mRNA_S-firma_F_contig1011.203.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig1011.203.1
Unique NamemRNA_S-firma_F_contig1011.203.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
[Close]
BLAST of mRNA_S-firma_F_contig1011.203.1 vs. uniprot
Match: D7G0V2_ECTSI (Nudix hydrolase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0V2_ECTSI)

HSP 1 Score: 429 bits (1104), Expect = 9.020e-141
Identity = 209/229 (91.27%), Postives = 221/229 (96.51%), Query Frame = 3 
Query:  636 KKGPSNSTAFDATEHVSKTPNLTPVVRQEVMVDPPTSRELTYECISETPAYKGWRSILRRKIRGPQGKVRSYDVITQEHPSVLVFTWDTQTNTTTILKEYYPGMNRLMYGVVGGNYEADKHTSALQAAACELEEEAHLHEGTWHALMKDERTVAAAGKYSTQIFHSYLVVDPVVKGEPRALDDGEFIEYIRGVSLEEVRAMIYAGDMSVTSGFAALLAIEKLRELGHIM 1322
            +K P+N+TAFD TE  SKTPNLTPVVRQEVMVDPPTSREL YECISE+PAYKGWRSILRR+IRGPQGK+RSYDVITQEHPSVLVFTWDTQTNTTTILKEYYPGMNRLMYGVVGGNYEADKHTSALQAAACELEEEAHLHEGTW+ALMKDERTVA AGKYSTQ+F+SYLVVDPVVKG PR LDDGEFIEYIRGVSLEEVRAMI++GDMSVTSGFAAL+AIEKLRELGHIM
Sbjct:   39 RKSPTNATAFDVTEPASKTPNLTPVVRQEVMVDPPTSRELKYECISESPAYKGWRSILRRRIRGPQGKIRSYDVITQEHPSVLVFTWDTQTNTTTILKEYYPGMNRLMYGVVGGNYEADKHTSALQAAACELEEEAHLHEGTWYALMKDERTVAGAGKYSTQVFYSYLVVDPVVKGTPRGLDDGEFIEYIRGVSLEEVRAMIHSGDMSVTSGFAALMAIEKLRELGHIM 267
[Close]
BLAST of mRNA_S-firma_F_contig1011.203.1 vs. uniprot
Match: D7G6B3_ECTSI (Nudix hydrolase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6B3_ECTSI)

HSP 1 Score: 185 bits (469), Expect = 1.870e-49
Identity = 90/185 (48.65%), Postives = 121/185 (65.41%), Query Frame = 3 
Query:  759 YECISETPAYKGWRSILRRKIRGPQGKVRSYDVITQEHPSVLVFTWDTQTNTTTILKEYYPGMNRLMYGVVGGNYEADKHTSALQAAACELEEEAHLHEGTWHALMKDERTVAAAGKYSTQIFHSYLVVDPVVKGEPRALDDGEFIEYIRGVSLEEVRAMIYAGDMSVTSGFAALLAIEKLRELG 1313
            ++ ++   AY GWR I+++ +R    K   +DV+ QE PSV VF W TQTNT T++KE+ PG   + +GVV G YE +KH S LQAA  ELEEEAHL  GTWH L +D+ T   A KYS+  F+ +LVVDP V   P+ +DD EFIE  RGVS++E   M+  G++S+ S F  L+   KLR+LG
Sbjct:   48 FKVLNRDLAYSGWRKIVKKTVRVEDEKDYVFDVVHQEEPSVAVFVWHTQTNTLTLIKEFAPGREEVAHGVVAGMYEKNKHDSPLQAAKYELEEEAHLLGGTWHTLCEDDETTINADKYSSNEFYCWLVVDPYVTPTPKPMDDEEFIEIRRGVSMQECMRMVGRGELSIVSSFVVLMGARKLRQLG 232
[Close]
BLAST of mRNA_S-firma_F_contig1011.203.1 vs. uniprot
Match: A0A0G4H3V0_VITBC (Nudix hydrolase domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4H3V0_VITBC)

HSP 1 Score: 158 bits (400), Expect = 3.340e-40
Identity = 87/187 (46.52%), Postives = 111/187 (59.36%), Query Frame = 3 
Query:  759 YECISETPAYKGWRSILRRKIRGPQGKVRSYDVITQEHPSVLVFTWDTQTNTTTILKEYYPGMNRLMYGVVGGNYEADKHTSALQAAACELEEEAHLHEGTWHALMKDERTVAAAGKYSTQIFHSYLVVDPVVKGEPRALDDGEFIEYIRGVSLEEVRAMIYAGDMSVTSGFAALLAIEKLRELGHI 1319
            ++ I E   Y+GW++++ R I  P GK   YD+   + P+V V  WDTQ  TT   +EYYPG N+   G V G YE  KH S L AA  ELEEEAHL  G W  L+ +ER V    KYS QIF+++L +DPV   +PR LDD E I   R V  + V      G  +VT+  AALLAIEKLRE+G +
Sbjct:   37 FKVIGEQMVYQGWKNVMHRTIELPNGKTTRYDINHSDCPAVFVVPWDTQKKTTIFAEEYYPGPNQWKKGFVAGLYERKKHESPLHAAKLELEEEAHLVGGKWINLI-NERGVMDYEKYSDQIFYAFLCLDPVHTDDPRPLDDSEVIYLHRDVPAKAVLEGALHGHFTVTTSLAALLAIEKLREIGEL 222
