPIYQRSMRVCYRFSTGVTEAGKLFDAFVATLILLNVAAVIAESEPSLGGRAGSSDGRFQAFFDGFEAFSVLVFTAEISMRLFIAPISSRYSFSRWTYLSSFFGFIDVASIAPWYIEAVLRSSGVYFDASAFRVLRLFRILQLEHFVSAFSLLDDVWTASRDTLAATGLLALVVWVGSACLFYLFEKDNACTG--SAFSSIPDAMFYTAVFLGGEWAQVDFTWPGKVLCCVLCVFGIVLFGIPV 846
            +RGHLAR +F   VEGA + + ER+     M    + +L  + R  +   RF  G T  G+ +   +A LI +N  AV+ ESEPS+G    S +   Q  FD  EAFSV +FT +   RL  AP+++ Y  +   YL+SFFG +D+ASI PWYI+ +L S+GV FDA  FR+LRLFR+LQLE  V+AF+LLDDVW  ++  L A GLLA +VWVGSA LF+L E+ N C G   AF  IP +M+YT +FLGGEW  +DFT  G+++CC  C+ GI LF IPV
Sbjct:  900 IRGHLARMRFRAAVEGAAKLQQERQ----AMLTARKQRLSGWVRFQKALLRFVQGNTHWGEWYLRLIALLIAVNCIAVVLESEPSIG---ESDNPIVQPLFDAVEAFSVAIFTFDFVARLCTAPVNASYG-TPLNYLTSFFGIVDMASILPWYIQEILVSAGVVFDAGPFRILRLFRLLQLERHVNAFTLLDDVWRGAKGVLKAAGLLAFIVWVGSATLFFLTEQRNECEGVREAFVDIPSSMYYTGIFLGGEWGLIDFTGLGRIVCCFTCIMGIALFAIPV 1173          
BLAST of mRNA_S-firma_F_contig10201.320.1 vs. uniprot
Match: A0A812X110_9DINO (Shal protein n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812X110_9DINO)

HSP 1 Score: 222 bits (566), Expect = 3.130e-62
Identity = 114/230 (49.57%), Postives = 154/230 (66.96%), Query Frame = 1
Query:  157 RFSTGVTEAGKLFDAFVATLILLNVAAVIAESEPSLGGRAGSSDGRFQAFFDGFEAFSVLVFTAEISMRLFIAPISSRYSFSRWTYLSSFFGFIDVASIAPWYIEAVLRSSGVYFDASAFRVLRLFRILQLEHFVSAFSLLDDVWTASRDTLAATGLLALVVWVGSACLFYLFEKDNACTGSAFSSIPDAMFYTAVFLGGEWAQVDFTWPGKVLCCVLCVFGIVLFGIPV 846
            +F    T AG+L    +  LI+LNV AVIAES   +   AGS         +GFE FSVLVFT E S  ++ AP +SRY F R  Y+ SFFG +D+ ++AP++I+ V+  SG+ F+A  FR+ RL RILQLE FV +F+LLDD W + R+T+ ATG +AL+VW+  A LFY FE+DN     AF  +P +M++T +FLGGEWA +DFT  GK++C V CV GI L+GIP+
Sbjct: 1607 KFLEQKTTAGRLCKKAMFLLIILNVLAVIAESMSWVKEAAGSY------VLNGFELFSVLVFTFEYSANVWSAPANSRYMFCRRNYVCSFFGIVDLVTVAPFWIQTVMWLSGLQFNAFVFRIARLLRILQLEDFVESFTLLDDAWRSCRETMVATGFMALLVWICGAVLFYEFEQDNPAMDGAFKDLPSSMYFTIIFLGGEWAMIDFTSGGKIVCLVYCVVGIGLYGIPI 1830          
BLAST of mRNA_S-firma_F_contig10201.320.1 vs. uniprot
Match: A0A7S1DR60_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DR60_HEMAN)

HSP 1 Score: 203 bits (517), Expect = 1.750e-58
Identity = 109/223 (48.88%), Postives = 140/223 (62.78%), Query Frame = 1
Query:  178 EAGKLFDAFVATLILLNVAAVIAESEPSLGGRAGSSDGRFQAFFDGFEAFSVLVFTAEISMRLFIAPISSRYSFSRWTYLSSFFGFIDVASIAPWYIEAVLRSSGVYFDASAFRVLRLFRILQLEHFVSAFSLLDDVWTASRDTLAATGLLALVVWVGSACLFYLFEKDNACTGSAFSSIPDAMFYTAVFLGGEWAQVDFTWPGKVLCCVLCVFGIVLFGIPV 846
            + G  FD F   LI  +V  V+ ES+PS           + A FD  E  + +V+T E  MRL  AP   R  +S   YL+SFFG  D  ++ P+YIE      G   D +A RVLRLFRILQLEHF  AF+L+DDV+   +DTL AT  LA+++WVG+A  F++ EK N   G AF +IP++M+YTA+FL GEW QVDFT PGKV+CCVL V GI L+ IPV
