mRNA_S-firma_F_contig10199.309.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10199.309.1 vs. uniprot
Match: A0A7S4UWB1_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4UWB1_9DINO) HSP 1 Score: 253 bits (645), Expect = 3.660e-78 Identity = 134/265 (50.57%), Postives = 166/265 (62.64%), Query Frame = 1
Query: 1 RTINAYKPEMMAHPELFDTARGWQPEWFDPALLAALGDGSPAALRSLVTEVTPGVFMLPFFTAAFCGMLMDELRAYEATPLEKTRPNSMNNYGLILNDMGLEGMMSALLEGYARPFAAELFPEAGSAVDHHHSFLVQYAPGQDTHLDMHIDDSEVTLNVSLTSEFTGAGLAFCGNIHSTSHRKHSLTYAHRLGYAVIHLGRHRHGALHIEAGERVNLIMWMRSAELRRQPGYTHISRVVGEE----DPDAVCLSRTHDPDYDEWR 783
R I+ Y+ M AH LFD A+GW EWFDPALLAAL G ALR L E V+ LP F AFC ML++E+ ++ A+ L RPNSMNNYG+++N++GLE ++ L +P A LFP AGS +D HHSF+V+Y G+D LDMH DDS+VT NV L +F GAGL FCGN + HR S Y H G V+HLG RHGA I GER+NLI+W +++E RR GY G E PD VCLS THD DY +R
Sbjct: 163 RVISMYE-RMRAHACLFDAAQGWTREWFDPALLAALDSGVDGALRGLAREEVWEVYSLPLFATAFCDMLVEEVDSFSASKLPARRPNSMNNYGVVVNEIGLEPLLDRLQREVLQPLARALFPGAGSHLDRHHSFVVRYKVGEDLGLDMHTDDSDVTFNVCLGRDFQGAGLRFCGNQATAKHRHASAVYGHARGRCVVHLGHRRHGADDITEGERLNLIVWNKNSEYRRTEGYRRHLPGDGYEREAGPPDRVCLSFTHDRDYGVFR 426
BLAST of mRNA_S-firma_F_contig10199.309.1 vs. uniprot
Match: A0A6B2L3U1_9EUKA (Fe2OG dioxygenase domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L3U1_9EUKA) HSP 1 Score: 251 bits (642), Expect = 8.780e-78 Identity = 131/266 (49.25%), Postives = 169/266 (63.53%), Query Frame = 1
Query: 4 TINAYKPEMMAHPELFDTARGWQPEWFDPALLAALGDGSPAALRSLVTEVTPGVFMLPFFTAAFCGMLMDELRAYEATPLEKTRPNSMNNYGLILNDMGLEGMMSALLEGYARPFAAELFPE-AGSAVDHHHSFLVQYAPGQDTHLDMHIDDSEVTLNVSLTSEFTGAGLAFCG--NIHSTSHRKHSLTYAHRLGYAVIHLGRHRHGALHIEAGERVNLIMWMRSAELRRQPGYTHISRVVGEEDPDAVCLSRTHDPDYDEWREKF 792
TI Y+P HPELFDT RGW EWFD + A+ G+ + +L+ E GV+ + +C LM+E+R +E + L K RPNSMNNYGLILN++GLE M +E Y +P A LF E G ++DHHH+F+V+Y G+D LDMH DDSEVTLNV+L F GA L FCG N + RKH+LTY H+ G AV+HLG RHGA I +GER NLI+W RS++ R Q + + EE PD +CLS+THD DY W+ F
Sbjct: 188 TITHYRP---IHPELFDTNRGWHDEWFDKDFIEAIKTGTSIRIAALMKEDCKGVYSFNMLSQLYCQKLMEEIRNFENSDLPKQRPNSMNNYGLILNNIGLEPMFDIFIEVYMKPIATLLFSEFGGRSLDHHHTFVVEYKVGKDLSLDMHTDDSEVTLNVNLYDSFEGASLNFCGRRNAEHGAERKHALTYNHKKGRAVVHLGSLRHGAAPITSGERFNLIVWGRSSQYREQGRHREYYKHF-EEVPDPICLSKTHDQDYKYWKHVF 449
BLAST of mRNA_S-firma_F_contig10199.309.1 vs. uniprot
