mRNA_S-firma_F_contig10186.289.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10186.289.1 vs. uniprot
Match: D7FL28_ECTSI (Midasin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL28_ECTSI) HSP 1 Score: 168 bits (425), Expect = 1.110e-44 Identity = 99/176 (56.25%), Postives = 110/176 (62.50%), Query Frame = 1
Query: 55 EIISLRRQVDRAASLAETVRRQTIAVPDEPRKAGDGNGEAVSGGXXXAGKKTPASCFCWSDGVLVEDLERGD*VVLDGANLCSASVLDRLNPLLEPGGVLPLTECGTSSDNXXXXXXXXXXXXXXXDPDAPAEAPESAAPSKAASSHRVVRPHPNFRLFLAADPSCGEVSRAMRNR 582
E SL R V+RA +LA TVR+Q A XX K + ASCFCWSDGVLV+ LERGD VVLDGANLCS+SVLDRLNPLLEPGGVLPLTECGTSS N + A +++SHR +RPHPNFRLFL ADPSCGEVSRAMRNR
Sbjct: 1767 ETNSLERWVERAVALATTVRQQ--AATXXXXXXXXXXXXXXXXXXXRGRKSSSASCFCWSDGVLVQALERGDWVVLDGANLCSSSVLDRLNPLLEPGGVLPLTECGTSSGNG-----------------------QEGANGASSTSHRTIRPHPNFRLFLTADPSCGEVSRAMRNR 1917
BLAST of mRNA_S-firma_F_contig10186.289.1 vs. uniprot
Match: A0A6H5JCJ9_9PHAE (Midasin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCJ9_9PHAE) HSP 1 Score: 164 bits (416), Expect = 1.790e-43 Identity = 95/176 (53.98%), Postives = 110/176 (62.50%), Query Frame = 1
Query: 55 EIISLRRQVDRAASLAETVRRQTIAVPDEPRKAGDGNGEAVSGGXXXAGKKTPASCFCWSDGVLVEDLERGD*VVLDGANLCSASVLDRLNPLLEPGGVLPLTECGTSSDNXXXXXXXXXXXXXXXDPDAPAEAPESAAPSKAASSHRVVRPHPNFRLFLAADPSCGEVSRAMRNR 582
E++SL R+V+RAA+LA ++ V D A + SG + + ASCFCWSDGVLV+ LERGD +VLDGANLCSASVLDRLNPLLEPGGVLPLTECGTSS A+P+ HR +RPH NFRLFL ADPSCGEVSRAMRNR
Sbjct: 592 EVLSLNRRVERAAALATNLQH---TVTDAALLANAESSVGGSGDGAPGRRSSRASCFCWSDGVLVQALERGDWIVLDGANLCSASVLDRLNPLLEPGGVLPLTECGTSS---------------------------GASPT----GHRTIRPHSNFRLFLTADPSCGEVSRAMRNR 733
BLAST of mRNA_S-firma_F_contig10186.289.1 vs. uniprot
Match: A0A7S1ZU90_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZU90_9STRA) HSP 1 Score: 107 bits (267), Expect = 1.510e-23 Identity = 62/127 (48.82%), Postives = 74/127 (58.27%), Query Frame = 1
Query: 202 KKTPASCFCWSDGVLVEDLERGD*VVLDGANLCSASVLDRLNPLLEPGGVLPLTECGTSSDNXXXXXXXXXXXXXXXDPDAPAEAPESAAPSKAASSHRVVRPHPNFRLFLAADPSCGEVSRAMRNR 582
K T S F W DG+LV+ +ERGD + L+ AN CSASVLDRLNP++E GG L L EC SSD+ + P A HRVV HPNFRLFL+ +P+ GEVSRAMRNR
Sbjct: 477 KATGGSHFRWVDGILVKAMERGDWLHLENANFCSASVLDRLNPIMEQGGELILAECSVSSDDQ--------------------KHPHQA--------HRVVTRHPNFRLFLSMNPTSGEVSRAMRNR 575
BLAST of mRNA_S-firma_F_contig10186.289.1 vs. uniprot
Match: E1Z330_CHLVA (LysM domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z330_CHLVA) HSP 1 Score: 103 bits (258), Expect = 2.730e-22 Identity = 61/129 (47.29%), Postives = 68/129 (52.71%), Query Frame = 1
Query: 196 AGKKTPASCFCWSDGVLVEDLERGD*VVLDGANLCSASVLDRLNPLLEPGGVLPLTECGTSSDNXXXXXXXXXXXXXXXDPDAPAEAPESAAPSKAASSHRVVRPHPNFRLFLAADPSCGEVSRAMRNR 582