[Close]
BLAST of mRNA_S-firma_F_contig1011.203.1 vs. uniprot
Match: A0A7S1ZSI2_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZSI2_9STRA)

HSP 1 Score: 152 bits (384), Expect = 2.550e-37
Identity = 84/197 (42.64%), Postives = 115/197 (58.38%), Query Frame = 3 
Query:  759 YECISETPAYKGWRSILRRKIRGPQGKVRSYDVITQEHP-SVLVFTWDTQTNTTTILKEYYPGMNRLMYGVVGGNYEAD---KHTSALQAAACELEEEAHLHEGTWHALMKDER------TVAAAGKYSTQIFHSYLVVDPVVKGEPRALDDGEFIEYIRGVSLEEVRAMIYAGDMSVTSGFAALLAIEKLRELGHI 1319
            YE + E   ++ WRSIL R +R P G V  YDV+ Q+   +V++F W++QT T T+++EY PG +R++YGV  G  E D    H    QAA  ELEEE HL  GTWH L           T     KY+      YLV+D      P+  DD E IE +R V+++EV  +I +G+M++  G+A LLAIEKLR+LG I
Sbjct:   98 YELLKEEVVFQRWRSILSRVVRMPNGNVVDYDVVDQKGVGAVVIFVWNSQTKTATLVREYNPGCHRILYGVAAGLIEDDAKHSHGDPKQAAIMELEEECHLSGGTWHCLTTPSSSSSSLPTSVPMDKYAVTNITPYLVIDASHVTNPKPCDDEEDIEIVRNVTIDEVLRLIRSGEMNLVGGWACLLAIEKLRDLGEI 294
[Close]
BLAST of mRNA_S-firma_F_contig1011.203.1 vs. uniprot
Match: A0A1E7ER69_9STRA (Nudix hydrolase domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7ER69_9STRA)

HSP 1 Score: 148 bits (373), Expect = 1.530e-36
Identity = 81/189 (42.86%), Postives = 114/189 (60.32%), Query Frame = 3 
Query:  759 YECISETPAYKGWRSILRRKIRGPQGKVRSYDVITQE--HPSVLVFTWDTQTNTTTILKEYYPGMNRLMYGVVGGNYEA--DKHTSALQAAACELEEEAHLHEGTWHALMKDERTVAAAGKYSTQIFHSYLVVDPVVKGEPRALDDGEFIEYIRGVSLEEVRAMIYAGDMSVTSGFAALLAIEKLRELG 1313
            +E I E   Y GWR+I++RK+R    KV  +D++  +    +VL+F WDT++ T T+++EY P  NR+++G+  G  E   D H + L AA  ELEEE HL  G W  L+       A  KYST     YLV+DP  +  P+ALD+ E IE I GV++ E+   +  G+M++  GF  LLAIEKLRELG
Sbjct:   48 FEIIDEKTVYSGWRTIVQRKVRMRNNKVVDFDLVGVKTGDSAVLIFAWDTKSKTATLIREYMPASNRILWGLAAGLVEEKHDNHNTEL-AARHELEEECHLKNGKWIPLLHQP---TAMDKYSTTTIQCYLVLDPEKEDNPKALDEEEDIEIIPGVTIPEILRWVNNGEMNLVGGFGCLLAIEKLRELG 232
[Close]
BLAST of mRNA_S-firma_F_contig1011.203.1 vs. uniprot
Match: A0A6U2S3A3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A6U2S3A3_9STRA)

HSP 1 Score: 145 bits (366), Expect = 1.020e-35
Identity = 81/199 (40.70%), Postives = 116/199 (58.29%), Query Frame = 3 
Query:  729 VDPPTSRELTYECISETPAYKGWRSILRRKIRGPQGKVRSYDVITQEHP-SVLVFTWDTQTNTTTILKEYYPGMNRLMYGVVGGNYEADKHTSALQAAAC-ELEEEAHLHEGTWHALMKDERTVAAAGKYSTQIFHSYLVVDPVVKGEPRALDDGEFIEYIRGVSLEEVRAMIYAGDMSVTSGFAALLAIEKLRELGHI 1319
            ++ P  ++  +  IS+   Y  WR I+RR ++ P G    +D++ Q+   +V +F W ++T T T+++EY PG ++ ++GV  G  E DKH    + AA  ELEEE HL  G W+ L  D  TV    KY      +YLV+DP     PR LD  E IE I GVS+ E+  MI +G M++  G+A +LAIEKLRELG I
Sbjct:   29 IEVPQPQQQQHRIISDEVVYSRWRKIIRRVVQFPAGNTVDFDIVDQKGTGAVTIFAWCSKTKTATLVREYNPGCHKSLHGVAAGLIEEDKHQCDPEIAARHELEEECHLQGGRWYRLTADGATVPM-DKYVVTEIAAYLVIDPETVSNPRPLDAEEDIEIISGVSVPEIFDMIRSGGMNLVGGWACMLAIEKLRELGEI 226
[Close]
BLAST of mRNA_S-firma_F_contig1011.203.1 vs. uniprot