Sbjct:  262 DNGVWFDRFNLALIAASVGCVVLESDPSYAS--------WSASFDSLELIATVVYTLEYFMRLAAAPHDRRAGYSVRGYLTSFFGTADFVALLPYYIERGALMYGRPADFAAIRVLRLFRILQLEHFTEAFTLIDDVFRQCKDTLVATSFLAVIIWVGAAYAFFVTEKGNPNVGGAFDNIPNSMYYTAIFLSGEWGQVDFTLPGKVICCVLVVAGIGLYSIPV 476          
BLAST of mRNA_S-firma_F_contig10201.320.1 vs. uniprot
Match: A0A7S0XQ15_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0XQ15_HEMAN)

HSP 1 Score: 189 bits (481), Expect = 1.590e-56
Identity = 96/180 (53.33%), Postives = 122/180 (67.78%), Query Frame = 1
Query:  307 FDGFEAFSVLVFTAEISMRLFIAPISSRYSFSRWTYLSSFFGFIDVASIAPWYIEAVLRSSGVYFDASAFRVLRLFRILQLEHFVSAFSLLDDVWTASRDTLAATGLLALVVWVGSACLFYLFEKDNACTGSAFSSIPDAMFYTAVFLGGEWAQVDFTWPGKVLCCVLCVFGIVLFGIPV 846
            FD  E  + +V+T E  MRL  AP   R  +S   YL+SFFG  D  ++ P+YIE      G   D +A RVLRLFRILQLEHF  AF+L+DDV+   +DTL AT  LA+++WVG+A  F++ EK N   G AF +IP++M+YTA+FL GEW QVDFT PGKV+CCVL V GI L+ IPV
Sbjct:    1 FDSLELVATVVYTLEYFMRLAAAPHDRRAGYSVRGYLTSFFGTADFVALLPYYIERGALMYGRPADFAAIRVLRLFRILQLEHFTEAFTLIDDVFRQCKDTLVATSFLAVIIWVGAAYAFFVTEKGNPNVGGAFDNIPNSMYYTAIFLSGEWGQVDFTLPGKVICCVLVVAGIGLYSIPV 180          
BLAST of mRNA_S-firma_F_contig10201.320.1 vs. uniprot
Match: A0A7S1VPC1_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VPC1_9STRA)

HSP 1 Score: 199 bits (505), Expect = 4.080e-54
Identity = 110/265 (41.51%), Postives = 149/265 (56.23%), Query Frame = 1
Query:  175 TEAGKLFDAFVATLILLNVAAVIAESEPSLGGRAGSSDGRFQAFFDGFEAFSVLVFTAEISMRLFIAPISSRYSFSRWTYLSSFFGFIDVASIAPWYIEAVLRSSGVYFDAS----AFRVLRLFRILQLEHFVSAFSLLDDVWTASRDTLAATGLLALVVWVGSACLFYLFEKDNA-------------------------------------CTGSAFSSIPDAMFYTAVFLGGEWAQVDFTWPGKVLCCVLCVFGIVLFGIPV 846
            T   +    F+ T+I+LNV AV+ ES P +    G+  G F   FD FE FSV+VF  E ++RLF AP +    +S + Y ++FFG +D  S APW+IE  L  SGV  +       FRV      LQLE FV AFS+LD+V+ AS+D   ATGLLA+++WVG A LFY+FE++N                                      C   AF++IP+A+++TAVFLGGEW  +DFTWPG+ +C  LCV GI L+ IP+
Sbjct:  982 TPFARFSRIFIFTVIILNVVAVLVESVPEVDRAVGNQPGNF---FDTFEFFSVVVFATEYALRLFCAPKNRNALYSSFIYATTFFGIVDFLSTAPWFIEQALIHSGVISEGGDSVMVFRVXXXXXXLQLEDFVVAFSMLDNVFRASKDVFKATGLLAVIIWVGCAALFYIFEENNPNWRSCDSSVPAHTEDPDFPGCYDFPSTSACNEVYDGLCEQKAFTNIPNALYFTAVFLGGEWGVIDFTWPGRFVCLFLCVAGIGLYAIPI 1243          
BLAST of mRNA_S-firma_F_contig10201.320.1 vs. uniprot
Match: A0A7S2U8P7_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U8P7_9STRA)

HSP 1 Score: 188 bits (477), Expect = 1.360e-53
Identity = 111/274 (40.51%), Postives = 151/274 (55.11%), Query Frame = 1