Match: A0A7S4P4C6_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4P4C6_9EUKA) HSP 1 Score: 248 bits (632), Expect = 2.840e-76 Identity = 134/270 (49.63%), Postives = 171/270 (63.33%), Query Frame = 1
Query: 1 RTINAYKPEMMA-HPELFDTAR-GWQPEWFDPALLAALGDGSPAALRSLVTEVTPGVFMLPFFTAAFCGMLMDELRAYEATPLEKTRPNSMNNYGLILNDMGLEGMMSALLEGYARPFAAELFPEAGSAVDHHHSFLVQYAPGQDTHLDMHIDDSEVTLNVSLTSEFTGAGLAFCGNIHSTSHRKHSLTYAHRLGYAVIHLGRHRHGALHIEAGERVNLIMWMRSAELRRQPGYTHISRVVGEE---DPDAVCLSRTHDPDYD-EWREKF 792
R + AYK +A HP LF + W WF P + A+ G+ AL S++TE GVF P F+ FC MLMDE+ Y A+ L K RPNSMNNYGLILN++G+ + Y + ++ LFP G+++D HHSF+VQY G+D LDMHIDDSEVTLNV L EF+GAGL FCGN ++HRK SL Y H +G A++HLG RHGA I GER+NLI+W R R + + R GE+ PD VCLSRTHD DYD ++ +KF
Sbjct: 178 RAVIAYKYRAIAKHPALFSPGKIEWDNTWFAPEFIKAIESGTDEALSSILTEEAEGVFSFPIFSQKFCDMLMDEVDNYAASGLPKKRPNSMNNYGLILNEIGMANFFTQFQRKYLQRLSSYLFPIQGASLDDHHSFIVQYKQGEDLGLDMHIDDSEVTLNVCLGREFSGAGLTFCGNFGHSAHRKKSLAYHHVVGRAILHLGSRRHGADDISTGERLNLIVWNRCHAFR---SCSLMDRWPGEDAEGGPDLVCLSRTHDQDYDLQFLKKF 444
BLAST of mRNA_S-firma_F_contig10199.309.1 vs. uniprot
Match: A9V9W4_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V9W4_MONBE) HSP 1 Score: 248 bits (632), Expect = 6.100e-75 Identity = 127/257 (49.42%), Postives = 161/257 (62.65%), Query Frame = 1
Query: 37 HPELFDTARGWQPEWFDPALLAALGDGSP-AALRSLVTEVTPGVFMLPFFTAAFCGMLMDELRAYEATPLEKTRPNSMNNYGLILNDMGLEGMMSALLEGYARPFAAELFPEA--GSAVDHHHSFLVQYAPGQDTHLDMHIDDSEVTLNVSLTSEFTGAGLAFCGNIHSTSHRKHSLTYAHRLGYAVIHLGRHRHGALHIEAGERVNLIMWMRSAELRRQPGYT--HISRVVGEEDPDAVCLSRTHDPDYDEWREKF 792
HP LFD RGW WF P+ A+ +P AA+RSL E+TPGV+ FT FC ++ +L AYE + L KTRPNSMN YG+IL DMG+ M+ LL P L P G A+DHHHSF+VQY G D HLDMH DD+E T NV+LT +F+G+GL FCG +TSHRK + Y H+ G+AV+H G HRHGA ++ G R NLI+W RS+ R+ Y + + + EE PD CLS THD DY W + F
Sbjct: 297 HPALFDAVRGWPETWFLPSFWTAMHAPNPEAAIRSLAREITPGVWSFGMFTPEFCDLMAADLAAYEKSGLPKTRPNSMNRYGMILADMGMASMLDRLLWEMLNPIQRALLPALAQGLALDHHHSFVVQYEEGLDVHLDMHTDDAEFTCNVNLTDDFSGSGLTFCGMHGATSHRKLAGVYQHQRGHAVVHAGLHRHGADPLQTGRRENLIIWCRSSAYRQTREYKARYANPFLSEEAPDQRCLSTTHDRDYSHWTDVF 553
BLAST of mRNA_S-firma_F_contig10199.309.1 vs. uniprot
Match: A0A061QWD7_9CHLO (Prolyl 4-hydroxylase alpha subunit (Fragment) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061QWD7_9CHLO) HSP 1 Score: 239 bits (610), Expect = 2.640e-74 Identity = 123/257 (47.86%), Postives = 157/257 (61.09%), Query Frame = 1