Match: A0A482S980_9ARCH (NUDIX hydrolase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S980_9ARCH)

HSP 1 Score: 138 bits (347), Expect = 6.460e-34
Identity = 74/164 (45.12%), Postives = 106/164 (64.63%), Query Frame = 3 
Query:  828 PQGKVRSYDVITQEHPSVLVFTWDTQTNTTTILKEYYPGMNRLMYGVVGGNYEADKHTSALQAAACELEEEAHLHEGTWHALMKDERTVAAAGKYSTQIFHSYLVVD--PVVKGEPRALDDGEFIEYIRGVSLEEVRAMIYAGDMSVTSGFAALLAIEKLRELG 1313
            P G+   YD+ITQ+H SV+VF WDT + TTT++KEY+PG N++M G V G  E +KHTS LQAA  ELEEEAHL    W++L+ +E  +    KYS   F  YL +D  PV   +P  LDD E+I   R V+  E+  ++ +G ++V S +  +L ++KL++LG
Sbjct:    3 PHGQKVDYDIITQKHLSVVVFVWDTASATTTLVKEYHPGPNKVMLGAVAGMCENEKHTSILQAAQHELEEEAHLRTDHWYSLL-NEGAIMPFDKYSNNRFIPYLALDCEPVKSAKP--LDDEEYITIHRNVTYNEMMELMASGQINVVSTYTIMLGLKKLKDLG 163
[Close]
BLAST of mRNA_S-firma_F_contig1011.203.1 vs. uniprot
Match: A0A7S1XDJ4_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XDJ4_9RHOD)

HSP 1 Score: 136 bits (342), Expect = 3.040e-32
Identity = 74/183 (40.44%), Postives = 112/183 (61.20%), Query Frame = 3 
Query:  771 SETPAYKGWRSILRRKIRGPQGKVRSYDVITQEH--PSVLVFTWDTQTNTTTILKEYYPGMNRLMYGVVGGNYEADKHTSALQAAACELEEEAHLHEGTWHALMKDERTVAAA---GKYSTQIFHSYLVVDPVVKGEPRALDDGEFIEYIRGVSLEEVRAMIYAGDMSVTSGFAALLAIEKLR 1304
            S+T  Y+G+RS+ +R++R P G+  ++D++ + H   SV VF +  ++ + T++KEY PG N ++YGV+ G  E  KHTS + AA  EL EEA+L  G    L +   + +A     KYST  FH +L +D  +   P   D  EFIE +RGVSL++VR +++ G M+V    A LLA+E LR
Sbjct:   65 SDTEVYRGYRSVFQRRVRYPSGESFTFDIVGRPHGDSSVFVFPFCRRSRSATLIKEYNPGGNGVLYGVIAGFVEMGKHTSIVDAARRELAEEANLIGGQLIPLQRQTDSSSAGYLKDKYSTDRFHMFLALDSELDPSPPQQDPEEFIEIVRGVSLDQVRTLVFNGQMNVPCSLACLLALEHLR 247
[Close]
BLAST of mRNA_S-firma_F_contig1011.203.1 vs. uniprot
Match: A0A7S2ZFG6_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZFG6_9RHOD)

HSP 1 Score: 120 bits (300), Expect = 8.690e-27
Identity = 64/184 (34.78%), Postives = 107/184 (58.15%), Query Frame = 3 
Query:  759 YECISETPAYKGWRSILRRKIRGPQGKVRSYDVI---TQEHPSVLVFTWDTQTNTTTILKEYYPGMNRLMYGVVGGNYEADKHTSALQAAACELEEEAHLHEGTWHALMKDERTVAAAGKYSTQIFHSYLVVDPVVKGEPRALDDGEFIEYIRGVSLEEVRAMIYAGDMSVTSGFAALLAIEKL 1301
            +  + E  +++ ++++  R IR P GK  S+DV      +  SV VF +DT+T T T+L+EY PG+N +M+G   G ++  KH S   AA  EL EEA L  G++  ++  E    +  KYS  +FH +LV++PV    P   D+ E+I+ ++GV+L  ++ ++  G M++ SGF    A++ L
Sbjct:   40 FSILDEKVSFQRYQTVYERLIRYPNGKRVSFDVFGNPRSDFKSVFVFPYDTRTKTVTLLREYIPGINEVMWGFPAGGFDPKKHKSLEDAARSELSEEAFLTGGSYFPML--ESGGVSQDKYSKNMFHMFLVLNPVEDENPLPRDEEEYIQIVKGVTLPRLQKILAQGGMNLPSGFCGYRALDAL 221
[Close]
BLAST of mRNA_S-firma_F_contig1011.203.1 vs. uniprot
Match: A0A7S4PK06_GUITH (Hypothetical protein n=2 Tax=Geminigeraceae TaxID=589343 RepID=A0A7S4PK06_GUITH)

HSP 1 Score: 120 bits (301), Expect = 1.020e-25
Identity = 71/166 (42.77%), Postives = 94/166 (56.63%), Query Frame = 3 
Query:  831 QGKVRSYDVITQ---EHPSVLVFTWDTQTNTTTILKEYYPGMNRLMYGVVGGNYEADKHTSALQAAACELEEEAHLHEGTWHALMKDERTVAAAGKYSTQIFHSYLVVDPVVKGEPRALDDGEFIEYIRGVSLEEVRAMIYAGDMSVTSGFAALLAIEKLRELGHI 1319
