mRNA_S-firma_F_contig10141.241.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10141.241.1 vs. uniprot
Match: A0A6H5JZE4_9PHAE (Sulfotransfer_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZE4_9PHAE) HSP 1 Score: 316 bits (810), Expect = 2.570e-95 Identity = 167/348 (47.99%), Postives = 226/348 (64.94%), Query Frame = 1
Query: 1228 RCWISE-DGRRKCYANVFFFGVSKCGTTTLASWMAHHPTLRWVSNSGHLGQK-GFEAHVMYHYTAIIKPDLLPTSTLRYAALAPEAEEGDRVIDYTPHYAIVPEVPYRIRRLYGNSSFDGCTKYLVSLREPAARAVSSWEYKFNMYALSKNADPTKVSGEARPLEVAIREGIEDVNGLLGCLEQYP-------RPPLPLELDYIKELDLHKCHTQAYWGDNNRLLRHHIGNGMYALHLERWFAVVGRENVKVLFLEEINDDPVKTLEGIFDFIGLNLLDSA-AKKGLANREEWERIVQTRDNITEDKRKRALGPQVTPELMQEMRDFFAPHNSRLEKLLGRPVPDSWS 2241
RC++ E + +C+ANV+FFGVSKCGTT+LA WMA HP L+WVSN+ H K G EAHVM T + S YA AP + D+VIDYTPHY+I+ EVPYRI+ +YG +S+DG KY+ LREP AR +SSWE+K+++ + K + S E R LE A EG E L+ CL R P L+L+ +DL C+ A+ N + H+G +Y+L LERW + GRENVKV+FLEE+ DP+ T+ +FDF+G++LLD KGL +R EWE IV+T+ N+T ++K+ L QVTPE++Q MRDFFAP N++LE+LLGRP+PD+WS
Sbjct: 110 RCFVLEGEDSSRCHANVYFFGVSKCGTTSLAHWMARHPALQWVSNTCHTQHKQGGEAHVMEMST-------IKNSESTYALTAPMTAQTDKVIDYTPHYSILAEVPYRIKDMYGKTSYDGTVKYIAVLREPVARTISSWEFKYDLRGIEKG-EAVNPSSERRSLEEAFSEGREHALSLVKCLSDKENDLRNEIRYPGALKLN----IDLQMCNPHAFLEHN--MFFSHVGKSIYSLQLERWLDLFGRENVKVVFLEEMAVDPMGTIASVFDFLGVDLLDEKEGVKGLRSRTEWEEIVRTKHNLTNQRKKKILDEQVTPEILQSMRDFFAPFNTQLEELLGRPLPDNWS 443
BLAST of mRNA_S-firma_F_contig10141.241.1 vs. uniprot
Match: D7G7A7_ECTSI (Sulfotransfer_1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7A7_ECTSI) HSP 1 Score: 274 bits (701), Expect = 2.670e-81 Identity = 151/318 (47.48%), Postives = 199/318 (62.58%), Query Frame = 1
Query: 1324 MAHHPTLRWVSNSGHLGQKGFEAHVMYHYTAIIKPDLLPTS-TLRYAALAPEAEEGDRVIDY---TPHYAIVPEVPYRIRRLYGNSSFDGCTKYLVSLREPAARAVSSWEYKFNMYALSKNADPTKVSGEARPLEVAIREGIEDVNGLLGCLEQYPRPPLPL-ELDYIKELDLHKCHTQAYWGDNNRLLRHHIGNGMYALHLERWFAVVGRENVKVLFLEEINDDPVKTLEGIFDFIGLNLLDSAAKKGLANREEWERIVQTRDNITEDKRKRALGPQVTPELMQEMRDFFAPHNSRLEKLLGRPVPDSWSTPAAS*H 2262
MAHHP L+WVSN +G+ EAHV+ +L T +Y AP AEE D+VID TPH +I EVPYRI +YG+++ DG KYL+ LR+P ARA+SSW KF++ +L + +G+ R L AI++G + L C + R P + + K ++L +C + + G + L H+ GMYA LERWFA+VGREN+KV FLEE DPV L IF+FIGL+LLD +KGL NRE WE +V T N T++KRK L QVTPEL+Q MRDFFA HN+ LE+LLGRP+PD+WST A+ H
Sbjct: 1 MAHHPALQWVSNLHMIGRVAEEAHVLDELGKEDFQQMLGQGPTGKYGQTAPFAEESDKVIDCAADTPHCSIKAEVPYRILDIYGDAARDGSNKYLIQLRDPVARAISSWTSKFDLLSLEEGFVEGDSAGDTRSLAEAIQQGEHGMAALNDCEGKERRLAAPSWDPERQKVMELERCPMRNFLGHSQGLYWAHVAKGMYARQLERWFALVGRENIKVTFLEETAADPVGALASIFEFIGLDLLDEEGEKGLPNREAWESVVATVHNETDEKRKTILDQQVTPELLQSMRDFFASHNAELEELLGRPLPDNWSTVASGSH 318