Query: 28 MMAHPELFDTARGWQPEWFDPALLA---ALGDGSPAALRSLVTEVTPGVFMLPFFTAAFCGMLMDELRAYEATPLEKTRPNSMNNYGLILNDMGLEGMMSALLEGYARPFAAELFPEAGSAVDHHHSFLVQYAPGQDTHLDMHIDDSEVTLNVSLTSEFTGAGLAFCGNIHSTSHRKHSLTYAHRLGYAVIHLGRHRHGALHIEAGERVNLIMWMRSAELRRQPGYTHISRVVGEED--PDAVCLSRTHDPDYDEWR 783
M HPELFDT +GW+ +WF L+ ++G G +A+ LV E + G++ P F FC MLM+E+ Y + L RPNSMNNYGL+LN++G+ M++ L + Y P A LFP GS D HHSF+V+Y G+D LDMH DDS+VT NV L EFTGAGL FCG + +HRK Y H +G V+HLG HRHGA + GER NLI+W + R HI R +ED PD CLS THD DY +R
Sbjct: 72 MRKHPELFDTEQGWRTDWFPDELIRFQNSIGSGIESAVEQLVKEESSGIYSFPLFRVEFCNMLMEEMENYCDSGLPIRRPNSMNNYGLVLNEIGMRDMITQLQQQYLLPIAKTLFPVEGSQFDFHHSFIVKYKQGEDLGLDMHTDDSDVTFNVCLGREFTGAGLTFCGRSRTAAHRKFQFKYPHVVGRCVVHLGSHRHGADDLATGERNNLIIWNHNKRYRATGA--HIGRSYEKEDGPPDPECLSFTHDRDYGHFR 326
BLAST of mRNA_S-firma_F_contig10199.309.1 vs. uniprot
Match: A0A7S3BJR9_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3BJR9_9VIRI) HSP 1 Score: 235 bits (599), Expect = 8.160e-73 Identity = 127/260 (48.85%), Postives = 164/260 (63.08%), Query Frame = 1
Query: 4 TINAYKPEMMAHPELFDTARGWQPEWFDPALL-AALGDGSPAALRSLVTEVTPGVFMLPFFTAAFCGMLMDELRAYEATPLEKTRPNSMNNYGLILND-MGLEGMMSALLEGYARPFAAELFPEAGSAVDHHHSFLVQYAPGQDTHLDMHIDDSEVTLNVSLTSEFTGAGLAFCGNIHSTSHRKHSLTYAHRLGYAVIHLGRHRHGALHIEAGERVNLIMWMRSAELRRQPGYTHISRVVGEEDPDAVCLSRTHDPDYDE 777
TI AY+P+ HPELF+ + EWFD A + A L DGS A+R+ V E G + P FT AFCG+L+DE Y+A+ L RPNSMN YGLILND +GLE + AL +P A LFP+ G +D HH+FLV Y G+D LD H DDS+VT N +L EFTGAGL+ CG + RK Y H +G ++HLGRHRHGA IE+GER+NLI+W ++ R+ Y I ++PDAVC+S THD DY++
Sbjct: 54 TIEAYRPQAR-HPELFEG--DLREEWFDLAFVQAVLRDGSAEAVRAFVKEECAGAYSFPMFTPAFCGLLIDEAEHYQASGLPVRRPNSMNAYGLILNDGIGLESFIDALHRRALQPVARALFPQEGCRLDGHHAFLVHYQQGKDLGLDTHTDDSDVTFNTALGKEFTGAGLSLCGMMGGAGMRKLRHVYRHVVGRCLVHLGRHRHGADDIESGERINLIVWNHNSLWRKSTPYRSIELPDETDEPDAVCVSYTHDRDYEQ 310
BLAST of mRNA_S-firma_F_contig10199.309.1 vs. uniprot
Match: A0A8J5X6X5_DIALT (Fe2OG dioxygenase domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X6X5_DIALT) HSP 1 Score: 238 bits (608), Expect = 1.050e-72 Identity = 135/271 (49.82%), Postives = 169/271 (62.36%), Query Frame = 1
Query: 4 TINAYKPEMMAHPELFDTARGWQPEWFDPALLAALGDGSPAALRSLVTEVTPGVFMLPFFTAAFCGMLMDELRAYEATPLEKTRPNSMNNYGLILNDMGLEGMMSALLEGYARPFAAELFPEA---GS-AVDHHHSFLVQYAPGQDTHLDMHIDDSEVTLNVSLTSEFTGAGLAFCGNIHSTSHRKHSLTYAHRLGYAVIHLGRHRHGALHIEAGERVNLIMWMRSAELR-RQPGYTHISRVVGEEDPDAVCLSRTHDPDYDEWREKFGGV 801