            +GKV  + V+        SV+VF +D++T T  +++EY PG + +  GV GG +E  KH   LQAA  EL EEA L  GTW AL  +        KYS    H YLV+D +    P+  DD E IE  +GV+LEE R  +  GDM   +    LLAI+KLR+LGHI
Sbjct:  199 EGKVVRWHVVGSPLGNFSSVVVFPFDSRTKTCWLIREYCPGTHSIQSGVPGGLFEEKKHKDLLQAARDELNEEAGLMGGTWIALAPEG---IPQDKYSRNRLHPYLVIDCMRDPNPKPKDDDEIIEVEQGVALEEARRRVLEGDMPAPAAMVTLLAIDKLRQLGHI 361
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1011.203.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
D7G0V2_ECTSI9.020e-14191.27Nudix hydrolase domain-containing protein n=2 Tax=... [more]
D7G6B3_ECTSI1.870e-4948.65Nudix hydrolase domain-containing protein n=2 Tax=... [more]
A0A0G4H3V0_VITBC3.340e-4046.52Nudix hydrolase domain-containing protein n=1 Tax=... [more]
A0A7S1ZSI2_9STRA2.550e-3742.64Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A1E7ER69_9STRA1.530e-3642.86Nudix hydrolase domain-containing protein n=1 Tax=... [more]
A0A6U2S3A3_9STRA1.020e-3540.70Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A482S980_9ARCH6.460e-3445.12NUDIX hydrolase n=1 Tax=archaeon TaxID=1906665 Rep... [more]
A0A7S1XDJ4_9RHOD3.040e-3240.44Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S2ZFG6_9RHOD8.690e-2734.78Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S4PK06_GUITH1.020e-2542.77Hypothetical protein n=2 Tax=Geminigeraceae TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig1011contigS-firma_F_contig1011:6512..13160 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Seed ortholog2880.D7G0V2
PFAMsNUDIX
Max annot lvl2759|Eukaryota
Evalue1.03e-151
EggNOG OGs2CFIT@1|root,2S4K6@2759|Eukaryota
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionNUDIX hydrolase domain-like
Ec32 orthologEc-23_002190.1
Exons6
Model size2877
Cds size747
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig1011.203.1prot_S-firma_F_contig1011.203.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig1011 7090..11608 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815538.535824-UTR-S-firma_F_contig1011:6511..70891622815538.535824-UTR-S-firma_F_contig1011:6511..7089Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig1011 6512..7089 +
1696949399.8298488-UTR-S-firma_F_contig1011:6511..70891696949399.8298488-UTR-S-firma_F_contig1011:6511..7089Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig1011 6512..7089 +
1622815538.6138978-UTR-S-firma_F_contig1011:11608..131601622815538.6138978-UTR-S-firma_F_contig1011:11608..13160Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig1011 11609..13160 +
1696949399.972174-UTR-S-firma_F_contig1011:11608..131601696949399.972174-UTR-S-firma_F_contig1011:11608..13160Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig1011 11609..13160 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815538.5459929-CDS-S-firma_F_contig1011:7089..71521622815538.5459929-CDS-S-firma_F_contig1011:7089..7152Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1011 7090..7152 +
