mRNA_S-firma_F_contig102.313.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig102.313.1 vs. uniprot
Match: A0A6H5JQQ2_9PHAE (FCP1 homology domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQQ2_9PHAE) HSP 1 Score: 205 bits (521), Expect = 8.010e-57 Identity = 112/177 (63.28%), Postives = 129/177 (72.88%), Query Frame = 1
Query: 100 QRIFVRKRPHLKEFLEAAAEMFEVVLFTAAPAGFAQAVVDQIDPGRRLVDHVLSRESCTRL-------------KIDGSNSR------GKEG-------RSDERGPTSVVKDLAVVGRPLSKVIMVDNSLDAIRYQLENGVHISSFYGDHEDTGLLSTLEALKTLAPMADVRDGIIR 552
+R++VRKRPHL+EFLEA +EMFEVVLFTAAP FA AV++QIDP VDHVLS ++CTRL + GS+S G++G R GPTS+VKDL ++GRPLSKVIMVDNSLDAIRY LENGVHISSFYGD EDT LLSTL+ALKTLAP ADVRD IIR
Sbjct: 245 RRVYVRKRPHLREFLEAVSEMFEVVLFTAAPQAFATAVLEQIDPEGSFVDHVLSSDNCTRLGSSTIRGASGGSGRSRGSSSSSCRTWGGRDGGVSSDLSRKRREGPTSMVKDLGIIGRPLSKVIMVDNSLDAIRYHLENGVHISSFYGDREDTDLLSTLDALKTLAPAADVRDAIIR 421
BLAST of mRNA_S-firma_F_contig102.313.1 vs. uniprot
Match: D7G1R3_ECTSI (Putative nuclear LIM interactor-interacting protein, C terminal part n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1R3_ECTSI) HSP 1 Score: 121 bits (303), Expect = 1.240e-29 Identity = 60/69 (86.96%), Postives = 64/69 (92.75%), Query Frame = 1
Query: 346 VVKDLAVVGRPLSKVIMVDNSLDAIRYQLENGVHISSFYGDHEDTGLLSTLEALKTLAPMADVRDGIIR 552
+VKDL ++GRPLSKVIMVDNSLDAIRY LENGVHISSFYGD EDT LLSTL+ALKTLAP ADVRDGIIR
Sbjct: 1 MVKDLGIIGRPLSKVIMVDNSLDAIRYHLENGVHISSFYGDREDTELLSTLDALKTLAPAADVRDGIIR 69
BLAST of mRNA_S-firma_F_contig102.313.1 vs. uniprot
Match: W7TZE3_9STRA (Nuclear lim interactor-interacting protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TZE3_9STRA) HSP 1 Score: 115 bits (289), Expect = 2.750e-24 Identity = 64/165 (38.79%), Postives = 102/165 (61.82%), Query Frame = 1
Query: 82 DVDGNYQRIFVRKRPHLKEFLEAAAEMFEVVLFTAAPAGFAQAVVDQIDPGRRLVDHVLSRESCTRLKIDGSNSRGKEGRSDERGPTSVVKDLAVVGRPLSKVIMVDNSLDAIRYQLENGVHISSFYGDHEDTGLLSTLEALKTLAPMADVRDGIIRLSVETQAR 576
D +G ++ VRKRPHL+EFL ++MFEVV+FTA+ +A A++D IDPG+RL+ H L R++C L ++G+ +KDL V+GR +++ +++DNS A YQ++NG+ I S++ D +D LL L L+ L + DVR +IR + ++ R
Sbjct: 295 DFNGVSYQVHVRKRPHLEEFLGRVSKMFEVVVFTASQQVYADALLDLIDPGQRLIKHRLFRDAC--LPVEGN----------------YIKDLHVLGRDMARTVLIDNSPYAYGYQIDNGIPIESWFEDRDDMELLKLLPFLEELQRVDDVRP-LIRTAFQSHLR 440
BLAST of mRNA_S-firma_F_contig102.313.1 vs. uniprot
Match: A0A1Y1ISU8_KLENI (SCP1-like small phosphatase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1ISU8_KLENI) HSP 1 Score: 116 bits (290), Expect = 4.710e-24 Identity = 59/166 (35.54%), Postives = 105/166 (63.25%), Query Frame = 1
Query: 79 EDVDGNY--------QRIFVRKRPHLKEFLEAAAEMFEVVLFTAAPAGFAQAVVDQIDPGRRLVDHVLSRESCTRLKIDGSNSRGKEGRSDERGPTSVVKDLAVVGRPLSKVIMVDNSLDAIRYQLENGVHISSFYGDHEDTGLLSTLEALKTLAPMADVRDGIIR 552
+D D N+ ++VR+RPHL++F+E A++FE+++FTA+ + +A+ +++ +DP RRL+ H + RESC + ++G+ +KDL+V+GR L+K ++VDNS A +Q+ENG+ I S++ D ED+ LL+ L L++L + DVR +++
