mRNA_S-firma_F_contig1014.237.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig1014.237.1 vs. uniprot
Match: A0A6H5KLK6_9PHAE (ADP-ribosylation factor-like protein 2-binding protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLK6_9PHAE) HSP 1 Score: 188 bits (477), Expect = 1.290e-56 Identity = 126/192 (65.62%), Postives = 137/192 (71.35%), Query Frame = 1
Query: 64 MGDMSLDWEFSSAGGASMDEE---DEVLASNEGXXXXXXXXXXXXXXXEAVMDPTFANLQQSFIDEWCEEFEDVEENKLIYTDLFRQYTQLVEQHLDGWLRQRIRGFEMEAFMKMVAERQDEVVGDVIDILMAVGDFTEFKGMMVAHRKGRGNGLVVTTAPVAVGATGAAEETMGGRQEQAKRGDARGPSMG 630
MG++ L+ E S GG MDEE +E ASNEG XXXXXXXXXXXXXX +D+WC EFEDVEENKLIYTDLFRQYT+LVE+HLDGWLRQRIRGFEME FMKMVAERQ EVVGDVIDILMAVGDF EFKGMMVAHRKGR NGLVVT+A + EE G +RG PS G
Sbjct: 1 MGELDLNQECSIIGG-EMDEEGEEEETFASNEGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDKWCGEFEDVEENKLIYTDLFRQYTRLVERHLDGWLRQRIRGFEMETFMKMVAERQGEVVGDVIDILMAVGDFAEFKGMMVAHRKGRDNGLVVTSA------SAGEEEAKTGWHRHVERGGVGDPSAG 185
BLAST of mRNA_S-firma_F_contig1014.237.1 vs. uniprot
Match: D7FPD1_ECTSI (ADP-ribosylation factor-like protein 2-binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPD1_ECTSI) HSP 1 Score: 186 bits (473), Expect = 6.440e-56 Identity = 126/200 (63.00%), Postives = 139/200 (69.50%), Query Frame = 1
Query: 64 MGDMSLDWEFSSAGGA--SMDEEDEVLASNEGXXXXXXXXXXXXXXXEAVMDPTFANLQQSFIDEWC---------EEFEDVEENKLIYTDLFRQYTQLVEQHLDGWLRQRIRGFEMEAFMKMVAERQDEVVGDVIDILMAVGDFTEFKGMMVAHRKGRGNGLVVTTAPVAVGATGAAEETMGGRQEQAKRGDARGPSMG 630
MG++ L+ E+S GG + EE+E ASNEG XXXXXXXXXXXXXX QQ F+DEWC EFEDVEEN+LIYTDLFRQYT+LVE+HLDGWLRQRIRGFEME FMKMVAERQ EVV DV DILMAVGDF EFKGMMVAHRKGR NGLVVT++ V EE G + A RG PS G
Sbjct: 1 MGELDLNQEYSIIGGEMDEIGEEEETFASNEGSXXXXXXXXXXXXXXXXXXXXXXXXXQQVFVDEWCGAYIPQQLLREFEDVEENRLIYTDLFRQYTRLVERHLDGWLRQRIRGFEMETFMKMVAERQGEVVDDVSDILMAVGDFAEFKGMMVAHRKGRDNGLVVTSSSVGE------EEAKTGWHQHAGRGGVVDPSAG 194
BLAST of mRNA_S-firma_F_contig1014.237.1 vs. uniprot
Match: A0A7S0DTY7_9EUKA (ADP-ribosylation factor-like protein 2-binding protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DTY7_9EUKA) HSP 1 Score: 105 bits (263), Expect = 2.690e-25 Identity = 47/104 (45.19%), Postives = 75/104 (72.12%), Query Frame = 1
Query: 199 EAVMDPTFANLQQSFIDEWCEEFEDVEENKLIYTDLFRQYTQLVEQHLDGWLRQRIRGFEMEAFMKMVAERQDEVVGDVIDILMAVGDFTEFKGMMVAHRKGRG 510
E +MD F LQ F+D+ CE+F+D +E KL YT++F+QY ++E ++ ++ R++G+ E FM M+ +R DE+ GDV D+LM++GDF EF+G+M+AH+ RG
Sbjct: 40 EILMDAKFNKLQSDFLDKNCEQFDDSKECKLTYTEIFKQYVSMIEGVVEKEVKARVQGYSSERFMAMLKDRPDEISGDVFDMLMSMGDFEEFRGLMLAHKAARG 143
BLAST of mRNA_S-firma_F_contig1014.237.1 vs. uniprot
Match: A0A6G0WGX0_9STRA (ADP-ribosylation factor-like protein 2-binding protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WGX0_9STRA) HSP 1 Score: 103 bits (256), Expect = 3.050e-24 Identity = 47/101 (46.53%), Postives = 70/101 (69.31%), Query Frame = 1