Query:  166 TGVTEAGKLFDAFVATLILLNVAAVIAESEPSLGGRAGSSDGRFQAFFDGFEAFSVLVFTAEISMRLFIAPISSRYSFSRWTYLSSFFGFIDVASIAPWYIEAVLRSSGVYFDASA-----FRVLRLFRILQLEHFVSAFSLLDDVWTASRDTLAATGLLALVVWVGSACLFYLFEKDNA------------------------------------------CTGSAFSSIPDAMFYTAVFLGGEWAQVDFTWPGKVLCCVLCVFGIVLFGIPV 846
            T  + AG++F   + T+I+ NV AVI ES P +    G+  G F   FD FE  SVL+F AE  MRLF AP +    FS W Y ++FFG +D+ S APW++E  L  SG + D+S      FR       LQLE F+ AFS LD+V+ AS+D L ATGL+AL++WVG   LF++FE++N                                           C    F+++P+A+++TAVFL GEW  VDFTWPG+++C  LCV GI L+ IPV
Sbjct:   96 TNKSFAGRVF---IFTVIITNVLAVIFESIPEVDKAVGNQAGNF---FDVFEMCSVLIFAAEYLMRLFCAPKNRGALFSTWVYATTFFGIVDLLSTAPWFVEEALIYSG-HLDSSGDNAKIFRXXXXXXXLQLEDFMVAFSKLDNVFRASKDVLKATGLMALIIWVGCGALFFIFEENNPNWRSCDSSIPLMTGGDDSNYTDAPGCYDFESTRACNEFYPGMCDQVVFTNVPNALYFTAVFLVGEWGVVDFTWPGRLICLFLCVAGIALYAIPV 362          
BLAST of mRNA_S-firma_F_contig10201.320.1 vs. uniprot
Match: A0A7S1GK10_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GK10_CYCTE)

HSP 1 Score: 192 bits (487), Expect = 1.440e-52
Identity = 112/265 (42.26%), Postives = 148/265 (55.85%), Query Frame = 1
Query:  184 GKLFDAFVATLILLNVAAVIAESEPSLGGRAGSSDGRFQAFFDGFEAFSVLVFTAEISMRLFIAPISSRYSFSRWTYLSSFFGFIDVASIAPWYIEAVLRSSGVYFD--------ASAFRVLRLFRILQLEHFVSAFSLLDDVWTASRDTLAATGLLALVVWVGSACLFYLFEKDNA-------------------------------------CTGSAFSSIPDAMFYTAVFLGGEWAQVDFTWPGKVLCCVLCVFGIVLFGIP 843
            G +F   +  +I+LNV AVIAES P +    G+  G F   FD FE  SV+ F  E  +RLF AP +    +S + Y ++FFG +D  S  P++IE  L    +YF+        A  FRV R+FR+LQLE F+ AFS LD+V+ AS D L ATGLLALV+WVG   LFY+FE++N                                      C   AF++IP++++YTAVFLGGEW  VDFTWPG+ +C  LCV GI L+ IP
Sbjct:  428 GYVFSISMFNIIVLNVLAVIAESIPEVDRAVGNQPGNF---FDVFELISVIFFATEYMLRLFCAPKNKAALYSSFIYATTFFGIVDFLSTVPYFIEHAL----IYFNVIQAGSDAAMMFRVFRIFRLLQLEGFIVAFSKLDNVFRASMDVLKATGLLALVIWVGCGSLFYIFEQNNPNFRSCDDSIPTHSTDSSTPGCFDFHTTEECNDVYPGMCKQVAFTNIPNSLYYTAVFLGGEWGLVDFTWPGRFVCLFLCVAGIGLYAIP 685          
BLAST of mRNA_S-firma_F_contig10201.320.1 vs. uniprot
Match: A0A7S0FML1_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FML1_9STRA)

HSP 1 Score: 191 bits (484), Expect = 5.230e-52
Identity = 104/259 (40.15%), Postives = 143/259 (55.21%), Query Frame = 1
Query:  187 KLFDAFVATLILLNVAAVIAESEPSLGGRAGSSDGRFQAFFDGFEAFSVLVFTAEISMRLFIAPISSRYSFSRWTYLSSFFGFIDVASIAPWYIEAVLRSSGVYFD---ASAFRVLRLFRILQLEHFVSAFSLLDDVWTASRDTLAATGLLALVVWVGSACLFYLFEKDNA------------------------------------CTGSAFSSIPDAMFYTAVFLGGEWAQVDFTWPGKVLCCVLCVFGIVLFGIPV 846
