mRNA_S-firma_F_contig1015.257.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig1015.257.1 vs. uniprot
Match: A0A6H5KZ48_9PHAE (LMWPc domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZ48_9PHAE) HSP 1 Score: 210 bits (535), Expect = 1.970e-62 Identity = 102/136 (75.00%), Postives = 118/136 (86.76%), Query Frame = 1
Query: 1 YKTEGLTNFQGQEPDVRIEIEAAQRRITTRGLYLKDGGGVRALIPADFDKYDVILGIDDDNLEAVLTAAEYWGKADLAAKKTRTLLSYCTKYLQVKKIPNPYYAGKDGFEHLVNVIQHAVDNLFEKCLRGEALSYD 408
YK G F+GQEPD RIE+ AAQRRITTRGL +K GGG R L PAD DK+DVILGIDDDN+EA++TAA++WGK D+AAKKTR+LLSY TKY +VK IPNPYYAG++GFE LV++IQHAVDNLFEKCLRGEALSYD
Sbjct: 153 YKEGGEALFRGQEPDPRIEVTAAQRRITTRGLDMK-GGGSRPLTPADLDKFDVILGIDDDNVEAIMTAAKHWGKGDIAAKKTRSLLSYGTKYPEVKTIPNPYYAGREGFEVLVDIIQHAVDNLFEKCLRGEALSYD 287
BLAST of mRNA_S-firma_F_contig1015.257.1 vs. uniprot
Match: A0A6H5L511_9PHAE (LMWPc domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L511_9PHAE) HSP 1 Score: 107 bits (267), Expect = 2.180e-23 Identity = 57/138 (41.30%), Postives = 79/138 (57.25%), Query Frame = 1
Query: 1 YKTEGLTNFQGQEPDVRIEIEAAQRRITTRGLYLKDGGGVRALIPADFDKYDVILGIDDDNLEAVLTAAEYWGKADLAAKKTRTLLSYCTKYLQVKKIPNPYYAGKD------GFEHLVNVIQHAVDNLFEKCLRGEA 396
YK G + G PD R+ AA+R G+ L G R L P DFDK+D+++G+D+ N +A+ TAAE+WGK+ A K RT+ SYC VK +P+PYY G GFE +++++ A L EKC GEA
Sbjct: 128 YKEGGESYHTGDSPDARMTAAAAKR-----GVMLS--GASRPLTPGDFDKFDLVVGMDEANTKAMSTAAEHWGKSQEAISKLRTITSYCRSSGDVKSVPDPYYGGPQVGKSAGGFETVLDLLDDACQGLLEKCRAGEA 258
BLAST of mRNA_S-firma_F_contig1015.257.1 vs. uniprot
Match: A0A0G4EHG9_VITBC (LMWPc domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EHG9_VITBC) HSP 1 Score: 94.7 bits (234), Expect = 5.780e-19 Identity = 43/131 (32.82%), Postives = 78/131 (59.54%), Query Frame = 1
Query: 1 YKTEGLTNFQGQEPDVRIEIEAAQR--RITTRGLYLKDGGGVRALIPADFDKYDVILGIDDDNLEAVLTAAEYWGKADLAAKKTRTLLSYCTKYLQVKKIPNPYYAGKDGFEHLVNVIQHAVDNLFEKCLR 387
YK +G + +G+ D R+ A +R R+T+R R L P DFD++D+++G+++ N + + AA WG+ D A +KT + YC +Y V +P+PYY G+ GFE ++++++ A + L +K ++
Sbjct: 100 YKPDGFSYHEGEPSDERMSTAAKKRGIRLTSRS---------RPLRPDDFDRFDLVIGMEEKNRQEIFRAARAWGRLDEAVRKTVLMTDYCREYGDVTAVPDPYYGGQKGFEKVLDLLEDACEGLLQKLVK 221
BLAST of mRNA_S-firma_F_contig1015.257.1 vs. uniprot
Match: A0A835ZBG2_9STRA (Phosphotyrosine protein phosphatase I superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBG2_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 8.120e-19 Identity = 47/123 (38.21%), Postives = 75/123 (60.98%), Query Frame = 1
Query: 1 YKTEGLTNFQGQEPDVRIEIEAAQRRITTRGLYLKDGGGVRALIPADFDKYDVILGIDDDNLEAVLTAAEYWGKADLAAKKTRTLLSYCTKYLQVKKIPNPYYAGKDGFEHLVNVIQHAVDNL 369