Query: 199 EAVMDPTFANLQQSFIDEWCEEFEDVEENKLIYTDLFRQYTQLVEQHLDGWLRQRIRGFEMEAFMKMVAERQDEVVGDVIDILMAVGDFTEFKGMMVAHRK 501
+ ++DP F LQ F + CE F+D ENKLIY DLF++YT L+E +L+ L+ +I GF ME +M+ E +D++ GDVIDILM+ DF EFK +M++ ++
Sbjct: 44 DILIDPEFIQLQSDFCQKHCEYFDDASENKLIYMDLFKEYTLLIENYLEARLQAQIDGFTMEELCQMIQEHEDDITGDVIDILMSCADFDEFKSLMLSFKQ 144
BLAST of mRNA_S-firma_F_contig1014.237.1 vs. uniprot
Match: A0A1V9ZD28_9STRA (ADP-ribosylation factor-like protein 2-binding protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZD28_9STRA) HSP 1 Score: 103 bits (257), Expect = 4.060e-24 Identity = 51/128 (39.84%), Postives = 79/128 (61.72%), Query Frame = 1
Query: 118 DEEDEVLASNEGXXXXXXXXXXXXXXXEAVM-DPTFANLQQSFIDEWCEEFEDVEENKLIYTDLFRQYTQLVEQHLDGWLRQRIRGFEMEAFMKMVAERQDEVVGDVIDILMAVGDFTEFKGMMVAHR 498
DEE+E ++++ G + V+ DP F +Q +F ++ CE F+D ENKLIY DLF +YT L+E L+ L++ I F M+A M+ E +DE+ GDVID+LM+ DF EFK +M++++
Sbjct: 26 DEEEETISADLGGSYEENKLDEAMGVIQDVLIDPDFVQMQNTFCEQHCEYFDDASENKLIYMDLFHEYTNLIENFLEARLKEAIDDFSMDALCAMIQEHEDEMTGDVIDVLMSCADFDEFKSLMLSYK 153
BLAST of mRNA_S-firma_F_contig1014.237.1 vs. uniprot
Match: A0A1Y1VKD3_9FUNG (ADP-ribosylation factor-like protein 2-binding protein n=1 Tax=Piromyces finnis TaxID=1754191 RepID=A0A1Y1VKD3_9FUNG) HSP 1 Score: 102 bits (253), Expect = 8.100e-24 Identity = 50/109 (45.87%), Postives = 76/109 (69.72%), Query Frame = 1
Query: 199 EAVMDPTFANLQQSFIDEWCEEFEDVEENKLIYTDLFRQYTQLVEQHLDGWLRQRIRGFEMEAFMKMVAERQDE-VVGDVIDILMAVGDFTEFKGMMVAHRKGR-GNGL 519
+ ++D F LQ+ F E CEEFED EENKLIYT++F YT+ +EQ+L+ L+++ F+M F+ M+ +R +E + GDV DIL ++GDF FK M++A++K R G G+
Sbjct: 38 DIILDDEFTTLQEKFFKENCEEFEDTEENKLIYTEIFNDYTEKIEQYLEKKLKEKFSWFDMTEFLMMLNQRDEEDMFGDVFDILTSLGDFNSFKEMIIAYKKERNGEGI 146
BLAST of mRNA_S-firma_F_contig1014.237.1 vs. uniprot
Match: A0A067C7S1_SAPPC (ADP-ribosylation factor-like protein 2-binding protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C7S1_SAPPC) HSP 1 Score: 102 bits (253), Expect = 8.310e-24 Identity = 51/128 (39.84%), Postives = 78/128 (60.94%), Query Frame = 1
Query: 118 DEEDEVLASNEGXXXXXXXXXXXXXXXEAVM-DPTFANLQQSFIDEWCEEFEDVEENKLIYTDLFRQYTQLVEQHLDGWLRQRIRGFEMEAFMKMVAERQDEVVGDVIDILMAVGDFTEFKGMMVAHR 498
DEE+E ++++ G + V+ DP+F +Q F + C+ F+D ENKLIY DLFR+YT L+E L+ L++ I F M+A M+ E +DE+ GDVID+LM+ DF EFK +M++ +
Sbjct: 15 DEEEETISADLGGSYEENKLDEAMGVIQDVLIDPSFVQMQNDFCETHCDCFDDASENKLIYMDLFREYTNLIENFLEARLKEAIDDFSMDALCSMIQEHEDEMTGDVIDVLMSCADFDEFKSLMLSFK 142
BLAST of mRNA_S-firma_F_contig1014.237.1 vs. uniprot
Match: A0A1W0A6R8_9STRA (ADP-ribosylation factor-like protein 2-binding protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A6R8_9STRA) HSP 1 Score: 101 bits (252), Expect = 1.080e-23 Identity = 46/100 (46.00%), Postives = 68/100 (68.00%), Query Frame = 1
