mRNA_S-firma_F_contig10154.261.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10154.261.1 vs. uniprot
Match: A0A7S1CJR5_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CJR5_9STRA) HSP 1 Score: 185 bits (469), Expect = 2.580e-55 Identity = 96/206 (46.60%), Postives = 132/206 (64.08%), Query Frame = 1
Query: 1 LTPELAPATIACIADSFHYKAADA--DPFSSILNLHKHHWEKMASMFVERSAADPRHLSVVALNEDTGRIDGAMINEDWKEPQPTAYKELNSDSWRPVRAVFNELHTRYRASSSLIIRNDILHSLYFTCVHPGARNEGIMKGMWEITLQNAKDYNYNALVAEASRHSVRDIFDNKLGLLEVARVDFDDFKFEGQTVFKELPEENPE 612
LTP+L CIA +F + + DPFS + NL KHHW MA MFVER+A + +S+V LN++TG +DG M+NEDWK P AY++L+SD WRPVRA FN+LHTR+++ I+ ++ H+L FTC P A+ GI + +W +++ A+++N+ VAEAS S R D LG EVA V F D+ FEGQ V E EE P+
Sbjct: 23 LTPDLVKPATECIATTFAVSSTGSSPDPFSWLFNLRKHHWRSMAGMFVERAAHES--ISLVCLNDETGDVDGVMLNEDWKLHAPPAYRQLSSD-WRPVRAAFNDLHTRFKSRGPHIMDGEVFHALIFTCTRPEAQGSGINRELWRRSMETAQNHNFKEFVAEASTASTRRALD-ALGFREVASVPFADWLFEGQEVLSEAAEEKPD 224
BLAST of mRNA_S-firma_F_contig10154.261.1 vs. uniprot
Match: A0A5A8EEW1_CAFRO (N-acetyltransferase domain-containing protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EEW1_CAFRO) HSP 1 Score: 172 bits (436), Expect = 1.780e-50 Identity = 91/204 (44.61%), Postives = 126/204 (61.76%), Query Frame = 1
Query: 1 LTPELAPATIACIADSFHYKAADADPFSSILNLHKHHWEKMASMFVERSAADPRHLSVVALNEDTGRIDGAMINEDWKEPQPTAYKELNSDSWRPVRAVFNELHTRYRASSSL-IIRNDILHSLYFTCVHPGARNEGIMKGMWEITLQNAKDYNYNALVAEASRHSVRDIFDNKLGLLEVARVDFDDFKFEGQTVFKELPEENP 609
LTPE APA C+A+SF + + DPF++ L +H W +MA FV+R+A VV +NED +D M+NED++ P Y+ L ++ WRPVRA F ELHTR++A+ S + +ILH LYFTCV P R +G+MK +W+ T A+DY Y LVAEA VR + + LG EVA V++ D++FEG T + L NP
Sbjct: 12 LTPENAPAAARCVAESFAHPQS-RDPFTTQFKLQRHQWFRMAYPFVQRAADATNPKGVVVMNEDGETVDAVMVNEDFRMAPPPEYRLLPAE-WRPVRACFRELHTRFKANYSRPVAEGEILHCLYFTCVRPEVRGQGLMKALWDETQVVARDYGYKHLVAEAPTREVRSVLEESLGFKEVAAVEYADWRFEGATPTEALALANP 213
BLAST of mRNA_S-firma_F_contig10154.261.1 vs. uniprot
Match: A0A7S4IIT0_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IIT0_9EUKA) HSP 1 Score: 163 bits (413), Expect = 4.140e-47 Identity = 87/211 (41.23%), Postives = 132/211 (62.56%), Query Frame = 1
Query: 1 LTPELAPATIACIADSFHYKAADADPFSSILNLHKHHWEKMASMFVERSAADPRHLSVVALNEDTGRIDGAMINEDWKEPQPTAYKELNSDSWRPVRAVFNELHTRYRASSSLIIR-NDILHSLYFTCVHPGARNEGIMKGMWEITLQNAKDYNYNALVAEASRHSVRDIFDNKLGLLEVARVDFDDFKFEGQTVFKELPEENPEFTALCV 630
