mRNA_S-firma_F_contig10145.247.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10145.247.1 vs. uniprot
Match: D7G4W1_ECTSI (Lactamase_B domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4W1_ECTSI) HSP 1 Score: 428 bits (1100), Expect = 1.130e-145 Identity = 206/242 (85.12%), Postives = 221/242 (91.32%), Query Frame = 1
Query: 7 RVRHVQIDTGKTWREGVIRWFPRHGVPGIDGIILTHDHADAMLGLDDVRSVQAPRKERASTPVFVSEQTDRSVRRVFPYLVGREDDNGRGGRYVAALKFNAFQDFEPFEVGGLEVTPFPVLHGEDYVSHGFLFGPERNKVCYISDVSRVPPESMEFLQRQGPMQLLVCDALTRSQKHPTHFSVEDSVVLAGQLKARRTLLVGLGSDIEYHATNALLASREEASPDMPHVRLAYDGLAVDVDL 732
+V+HVQIDTGKTWREG IRWFPRHGV G+DGI+LTHDHADAMLGLDDVRS+Q RK R TPV VSE+TDRSVRRVFPYLVGREDDNG GGR+VAAL FN FQDF+PFEVGGLE+TPFPV+HGEDYVSHGFLFGPE NK+CYISDVSRVPPESMEFL++ GPMQLLVCDAL S+KH THF VEDSVVLAGQLKARRTLLVGLGSDIEYHATNA+LASREE MPHVRLAYDGLAVDVDL
Sbjct: 254 QVKHVQIDTGKTWREGAIRWFPRHGVRGLDGIVLTHDHADAMLGLDDVRSIQDSRK-RTPTPVHVSERTDRSVRRVFPYLVGREDDNGAGGRFVAALNFNVFQDFQPFEVGGLEITPFPVMHGEDYVSHGFLFGPEGNKICYISDVSRVPPESMEFLEKHGPMQLLVCDALMVSKKHRTHFCVEDSVVLAGQLKARRTLLVGLGSDIEYHATNAMLASREEEELGMPHVRLAYDGLAVDVDL 494
BLAST of mRNA_S-firma_F_contig10145.247.1 vs. uniprot
Match: A0A6H5JEM8_9PHAE (Lactamase_B domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEM8_9PHAE) HSP 1 Score: 325 bits (833), Expect = 6.040e-107 Identity = 151/181 (83.43%), Postives = 165/181 (91.16%), Query Frame = 1
Query: 7 RVRHVQIDTGKTWREGVIRWFPRHGVPGIDGIILTHDHADAMLGLDDVRSVQAPRKERASTPVFVSEQTDRSVRRVFPYLVGREDDNGRGGRYVAALKFNAFQDFEPFEVGGLEVTPFPVLHGEDYVSHGFLFGPERNKVCYISDVSRVPPESMEFLQRQGPMQLLVCDALTRSQKHPTHF 549
+V+HVQIDTGKTWREG IRWFPRHGV G+DGI+LTHDHADAMLGLDDVRS+Q RK R TPV VSE+TDRSVRRVFPYLVGREDDNG GGR+VAAL FN FQDF+PFEVGGLE+TPFPV+HGEDYVSHGFLFGPE NK+CYISDVSRVPPESMEFL++ GPMQLLVCDAL S+KH THF
Sbjct: 193 QVKHVQIDTGKTWREGAIRWFPRHGVRGLDGIVLTHDHADAMLGLDDVRSIQDSRK-RTPTPVHVSERTDRSVRRVFPYLVGREDDNGAGGRFVAALNFNVFQDFQPFEVGGLEITPFPVMHGEDYVSHGFLFGPEGNKICYISDVSRVPPESMEFLEKHGPMQLLVCDALMVSKKHRTHF 372
BLAST of mRNA_S-firma_F_contig10145.247.1 vs. uniprot
Match: A0A835ZCK6_9STRA (Beta-lactamase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCK6_9STRA) HSP 1 Score: 216 bits (549), Expect = 1.770e-64 Identity = 121/252 (48.02%), Postives = 151/252 (59.92%), Query Frame = 1