BLAST of mRNA_S-firma_F_contig10141.241.1 vs. uniprot
Match: D7G7B1_ECTSI (Sulfotransferase, C-terminal Sulfotransferase, N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7B1_ECTSI) HSP 1 Score: 235 bits (599), Expect = 2.570e-66 Identity = 131/279 (46.95%), Postives = 171/279 (61.29%), Query Frame = 1
Query: 1228 RCWISE-DGRRKCYANVFFFGVSKCGTTTLASWMAHHPTLRWVSNSGHLGQK-GFEAHVMYHYTAIIKPDLLPTSTLRYAALAPEAEEGDRVIDYTPHYAIVPEVPYRIRRLYGNSSFDGCTKYLVSLREPAARAVSSWEYKFNMYALSKNADPTKVSGEARPLEVAIREGIEDVNGLLGCLEQYP-------RPPLPLELDYIKELDLHKCHTQAYWGDNNRLLRHHIGNGMYALHLERWFAVVGRENVKVLFLEEINDDPVKTLEGIFDFIGLNLLD 2037
RC++ E + +C+ANV+FFGVSKCGTT+LA WMA HP L WVSN H K G EAHVM T + + YA AP A + D VIDYTPHY+I+ EVPYRIR +YG +S+DG KY+ LREP AR +SSW++K+++ + K + S E R LE A EG E L+ CL R P L+L YI DL C+ A+ N + H+G +Y+L LERW + GRENVKVLFLEE+ DP+ T+ +FDF+G++LLD
Sbjct: 70 RCFVLEGEDSSRCHANVYFFGVSKCGTTSLAHWMARHPALSWVSNVWHTRHKQGGEAHVMEMST-------IKDNESTYALTAPMAAQTDTVIDYTPHYSILAEVPYRIRDMYGKTSYDGTVKYIAVLREPVARTISSWQFKYDLEGIEKG-EAANPSSERRSLEEAFSEGREHALSLVKCLSDKENDQRNQIRHPGALKL-YI---DLQMCNPHAFLEHN--MYFSHVGKSIYSLQLERWLDLFGRENVKVLFLEEMAVDPMGTITSVFDFLGVDLLD 334
BLAST of mRNA_S-firma_F_contig10141.241.1 vs. uniprot
Match: D8LLL8_ECTSI (Sulfotransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLL8_ECTSI) HSP 1 Score: 226 bits (577), Expect = 1.300e-61 Identity = 138/361 (38.23%), Postives = 195/361 (54.02%), Query Frame = 1
Query: 1186 LARDGEDPEEGVGR-RCWISEDGRRKCYANVFFFGVSKCGTTTLASWMAHHPTLRWVSNSGH---LGQKGF-EAHVMYHYTAIIKPDLLPTSTLRYAAL---APEAEEGDRVIDYTPHYAIVPEVPYRIRRLYGNSSFDGCTKYLVSLREPAARAVSSWEYKFNMYALSKNADPTKVSGEARPLEVAIREGIEDVNGLLGCLEQYPRPPLPLELDYIKELDLHKCHTQAYWGDNNRLLRHHIGNGMYALHLERWFAVVGRENVKVLFLEEINDDPVKTLEGIFDFIGLNLLDSAAKKGLANREEWERIVQTRDNITEDKRKRALGPQVTPELMQEMRDFFAPHNSRLEKLLGRPVPDSWST 2244
+ +GE + GR RC++ +G +CY VFFFG SKCGTT+LA W+ HHP WV+N + + G EAHV + K D + + L P++ D VIDYTPHY V E P+RI +YG + K++V+LREPA RA+SSWE+K N Y K E+R L I +G L CL + ++ DL C+ + + L H+G MYAL LERWF + GREN KV+F +++ DPV LE + F+GL L KGL + + W++I N T+ K+K LG QVT E+ + +R FF PHN LE++LG+P+P++W +
Sbjct: 143 VVAEGEGGKLRDGRNRCFVGAEGDHRCYPTVFFFGTSKCGTTSLARWLDHHPATHWVANPRRPHQIEETGVKEAHV---FDDPPKGDPAFEEGMHHEKLFITTPKSGAEDVVIDYTPHYIAVAETPHRIADIYGGR--ESGLKFIVTLREPAGRAISSWEFK-NEYNPKKGRRE-----ESRSLAKTIEDGGRRAMKLHACLALAKSKAVS-----PRDRDLKLCNPRKFL--EVPLYVSHVGKSMYALQLERWFDLFGRENFKVVFTDDMAVDPVGVLEDVLHFLGLELTSEDESKGLPDMKGWKKITGMAYNKTKSKKKDELGDQVTDEVKEGLRKFFEPHNEALEEILGQPLPEAWGS 485