            + F  F+ +LI+ NV AV+ E+ P +    G+  G F   FD FEA S+  FT E  +R+F A  +    +S W Y ++FFG +D  S APWY+E +L  SG+      A+ FRV      LQLE F+  F  +D+V+ ASRD L ATGL+A+++WVG   LF++FE+ N                                     C  S+FSS+PD++FY AVFLGGEW  VDFTW G+++C  LCV GI L+ IPV
Sbjct:  476 RFFRVFMMSLIVSNVIAVLLETVPEIDKYVGNQPGNF---FDSFEAVSIFFFTLEYGLRVFSARKNLEALYSPWVYCTTFFGIVDFLSTAPWYVEQILLLSGIAESNDTATIFRVXXXXXXLQLEDFLVGFRKIDNVFRASRDVLKATGLMAVIIWVGCGALFFIFEQSNPNFRQCDVSIPLRTKHDTGCYDFESTAACEAYYGDGMCVQSSFSSMPDSLFYVAVFLGGEWGLVDFTWGGRMVCMFLCVIGIALYAIPV 731          
BLAST of mRNA_S-firma_F_contig10201.320.1 vs. uniprot
Match: A0A7R9WS76_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WS76_9STRA)

HSP 1 Score: 184 bits (467), Expect = 8.080e-52
Identity = 106/271 (39.11%), Postives = 149/271 (54.98%), Query Frame = 1
Query:  163 STGVTE---AGKLFDAFVATLILLNVAAVIAESEPSLGGRAGSSDGRFQAFFDGFEAFSVLVFTAEISMRLFIAPISSRYSFSRWTYLSSFFGFIDVASIAPWYIEAVLRSSGVYF----DASAFRVLRLFRILQLEHFVSAFSLLDDVWTASRDTLAATGLLALVVWVGSACLFYLFEKDNA-------------------------------------CTGSAFSSIPDAMFYTAVFLGGEWAQVDFTWPGKVLCCVLCVFGIVLFGIP 843
            + GVT      K+   F+  +I+LNV AV+AES P++    G++ G     FD FEAFSV+VF  E + RLF AP +    +S   Y ++FFG +D  S APW++E  L  +G       +A  FR       LQLE F+ AFS LD+V+ AS++ L ATGL+AL++WVG   LFY+FE++N                                      C    F+++P++++ TAVFLGGEW  VDFTWPG+++C  LCV GI L+ IP
Sbjct:  130 AAGVTRWTLTAKISRTFIFIVIILNVGAVLAESIPAVDQAVGNARGNV---FDAFEAFSVVVFAMEYAARLFSAPKNREALYSSTVYATTFFGIVDFLSTAPWFVEQGLIHTGSLSRNDDNARIFRXXXXXXXLQLEDFIVAFSKLDNVFRASKNILKATGLMALIIWVGCGALFYIFEENNPNWRSCDDSIPQFSVEEGTPGCYDFNSTAACNAYYPDMCDQKVFTNMPNSLYLTAVFLGGEWGVVDFTWPGRIVCLFLCVVGIGLYAIP 397          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10201.320.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FN88_ECTSI3.160e-16287.23Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CDK7_9STRA7.150e-7248.23Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A812X110_9DINO3.130e-6249.57Shal protein n=1 Tax=Symbiodinium necroappetens Ta... [more]
A0A7S1DR60_HEMAN1.750e-5848.88Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A7S0XQ15_HEMAN1.590e-5653.33Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A7S1VPC1_9STRA4.080e-5441.51Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S2U8P7_9STRA1.360e-5340.51Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S1GK10_CYCTE1.440e-5242.26Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S0FML1_9STRA5.230e-5240.15Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A7R9WS76_9STRA8.080e-5239.11Hypothetical protein n=1 Tax=Craspedostauros austr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10201contigS-firma_F_contig10201:729..5046 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Seed ortholog2880.D7FN88