Query: 25 IDTGKTWREGVIRWFPRHGVPGIDGIILTHDHADAMLGLDDVRSVQAPRKERASTPVFVSEQTDRSVRRVFPYLVGREDDNGRGG-RYVAALKFNAFQDFEPFEVGGLEVTPFPVLHGEDYVSHGFLFGPERNKVCYISDVSRVPPESMEFLQRQGPMQLLVCDALTRSQKHPTHFSVEDSVVLAGQLKARRTLLVGLGSDIEYHATNALLASREEASPDMPHVRLAYDGLAVDVDL*EGTSFQHTDLECGV 777
IDTGKT+REGV+RW+PRH V +DGI+L+HDHADA+LGLDDVR +Q TPV V +T S++RVFPYL G NG+ G R+VAAL F F EPF V GL + P PV+HGEDY+S+GF+FGP + YISD SRVPP++M L+R+ + LLV DAL + + HPTHFS+ SV LA L+A + S HA AL +P P L GT H DL V
Sbjct: 23 IDTGKTFREGVLRWYPRHDVTSLDGIVLSHDHADAILGLDDVRGLQ--NSADPPTPVLVDSRTMHSLQRVFPYLCGT---NGKAGIRHVAALDFRTFTPHEPFTVAGLTMLPIPVVHGEDYMSNGFIFGPAHARTVYISDCSRVPPDTMAVLRRER-IALLVVDALLKDRAHPTHFSMAQSVELARDLRAACARIFTAASRALPHALRALTCLPAHPAPRQPLRTLMV-----------GTGSDHHDLHAPV 257
BLAST of mRNA_S-firma_F_contig10145.247.1 vs. uniprot
Match: A0A1J7G538_LUPAN (Lactamase_B domain-containing protein n=1 Tax=Lupinus angustifolius TaxID=3871 RepID=A0A1J7G538_LUPAN) HSP 1 Score: 202 bits (513), Expect = 2.330e-59 Identity = 108/247 (43.72%), Postives = 161/247 (65.18%), Query Frame = 1
Query: 16 HVQIDTGKTWREGVIRWFPRHGVPGIDGIILTHDHADAMLGLDDVRSVQ--APRKERASTPVFVSEQTDRSVRRVFPYLVGREDDNGRGGRYVAALKFNAFQDF--EPFEVGGLEVTPFPVLHGEDYVSHGFLFGPERNKVCYISDVSRVPPESMEFLQRQGPMQL--LVCDALTRSQKHPTHFSVEDSVVLAGQLKARRTLLVGLGSDIEYHATNALLA--SREEASPDMPHVRLAYDGLAVDVDL 732
++ ID GK+++E V+RWF H +P ID IILTH+HADA+LGLDDVRSVQ +P + STP+++S+ + S+++ FPYLV ++ G+ R+VA + +N D +PF GL+ TP PV+HGEDY+ GFLFG E+++V YISDVSR+P + + + G QL L+ D+L R+ H H + ++ +L +RTLL+G+ + ++H N LL SR E P V+LA+DGL V ++L
Sbjct: 85 YILIDAGKSFKEAVLRWFVPHQIPRIDSIILTHEHADAVLGLDDVRSVQHFSPTNDINSTPIYLSQHSMNSIKQKFPYLVEKKRKEGQEIRWVAQMAWNIIADNFNQPFFASGLKFTPLPVMHGEDYICLGFLFG-EKSRVAYISDVSRIPVSTEYVISKSGAGQLDLLILDSLCRTGSHNFHLCLPQALETVKRLCPKRTLLIGMTHEFDHHRDNELLTEWSRREGIP----VQLAHDGLRVPINL 326
BLAST of mRNA_S-firma_F_contig10145.247.1 vs. uniprot
Match: B9SZL3_RICCO (Lactamase_B domain-containing protein n=3 Tax=Ricinus communis TaxID=3988 RepID=B9SZL3_RICCO) HSP 1 Score: 198 bits (503), Expect = 7.300e-58 Identity = 110/252 (43.65%), Postives = 160/252 (63.49%), Query Frame = 1
Query: 1 EVRVRHVQIDTGKTWREGVIRWFPRHGVPGIDGIILTHDHADAMLGLDDVRSVQ--APRKERASTPVFVSEQTDRSVRRVFPYLVGREDDNGRGGRYVAALKFNAFQDF--EPFEVGGLEVTPFPVLHGEDYVSHGFLFGPERNKVCYISDVSRVPPESMEFLQRQGPMQ--LLVCDALTRSQKHPTHFSVEDSVVLAGQLKARRTLLVGLGSDIEYHATNALLA--SREEASPDMPHVRLAYDGLAVDVDL 732