1696949399.8557758-CDS-S-firma_F_contig1011:7089..71521696949399.8557758-CDS-S-firma_F_contig1011:7089..7152Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1011 7090..7152 +
1622815538.5565488-CDS-S-firma_F_contig1011:9524..96651622815538.5565488-CDS-S-firma_F_contig1011:9524..9665Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1011 9525..9665 +
1696949399.875325-CDS-S-firma_F_contig1011:9524..96651696949399.875325-CDS-S-firma_F_contig1011:9524..9665Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1011 9525..9665 +
1622815538.571646-CDS-S-firma_F_contig1011:10109..102321622815538.571646-CDS-S-firma_F_contig1011:10109..10232Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1011 10110..10232 +
1696949399.8917654-CDS-S-firma_F_contig1011:10109..102321696949399.8917654-CDS-S-firma_F_contig1011:10109..10232Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1011 10110..10232 +
1622815538.5803864-CDS-S-firma_F_contig1011:10514..106221622815538.5803864-CDS-S-firma_F_contig1011:10514..10622Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1011 10515..10622 +
1696949399.902306-CDS-S-firma_F_contig1011:10514..106221696949399.902306-CDS-S-firma_F_contig1011:10514..10622Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1011 10515..10622 +
1622815538.593921-CDS-S-firma_F_contig1011:10922..111351622815538.593921-CDS-S-firma_F_contig1011:10922..11135Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1011 10923..11135 +
1696949399.9127357-CDS-S-firma_F_contig1011:10922..111351696949399.9127357-CDS-S-firma_F_contig1011:10922..11135Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1011 10923..11135 +
1622815538.60388-CDS-S-firma_F_contig1011:11509..116081622815538.60388-CDS-S-firma_F_contig1011:11509..11608Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1011 11510..11608 +
1696949399.960371-CDS-S-firma_F_contig1011:11509..116081696949399.960371-CDS-S-firma_F_contig1011:11509..11608Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1011 11510..11608 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig1011.203.1

>prot_S-firma_F_contig1011.203.1 ID=prot_S-firma_F_contig1011.203.1|Name=mRNA_S-firma_F_contig1011.203.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=249bp
MRSCEKSKSGGGFSGLLWWKKGPSNSTAFDATEHVSKTPNLTPVVRQEVM
VDPPTSRELTYECISETPAYKGWRSILRRKIRGPQGKVRSYDVITQEHPS
VLVFTWDTQTNTTTILKEYYPGMNRLMYGVVGGNYEADKHTSALQAAACE
LEEEAHLHEGTWHALMKDERTVAAAGKYSTQIFHSYLVVDPVVKGEPRAL
DDGEFIEYIRGVSLEEVRAMIYAGDMSVTSGFAALLAIEKLRELGHIM*
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mRNA from alignment at S-firma_F_contig1011:6512..13160+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig1011.203.1 ID=mRNA_S-firma_F_contig1011.203.1|Name=mRNA_S-firma_F_contig1011.203.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=6649bp|location=Sequence derived from alignment at S-firma_F_contig1011:6512..13160+ (Sphaerotrichia firma ET2_F female)