PFAMsIon_trans,Ion_trans_2,Methyltransf_25,Ras,Voltage_CLC
Max annot lvl2759|Eukaryota
Evalue5.18e-163
EggNOG OGsCOG2126@1|root,KOG1419@2759|Eukaryota,KOG3713@2759|Eukaryota
Descriptionvoltage-gated potassium channel activity
COG categoryJ
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionIQ motif, EF-hand binding site
Ec32 orthologEc-15_003380.1
Exons5
Model size846
Cds size846
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10201.320.1prot_S-firma_F_contig10201.320.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig10201 729..5046 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815549.0043979-CDS-S-firma_F_contig10201:728..8931622815549.0043979-CDS-S-firma_F_contig10201:728..893Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10201 729..893 -
1696949408.2081285-CDS-S-firma_F_contig10201:728..8931696949408.2081285-CDS-S-firma_F_contig10201:728..893Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10201 729..893 -
1622815549.0479453-CDS-S-firma_F_contig10201:1697..19171622815549.0479453-CDS-S-firma_F_contig10201:1697..1917Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10201 1698..1917 -
1696949408.2291517-CDS-S-firma_F_contig10201:1697..19171696949408.2291517-CDS-S-firma_F_contig10201:1697..1917Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10201 1698..1917 -
1622815549.1168413-CDS-S-firma_F_contig10201:3004..31441622815549.1168413-CDS-S-firma_F_contig10201:3004..3144Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10201 3005..3144 -
1696949408.240093-CDS-S-firma_F_contig10201:3004..31441696949408.240093-CDS-S-firma_F_contig10201:3004..3144Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10201 3005..3144 -
1622815549.1305287-CDS-S-firma_F_contig10201:3809..39921622815549.1305287-CDS-S-firma_F_contig10201:3809..3992Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10201 3810..3992 -
1696949408.2487645-CDS-S-firma_F_contig10201:3809..39921696949408.2487645-CDS-S-firma_F_contig10201:3809..3992Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10201 3810..3992 -
1622815549.1437263-CDS-S-firma_F_contig10201:4908..50461622815549.1437263-CDS-S-firma_F_contig10201:4908..5046Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10201 4909..5046 -