E + +++ ID GKT+RE V+RWF H +P +D IILTH+HADA+LGLDD+R+VQ +P E PV++S+ T S+ FPYL+ +E G+ R+VA L++ ++ PF G++ P PV+HGEDYVS GFLFG E+++V YISDVSR P + + + G Q LL+ D L RS H HF + S+ +L ++ LL+G+G +I+++ N LA S+ E P V+LA+DGL V +DL
Sbjct: 81 EEKHKYILIDVGKTFREQVLRWFTFHKIPRVDSIILTHEHADAVLGLDDIRTVQPFSPTNEVDPVPVYLSQPTMNSITLKFPYLIKKEL-RGQEIRHVAQLEWKIIEEDCQRPFVASGVQFVPLPVIHGEDYVSLGFLFG-EKSRVAYISDVSRFPASTEYVISKAGAGQVDLLILDTLRRSGSHNVHFCLPQSLEAVKRLCPKQALLIGMGHEIDHYKDNVFLAEWSKREGIP----VQLAFDGLRVTIDL 326
BLAST of mRNA_S-firma_F_contig10145.247.1 vs. uniprot
Match: A0A1S2XA09_CICAR (putative hydrolase C777.06c n=2 Tax=NPAAA clade TaxID=2231382 RepID=A0A1S2XA09_CICAR) HSP 1 Score: 196 bits (497), Expect = 4.870e-57 Identity = 105/247 (42.51%), Postives = 157/247 (63.56%), Query Frame = 1
Query: 16 HVQIDTGKTWREGVIRWFPRHGVPGIDGIILTHDHADAMLGLDDVRSVQ--APRKERASTPVFVSEQTDRSVRRVFPYLVGREDDNGRGGRYVAALKFNAFQDF--EPFEVGGLEVTPFPVLHGEDYVSHGFLFGPERNKVCYISDVSRVPPESMEFLQRQGPMQL--LVCDALTRSQKHPTHFSVEDSVVLAGQLKARRTLLVGLGSDIEYHATNALLA--SREEASPDMPHVRLAYDGLAVDVDL 732
++ ID GKT+RE V+RWF H +P ID IILTH+HADA+LGLDD+R+VQ +P + TP+++S+ + S+ FPYLV ++ G+ R VA + +N +D +PF GL+ TP PV+HGEDY+ GFLFG E+++V YISDVSR+P + + + G QL L+ D+L R+ H H ++ +L ++TLL+G+ + ++H N LA SR E P V+L++DGL V ++L
Sbjct: 79 YILIDVGKTFRETVLRWFVSHRIPRIDSIILTHEHADAVLGLDDIRAVQPFSPTNDIDPTPIYLSQHSMDSIEEKFPYLVQKKRKEGQEIRRVAQIAWNIIRDDCNQPFFASGLKFTPLPVMHGEDYICLGFLFG-EKSRVAYISDVSRIPASTEYVISKSGAGQLDLLILDSLYRTGSHNVHLCFPQTLETVKRLCPKKTLLIGMTHEFDHHKDNEFLAEWSRREGIP----VQLSHDGLRVPINL 320
BLAST of mRNA_S-firma_F_contig10145.247.1 vs. uniprot
Match: V4MQ82_EUTSA (Lactamase_B domain-containing protein n=14 Tax=Brassicaceae TaxID=3700 RepID=V4MQ82_EUTSA) HSP 1 Score: 196 bits (497), Expect = 5.440e-57 Identity = 107/248 (43.15%), Postives = 153/248 (61.69%), Query Frame = 1
Query: 13 RHVQIDTGKTWREGVIRWFPRHGVPGIDGIILTHDHADAMLGLDDVRSVQ--APRKERASTPVFVSEQTDRSVRRVFPYLVGREDDNGRGGRYVAALKFNAFQDF--EPFEVGGLEVTPFPVLHGEDYVSHGFLFGPERNKVCYISDVSRVPPESMEFLQRQG--PMQLLVCDALTRSQKHPTHFSVEDSVVLAGQLKARRTLLVGLGSDIEYHATNALLA--SREEASPDMPHVRLAYDGLAVDVDL 732
+++QID GKT+RE V+RWF H +P +D IILTH+HADA+LGLDD+RSVQ +P + TP+FVS+ S+ FPYLV ++ G+ R VA L + ++ +PF L TP PV+HGEDYV GFLFG E+++V YISDVSR PP + + + G + LL+ D L ++ H TH ++ +L +R LL+G+ + ++H N L S+ E P V+LA+DGL V +DL
