mRNA_S-firma_F_contig10196.305.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10196.305.1 vs. uniprot
Match: A0A0D1DYL9_USTMA (Uncharacterized protein n=1 Tax=Ustilago maydis (strain 521 / FGSC 9021) TaxID=237631 RepID=A0A0D1DYL9_USTMA) HSP 1 Score: 68.9 bits (167), Expect = 9.180e-11 Identity = 43/102 (42.16%), Postives = 61/102 (59.80%), Query Frame = 1
Query: 151 TLEGHTSAVPALTCGASGD-IVSCSYDKAVKVWRDHTCVLACVGHTLAVFCVAVSLVDGSIVSGSADNTAKV--CSSTGECVATLKGHTDWVRGLCVLENGE 447
TL GHT V AL G G +VS S+DK K+WR+ CV GH +V+ V V++ +++ SAD T ++ S++ + +A GHTD VRGL +LE GE
Sbjct: 120 TLIGHTENVCALDAGPHGQYLVSGSWDKTAKIWRNWECVATLKGHEQSVWAV-VAVDHDRVLTASADKTIRLWSISNSSKPLAIFGGHTDAVRGLTLLEGGE 220
BLAST of mRNA_S-firma_F_contig10196.305.1 vs. uniprot
Match: A0A2N8UEZ5_9BASI (Related to DOA1-involved in ubiquitin-dependent proteolysis n=2 Tax=Sporisorium reilianum TaxID=72558 RepID=A0A2N8UEZ5_9BASI) HSP 1 Score: 68.6 bits (166), Expect = 1.250e-10 Identity = 46/103 (44.66%), Postives = 60/103 (58.25%), Query Frame = 1
Query: 151 TLEGHTSAVPALTCGASGD-IVSCSYDKAVKVWRDHTCVLACVGHTLAVFCVAVSLVDGS-IVSGSADNTAKV--CSSTGECVATLKGHTDWVRGLCVLENGE 447
TL GHT V AL G G +VS S+DK K+WR+ CV GH +V+ AV VD +++ SAD T ++ SS + +A GHTD VRGL +LE GE
Sbjct: 121 TLIGHTENVCALDVGPHGQYLVSGSWDKTAKIWRNWECVATLKGHEQSVW--AVLAVDQDRVLTASADKTIRLWSISSPAKPLAVFGGHTDAVRGLTLLEGGE 221
BLAST of mRNA_S-firma_F_contig10196.305.1 vs. uniprot
Match: V5EJL2_KALBG (Uncharacterized protein n=1 Tax=Kalmanozyma brasiliensis (strain GHG001) TaxID=1365824 RepID=V5EJL2_KALBG) HSP 1 Score: 68.6 bits (166), Expect = 1.310e-10 Identity = 48/103 (46.60%), Postives = 60/103 (58.25%), Query Frame = 1
Query: 151 TLEGHTSAVPALTCGASGD-IVSCSYDKAVKVWRDHTCVLACVGHTLAVFCVAVSLVDGS-IVSGSADNTAKV--CSSTGECVATLKGHTDWVRGLCVLENGE 447
TL GHT V AL G G IVS S+DK KVWR+ CV GH +V+ AV VD +++ SAD T ++ SS + +A GHTD VRGL +LE GE
Sbjct: 704 TLIGHTENVCALDVGPHGQYIVSGSWDKTAKVWRNWECVATFKGHEQSVW--AVLAVDQDRVLTASADKTIRLWSISSPTKPLAVFGGHTDAVRGLTLLEGGE 804
BLAST of mRNA_S-firma_F_contig10196.305.1 vs. uniprot
Match: S3C523_OPHP1 (Ubiquitin homeostasis protein lub1 n=1 Tax=Ophiostoma piceae (strain UAMH 11346) TaxID=1262450 RepID=S3C523_OPHP1) HSP 1 Score: 67.8 bits (164), Expect = 2.290e-10 Identity = 40/112 (35.71%), Postives = 61/112 (54.46%), Query Frame = 1
Query: 94 ATGHHPVIRLWSGEGVLEATLEGHTSAVPALTCGASGDIVSCSYDKAVKVWRDHTCVLACVGHTLAVFCVAVSLVDGSIVSGSADNTAKVCSSTGECVA---TLKGHTDWVR 420
+ G+ +IRLW G L GH S + AL C +G++VS S D+ V++WR CV L+++ V+V G +G++DN A+V S + VA TLK +D V+