AG ++ A F W DG L +ERG V+LD ANLC+ +VLDRLNPLLEP GVL L ECG R+VRPHPNFRLFLA DP GEVSRAMRNR
Sbjct: 2532 AGAESAAGKFEWVDGALTRAVERGGWVLLDSANLCNPTVLDRLNPLLEPQGVLLLNECGGGG------------------------------------GARIVRPHPNFRLFLALDPRHGEVSRAMRNR 2624
BLAST of mRNA_S-firma_F_contig10186.289.1 vs. uniprot
Match: A0A2P6V0F8_9CHLO (Type A von Willebrand factor domain-containing isoform A n=2 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V0F8_9CHLO) HSP 1 Score: 103 bits (258), Expect = 2.800e-22 Identity = 66/146 (45.21%), Postives = 74/146 (50.68%), Query Frame = 1
Query: 148 KAGDGNGEAVSGGXXXAGK-KTPASCFCWSDGVLVEDLERGD*VVLDGANLCSASVLDRLNPLLEPGGVLPLTECGTSSDNXXXXXXXXXXXXXXXDPDAPAEAPESAAPSKAASSHRVVRPHPNFRLFLAADPSCGEVSRAMRNR 582
+AGD G AG ++ A F W DG L +E G V+LD ANLC+ +VLDRLNPLLEP GVL L ECG S+ RVVRPHPNFRLFLA DP GEVSRAMRNR
Sbjct: 2501 QAGDAGGATAELAASLAGGGESAAGKFEWVDGALTRAIEGGQWVLLDSANLCNPTVLDRLNPLLEPHGVLLLNECGGSNGGA-----------------------------------RVVRPHPNFRLFLALDPRHGEVSRAMRNR 2611
BLAST of mRNA_S-firma_F_contig10186.289.1 vs. uniprot
Match: A0A4D9D334_9STRA (VWFA domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D334_9STRA) HSP 1 Score: 103 bits (257), Expect = 3.810e-22 Identity = 61/120 (50.83%), Postives = 69/120 (57.50%), Query Frame = 1
Query: 223 FCWSDGVLVEDLERGD*VVLDGANLCSASVLDRLNPLLEPGGVLPLTECGTSSDNXXXXXXXXXXXXXXXDPDAPAEAPESAAPSKAASSHRVVRPHPNFRLFLAADPSCGEVSRAMRNR 582
F W DG LVE LERG ++L NLC ASVLDRLN LLEP G L LTE GTS + +AAP+ R++RPHP+FRLFL DPS GEVSRAMRNR
Sbjct: 2621 FAWVDGPLVEALERGHWLLLTNVNLCPASVLDRLNALLEPNGSLLLTEAGTSPSSS-----------------------RNAAPAP-----RILRPHPSFRLFLTMDPSVGEVSRAMRNR 2712
BLAST of mRNA_S-firma_F_contig10186.289.1 vs. uniprot
Match: A0A2P6TJ35_CHLSO (Type A von Willebrand factor domain-containing n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TJ35_CHLSO) HSP 1 Score: 103 bits (256), Expect = 5.180e-22 Identity = 60/128 (46.88%), Postives = 69/128 (53.91%), Query Frame = 1
Query: 199 GKKTPASCFCWSDGVLVEDLERGD*VVLDGANLCSASVLDRLNPLLEPGGVLPLTECGTSSDNXXXXXXXXXXXXXXXDPDAPAEAPESAAPSKAASSHRVVRPHPNFRLFLAADPSCGEVSRAMRNR 582
G ++ A F W DG L +ERG V+LD ANLC+ +VLDRLNPLLEP GVL L ECG ++ RVVRPHPNFRL+LA DP GEVSRAMRNR
Sbjct: 2494 GAESVAGKFEWVDGALTRAIERGQWVLLDSANLCNPTVLDRLNPLLEPQGVLLLNECGGGGG----------------------------------ATARVVRPHPNFRLYLALDPRHGEVSRAMRNR 2587
BLAST of mRNA_S-firma_F_contig10186.289.1 vs. uniprot
Match: A0A6G1L7T7_9PEZI (Midasin n=1 Tax=Teratosphaeria nubilosa TaxID=161662 RepID=A0A6G1L7T7_9PEZI) HSP 1 Score: 101 bits (251), Expect = 2.400e-21 Identity = 57/122 (46.72%), Postives = 68/122 (55.74%), Query Frame = 1
Query: 217 SCFCWSDGVLVEDLERGD*VVLDGANLCSASVLDRLNPLLEPGGVLPLTECGTSSDNXXXXXXXXXXXXXXXDPDAPAEAPESAAPSKAASSHRVVRPHPNFRLFLAADPSCGEVSRAMRNR 582