Sbjct: 82 KYIQIDVGKTFREQVLRWFTLHKIPRVDSIILTHEHADAVLGLDDIRSVQPFSPTNDIDPTPIFVSQYAMDSLAVKFPYLVQKKLKEGQEVRRVAQLDWRVIEEDCEKPFVASDLSFTPLPVMHGEDYVCLGFLFG-EKSRVAYISDVSRFPPNTEYVISKSGGGQLDLLILDTLYKTGSHNTHLCFPQTLDTIKRLSPKRALLIGMTHEFDHHKDNEFLEEWSKREGIP----VKLAHDGLRVPIDL 324
BLAST of mRNA_S-firma_F_contig10145.247.1 vs. uniprot
Match: G7IP30_MEDTR (Metallo-hydrolase/oxidoreductase superfamily protein n=4 Tax=Trifolieae TaxID=163742 RepID=G7IP30_MEDTR) HSP 1 Score: 195 bits (495), Expect = 9.680e-57 Identity = 105/247 (42.51%), Postives = 156/247 (63.16%), Query Frame = 1
Query: 16 HVQIDTGKTWREGVIRWFPRHGVPGIDGIILTHDHADAMLGLDDVRSVQ--APRKERASTPVFVSEQTDRSVRRVFPYLVGREDDNGRGGRYVAALKFNAFQDF--EPFEVGGLEVTPFPVLHGEDYVSHGFLFGPERNKVCYISDVSRVPPESMEFLQRQGPMQL--LVCDALTRSQKHPTHFSVEDSVVLAGQLKARRTLLVGLGSDIEYHATNALLA--SREEASPDMPHVRLAYDGLAVDVDL 732
++ ID GKT+RE V+RWF H +P ID IILTH+HADA+LGLDDVR+VQ +P + TP+++S+ + S+ FPYLV ++ G+ R VA + +N D +PF GL+ TP PV+HGEDY+ GFLFG E+++V YISDVSR+P + + + G QL L+ D+L R+ H H ++ + +L ++TLL+G+ + ++H N L SR E P V+L++DGL V ++L
Sbjct: 79 YILIDVGKTFRETVLRWFVHHRIPKIDSIILTHEHADAVLGLDDVRAVQPFSPTNDIDPTPIYLSQHSMDSIEEKFPYLVQKQRKEGQEIRRVAQMAWNIITDDCNQPFFASGLKFTPLPVMHGEDYICLGFLFG-EKSRVAYISDVSRIPASTEYVISKSGAGQLDLLILDSLYRTGSHNVHLCFPQTLEIVKRLCPKQTLLIGMTHEFDHHKDNEFLKEWSRREGIP----VQLSHDGLRVPINL 320
BLAST of mRNA_S-firma_F_contig10145.247.1 vs. uniprot
Match: A0A176VB99_MARPO (Lactamase_B domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176VB99_MARPO) HSP 1 Score: 197 bits (502), Expect = 1.110e-56 Identity = 110/247 (44.53%), Postives = 154/247 (62.35%), Query Frame = 1
Query: 13 RHVQIDTGKTWREGVIRWFPRHGVPGIDGIILTHDHADAMLGLDDVRSVQA--PRKERASTPVFVSEQTDRSVRRVFPYLVGREDDNGRGGRYVAALKFNAFQDF--EPFEVGGLEVTPFPVLHGEDYVSHGFLFGPERNKVCYISDVSRVPPESMEFLQRQG---PMQLLVCDALTRSQKHPTHFSVEDSVVLAGQLKARRTLLVGLGSDIEYHATNALLASREEASPDMPHVRLAYDGLAVDVDL 732
R++QID GK ++E V+RWF H VP +D ++LTH+HADAMLGLDD+R VQ + A+ PVFVS+ T SV FPYLV + G+ R VA L + F+ GLE+TP PV+HGEDY+S GFLFG ++++V YISDVSR+P + + + G P+ +L+ D+L +S H THF EDS+ +L+ RR VG+ + E+ NA LA E + + V+LAYDG+ + V L