TI+AY P + H LF W +P +LAA AA+RS V E+ PGVF L FT A CG+L+DELR +E T L +RPNSMN +G+I++++G+E +M L P A LF E+ GS ++DHHH+F V Y P DT LDMH DDSEVTLNV L S F GAGL FCG T++RKH +TYAH+ G AV+HLGR RHGA I GER +LI+W RS+ R R P + + V PD CLS THD DY+ W+E GV
Sbjct: 171 TISAYAP-LRTHGALFAQPPALLAGWVEPRVLAACDARDDAAIRSCVHELAPGVFSLALFTPALCGLLLDELRGFERTGLPASRPNSMNRHGVIVDEIGMERLMDELRVRLVCPLAEALFTESDQGGSHSLDHHHAFSVTYTPSADTGLDMHHDDSEVTLNVCLGSRFEGAGLTFCGRFGETTYRKHIVTYAHQPGRAVLHLGRQRHGADTIVRGERSSLIVWARSSSYRARAPDEPPMHQRVA---PDLCCLSYTHDIDYETWQELPPGV 437
BLAST of mRNA_S-firma_F_contig10199.309.1 vs. uniprot
Match: A0A7S3BDV8_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3BDV8_9EUKA) HSP 1 Score: 238 bits (608), Expect = 2.280e-72 Identity = 128/266 (48.12%), Postives = 161/266 (60.53%), Query Frame = 1
Query: 4 TINAYKPEMMAHPELFDTARGWQPEWFDPALLAAL-GDGSPAALRSLVTEVTPGVFMLPFFTAAFCGMLMDELRAYEATPLEKTRPNSMNNYGLILNDMGLEGMMSALLEGYARPFAAELFPEAGSAVDHHHSFLVQYAPGQDTHLDMHIDDSEVTLNVSLTSEFTGAGLAFCGNIHS--TSHRKHSLTYAHRLGYAVIHLGRHRHGALHIEAGERVNLIMWMRSAELRRQPGYT--HISRVVGEEDPDAVCLSRTHDPDYDEWRE 786
T+ Y+ + + H ELFD A G Q +WFDP+ A G P A+R LV EV PG+F P F+ FC L+DE YEA+ L RPNSMNNYG++LN +G+E +M L + RP A ELFP G +DHHH+F+VQY G+D LDMH D +VTLNV L EFTGAGL FCG S RK + H G A++HLG RHGA I+ GER NLIMW +SA R + + + PD VCLS THD DY+ ++E
Sbjct: 206 TMEQYRVQCL-HAELFDAAAGPQRDWFDPSFWAVFEGGAQPHAIRGLVEEVAPGIFQFPLFSDTFCEKLLDETLHYEASGLPVARPNSMNNYGVVLNAIGMERVMDLLQRSFVRPLANELFPTDGEHLDHHHTFMVQYKEGEDLGLDMHTDACDVTLNVCLGREFTGAGLTFCGVRGSGGADERKFVHRHEHVKGRAIMHLGHQRHGADDIKTGERYNLIMWNKSASFRLSKAFMQKYSTPPSSRGTPDLVCLSYTHDDDYETYKE 470
BLAST of mRNA_S-firma_F_contig10199.309.1 vs. uniprot
Match: A0A7S2JIQ6_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2JIQ6_9EUKA) HSP 1 Score: 231 bits (590), Expect = 2.870e-72 Identity = 123/245 (50.20%), Postives = 151/245 (61.63%), Query Frame = 1
Query: 70 QPEWFDPALLAALGDGSP--AALRSLVTEVTPGVFMLPFFTAAFCGMLMDELRAYEATPLEKTRPNSMNNYGLILNDMGLEGMMSALLEGYARPFAAELFPEAGSAVDHHHSFLVQYAPGQDTHLDMHIDDSEVTLNVSLTSEFTGAGLAFCG-NIHSTSHRKHSLTYAHRLGYAVIHLGRHRHGALHIEAGERVNLIMWMRSAELRRQPG----YTHISRVVGEEDPDAVCLSRTHDPDYDEWR 783
Q W P+LLAA G P AA+ +L +V PGV+ FF+ FC ++ E+ YE + L +RPNSMNNYG+++N +G+E M AL Y RP AA LFP G +DHHH+F+VQY G+D LDMH D +VTLNV L EFTGAGL FCG + RK S Y HR G AV+HLGRHRHGA I GER NLIMW +S+ R Y H + PD VCLS THD DY+E+R