Y+ G + +G D R+ AAQR G++L R + P+D D++D+I+G+D N +AV+ AA YWGK +LA K R + SYCTK+ +P+PYY G +GFE ++++++ A + L
Sbjct: 81 YRDGGRSYHEGDPADARMTEAAAQR-----GVHLTSIS--RPMRPSDLDEFDLIIGMDGANKQAVIEAAHYWGKKELAEAKLRNMTSYCTKHKSAT-VPDPYYGGPEGFEKVLDLLEDACEGL 195
BLAST of mRNA_S-firma_F_contig1015.257.1 vs. uniprot
Match: A0A8K1C3T1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C3T1_PYTOL) HSP 1 Score: 85.9 bits (211), Expect = 2.710e-16 Identity = 45/130 (34.62%), Postives = 79/130 (60.77%), Query Frame = 1
Query: 1 YKTEGLTNFQGQEPDVRIEIEAAQR--RITTRGLYLKDGGGVRALIPADFDKYDVILGIDDDNLEAVLTAAEYWGKADLAA---KKTRTLLSYCTKYLQVKKIPNPYYAGKDGFEHLVNVIQHAVDNLFE 375
Y+ G + G+ D R++ EA +R +T+R R L P D +++D ++ ++D N AVL AAE WG A L A +KT+ + +YCTK+ VK++P+P+Y G GF+H++++++ A + L++
Sbjct: 52 YQEGGWSYHTGESSDSRMKKEAKKRGYNLTSRA---------RTLTPKDIEEFDYLICMEDKNRTAVLEAAEAWGGAPLRALAKEKTKMMTAYCTKFTDVKRVPDPWYEG--GFDHVLDLLEDACEGLYQ 170
BLAST of mRNA_S-firma_F_contig1015.257.1 vs. uniprot
Match: A0A0P8AY63_9GAMM (Protein-tyrosine-phosphatase n=2 Tax=unclassified Halomonas TaxID=2609666 RepID=A0A0P8AY63_9GAMM) HSP 1 Score: 79.0 bits (193), Expect = 5.160e-14 Identity = 45/120 (37.50%), Postives = 64/120 (53.33%), Query Frame = 1
Query: 31 GQEPDVRIEIEAAQRRITTRGLYLKDGGGVRALIPADFDKYDVILGIDDDNLEAVLTAAEYWGKADLAAKKTRTLLSYCTKYLQVKKIPNPYYAGKDGFEHLVNVIQHAVDNLFEKCLRG 390
G+ PD R + A QR I GL R L+P DF YD +LG+DDDNL A+L K + A LL + + +++P+PYY G DGFE ++N+++ A D L + RG
Sbjct: 47 GKAPDPRAQAAARQRGIDISGLR------ARQLVPQDFMDYDYVLGMDDDNLRAMLAM-----KPEQARAHVGLLLDFAD--VPEREVPDPYYGGDDGFEDVLNLLEAAADGLVDHLKRG 153
BLAST of mRNA_S-firma_F_contig1015.257.1 vs. uniprot
Match: A0A068UH34_COFCA (Acid phosphatase n=1 Tax=Coffea canephora TaxID=49390 RepID=A0A068UH34_COFCA) HSP 1 Score: 77.4 bits (189), Expect = 3.690e-13 Identity = 43/129 (33.33%), Postives = 73/129 (56.59%), Query Frame = 1
Query: 13 GLTNF-QGQEPDVRIEIEAAQRRITTRGLYLKDGGGVRALIPADFDKYDVILGIDDDNLEAVLTAAEYWGKADL----AAKKTRTLLSYCTKYLQVKKIPNPYYAGKDGFEHLVNVIQHAVDNLFEKCL 384
G N+ +G + D R+ + +R I + R + P+DF ++D+IL +D +N EA+L+A E W + AAKK R + SYC K+ + ++P+PYY G GFE +++++ A ++L E L
Sbjct: 56 GTINYHEGDQADPRMRAASKRRGIEITSIS-------RPIRPSDFREFDLILAMDRENREAILSAFERWRHREPLPADAAKKVRLMCSYCKKH-EEDEVPDPYYGGPQGFEKVLDLLDDACESLLESIL 176
BLAST of mRNA_S-firma_F_contig1015.257.1 vs. uniprot
Match: A0A6P6U1K8_COFAR (Acid phosphatase n=1 Tax=Coffea arabica TaxID=13443 RepID=A0A6P6U1K8_COFAR) HSP 1 Score: 77.0 bits (188), Expect = 1.740e-12 Identity = 43/129 (33.33%), Postives = 73/129 (56.59%), Query Frame = 1
Query: 13 GLTNF-QGQEPDVRIEIEAAQRRITTRGLYLKDGGGVRALIPADFDKYDVILGIDDDNLEAVLTAAEYWGKADL----AAKKTRTLLSYCTKYLQVKKIPNPYYAGKDGFEHLVNVIQHAVDNLFEKCL 384