GTTGAGGCTGCCCTCGTAAAAACGTGCTGCAGTATTTAGTGTTTTCTCCT
CGACATGTAACGATGGATTATTAAGCGGTGAATTTGTGTGTGGGGTACAT
GCATGCGAAACAGAGAAGAATAAAGGCACCGCAGAGGAAATTAACTCTGC
CGCTCATCAGCTCTCAGAAGGCAAAGCACCAAATACATGTTCCAGTTCCC
AAGCTCGGGAGTGGCGTAGGATACTGTGTATGTAGAACATTGCGAATCGG
GGGTACGTATTTCGAGCAAACCCGGTATCCGTGGGTCTATTCGCGTACCC
CCCTCGGCGTGATCTCGGGAGGCGGAGCTGGGACGCGGTCCATAGCAGAT
AGAGATTGAGTCCTGCTTCTTGTCCCGTCTCTGCGTCTTCCCAAGAAGCA
CATTTAGCAGCGGACCAACCCTTGGCGCGCTAGGCAGGAGAGCTAGAGCG
ACAGAGTGGAGACACACGCGACAGGCGTTGGAATTGGGAAGTTCTGGGGG
TCCTCACAACCGGACAGCGTGTGTGTCATCCTGGCGAGCGTTGTGCTGGG
GCAGAGATTGGGTAGGTAGGCGTTGGAGATGCGCAGCTGCGAGAAGAGCA
AGAGCGGCGGTGGCTTCTCCGGGCTCTTGTGGTGGAAAAAGGTGCGAAAA
GAAGTTCGAAAGTTGCGTGTGAAAGTGTGTGTGCGTGGCCTCAATCTCTG
TTGTCTCCCCTGTTGGTGGCCGTTACTTTCTCGAATCCTCTCCGTCTTGT
TTTGATGGCATAAATGTACGTGGCCTGCTCTCGGAGGTGTGCGCAAACCG
CTGTTCGTTACACCGACCGCGATGCGTACGACAAGGCTTGGGGCAACGGA
AGCAGCCGGGCGGTTCAGCTAGCACCGAAACAGACGGAAATAAATCACCT
GTACATCCAATCAACACACCATTTTAGCTCTGTTTGTCGGCGTGTTTTCC
GCCGGGATGAACGGAGATACTTTCACCGTTTACATGGTCGCTCTCGCGGT
TTGGCGTGCGTGTCGACTGCCCGCCTCTATCGGCCAGGAGCGACCGACAG
GCGCAGCAAACCAAACGAGTATCTGCAGCCGGCGCAAATGCTTCGGGTTG
TTAGCTTAAGCCATTGCTCGCTTCGAGAAAGCTTCCGACTTTTTTTTGCC
CTGTCTCTACCGGTATGTAGTTCTATTTCCTCTCAACACGAGCGAACCAA
CCAAACTTCCAAGCAGCGGGTGGTTGCGATGCGATGAGGCTTGTTCCTAC
CAGCCAGAGGCTCTCTGTCGCGCATGGAAGCGATGCTGCTGCCTGACATT
TGCAGAGACACATCGCCGTGGAAGTTCACCTCGCAATTATGCTGCCGTAG
CTCTACGCACACGCCCAGTTTTTGTTTCCAAACCATCAGCGAGACCCAGC
AGTACGCCTGCTGTAGATACCTCCGCCGGCGGCCCGCCCGTCCGCCCTCT
CTTGCACAATGCCGGTACAACGGTACCACCACTGTTGCACCGAGGCCTCC
TAGGCCTCGCGCTCTGCCTTTTGTCATCTACCTATTGTACCTAATAGCTT
CTTTTTTTTGCGGTCGCGGGGGAAGCTCTCTATACTTCGACCGATATTTG
TGTTGGTGTGCACCGACCGTGCCGCAGTTCGCACAACTCCTTGTGGTTTG
AGCTGCAACACAAGCCGGTATACATGGGGTCTAGCGTCTAAATTGGGTGG
GTCCGCTCCGAGCAGCTGCAAGCGAACTCTTTCCCCCAGGGTTTCTCTGT
GGGCACAGCAGTGTTTCGTATTTAGCGTTTTGGAACGTTGGGGGGCGCCC
TCTCGGTGTAAAACAACGCCTCCGGGGTCTTACGGGAGCTGACAACGGTG
GTTCTGATTTTCGTTCTAAAATCAAGATAATAAGGCCAAGTATAACGAAA
ACCAGCTTCCCGTCGGAAGTCAAGCTTTTTCAGACATGGAATCACTAGAG
CATACCGTGGAGAGGTCACGTGTGTGTTGGCACGCTCAGATCTGCTGCTG
GAACGGAGATATCGAAGGACGCAGCAGTCGCTGGACGGTCAGCAAATTTG
ATCGACAAAAAACTTTGTTGCGGCTGTGCTTGCCGCCACGGGCCGTAACC
GCCTGAACTGCGGGTCTACAGCAGTAGCTGATACCACCAGCTACTGCTGA
GGACCCGCAGTTCAGGAGATTGAAGTCCGTGGCGACGAGCACAGCAGTGG
AATGCAGGGTGTGTCGGTCAATTTGCGGAGAATCTCGGTTGCTGCTGATT
TATAGGAGTATGCAACTCTCGATATCAGCCCCAAAGCAGCGAATTTGAGC
GTTCCAACGCACACTTGCGGGGCTCTAGAGTGTTGTCTATTGGTTCCATG
CCCGAAATTGCTGACCCTACCAAGGCAGACCTTAGTTGAGCGCCCGCCGT
TTGGGCTCTTTCACTTGATTTTAAACTGTGGGGAGATTTAGAGGTATGAG
CTTGGAGGTAGACTTCGTCATGTGTATGTACATAACAGCCTTTACATACT
GGTTTGATGTATCCCGTGTGTGTTGGGTGCTCGGTCTTTTTCAAACCCAG
GCAACCCCAAAGATGGGTTGTCATCACCGCCTGAAGCTACCTGTGTTGGC
TAGTGTTGACACACACAGGCAACCCAATCCGTGACTCTAAATCTAAAATG
AAACCCTTCAAACAAAACCATGGTCTGAACCGGGCACGCCCGAAGGAGCC
CAGTTCCGCATGAAGCGGTCCAAGCTGTCAATACCTCCGAGTATACGCGG
AATATTGCCCCAAAAACGAAACGCAGAAAGCAGTAGTACCAGGTATTATC
GTATGATCGATATGCTGTTATGCCATACAAACCTTGCTTCGCAAAGTATG