Sbjct: 14 QSTWLAPSLLAAFASGPPDAAAVHALTEQVAPGVYAFDFFSREFCDQILCEMENYECSGLPVSRPNSMNNYGVVINSIGMERTMDALQREYVRPLAAALFPIEGDMIDHHHTFMVQYKQGEDLGLDMHTDACDVTLNVCLGKEFTGAGLTFCGLRGDGGNERKFSFRYEHRKGRAVMHLGRHRHGADDISTGERYNLIMWNKSSSFRSSRDFMSKYAHGASETTAP-PDLVCLSYTHDEDYEEYR 257
BLAST of mRNA_S-firma_F_contig10199.309.1 vs. uniprot
Match: A0A0M0J773_9EUKA (Fe2OG dioxygenase domain-containing protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J773_9EUKA) HSP 1 Score: 229 bits (585), Expect = 9.310e-71 Identity = 128/272 (47.06%), Postives = 163/272 (59.93%), Query Frame = 1
Query: 1 RTINAYKPEMMAHPELFDTARGWQPEWFDPALLAALGDGSP--AALRSLVTEVTPGVFMLPFFTAAFCGMLMDELRAYEATPLEKTRPNSMNNYGLILNDMGLEGMMSALLEGYARPFAAELFPEAGSAVDHHHSFLVQYAPGQDTHLDMHIDDSEVTLNVSLTSEFTGAGLAFCGNIHSTSHRKHSLTYAHRLGYAVIHLGRHRHGALHIEAGERVNLIMWMRSAELRRQPGYTH-ISRVVGEE--DPDAVCLSRTHDPDYDEWREKFGGV 801
+T AY+ + H ELF QP WF P+ AA G P AA+R+LV EV+PGVF F + +FC L+ EL Y+++ L RPNSMN YG++LN +G+E + AL Y R AA LFP G VDHHH+F+VQY G+D LDMH D +VTLNV L EFTGAGL FCG R S + H G A++H G HRHGA I GER NLI+W +S+ R Y + ++R +E PD VCLS THD DY+++R GV
Sbjct: 53 QTCAAYQ-SLCLHTELFQRP---QPSWFAPSFAAAFAHGPPTAAAVRALVEEVSPGVFAFDFLSPSFCERLLCELEHYDSSGLPVVRPNSMNRYGVVLNSIGMEKTIDALQRHYVRALAAALFPVEGEHVDHHHAFMVQYKHGEDLGLDMHTDACDVTLNVCLGKEFTGAGLTFCGLRGGGRERTFSYRHQHVKGRAIMHAGHHRHGADDILGGERYNLILWNKSSTFRASKDYMNKVARPEADEADKPDLVCLSYTHDDDYEKYRPLPAGV 320 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10199.309.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10199.309.1 >prot_S-firma_F_contig10199.309.1 ID=prot_S-firma_F_contig10199.309.1|Name=mRNA_S-firma_F_contig10199.309.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=261bp MMAHPELFDTARGWQPEWFDPALLAALGDGSPAALRSLVTEVTPGVFMLPback to top mRNA from alignment at S-firma_F_contig10199:1873..2743+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10199.309.1 ID=mRNA_S-firma_F_contig10199.309.1|Name=mRNA_S-firma_F_contig10199.309.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=871bp|location=Sequence derived from alignment at S-firma_F_contig10199:1873..2743+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10199:1873..2743+ >mRNA_S-firma_F_contig10199.309.1 ID=mRNA_S-firma_F_contig10199.309.1|Name=mRNA_S-firma_F_contig10199.309.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1566bp|location=Sequence derived from alignment at S-firma_F_contig10199:1873..2743+ (Sphaerotrichia firma ET2_F female)back to top |