G N+ +G + D R+ + +R I + R + P+DF ++D+IL +D +N EA+L+A E W + AAKK R + SYC K+ + ++P+PYY G GFE +++++ A ++L E L
Sbjct: 125 GTINYHEGDQADPRMRAASKRRGIEITSIS-------RPIRPSDFIEFDLILAMDRENREAILSAFERWRHREPLPADAAKKVRLMCSYCKKH-EEDEVPDPYYGGPQGFEKVLDLLDDACESLLESIL 245
BLAST of mRNA_S-firma_F_contig1015.257.1 vs. uniprot
Match: A0A8J7MFG2_9BACT (Low molecular weight phosphotyrosine protein phosphatase n=2 Tax=Persicirhabdus sediminis TaxID=454144 RepID=A0A8J7MFG2_9BACT) HSP 1 Score: 74.7 bits (182), Expect = 1.960e-12 Identity = 40/116 (34.48%), Postives = 66/116 (56.90%), Query Frame = 1
Query: 31 GQEPDVRIEIEAAQRRITTRGLYLKDGGGVRALIPADFDKYDVILGIDDDNLEAVLTAAEYWGKADLAAKKTRTLLSYCTKYLQVKKIPNPYYAGKDGFEHLVNVIQHAVDNLFEK 378
G+ PD R+ A+R T GG R ++ AD +D+IL +DDDNL V EY K D + K + + YC ++ + K++P+PYY G GFEH++++++ ++L E+
Sbjct: 52 GKLPDARMRKALARRNYPT-------GGAARQVVRADIQNFDLILTMDDDNLRNV---REYV-KDDSESAKVKRFVDYCERF-EDKEVPDPYYGGNGGFEHVLDLLEDGCESLLEE 155
BLAST of mRNA_S-firma_F_contig1015.257.1 vs. uniprot
Match: A0A1Y1IBR1_KLENI (Acid phosphatase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IBR1_KLENI) HSP 1 Score: 74.7 bits (182), Expect = 2.550e-12 Identity = 40/123 (32.52%), Postives = 67/123 (54.47%), Query Frame = 1
Query: 28 QGQEPDVRIEIEAAQRRITTRGLYLKDGGGVRALIPADFDKYDVILGIDDDNLEAVLTAAEYWGKA----DLAAKKTRTLLSYCTKYLQVKKIPNPYYAGKDGFEHLVNVIQHAVDNLFEKCL 384
QG D R+ AA+R + + R ++P+DF+K+DVIL +DD+N + A + W + A K R + SYC K+ K++P+PYY G +GFE ++++++ A L + L
Sbjct: 57 QGDPADGRMMRHAAKRGVKLTSIS-------RPVVPSDFEKFDVILAMDDNNERDLNKAFDKWSSQRPLPESARSKVRLMCSYCKKF-DDKEVPDPYYGGSEGFEKVLDLLEDACGGLLDSLL 171 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1015.257.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig1015.257.1 >prot_S-firma_F_contig1015.257.1 ID=prot_S-firma_F_contig1015.257.1|Name=mRNA_S-firma_F_contig1015.257.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=137bp YKTEGLTNFQGQEPDVRIEIEAAQRRITTRGLYLKDGGGVRALIPADFDKback to top mRNA from alignment at S-firma_F_contig1015:22037..24613- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig1015.257.1 ID=mRNA_S-firma_F_contig1015.257.1|Name=mRNA_S-firma_F_contig1015.257.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=2577bp|location=Sequence derived from alignment at S-firma_F_contig1015:22037..24613- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig1015:22037..24613- >mRNA_S-firma_F_contig1015.257.1 ID=mRNA_S-firma_F_contig1015.257.1|Name=mRNA_S-firma_F_contig1015.257.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=822bp|location=Sequence derived from alignment at S-firma_F_contig1015:22037..24613- (Sphaerotrichia firma ET2_F female)back to top |