LTP + CIA+SF DPFS + L W M+ MFVER+A + LSV+A+N G ++G M+NEDWKE +P Y +L S+ WRP+RA+FN+LH Y+A S I+ ++ILH LYF+C+ P R +G++ ++ +L+ A DY+++ +V E+S S I +LG E+A+V++ F ++G+TVF LP NPE+ L +
Sbjct: 11 LTPAYVGRAVDCIANSF-----SDDPFSKVSGLQAGDWAAMSGMFVERAAT--KDLSVIAVNTTNGNVEGVMLNEDWKEKKPEEYSKL-SEKWRPIRAIFNKLHISYKARHSRYIQPHEILHPLYFSCIRPELRRQGLIGQLFNKSLEIASDYHFDTVVCESSTTSTA-IACGQLGFREIAQVEYRTFLYKGETVFYPLPGMNPEYQKLTI 212
BLAST of mRNA_S-firma_F_contig10154.261.1 vs. uniprot
Match: A0A2P6NBN9_9EUKA (N-acetyltransferase domain-containing protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NBN9_9EUKA) HSP 1 Score: 141 bits (356), Expect = 3.480e-38 Identity = 78/189 (41.27%), Postives = 112/189 (59.26%), Query Frame = 1
Query: 28 IACIADSFHYKAADADPFSSILNLHKHHWEKMASMFVERSAADPRHLSVVALNEDTGRIDGAMINEDWKEPQPTAYKELNSDSWRPVRAVFNELHTRYRASSSLIIRNDILHSLYFTCVHPGARNEGIMKGMWEITLQNAKDYNYNALVAEASRHSVRDIFDNKLGLLEVARVDFDDFKFEGQTVFKEL 594
+ CI+ SF + DPF+ L L W M+ MFV+R+A + +S++A + D + G +INEDWKE P+ Y +L WRPVRA+FN+LH R++A+ I + H LYFTCV P RN GI +W +L A++ NY +V EAS S + KLG EVA +D+ +F F+G+ VF +L
Sbjct: 52 VECISRSF---SKSNDPFTRALKLTPTQWGVMSQMFVQRAAH--QDMSLIAYDPDVDEVKGVIINEDWKETPPSDYHQLMD--WRPVRAMFNDLHIRFKATQPRIEAGRLFHPLYFTCVRPETRNSGIATELWLRSLDIARERNYTDIVCEASAASSVSLC-KKLGFREVAGIDYQNFMFDGKFVFADL 232
BLAST of mRNA_S-firma_F_contig10154.261.1 vs. uniprot
Match: Q54VC5_DICDI (Uncharacterized protein n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q54VC5_DICDI) HSP 1 Score: 139 bits (350), Expect = 1.340e-37 Identity = 72/211 (34.12%), Postives = 126/211 (59.72%), Query Frame = 1
Query: 1 LTPELAPATIACIADSFHYKAADADPFSSILNLHKHHWEKMASMFVERSAADPRHLSVVALNEDTGRIDGAMINEDWKEPQPTAYKELNSDSWRPVRAVFNELHTRYRASSSLIIR-NDILHSLYFTCVHPGARNEGIMKGMWEITLQNAKDYNYNALVAEASRHSVRDIFDNKLGLLEVARVDFDDFKFEGQTVFKELPEENPEFTALCV 630
LTP + P + I SF DPFS LNL+K++W +MA++FV+R+A + LS+VA++ +T +I G +INEDWK +P + W PV+++F+ LH +Y+ IR +I+HSLYFTCV P +R +G+ MW + + +N+ + AE + S + + ++ +G + + ++ F+++G+ +F++LP+ N F L +
Sbjct: 14 LTPNMVPKVVDSITKSFA-----TDPFSIALNLNKNNWTEMATLFVDRAAK--KDLSLVAIDNETDQIVGCIINEDWKTREPEEFHTSLDKKWEPVKSMFSNLHHKYKKEHPNTIRFGEIIHSLYFTCVVPSSRGQGVAYDMWYHSTDIGRAHNFQYMCAETATVSGQKLCEH-IGFTPKSSIPYNKFEYQGERIFQKLPQINTNFEKLTI 216
BLAST of mRNA_S-firma_F_contig10154.261.1 vs. uniprot
Match: A0A257MXG7_9GAMM (N-acetyltransferase domain-containing protein n=1 Tax=Methylococcaceae bacterium NSM2-1 TaxID=1917482 RepID=A0A257MXG7_9GAMM) HSP 1 Score: 62.8 bits (151), Expect = 2.140e-8 Identity = 40/147 (27.21%), Postives = 75/147 (51.02%), Query Frame = 1