BLAST of mRNA_S-firma_F_contig10141.241.1 vs. uniprot
Match: D7FHD4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHD4_ECTSI) HSP 1 Score: 221 bits (563), Expect = 2.880e-58 Identity = 144/406 (35.47%), Postives = 191/406 (47.04%), Query Frame = 1
Query: 1228 RCWISEDGRRKCYANVFFFGVSKCGTTTLASWMAHHPTLRWVSNSGHLGQKGFEAHVMYHYTAIIKPDLLP------TSTLRYAALAPEAEEGDRVIDYTPHYAIVPEVPYRIRRLY---GNSSFDGCTKYLVSLREPAARAVSSWEYKFNMYALSKNAD---------------PTKVSG--------------------EARPLEVAIREGIEDVNGLLGCLEQYP-------------------------RPPLPLELDYIKELDLHKCHTQAYWGDNNRLLRHHIGNGMYALHLERWFAVVGRENVKVLFLEEINDDPVKTLEGIFDFIGLNLLDSAAKKGLANREEWERIVQTRDNITEDKRKRALGPQVTPELMQEMRDFFAPHNSRLEKLLGRPVPDSW 2238
RCW E G +C VFFFGVSKCGTT+L++W++ HP +V + EAHV D P + + +L+P A D VID+TP+YAIV E P RI Y G ++LV LREP AR +SSWEYK N P ++ G E RPL VA REG V L C+ RPP L + + C+ + Y G+ L H+G +YA+ L RWF GREN KV+F +++ ++P+KTLE + DFIGL+++D KGL + E W IV R N + +K+ L QVTPE+ +EMR FFAP+N LE LLG P+P SW
Sbjct: 246 RCWTDEAGNGRCLPTVFFFGVSKCGTTSLSNWLSSHPRAVFVPPPEAHDYR--EAHVF---------DNTPKYWHGVSDRGKRESLSPMASWRDTVIDFTPNYAIVGEAPLRIYDYYHQAGGGRLRSNLRFLVVLREPVARTISSWEYKSEPLGPHGNGTGNSSYSSGGGAISEWPQRIGGVDIGASEDMRDRRRLDFVMEEQRPLSVAFREGAATVERLAACVRNATDSGLFGREPTVTYCRATKGRKQCNGRPPCELCNTHTEPW----CNPRVYLGEV--LYNAHVGKSVYAMQLRRWFNAFGRENFKVVFTDDLEEEPIKTLEEVLDFIGLDMVDPQGDKGLRSLEMWSDIVGARFNTADGAKKKVLDSQVTPEMREEMRAFFAPYNKDLEDLLGVPLPSSW 634
BLAST of mRNA_S-firma_F_contig10141.241.1 vs. uniprot
Match: A0A6H5L245_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L245_9PHAE) HSP 1 Score: 141 bits (355), Expect = 4.190e-34 Identity = 81/208 (38.94%), Postives = 107/208 (51.44%), Query Frame = 1
Query: 1690 VSGEARPLEVAIREGIEDVNGLLGCLEQYP-------------------------RPPLPLELDYIKELDLHKCHTQAYWGDNNRLLRHHIGNGMYALHLERWFAVVGRENVKVLFLEEINDDPVKTLEGIFDFIGLNLLDSAAKKGLANREEWERIVQTRDNITEDKRKRALGPQVTPELMQEMRDFFAPHNSRLEKLLGRPVPDSW 2238
V E RPL VA REG V L C+ RPP L + + C+ + Y G+ L H+G +YA+ L RWF G EN KV+F E++ ++P+KTLE + DFIGL+++D KGL N E W IV R N + +K+ L QVTPE+ +EMR FFAP+N LE LLG P+P SW
Sbjct: 36 VMEEQRPLSVAFREGAATVERLAACVRNATDSGLFGREPTVTYCRVTKGRKQCNGRPPCELCNTHTEPW----CNPRVYLGEI--LYNAHVGKSVYAMQLRRWFNAFGSENFKVVFTEDLEEEPIKTLEEVLDFIGLDMVDPQGDKGLRNLEMWSEIVGARFNTADGAKKKVLDSQVTPEMREEMRAFFAPYNRDLEDLLGVPLPSSW 237
BLAST of mRNA_S-firma_F_contig10141.241.1 vs. uniprot
Match: A0A7S4KR35_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4KR35_GUITH) HSP 1 Score: 116 bits (291), Expect = 5.560e-24 Identity = 96/354 (27.12%), Postives = 153/354 (43.22%), Query Frame = 1