+CF W+DGVLV L++G V+LD ANLCSASVLDRLN LLEP G L + E +KA S ++VRPHPNFR+FL DP GE+SRAMRNR
Sbjct: 2163 ACFSWTDGVLVNALQQGKWVILDNANLCSASVLDRLNGLLEPNGSLVINEH-----------------------------------TKADGSPQIVRPHPNFRIFLTVDPRYGELSRAMRNR 2249
BLAST of mRNA_S-firma_F_contig10186.289.1 vs. uniprot
Match: A0A7S4K6U7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K6U7_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 2.030e-20 Identity = 58/129 (44.96%), Postives = 69/129 (53.49%), Query Frame = 1
Query: 196 AGKKTPASCFCWSDGVLVEDLERGD*VVLDGANLCSASVLDRLNPLLEPGGVLPLTECGTSSDNXXXXXXXXXXXXXXXDPDAPAEAPESAAPSKAASSHRVVRPHPNFRLFLAADPSCGEVSRAMRNR 582
AG K F W DG+LV L+ G + L+ N C +SVLDRLNPL+E GG L LTECG + DA + P RVVR HP+FR+FL+ DPS GEVSRAMRNR
Sbjct: 220 AGGKKKGGLFRWVDGILVRALQNGHWLHLENVNFCPSSVLDRLNPLMESGGELVLTECGVGGN------------------DADDDDGNGGGP-------RVVRAHPDFRIFLSMDPSFGEVSRAMRNR 323
BLAST of mRNA_S-firma_F_contig10186.289.1 vs. uniprot
Match: C4Y9D9_CLAL4 (Uncharacterized protein n=1 Tax=Clavispora lusitaniae (strain ATCC 42720) TaxID=306902 RepID=C4Y9D9_CLAL4) HSP 1 Score: 97.8 bits (242), Expect = 3.800e-20 Identity = 58/127 (45.67%), Postives = 69/127 (54.33%), Query Frame = 1
Query: 202 KKTPASCFCWSDGVLVEDLERGD*VVLDGANLCSASVLDRLNPLLEPGGVLPLTECGTSSDNXXXXXXXXXXXXXXXDPDAPAEAPESAAPSKAASSHRVVRPHPNFRLFLAADPSCGEVSRAMRNR 582
K+T F W DG+LV+ + RGD +VLD ANLC+ASVLDRLN LLE G L + EC AP+ S RV++PHPNFRLFL DP GE+SRAMRNR
Sbjct: 2212 KETATVKFKWFDGLLVQSVMRGDWLVLDNANLCNASVLDRLNSLLETNGSLIINECS---------------------------APDG--------SPRVLKPHPNFRLFLTVDPKYGELSRAMRNR 2303 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10186.289.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10186.289.1 >prot_S-firma_F_contig10186.289.1 ID=prot_S-firma_F_contig10186.289.1|Name=mRNA_S-firma_F_contig10186.289.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=149bp MSHGRRATAMVRPSAAAAVEPGKKRLRRVSAGATGCWWRIWRGATEWCWTback to top mRNA from alignment at S-firma_F_contig10186:3638..4692+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10186.289.1 ID=mRNA_S-firma_F_contig10186.289.1|Name=mRNA_S-firma_F_contig10186.289.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=1055bp|location=Sequence derived from alignment at S-firma_F_contig10186:3638..4692+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10186:3638..4692+ >mRNA_S-firma_F_contig10186.289.1 ID=mRNA_S-firma_F_contig10186.289.1|Name=mRNA_S-firma_F_contig10186.289.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=894bp|location=Sequence derived from alignment at S-firma_F_contig10186:3638..4692+ (Sphaerotrichia firma ET2_F female)back to top |