Query: 199 EAVMDPTFANLQQSFIDEWCEEFEDVEENKLIYTDLFRQYTQLVEQHLDGWLRQRIRGFEMEAFMKMVAERQDEVVGDVIDILMAVGDFTEFKGMMVAHR 498
+ ++DP F LQ SF ++ CE F+D ENKLIY DLF++YT L+E +L+ L+ I F M+ M+ E +DE+ GDVID+LM+ DF EFK +M++ +
Sbjct: 40 DVLIDPEFVELQNSFCEQHCEYFDDESENKLIYMDLFKEYTNLIENYLETRLKSAIDDFSMDELCSMIQEHEDEMTGDVIDVLMSCADFDEFKSLMLSFK 139
BLAST of mRNA_S-firma_F_contig1014.237.1 vs. uniprot
Match: A0A6V2TH31_HETAK (ADP-ribosylation factor-like protein 2-binding protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2TH31_HETAK) HSP 1 Score: 102 bits (254), Expect = 1.380e-23 Identity = 49/106 (46.23%), Postives = 73/106 (68.87%), Query Frame = 1
Query: 199 EAVMDPTFANLQQSFIDEWCEEFEDVEENKLIYTDLFRQYTQLVEQHLDGWLRQRIRGFEMEAFMKMVAERQD--EVVGDVIDILMAVGDFTEFKGMMVAHRKGRG 510
E ++D F +LQ F + C+EFED +ENKL YTD+F YT+++E+ L G L + GF ME F+K + ER + EV GDV D+L+++ DF EFK +M++H++G G
Sbjct: 58 EILLDEEFTDLQTPFFKQHCDEFEDTDENKLEYTDIFNSYTEMIEEFLAGRLAAAVPGFSMERFLKQLEERNERGEVTGDVFDMLLSLTDFMEFKHIMLSHKEGGG 163
BLAST of mRNA_S-firma_F_contig1014.237.1 vs. uniprot
Match: A0A6P3VJT3_CLUHA (ADP-ribosylation factor-like protein 2-binding protein n=2 Tax=Clupea harengus TaxID=7950 RepID=A0A6P3VJT3_CLUHA) HSP 1 Score: 102 bits (253), Expect = 1.510e-23 Identity = 53/116 (45.69%), Postives = 78/116 (67.24%), Query Frame = 1
Query: 199 EAVMDPTFANLQQSFIDEWCEEFEDVEENKLIYTDLFRQYTQLVEQHLDGWLRQRIRGFEMEAFMKMVAERQDEVVGDVIDILMAVGDFTEFKGMMV---AHRKGRG----NGLVV 525
+ +MD F +LQQ+F+D++ +EF+D EENKLIYT +F +Y L+E+HL+ L +RI GF M AF + + +DEV GD+ D+L+ DF FK M + A ++GRG +GLVV
Sbjct: 47 DIIMDDDFQHLQQNFMDKYYQEFDDTEENKLIYTSIFNEYIDLLERHLEQQLLERIPGFNMSAFTHSLKQHKDEVSGDIFDMLLTFTDFMAFKEMFIDYRAEKEGRGLDLSDGLVV 162 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1014.237.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig1014.237.1 >prot_S-firma_F_contig1014.237.1 ID=prot_S-firma_F_contig1014.237.1|Name=mRNA_S-firma_F_contig1014.237.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=216bp MAYSRQRERRAPPSGGGIIESMGDMSLDWEFSSAGGASMDEEDEVLASNEback to top mRNA from alignment at S-firma_F_contig1014:3335..5850+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig1014.237.1 ID=mRNA_S-firma_F_contig1014.237.1|Name=mRNA_S-firma_F_contig1014.237.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=2516bp|location=Sequence derived from alignment at S-firma_F_contig1014:3335..5850+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig1014:3335..5850+ >mRNA_S-firma_F_contig1014.237.1 ID=mRNA_S-firma_F_contig1014.237.1|Name=mRNA_S-firma_F_contig1014.237.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1296bp|location=Sequence derived from alignment at S-firma_F_contig1014:3335..5850+ (Sphaerotrichia firma ET2_F female)back to top |