Sbjct: 173 RYIQIDAGKNFKEQVLRWFLIHKVPRLDALLLTHEHADAMLGLDDIRGVQNYNSMNDIAAMPVFVSQHTMDSVNAKFPYLVEKTLKEGQEVRRVAQLDWRVIDTSCSALFDAVGLEITPLPVMHGEDYLSLGFLFG-KKHRVAYISDVSRIPETTEQVISAAGDLGPVDILILDSLYKSGPHNTHFCYEDSLAAVKRLRPRRAFFVGMTHEFEHERDNAELA--EWSQREGIEVQLAYDGMRIPVCL 416
BLAST of mRNA_S-firma_F_contig10145.247.1 vs. uniprot
Match: K7M157_SOYBN (Lactamase_B domain-containing protein n=10 Tax=Phaseoleae TaxID=163735 RepID=K7M157_SOYBN) HSP 1 Score: 194 bits (493), Expect = 1.980e-56 Identity = 107/248 (43.15%), Postives = 153/248 (61.69%), Query Frame = 1
Query: 13 RHVQIDTGKTWREGVIRWFPRHGVPGIDGIILTHDHADAMLGLDDVRSVQA--PRKERASTPVFVSEQTDRSVRRVFPYLVGREDDNGRGGRYVAALKFNAFQDF--EPFEVGGLEVTPFPVLHGEDYVSHGFLFGPERNKVCYISDVSRVPPESMEFLQRQGPMQL--LVCDALTRSQKHPTHFSVEDSVVLAGQLKARRTLLVGLGSDIEYHATNALLA--SREEASPDMPHVRLAYDGLAVDVDL 732
+++ ID GKT+RE V+RWF H +P +D IILTH+HADA+LGLDDVR+VQA P + TP+++S+ + S+ FPYLV ++ G R VA + +N D +PF GL+ TP PV+HGEDY+ GFLFG E+N+V YISDVSR P + + + G QL L+ D+L RS H H ++ +L ++TLL+G+ + ++H N L S+ E P V LA+DGL V ++L
Sbjct: 79 KYILIDVGKTFRETVLRWFVAHRIPRVDSIILTHEHADAVLGLDDVRAVQAFSPTNDIDPTPIYLSQHSMDSIAEKFPYLVQKKRKEGAEIRRVAQIDWNIIADDCNKPFLASGLKFTPLPVMHGEDYICLGFLFG-EKNRVAYISDVSRFPASTEYVISKSGAGQLDLLILDSLYRSGSHNVHLCFPQTLETVKRLCPKQTLLIGMTHEFDHHKDNEFLMEWSKREGIP----VELAHDGLRVPINL 321 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10145.247.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10145.247.1 >prot_S-firma_F_contig10145.247.1 ID=prot_S-firma_F_contig10145.247.1|Name=mRNA_S-firma_F_contig10145.247.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=202bp MLGLDDVRSVQAPRKERASTPVFVSEQTDRSVRRVFPYLVGREDDNGRGGback to top mRNA from alignment at S-firma_F_contig10145:2..3691+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10145.247.1 ID=mRNA_S-firma_F_contig10145.247.1|Name=mRNA_S-firma_F_contig10145.247.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=3690bp|location=Sequence derived from alignment at S-firma_F_contig10145:2..3691+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10145:2..3691+ >mRNA_S-firma_F_contig10145.247.1 ID=mRNA_S-firma_F_contig10145.247.1|Name=mRNA_S-firma_F_contig10145.247.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1212bp|location=Sequence derived from alignment at S-firma_F_contig10145:2..3691+ (Sphaerotrichia firma ET2_F female)back to top |