Sbjct: 231 SAGNDFMIRLWQFNGTEVGALHGHDSFIYALDCLPTGELVSSSEDRTVRIWRGTACVQTITHPALSIWSVSVCQKTGDFATGASDNVARVFSRNKDRVASADTLKQFSDSVQ 342
BLAST of mRNA_S-firma_F_contig10196.305.1 vs. uniprot
Match: A0A5C3FAF0_9BASI (Related to DOA1 - involved in ubiquitin-dependent proteolysis n=1 Tax=Pseudozyma flocculosa TaxID=84751 RepID=A0A5C3FAF0_9BASI) HSP 1 Score: 67.8 bits (164), Expect = 2.310e-10 Identity = 52/140 (37.14%), Postives = 75/140 (53.57%), Query Frame = 1
Query: 49 EDPVFSIVAVPGGGFATGHHPVIRLWSGEGVLEAT-----LEGHTSAVPALTCGASGD-IVSCSYDKAVKVWRDHTCVLACVGHTLAVFCVAVSLVDGSIVSGSADNTAKVCS--STGECVATLKGHTDWVRGLCVLENG 444
+DP SIVA+ G H ++ +G+GV + + GH V L G G IVS S+DK KVWR+ CV GH AV+ V V++ + I++ SAD T ++ S + +AT GH+D VRGL +L+ G
Sbjct: 75 QDPSGSIVALTAGQDRIVHGFEVQA-TGDGVKASAAPDYAMIGHEDNVCTLDVGPRGSYIVSGSWDKTAKVWREFQCVATLKGHQQAVWAV-VAVDEDRILTASADKTIRLWSIATPDRPLATFTGHSDAVRGLVLLDGG 212
BLAST of mRNA_S-firma_F_contig10196.305.1 vs. uniprot
Match: A0A077R4W5_9BASI (Related to DOA1-involved in ubiquitin-dependent proteolysis n=1 Tax=Melanopsichium pennsylvanicum 4 TaxID=1398559 RepID=A0A077R4W5_9BASI) HSP 1 Score: 67.8 bits (164), Expect = 2.320e-10 Identity = 48/103 (46.60%), Postives = 59/103 (57.28%), Query Frame = 1
Query: 151 TLEGHTSAVPALTCGASGD-IVSCSYDKAVKVWRDHTCVLACVGHTLAVFCVAVSLVDGS-IVSGSADNTAKV--CSSTGECVATLKGHTDWVRGLCVLENGE 447
TL GHT V AL G IVS S+DK KVWR+ CV GH +V+ AV VD +++ SAD T K+ SS + +A GHTD VRGL +LE GE
Sbjct: 120 TLIGHTENVCALDVEQHGKYIVSGSWDKTAKVWRNWECVATFKGHEQSVW--AVLAVDHDRVLTASADKTIKLWSISSPSKPIAVFGGHTDAVRGLTLLEGGE 220
BLAST of mRNA_S-firma_F_contig10196.305.1 vs. uniprot
Match: R9PD22_PSEHS (Uncharacterized protein n=1 Tax=Pseudozyma hubeiensis (strain SY62) TaxID=1305764 RepID=R9PD22_PSEHS) HSP 1 Score: 67.4 bits (163), Expect = 3.160e-10 Identity = 46/103 (44.66%), Postives = 60/103 (58.25%), Query Frame = 1
Query: 151 TLEGHTSAVPALTCGASGD-IVSCSYDKAVKVWRDHTCVLACVGHTLAVFCVAVSLVDGS-IVSGSADNTAKV--CSSTGECVATLKGHTDWVRGLCVLENGE 447
TL GHT V AL A G +VS S+DK K+WRD CV GH +V+ AV VD +++ SAD T ++ S+ + +A GHTD VRGL +LE GE
Sbjct: 120 TLIGHTENVCALDVDAHGRYLVSGSWDKTAKIWRDWECVATLKGHEQSVW--AVLAVDQDRVLTASADKTIRLWSISNPSKPLAIFGGHTDAVRGLTLLEGGE 220
BLAST of mRNA_S-firma_F_contig10196.305.1 vs. uniprot
Match: A0A0F7S152_9BASI (Related to DOA1-involved in ubiquitin-dependent proteolysis n=1 Tax=Sporisorium scitamineum TaxID=49012 RepID=A0A0F7S152_9BASI) HSP 1 Score: 66.6 bits (161), Expect = 5.850e-10 Identity = 45/103 (43.69%), Postives = 59/103 (57.28%), Query Frame = 1
Query: 151 TLEGHTSAVPALTCGASGD-IVSCSYDKAVKVWRDHTCVLACVGHTLAVFCVAVSLVDGS-IVSGSADNTAKVCSSTGEC--VATLKGHTDWVRGLCVLENGE 447