Sbjct: 368 DDADFNFPVHFNGCKHTVYVRRRPHLEQFMERVAQLFEIIVFTASQSVYAETLLNILDPKRRLIRHRIFRESC--VYVEGN----------------YLKDLSVLGRDLAKTVIVDNSPQAFGFQVENGIPIESWFDDQEDSALLTLLPFLESLVGVEDVRPLVLK 515
BLAST of mRNA_S-firma_F_contig102.313.1 vs. uniprot
Match: A0A564YPP4_HYMDI (FCP1 homology domain-containing protein n=1 Tax=Hymenolepis diminuta TaxID=6216 RepID=A0A564YPP4_HYMDI) HSP 1 Score: 109 bits (273), Expect = 6.560e-24 Identity = 58/150 (38.67%), Postives = 92/150 (61.33%), Query Frame = 1
Query: 103 RIFVRKRPHLKEFLEAAAEMFEVVLFTAAPAGFAQAVVDQIDPGRRLVDHVLSRESCTRLKIDGSNSRGKEGRSDERGPTSVVKDLAVVGRPLSKVIMVDNSLDAIRYQLENGVHISSFYGDHEDTGLLSTLEALKTLAPMADVRDGIIR 552
+++VR RPHL+ FLE ++++EVVLFTA+ +A +V+ +DP ++ + H L RESC + ++G+ VKDL V+GR L+K +++DNS A YQL NG+ I S++ D +DT L+ + L+ LA + DVR + R
Sbjct: 8 KVYVRLRPHLQPFLEKVSQLYEVVLFTASTKVYADQLVNLLDPKKKYIKHRLFRESC--VFVNGN----------------YVKDLRVLGRDLTKTVIIDNSPQAFGYQLSNGIPIESWFTDQQDTELIKLIPFLERLAKLTDVRPFVDR 139
BLAST of mRNA_S-firma_F_contig102.313.1 vs. uniprot
Match: A0A4P9Z476_9FUNG (HAD-like domain-containing protein n=1 Tax=Syncephalis pseudoplumigaleata TaxID=1712513 RepID=A0A4P9Z476_9FUNG) HSP 1 Score: 110 bits (274), Expect = 8.520e-24 Identity = 61/152 (40.13%), Postives = 91/152 (59.87%), Query Frame = 1
Query: 82 DVDGNYQRIFVRKRPHLKEFLEAAAEMFEVVLFTAAPAGFAQAVVDQIDPGRRLVDHVLSRESCTRLKIDGSNSRGKEGRSDERGPTSVVKDLAVVGRPLSKVIMVDNSLDAIRYQLENGVHISSFYGDHEDTGLLSTLEALKTLAPMADVR 537
+ +G + R RP+ +EFLE A MFEVV+FTA+ +A ++D IDP R+L+ + L R+SC + + G+ +KDL+++GR LSKV++VDN+ A YQL NG+ I S+Y D D LL+ L+ L+TL + DVR
Sbjct: 83 EFNGMLYEVHGRCRPYYREFLERVARMFEVVIFTASQKSYANRLLDIIDPNRKLIKYRLFRDSC--VHVCGN----------------YLKDLSILGRDLSKVVIVDNAPQAFAYQLSNGIPIESWYEDPADKELLNVLQFLETLVGLDDVR 216
BLAST of mRNA_S-firma_F_contig102.313.1 vs. uniprot
Match: A4SBH8_OSTLU (FCP1 homology domain-containing protein (Fragment) n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4SBH8_OSTLU) HSP 1 Score: 108 bits (270), Expect = 9.240e-24 Identity = 60/156 (38.46%), Postives = 92/156 (58.97%), Query Frame = 1
Query: 88 DGNYQRIFVRKRPHLKEFLEAAAEMFEVVLFTAAPAGFAQAVVDQIDPGRRLVDHVLSRESCTRLKIDGSNSRGKEGRSDERGPTSVVKDLAVVGRPLSKVIMVDNSLDAIRYQLENGVHISSFYGDHEDTGLLSTLEALKTLAPMADVRDGIIRL 555
+G+ R+ VRKRPHL F+E ++ +E+V+FTA+ +A ++D +DP ++ + H + R+SC ++IDG+ +KDL V+GR LS+ I++DNS A Q+ENG+ I S+Y D D LLS L L LA DVR + R+
Sbjct: 46 NGDMHRVNVRKRPHLSTFMELVSKQYEIVVFTASQQIYADKLLDILDPSQKWIKHRIFRDSC--VQIDGN----------------FMKDLRVLGRDLSRTIIIDNSPQAFGLQVENGIPIESWYDDDADNHLLSLLPILNELAADTDVRVTLDRM 183
BLAST of mRNA_S-firma_F_contig102.313.1 vs. uniprot
Match: D8T0Q9_SELML (FCP1 homology domain-containing protein (Fragment) n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8T0Q9_SELML) HSP 1 Score: 110 bits (274), Expect = 1.000e-23 Identity = 57/150 (38.00%), Postives = 96/150 (64.00%), Query Frame = 1
Query: 94 NYQR--IFVRKRPHLKEFLEAAAEMFEVVLFTAAPAGFAQAVVDQIDPGRRLVDHVLSRESCTRLKIDGSNSRGKEGRSDERGPTSVVKDLAVVGRPLSKVIMVDNSLDAIRYQLENGVHISSFYGDHEDTGLLSTLEALKTLAPMADVR 537