Query: 154 DPRHLSVVALNEDTGRIDGAMINEDWKEPQPTAYKELNSDSWRPVRAVFNELHTRYRASSSLIIRNDILHSLYFTCVHPGARNEGIMKGMWEITLQNAKDYNYNALVAEASRHSVRDIFDNKLGLLEVARVDFDDFKFEGQTVFKEL 594
+ L+V+A N+DT +I GAM+ +D+ P + L D++ P+ AV +EL T+Y+ ++ + + LH L+ V + + K + + L+N Y + EA+ + IF K G ++ + F F+G+ VF+ +
Sbjct: 85 EQEELTVIARNQDTNQIIGAMVTDDFAIEPPEEMRHLG-DNFEPLWAVLDELDTQYK-QGRILPKGEYLH-LFLLAVDHRQSGKNVAKNLVQTCLENGIRNGYKTGIVEATGVVSQHIF-RKFGFVDRFEAPYKTFTFQGKPVFESI 227
BLAST of mRNA_S-firma_F_contig10154.261.1 vs. uniprot
Match: A0A257N7Z7_9GAMM (Uncharacterized protein n=1 Tax=Methylococcaceae bacterium NSM2-1 TaxID=1917482 RepID=A0A257N7Z7_9GAMM) HSP 1 Score: 62.4 bits (150), Expect = 2.170e-8 Identity = 42/152 (27.63%), Postives = 77/152 (50.66%), Query Frame = 1
Query: 151 ADPRHLSVVALNEDTGRIDGAMINEDWKEPQPTAYKELNSDSWRPVRAVFNELHTRYRASSSLIIRNDILHSLYFTCVHPGARNEGIMKGMWEITLQNAKDYNYNALVAEA----SRHSVRDIFDNKLGLLEVARVDFDDFKFEGQTVFKEL 594
A+ L+V+A N+DT +I GAM+ +D+ P + L D++ PV A+ ++L ++Y+ ++ + + LH L H + + K + + L+N Y VAEA S+H R K G ++ + + F F+G+ VF+ +
Sbjct: 58 AEQEELTVIARNQDTNQIIGAMVADDFALEPPEEIRHLG-DNFGPVWAILDDLDSQYK-QGRILPKGEYLHLLLLAVDHRQT-GKNVAKNLLKTCLENGAGKGYRTGVAEATGLVSQHICR-----KFGFVDRFEIPYKTFTFQGKRVFESI 201 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10154.261.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10154.261.1 >prot_S-firma_F_contig10154.261.1 ID=prot_S-firma_F_contig10154.261.1|Name=mRNA_S-firma_F_contig10154.261.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=210bp LTPELAPATIACIADSFHYKAADADPFSSILNLHKHHWEKMASMFVERSAback to top mRNA from alignment at S-firma_F_contig10154:4483..5112- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10154.261.1 ID=mRNA_S-firma_F_contig10154.261.1|Name=mRNA_S-firma_F_contig10154.261.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=630bp|location=Sequence derived from alignment at S-firma_F_contig10154:4483..5112- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10154:4483..5112- >mRNA_S-firma_F_contig10154.261.1 ID=mRNA_S-firma_F_contig10154.261.1|Name=mRNA_S-firma_F_contig10154.261.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1260bp|location=Sequence derived from alignment at S-firma_F_contig10154:4483..5112- (Sphaerotrichia firma ET2_F female)back to top |