Query: 1255 RKCYANVFFFGVSKCGTTTLASWMAHHPTLRWVSNSGHL---------GQKG----FEAHVMYHYTAIIKPDLLPTSTLRYAALAPEAE--EGDRVIDYTPHYAIVPEVPYRIRRLYGNSSFDGCTKYLVSLREPAARAVSSWEYKFNMYALSKNADPTKVSGEARPLEVAIREGIE---------------DVNGLLGCLEQYPRPPLPLE--LDYIKELDLHKCHTQAYWGDNNRLLRHHIGNGMYALHLERWFAVVGRENVKVLFLEEINDDPVKTLEGIFDFIGLNLLDSAAKKGLANREEWERIVQTRDNITEDKRKRALGPQVTPELMQEMRDFFAPHNSRLEKLLGR 2220
RK + G SKCGT+++ ++ P + S G + +G E H+ +L+ + Y++ E + + YTPHY P PY + RL+G+ + ++LV LREP ARAVSS+ +K K E+R L AI GI+ D + + CLE P L E + +KE+ + K + L H+G G+Y L RW + +E V LEE + DPV L + IG++ D + + E+ VQ + N+T+ A E++++++ F+APHN +L +LLGR
Sbjct: 100 RKFRPDFMLLGSSKCGTSSVIRYLLAVPEVSLASRVGMIETQEEIQDVSDEGNFDPLETHIFDQKVEFSPVELMRAQCIAYSSRLQEGQGASASMLAHYTPHYIYHPMTPYNLERLFGS---EHNIRFLVMLREPVARAVSSYYFK------------VKTERESRTLAEAISAGIQYHTNMRHKIVSECGLDHDAEVVCLED-AEPALGREEMVQKLKEIYIDKTLPDCPPLHDPNLFNDHVGKGVYHEQLRRWMHIFPKERFYVCTLEEFSQDPVGKLSEMLSHIGMSEEDIRKSRSVL-----EQTVQKKWNVTQSSSSSA-----DQEVLEQLKAFYAPHNEKLFQLLGR 427
BLAST of mRNA_S-firma_F_contig10141.241.1 vs. uniprot
Match: A0A835YNP6_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNP6_9STRA) HSP 1 Score: 108 bits (269), Expect = 4.670e-22 Identity = 90/281 (32.03%), Postives = 128/281 (45.55%), Query Frame = 1
Query: 1249 GRRKCYANVFFFGVSKCGTTTLASWMAHHPTLRWVSNSGHLGQKGFEAHVMYHYTAIIKPDLLPTSTLRYAALAPEAEE-GDRVIDYTPHYAIVPEVPYRIRRLYGNSSFDGCTKYLVSLREPAARAVSSWEYKFNMYALSKNAD-------------PTKVSGEARPLEV-AIREGIEDVNGLLGCLEQYPRPPLPLELDYIKE-LDLHKCHT------QAYW---GDNNRLLRHHIGN------------GMYALHLERWFAVVGRENVKVLFLEEIND 1980
G+ +C NV FFGVSK GTT+LA W++ HP ++++ G + E+ A +K L R LAP A+ D V+DYTPHYA+VPEVPYRI L SS TK++V LREPA RA+SSW +K Y L ++ + PT A L ++ G+ L C+E + + +DL C+ QA + D + LR H+G Y L LE W +V+ + + E+ D
Sbjct: 2 GQTRCLPNVVFFGVSKAGTTSLAHWLSQHPQVKFM------GGRPSESR------AYLKGRTLADIRERSKRLAPSADPVSDVVVDYTPHYAMVPEVPYRICHLLDCSS----TKFIVLLREPAERAISSWRFK-ERYKLKRDPEAYISALNAMRAGQPTASHHHAPELLTKSMERGMAKAAEWLACVEVEVAAAAAAGRNVTADAIDLQLCNAVRLFEGQAAYEVPSDGSLSLRDHVGKPERSGPDSAKWQANYHLSLEYWDSVLSKRYNPTRRIPELED 265
BLAST of mRNA_S-firma_F_contig10141.241.1 vs. uniprot
Match: L1J6M3_GUITC (Sulfotransfer_1 domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J6M3_GUITC) HSP 1 Score: 105 bits (261), Expect = 5.240e-21 Identity = 89/322 (27.64%), Postives = 138/322 (42.86%), Query Frame = 1
Query: 1255 RKCYANVFFFGVSKCGTTTLASWMAHHPTLRWVSNSGHLGQKGFEAHVMYHYTAIIKPDLLPTSTLRYAALAPEAEEGDRVIDYTPHYAIVPEVPYRIRRLYGNSSFDGCTKYLVSLREPAARAVSSWEYKFNMYALSKNADPTKVSGEARPLEVAIREGIEDVNGLLGCLEQYPRPPLPLELDYIKELDLHKCHTQAYWGDNNRLLRHHIGNGMYALHLERWFAVVGRENVKVLFLEEINDDPVKTLEGIFDFIGLNLLDSAAKKGLANREEWERIVQTRDNITEDKRKRALGPQVTPELMQEMRDFFAPHNSRLEKLLGR 2220