1696949408.2791147-CDS-S-firma_F_contig10201:4908..50461696949408.2791147-CDS-S-firma_F_contig10201:4908..5046Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10201 4909..5046 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig10201.320.1

>prot_S-firma_F_contig10201.320.1 ID=prot_S-firma_F_contig10201.320.1|Name=mRNA_S-firma_F_contig10201.320.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=282bp
KQVRGHLARRQFLLVVEGAQQQEDERKRQKLLMEMDYEAQLPIYQRSMRV
CYRFSTGVTEAGKLFDAFVATLILLNVAAVIAESEPSLGGRAGSSDGRFQ
AFFDGFEAFSVLVFTAEISMRLFIAPISSRYSFSRWTYLSSFFGFIDVAS
IAPWYIEAVLRSSGVYFDASAFRVLRLFRILQLEHFVSAFSLLDDVWTAS
RDTLAATGLLALVVWVGSACLFYLFEKDNACTGSAFSSIPDAMFYTAVFL
GGEWAQVDFTWPGKVLCCVLCVFGIVLFGIPV
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mRNA from alignment at S-firma_F_contig10201:729..5046-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig10201.320.1 ID=mRNA_S-firma_F_contig10201.320.1|Name=mRNA_S-firma_F_contig10201.320.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=4318bp|location=Sequence derived from alignment at S-firma_F_contig10201:729..5046- (Sphaerotrichia firma ET2_F female)
AAACAGGTACGGGGCCACCTGGCGCGGCGGCAGTTCCTGCTGGTCGTGGA AGGGGCGCAGCAGCAAGAGGACGAGAGAAAACGACAAAAGCTGCTGATGG AGATGGACTACGAGGCCCAGCTGCCGATCTACCAAAGGGTGAGGATTAGA GGACGTGCTTCGGCGAGCCTCGGACGTGTGTGTACGCCGTCTTGCCTTTT GTTCGCCTGCATTAAAAAAAAACTCGAGTATACATTTCTTTTTCGTGCTG CTGCCTTCGTGCTGGGGCCGATGGAGCCGCCTCTTTTTAATATATTTTCT ACATTCGTCAGCCGTATGCTGTACGTCCGTCCTGTGAATGAGTCGTTCCA GGGGGACTGTTGTGTACACACTAGCCCTCCCCGCCCCAGTCAACAGCACA AAATCCGCAATCCGTTAGGTTTGTTGGTTGTTGTTGTTCTTTTTCCTCGG AATGAGCGCGGTTTTTTTTTGGCTTCTTGGTGCTTCGCTTTCTTCGCTGC CGATGATGTGGGAATGAGAATTTCCAAATCTGCAAGCGCACCCTCTTGCT GACGGAACCCTGTCCTCGGCTTCCGAAGCCCTTGCATTGGCCTTGCTCAC GGTGGGCGGCCACGTACGCGCGGGCACGCAACCTGAACGCTATAGACCTC TACTGTTCCCCCCCTCCCAATAGTGTTTCTGTTGACTGCCCCGCTGGCCC CTATCCTCCGCTACGACTAATTTAGCTAGACGACCCACCCGGGGTCACTT TACCACGCGAATAAACCCTTGAGCCGGCAAAGCCTTGCGATATCCCACCC TCCTCCTCCTCCTCCTCCTTTCAAAACAAACCCCCCTAAGTCTTCCCCGG TCATTTCCGCCAAATCCTCCGTCCGCGGACCGTTTACGTTTTGGATTACC TCTCCTGGCACCCGCGTCGACAACAACAAAATTCACCGCCGACCACAACA ACAACAACAACAACAACAACAACAACAAAACAACAAAAACAACAAAAACA AACAACAACACCACCCACCACCGCCTCCGCGCCACGACGAAAACAAACGA GCAGTCGATGAGGGTCTGCTACAGGTTCTCGACCGGCGTGACGGAGGCCG GCAAGCTGTTCGACGCCTTCGTGGCGACGCTGATCCTGCTCAACGTGGCG GCGGTGATCGCGGAGTCGGAGCCCAGCCTCGGCGGAAGAGCCGGGTCGTC AGACGGGCGGTTCCAGGCCTTCTTCGACGGCTTCGAGGTCAGTAAGATCG GGGGGGGGGGTCGGGGGTTGGGGTGGGGGGGCGCGGGGGGGGGTGAGGTA TTTGCGAGGAAGGCGGGTGTTTTTCTTGTGCCGACCAAGCCCACGGCTCT GCTGTTTCTGTATGTCGCTGTTTCTGTATGTCGCTGTTTCTGTATGTCGC TCTTTCTGTATGTCGCTTCTTCTGTAGGTCGCTATTTCTCTATGTCGCTG