N+QR ++VR+RPHL+ F+E A++FE+++FTA+ + +A+ +++ +DP R++ H + R+SC + +DG+ +KDL+V+GR LSK ++VDNS A +Q++NG+ I S++ D D L S L L++LA DVR
Sbjct: 75 NFQRQTVYVRRRPHLQMFMERVAQLFEIIVFTASQSTYAEKLLNILDPKRKVFRHRIFRDSC--VLVDGN----------------YLKDLSVLGRDLSKTVIVDNSPQAFGFQVDNGIPIESWFDDEADCALASLLPFLESLASAEDVR 206
BLAST of mRNA_S-firma_F_contig102.313.1 vs. uniprot
Match: A0A1Y1VFC4_9FUNG (FCP1 homology domain-containing protein n=1 Tax=Piromyces finnis TaxID=1754191 RepID=A0A1Y1VFC4_9FUNG) HSP 1 Score: 111 bits (277), Expect = 1.130e-23 Identity = 60/152 (39.47%), Postives = 92/152 (60.53%), Query Frame = 1
Query: 82 DVDGNYQRIFVRKRPHLKEFLEAAAEMFEVVLFTAAPAGFAQAVVDQIDPGRRLVDHVLSRESCTRLKIDGSNSRGKEGRSDERGPTSVVKDLAVVGRPLSKVIMVDNSLDAIRYQLENGVHISSFYGDHEDTGLLSTLEALKTLAPMADVR 537
+++G ++ R RP+ EFLE AEMFEV++FTA+ +A ++D +DP +L+ H L R+ C + + G+ +KDL+V+GR LSK I++DNS+ A YQLENG+ I+S+Y D D LL LE L+++ + DVR
Sbjct: 99 ELNGQQFQVSGRYRPYCSEFLEKVAEMFEVIIFTASQKVYADTLLDFMDPSHKLISHRLFRDEC--VTVYGN----------------YLKDLSVLGRDLSKTIIIDNSIYAFGYQLENGIPITSWYSDKNDKELLCVLEFLESIVGVYDVR 232
BLAST of mRNA_S-firma_F_contig102.313.1 vs. uniprot
Match: C1MWL7_MICPC (Predicted protein (Fragment) n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MWL7_MICPC) HSP 1 Score: 108 bits (269), Expect = 1.600e-23 Identity = 63/149 (42.28%), Postives = 93/149 (62.42%), Query Frame = 1
Query: 94 NYQRIF-VRKRPHLKEFLEAAAEMFEVVLFTAAPAGFAQAVVDQIDPGRRLVDHVLSRESCTRLKIDGSNSRGKEGRSDERGPTSVVKDLAVVGRPLSKVIMVDNSLDAIRYQLENGVHISSFYGDHEDTGLLSTLEALKTLAPMADVR 537
N Q I VRKRP+L+EF+E AA FEVV+FTA+ +A+ +++ IDP +RL+ H L RESC + ++G+ +KDL+V+GR LS+ I+VDNS A +Q++NGV I S++ D D LL + L L+ ++DVR
Sbjct: 53 NQQHIVNVRKRPYLREFMEFAAARFEVVVFTASQRVYAERLLNTIDPEKRLIKHRLYRESC--VLVEGN----------------YMKDLSVLGRDLSRTIIVDNSPQAFGFQVDNGVPIESWFDDVSDRQLLKLMPLLARLSEVSDVR 183 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig102.313.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig102.313.1 >prot_S-firma_F_contig102.313.1 ID=prot_S-firma_F_contig102.313.1|Name=mRNA_S-firma_F_contig102.313.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=156bp MFEVVLFTAAPAGFAQAVVDQIDPGRRLVDHVLSRESCTRLKIDGSNSRGback to top mRNA from alignment at S-firma_F_contig102:32302..34886- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig102.313.1 ID=mRNA_S-firma_F_contig102.313.1|Name=mRNA_S-firma_F_contig102.313.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=2585bp|location=Sequence derived from alignment at S-firma_F_contig102:32302..34886- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig102:32302..34886- >mRNA_S-firma_F_contig102.313.1 ID=mRNA_S-firma_F_contig102.313.1|Name=mRNA_S-firma_F_contig102.313.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=936bp|location=Sequence derived from alignment at S-firma_F_contig102:32302..34886- (Sphaerotrichia firma ET2_F female)back to top |