TGACAAGAAAATAATGCACGTCTCAACATTGGCAACACCCACCAACCTTA
ACATCTGGTGTACAAGCAGAACGCGGTAAGATACGCTCACCCGATTAAAT
TCCGATTCATTGGCGATTATTTCAAACCATTCAACATTCTATTGCTTACG
TCTCTGGTACCAGGGCCCGAGCAACTCTACCGCCTTCGACGCCACCGAGC
ACGTGTCGAAGACCCCTAACCTTACTCCGGTGGTGCGCCAGGAGGTGATG
GTAGATCCACCTACTTCGCGCGAGCTGACCTACGAGTGCATCAGCGAAAC
ACCGGTGAGCACACTCTTTTCGGTTGTTGTTTTGACCTATTTTTTGTTTG
CAGACGCGTGGATGTTCTGTTCCTTTGCCGCGCACCCGATGCCGTGTTAG
TCCGTTACGGCAGCACTGCTGTACGCAGTGGTGTGGGCAAATGTGGGTTG
GACTTTCGATAGCTTTGGCGCCACCCTAGCCTACGCATACTGCTGTTTGA
TACGGAGAGAACCCATCGTTCGATCATGTGGGAAAGCTCTGAGACCGGTA
TCGTCAGGACCATTAATCAAGAAGTTGGACCTCCAACGCCGGACAAGCCT
TCGTATTTACCCACACACGTCTATTAGCCTAGACTTCATCATTAACGACA
AAGCTCCTCGAAACGGTGCTCGCCAATCGCCCAACCCACCGATCGAACTC
CCTCTTGCCATGCCATCTACTTCTCTCTCACCCGCGCCCCTATTTCAGGC
GTACAAGGGATGGCGGAGTATCCTCCGACGAAAAATTCGTGGGCCGCAGG
GCAAGGTCCGATCGTATGACGTCATCACCCAAGAGCACCCGTCGGTGCTT
GTCTTTACATGGGATACCCAGGTGAGGTTTCCGTTGGACGCGAGGAGGAA
CACACGGGAATGTAGGTGGGCAAAACGGGGTGCTGAAGAACTGTCACCCC
GCTTTTGCAGCGCACGCAAGTCAGTGCAGCATCCAGAGCCGCCGTTGGCG
TGTATCCCCCCCTGTTGAGCAGAAAATGGGATCCTATGCAAGTGTGAGGT
GCTGCGAAAATTTGATCCGCGACGTTTTGTCATTTTTTGCCCATGGTTTG
TTGTTCGCGTTTTGTTTTGCTTTTGTTTTGCTTTTGTTTTGATGTTTTGG
CAGACCAACACGACGACGATTTTGAAAGAGTACTATCCGGGGATGAACCG
CCTCATGTACGGAGTCGTCGGAGGGAACTACGAGGCGGATAAGCACACGT
CGGCGTTACAGGTGCGCTTTCCTCTCTTCCAGCGAATGCTGTTGGGCCTT
GCAGCTCGATCCTGTCTCTGGTTGAACACAGACGCAGAATTGTCACCATC
ATCGGTCGCTCATCCCCACGGGCGATATTACGATATCATGAACTGCTGTG
TCCCGTTTAATACCCTTGGGACTTTCGGGGCGTTGGCTTACGATTTCGCG
CCCTGGCCGCTGCTGTGGGCTTGTTAAACAAGGCTCACTGCGTTCATCAT
TTCTATTGTACACATCCCATACAAAGCTCTAACATCTCCGTTTTTGCGTG
TCGGCACACAGGCCGCCGCGTGCGAGCTAGAGGAGGAGGCACATCTCCAT
GAGGGCACCTGGCACGCCCTCATGAAGGACGAGAGGACGGTTGCGGCGGC
CGGGAAGTACTCGACGCAAATTTTCCACTCGTACCTCGTTGTGGACCCCG
TCGTCAAGGGCGAGCCGAGAGCGCTCGATGACGGGGAGTTCATCGAGTAC
ATTCGAGGCGTTTCGCTAGAAGAGGTGCGTCAGTGTGCTGTTTTTCCCCG
TTTGTTTCATGTTTCACCGTAGTCATGTTACCATTGACCGCGCGGACCGG
CCGACCCATGCGGGCTGCGCAAGCATTTTTTGTTATCATACGTTTTTTCG
ACGCAACAGAGTACGTTTTTTTGAGCCAACACGAGAGGATTCGGTTCATT
TTCCGGCTGCTAGAGACGTTTTTTTTTTTTTTTCTCGTTGTTGTGTTGAA
AACCGGCAGCGCTCCTGTGCTTCCTGCCTCTTTTCCCCGACTTGTTTCGT
TTCTGTCTCTCTTATTTTGTTGCGGTGTCTTTCGTATTGGGTCGCTCGCT
TCCTGGACGCTGACCTTGTAATACTGGTTGATCTTGCTTTGATGAAAGGT
GCGGGCGATGATTTACGCGGGAGACATGAGCGTCACCTCTGGGTTCGCGG
CGCTTTTGGCAATCGAGAAGCTCCGGGAGTTGGGCCACATCATGTGACAT
CGTGTCGTGTTGCCTCGTGCTTCGTTGTTGTCGTCACATCTTGTGCCTTG
AAAAATAGCGTGTGTTTTGTTTTTGTTTTCTTTTACGGCGGACGACAAGG
TGGGCGGGAGAGCTGGGAGGGGAGAGAGAGAGGGAGGGAGAGATGGTGGA
CGGGCGACGCAAATAGTCCATACTCACCGTTGGCGGGTCACTCGTTGATG
TTAGGTTTGTTTGTTTGTTTTTTCTTCCCGGTGTAGCTCCTTTGTTTTGT
GTGTATGAAGTGAATGGGTGCGCACCGAAGAGAACTCCGCACTCCGCGGG
CAGCCGTGTACCCTAGACCCGTTGCGGCTTCCTAGGTGGGGTTGTCGACG
GCACCGCGTCAAACGGTGTTTCGTAGCCCTGGGACGGCTGCGATTTCTGT
GTGGAGGCATCGCAGCATCATGCTCCCTTCCTAGGGACCCGGCGTCCTTT
TTTTGCTCGAAGGTGCGACTTGGCGGTTTCTCTTGTTTGGGGCACCCAGC
TGTGTCTTTTGTTAGTGGGTGCCCCAGAGACGGGAATGGGCCGGTGGCGT
CGTTTCGGGATGTAAATTGTTTTTGTTCTTTGTTCTGGGCCGCAGGCGCA
GCTAAATTTCTCAGGCAAGTAGCAGCGTAGTGCTTGGTGCGCATAAATGA