TTTCGTTTGTTTTTCCTGCGTTGTGGTTTTGGGAAGGTGATGGTGATGGT GATGGTGATGGTGAACGAGAGGGAATGGGTGGTCCAGTTGAAGGTAGAGA TTCCCGGCCTTTTTTTTTTGACGACTTCGAGCCGAGAAAGGTAAGGCGCG GAGGGAGGTTAACGTCTGTTCTGGCGTGGTGGGTTGTGTGAGTGCCCCTT GTCTCGTCGTGATATTTCGTCTCTTTTGGGATTTCGTCTTGGTGAAGGAA GGAAGTAATGAACGAATTAATTTGAATGACTATTCAGCCTAGGTGCCGGG TTCGCTTCGACGGCGTCATTGATGTTTTTTGCGTTTTTGTGTATGCTAAT TTTTTTTCTTGCTTCTCCTTCCGTCTCCTTCCGTCCGTTTTGTTCTTCGC TTTTTCTTGTTCGTTTCCCCGCTTATCGCGATTTCCTTCCGGACGAGGCA AGGCGTTCTCCGTGCTGGTGTTCACGGCGGAGATTTCGATGCGGCTGTTC ATCGCCCCCATCTCGTCCAGGTATAGCTTCAGCAGGTGGACCTACCTCAG CTCCTTCTTCGGCTTCATCGACGTGGCCTCCATCGCCCCATGGTGGGTTG CTGGTCTGAGTGCAAGATTGTGATACGTTTTTTTTTTTTTCTGGATCGAC AGCGCCTCCATCGGCCCATGGTGGGTTGCTGGTCTTGGTAAATACAGATA GTGTTTTTTTTTTTTTTTCTGGATCGACGTCGCTTCCATCGATCGCCCCA TGGTAGGTCTGCCGTTCTTGCTGCGTGCGGTACGGTGCGGTGACGATCAA GATGATATGTTTTGTTTTCCTGATTTTCTTCCTCGACGACGCTTCCGTCG CCCGTTGGTGGCGGGTGTTCTTGGTTCGTGTGTGTTGTTGACATGCCAAG ATGTCGTGATTTGTTGGGTTGTTTGTTGTTTGTCAGAGATTCAGAAACCG AGACGAGCTTTGGGGAGAGGGGTGCCTTCGGCGGATCAACATCAACCAAC CGCTATCCACATATATTTATCGTTACGTGTTTTCGACTCATTCCGTTTCG CCGCCGGCGTCTTGTTTCTGTGGCGGGATAACTCCGCCTTCCGTTCACTA TATGTCGCTCCGCATCGCTCCACGTTGCCCCGCATCTCTCCTCACCCGCC CGCATCTGCAGGATAACTCCGCCTTTCGTTCGATATATGTCGCTCCACAT CGCTCCACGTTGCCCCGCATCTCTCCTCACCCGCCCGCATCTGCGGGATA ACTCCGCCTTCCGTTCACTCTATGTCGCTCCACATCGCTCCGCATTGCCC CGCATCTCTCCTCACCCGCCCGCACCTCCTCACGTCGCTTAGCATCCCTC CACACCGCTCTACACCGCTCACCGCTCCACCCCTCCACCCCAACCTTGGC CTCTCTCGCTTCACGTCGCCCTGACATCGATCGCTCCACGTCGCCTCGCT CCAACACTTGGCTCCGCGTCGCTCACTCCACAACGCTCCGCACCACGCGG CTTTGATTCTCGTCACGTCACGTCACGTCACGTCACGTCACGTCACGTCA CGTCACATCATCCCGCTCATGGTTTGCCCGCTTCTCCTCTCCTCTCTTTC CTGACATGTCTGCCCTACATATTCTGTTCTGCCTGTTCTGCCCGCCTGCG GCTGTCGTGTGTGCCCGCCGCCCGATCAGGTACATCGAGGCGGTTCTTCG GTCCTCCGGGGTCTACTTCGACGCCTCGGCGTTCCGCGTGCTGAGGCTCT TCCGCATCCTGCAGCTGGAGCACTTCGTGTCGGCCTTCTCGCTGCTGGAC GACGTGTGGACGGCGTCGAGGGACACCCTCGCCGCCACGGGGCTGCTGGC GCTGGTGGTGTGGGTGGGCAGCGCGTGCCTGTTCTACCTCTTCGAGAAGG TGTGTGTGTCTTGTGTGTGTGTACTATAGGATTTTCTTTTTGTGGTCTTG TGTGTGTCTTGTGTGTGTGTACTATAGGATTTTCTTTTTGTGTGTGTTTT TGTGTGGCTGTTTTTGTGAGAGTGGCATGCGATTGGTTTGGTTTAGTTGT TTAATAAATTTTCTACATCCGTCAGCCGTATACGTCCGTCCTGTGAATAA GTCGTTCCAGGGGTAATGACTGTTGTTTGTGCCGTTTTCTTTCGCTGTAC CGTGTGTTGGTCGTGTGGGAAGGCGGCAACTGCGTCTCCGGTCCTCTCCG AGATGGTGGTGTCACTGTTGCTTTTGCTGTTGCTGGATCTGTTGCTGTTG CTGTTGCTGTTGCTGCTGCTGCTGCTGTTGCTGCTGCTGTTTTCTCGCGT TAAATTTTGGCTCTCTTTACTTGAAGGCGTCCGTTCGGGGGGCCTTGATC ATAGAAGCAGCGCACACGCACCACTGTGTGCGCTGTGTTCGAGTGGCAAG CATTGTTCTGGTTTTGGTTTTGGTTTGGTGCGTTTCGTTTCTGTTGTCGT TATCACGTCTCTCCGCCCTCTTGAATCCGCGAAGGCAGCGCAGCGCGCCC GTGTATGTTGGCACGTACAATAGCATCTCTCTTCTGCCTCCTATCCGATG TAACCCATTCGTTTCTCTGGCCTTGTTTTTTTTCGTGTGTGTGTGTGTGT TTTTTCGTGTTTTCTGAATAAATTTTCTACATTCGTCAGCCGTATACGTC CGTCCTGTGAATAAGTTTTCTTGTCTCCTTTGGGCTGTCTGCGCATTCGG CAGGACAACGCGTGCACCGGCAGCGCCTTCAGCAGCATCCCCGACGCCAT GTTCTACACGGCCGTCTTCCTCGGCGGCGAATGGGCCCAGGTCGACTTCA CCTGGCCCGGGAAGGTCCTCTGCTGCGTGCTGTGCGTCTTCGGCATCGTT CTCTTCGGCATCCCGGTA