RK + G SKCGT+++ ++ P + S G M I+ + +S L+ + + YTPHY P PY + RL+G+ + ++LV LREP ARAVSS+ +K K E+R L AI GI+ + + Y LP D H + D H+G G+Y L RW + +E V LEE + DPV L + IG++ D + + E+ VQ + N+T+ A E++++++ F+APHN +L +LLGR
Sbjct: 33 RKFRPDFMLLGSSKCGTSSVIRYLLAVPEVSLASRVG-----------MIETQEEIQDCIAYSSRLQEG----QGASASMLAHYTPHYIYHPMTPYNLERLFGS---EHNIRFLVMLREPVARAVSSYYFK------------VKTERESRTLAEAISAGIQYHTNMRHKII-YIDKTLP---------DCPPLHDPNLFND-------HVGKGVYHEQLRRWMHIFPKERFYVCTLEEFSQDPVGKLSEMLSHIGMSEEDIRKSRSVL-----EQTVQKKWNVTQSSSSSA-----DQEVLEQLKAFYAPHNEKLFQLLGR 297
BLAST of mRNA_S-firma_F_contig10141.241.1 vs. uniprot
Match: A0A6H5L1A9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1A9_9PHAE) HSP 1 Score: 104 bits (259), Expect = 5.880e-20 Identity = 68/179 (37.99%), Postives = 90/179 (50.28%), Query Frame = 1
Query: 1150 GIAQHQLAAQYQLARDGEDPEEGVGRRCWISEDGRRKCYANVFFFGVSKCGTTTLASWMAHHPTLRWVSNSGHLGQKGFEAHVMYHYTAIIKPDLLPTSTLRY----------AALAPEAEEGDRVIDYTPHYAIVPEVPYRIRRLY---GNSSFDGCTKYLVSLREPAARAVSSWEYK 1647
G + +L + +LA E +G R CW E G +C VFFFGVSKCGTT+L++W++ HP +V + EAHV +T RY +L+P A D VID+TP+YAIV E P RI Y G ++LV LREP AR +SSW+YK
Sbjct: 221 GXGEGELLSSEELAD--ETLADGKAR-CWTDEAGNGRCLPTVFFFGVSKCGTTSLSNWLSSHPRAVFVPPPEAHDYR--EAHVF-------------DNTPRYWHGVSDRGKRESLSPVASSRDTVIDFTPNYAIVGEAPLRIYDYYHQAGGGRLRSNLRFLVVLREPVARTISSWQYK 381 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10141.241.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10141.241.1 >prot_S-firma_F_contig10141.241.1 ID=prot_S-firma_F_contig10141.241.1|Name=mRNA_S-firma_F_contig10141.241.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=465bp MTDSCGPTAATRPAAAPAAKTKPAVGSFQTCLPRLTTHLLVRALLLLQLCback to top mRNA from alignment at S-firma_F_contig10141:108..5039+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10141.241.1 ID=mRNA_S-firma_F_contig10141.241.1|Name=mRNA_S-firma_F_contig10141.241.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=4932bp|location=Sequence derived from alignment at S-firma_F_contig10141:108..5039+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10141:108..5039+ >mRNA_S-firma_F_contig10141.241.1 ID=mRNA_S-firma_F_contig10141.241.1|Name=mRNA_S-firma_F_contig10141.241.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=2790bp|location=Sequence derived from alignment at S-firma_F_contig10141:108..5039+ (Sphaerotrichia firma ET2_F female)back to top |