CTTAAGATTGTGGACACCCCGCCGCACCGCATCACACCGTGGCGAAGAAA
TGCCCCATCATAGTTCAAGCCGATACTAAAACACCACTCCTTTTTTTTCT
CCTTTGTTTGACAACGCCTTACTGTGCTCGCTTGGCGCGCTTCGCCGGTA
GCTGCATGGGGGGTAAAAAAAAAAAAACAGTTCTAGCCTATTGGTTCCTT
ACGGGTGTGTGGACCATTAACCGCGTCTACCAGGAAGAAACGGGGGCCCT
TGCTGGTCCCCAAGTTGGTCGAAGTCACTCGCTGGTGCTCGTTGATTGTT
AGTGGCCTCAGCAAGCTTTTCTCCCCCTTGTTCCCCGGCCGAGATTAGGC
CTGGGCAGGGAGCACGCCGAGAGGAGGGTGCTCATTTTTGGCGGGAGAGG
GAGGGGTTGAGGGTGCTTTTTGTGTTGGCGCGTGAAGCGGGTTTGCTGTT
TCCGTTTTTTCCCCTGTCTCTTGAGACCGAATGAAATGGCGGCTCGCCTG
TTGCCCCATCGCGTTCGAACGAGGTCTGCCCTTGTCGCTTGCTTTTTTGC
GGAGGGCGGGGGGAGGTTGGTTGTTTGCTTCGCTGGACCGAGATAATACC
GCAATATAATTCTCTTCAGTTTTTGCTGAAAATGTCGGTTCGTTTTTGGG
CGTCCCAGCATTTGCAGTACCGAGTTCTCGGTCGCGTGCTTTGCCTTGAG
CGGTGTGCCTTGTGCCTCTGCGATGTTGTTTGTCTGTTTATGCGTGCTTT
GTCTTTTCCGATGGGTGCCCGTTATGTTCTCTTGGTGGTTCTTTGATTGT
CTCGTGTCGATTTTTTTCATATATTTTTTGATCGACAGAATCTCTCTTAA
CGGGAGAAGTTTTGGGTAACGGGCATTGCAGGGGTTTTAGGGGGAAACG
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Coding sequence (CDS) from alignment at S-firma_F_contig1011:6512..13160+

>mRNA_S-firma_F_contig1011.203.1 ID=mRNA_S-firma_F_contig1011.203.1|Name=mRNA_S-firma_F_contig1011.203.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1494bp|location=Sequence derived from alignment at S-firma_F_contig1011:6512..13160+ (Sphaerotrichia firma ET2_F female)
ATGCGCAGCTGCGAGAAGAGCAAGAGCGGCGGTGGCTTCTCCGGGCTCTT
GTGGTGGAAAAAGATGCGCAGCTGCGAGAAGAGCAAGAGCGGCGGTGGCT
TCTCCGGGCTCTTGTGGTGGAAAAAGGGCCCGAGCAACTCTACCGCCTTC
GACGCCACCGAGCACGTGTCGAAGACCCCTAACCTTACTCCGGTGGTGCG
CCAGGAGGTGATGGTAGATCCACCTACTTCGCGCGAGCTGACCTACGAGT
GCATCAGCGAAACACCGGGCCCGAGCAACTCTACCGCCTTCGACGCCACC
GAGCACGTGTCGAAGACCCCTAACCTTACTCCGGTGGTGCGCCAGGAGGT
GATGGTAGATCCACCTACTTCGCGCGAGCTGACCTACGAGTGCATCAGCG
AAACACCGGCGTACAAGGGATGGCGGAGTATCCTCCGACGAAAAATTCGT
GGGCCGCAGGGCAAGGTCCGATCGTATGACGTCATCACCCAAGAGCACCC
GTCGGTGCTTGTCTTTACATGGGATACCCAGGCGTACAAGGGATGGCGGA
GTATCCTCCGACGAAAAATTCGTGGGCCGCAGGGCAAGGTCCGATCGTAT
GACGTCATCACCCAAGAGCACCCGTCGGTGCTTGTCTTTACATGGGATAC
CCAGACCAACACGACGACGATTTTGAAAGAGTACTATCCGGGGATGAACC
GCCTCATGTACGGAGTCGTCGGAGGGAACTACGAGGCGGATAAGCACACG
TCGGCGTTACAGACCAACACGACGACGATTTTGAAAGAGTACTATCCGGG
GATGAACCGCCTCATGTACGGAGTCGTCGGAGGGAACTACGAGGCGGATA
AGCACACGTCGGCGTTACAGGCCGCCGCGTGCGAGCTAGAGGAGGAGGCA
CATCTCCATGAGGGCACCTGGCACGCCCTCATGAAGGACGAGAGGACGGT
TGCGGCGGCCGGGAAGTACTCGACGCAAATTTTCCACTCGTACCTCGTTG
TGGACCCCGTCGTCAAGGGCGAGCCGAGAGCGCTCGATGACGGGGAGTTC
ATCGAGTACATTCGAGGCGTTTCGCTAGAAGAGGCCGCCGCGTGCGAGCT
AGAGGAGGAGGCACATCTCCATGAGGGCACCTGGCACGCCCTCATGAAGG
ACGAGAGGACGGTTGCGGCGGCCGGGAAGTACTCGACGCAAATTTTCCAC
TCGTACCTCGTTGTGGACCCCGTCGTCAAGGGCGAGCCGAGAGCGCTCGA
TGACGGGGAGTTCATCGAGTACATTCGAGGCGTTTCGCTAGAAGAGGTGC
GGGCGATGATTTACGCGGGAGACATGAGCGTCACCTCTGGGTTCGCGGCG
CTTTTGGCAATCGAGAAGCTCCGGGAGTTGGGCCACATCATGTGAGTGCG
GGCGATGATTTACGCGGGAGACATGAGCGTCACCTCTGGGTTCGCGGCGC
TTTTGGCAATCGAGAAGCTCCGGGAGTTGGGCCACATCATGTGA
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