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Coding sequence (CDS) from alignment at S-firma_F_contig10201:729..5046-

>mRNA_S-firma_F_contig10201.320.1 ID=mRNA_S-firma_F_contig10201.320.1|Name=mRNA_S-firma_F_contig10201.320.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1692bp|location=Sequence derived from alignment at S-firma_F_contig10201:729..5046- (Sphaerotrichia firma ET2_F female)
AAACAGGTACGGGGCCACCTGGCGCGGCGGCAGTTCCTGCTGGTCGTGGA
AGGGGCGCAGCAGCAAGAGGACGAGAGAAAACGACAAAAGCTGCTGATGG
AGATGGACTACGAGGCCCAGCTGCCGATCTACCAAAGGAAACAGGTACGG
GGCCACCTGGCGCGGCGGCAGTTCCTGCTGGTCGTGGAAGGGGCGCAGCA
GCAAGAGGACGAGAGAAAACGACAAAAGCTGCTGATGGAGATGGACTACG
AGGCCCAGCTGCCGATCTACCAAAGGTCGATGAGGGTCTGCTACAGGTTC
TCGACCGGCGTGACGGAGGCCGGCAAGCTGTTCGACGCCTTCGTGGCGAC
GCTGATCCTGCTCAACGTGGCGGCGGTGATCGCGGAGTCGGAGCCCAGCC
TCGGCGGAAGAGCCGGGTCGTCAGACGGGCGGTTCCAGGCCTTCTTCGAC
GGCTTCGAGTCGATGAGGGTCTGCTACAGGTTCTCGACCGGCGTGACGGA
GGCCGGCAAGCTGTTCGACGCCTTCGTGGCGACGCTGATCCTGCTCAACG
TGGCGGCGGTGATCGCGGAGTCGGAGCCCAGCCTCGGCGGAAGAGCCGGG
TCGTCAGACGGGCGGTTCCAGGCCTTCTTCGACGGCTTCGAGGCGTTCTC
CGTGCTGGTGTTCACGGCGGAGATTTCGATGCGGCTGTTCATCGCCCCCA
TCTCGTCCAGGTATAGCTTCAGCAGGTGGACCTACCTCAGCTCCTTCTTC
GGCTTCATCGACGTGGCCTCCATCGCCCCATGGCGTTCTCCGTGCTGGTG
TTCACGGCGGAGATTTCGATGCGGCTGTTCATCGCCCCCATCTCGTCCAG
GTATAGCTTCAGCAGGTGGACCTACCTCAGCTCCTTCTTCGGCTTCATCG
ACGTGGCCTCCATCGCCCCATGGTACATCGAGGCGGTTCTTCGGTCCTCC
GGGGTCTACTTCGACGCCTCGGCGTTCCGCGTGCTGAGGCTCTTCCGCAT
CCTGCAGCTGGAGCACTTCGTGTCGGCCTTCTCGCTGCTGGACGACGTGT
GGACGGCGTCGAGGGACACCCTCGCCGCCACGGGGCTGCTGGCGCTGGTG
GTGTGGGTGGGCAGCGCGTGCCTGTTCTACCTCTTCGAGAAGGTACATCG
AGGCGGTTCTTCGGTCCTCCGGGGTCTACTTCGACGCCTCGGCGTTCCGC
GTGCTGAGGCTCTTCCGCATCCTGCAGCTGGAGCACTTCGTGTCGGCCTT
CTCGCTGCTGGACGACGTGTGGACGGCGTCGAGGGACACCCTCGCCGCCA
CGGGGCTGCTGGCGCTGGTGGTGTGGGTGGGCAGCGCGTGCCTGTTCTAC
CTCTTCGAGAAGGACAACGCGTGCACCGGCAGCGCCTTCAGCAGCATCCC
CGACGCCATGTTCTACACGGCCGTCTTCCTCGGCGGCGAATGGGCCCAGG
TCGACTTCACCTGGCCCGGGAAGGTCCTCTGCTGCGTGCTGTGCGTCTTC
GGCATCGTTCTCTTCGGCATCCCGGTAGACAACGCGTGCACCGGCAGCGC
CTTCAGCAGCATCCCCGACGCCATGTTCTACACGGCCGTCTTCCTCGGCG
GCGAATGGGCCCAGGTCGACTTCACCTGGCCCGGGAAGGTCCTCTGCTGC
GTGCTGTGCGTCTTCGGCATCGTTCTCTTCGGCATCCCGGTA
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