TL GHT V AL G G +VS S+DK K+WR+ CV GH +V+ AV VD +++ SAD T ++ S + +A GHTD VRGL +LE GE
Sbjct: 120 TLIGHTENVCALDVGPHGQYLVSGSWDKTAKIWRNWECVATLKGHEQSVW--AVLAVDQDRVLTASADKTIRLWSISNPTKPLAVFGGHTDAVRGLTLLEGGE 220
BLAST of mRNA_S-firma_F_contig10196.305.1 vs. uniprot
Match: I2FYN0_USTH4 (Related to DOA1-involved in ubiquitin-dependent proteolysis n=2 Tax=Ustilago TaxID=5269 RepID=I2FYN0_USTH4) HSP 1 Score: 66.2 bits (160), Expect = 7.970e-10 Identity = 46/103 (44.66%), Postives = 58/103 (56.31%), Query Frame = 1
Query: 151 TLEGHTSAVPALTCGASGD-IVSCSYDKAVKVWRDHTCVLACVGHTLAVFCVAVSLVDGS-IVSGSADNTAKV--CSSTGECVATLKGHTDWVRGLCVLENGE 447
TL GH V L G G IVS S+DK KVWR+ CV GH +V+ AV VD +++ SAD T ++ SS + +A GHTD VRGL +LE GE
Sbjct: 120 TLVGHQENVCTLDIGPHGQYIVSGSWDKTAKVWRNWECVATLKGHEQSVW--AVLAVDHDRVLTASADKTIRLWSISSPAKPLAVFGGHTDAVRGLTLLEGGE 220
BLAST of mRNA_S-firma_F_contig10196.305.1 vs. uniprot
Match: A0A066V922_TILAU (WD40 repeat-like protein (Fragment) n=1 Tax=Tilletiaria anomala (strain ATCC 24038 / CBS 436.72 / UBC 951) TaxID=1037660 RepID=A0A066V922_TILAU) HSP 1 Score: 65.9 bits (159), Expect = 8.600e-10 Identity = 41/102 (40.20%), Postives = 59/102 (57.84%), Query Frame = 1
Query: 151 TLEGHTSAVPALTCGASGD-IVSCSYDKAVKVWRDHTCVLACVGHTLAVFCVAVSLVDGSIVSGSADNTAKV--CSSTGECVATLKGHTDWVRGLCVLENGE 447
TL GH + +L G G IVS S+DK KVW+D CV GH AV+ V +++ + I++ SAD ++ SS + +AT GH D VRGL +L+ G+
Sbjct: 65 TLLGHEENICSLDAGPGGSYIVSGSWDKTAKVWKDWKCVATLKGHAHAVWAV-LAVDEDRILTASADKLIRLWSISSPSKPIATFSGHLDAVRGLSLLQGGK 165 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10196.305.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10196.305.1 >prot_S-firma_F_contig10196.305.1 ID=prot_S-firma_F_contig10196.305.1|Name=mRNA_S-firma_F_contig10196.305.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=149bp MASPACFEEVAFFSLQEDPVFSIVAVPGGGFATGHHPVIRLWSGEGVLEAback to top mRNA from alignment at S-firma_F_contig10196:4441..4887- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10196.305.1 ID=mRNA_S-firma_F_contig10196.305.1|Name=mRNA_S-firma_F_contig10196.305.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=447bp|location=Sequence derived from alignment at S-firma_F_contig10196:4441..4887- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10196:4441..4887- >mRNA_S-firma_F_contig10196.305.1 ID=mRNA_S-firma_F_contig10196.305.1|Name=mRNA_S-firma_F_contig10196.305.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=894bp|location=Sequence derived from alignment at S-firma_F_contig10196:4441..4887- (Sphaerotrichia firma ET2_F female)back to top |