mRNA_S-firma_F_contig10102.195.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig10102.195.1
Unique NamemRNA_S-firma_F_contig10102.195.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
BLAST of mRNA_S-firma_F_contig10102.195.1 vs. uniprot
Match: D7FVU2_ECTSI (AB hydrolase-1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVU2_ECTSI)

HSP 1 Score: 352 bits (903), Expect = 1.010e-113
Identity = 180/290 (62.07%), Postives = 208/290 (71.72%), Query Frame = 1
Query:  334 YPIEGKRLMHKIFKTVDWLCAQEDADTTFASFLSGWFVGADVSELRRGNVVQFLAWTMYAKEWSATGAGERRDIMDTVKVVEGKLGPGFKFRPGYNPRVTSIRHTLDPVVPFSHRPLALYAALGLCRAVVRAGLNLSGFRRSLAPCGTFYYWFR-APAAXXXXXXXXXXXXXXXXXXXXXXXXXXVAPMVLFHGVGTGLPFYVLALWKMCRGRVRAVGSILFAATSVIVESPSIAMSLALLRGHRPPSESQLVESVEGIMGRHGLKTAAFFGHSFGSISVAWMARRKPHV 1200
            YPI+GKRL+HK+ +TVDWL  QEDADTTF SFLSGWF+GAD SEL+RGN+V FLAWT+YAK+       ER+++M  +K++EG+LG   +  PG+N RV  IRHTLD VVPFSHRPLALYA LGL RA++R  L   GFRR LAPCG+F YW R AP +   X                        P+V FHGVG GLPFYVLALWKMCR R           TS+IVE+PSI MSLALLRGH PPSE QLVESVEGI+ RHG+K AAFFGHSFGSISVAWMARRKPH+
Sbjct:    3 YPIDGKRLIHKVLETVDWLSEQEDADTTFESFLSGWFLGADCSELKRGNLVVFLAWTLYAKDVDMLSKAERKNVMSMIKLIEGRLGRTLE--PGFNERVKCIRHTLDRVVPFSHRPLALYAVLGLARALLRIALGFCGFRRRLAPCGSFMYWHRQAPPSAAAXAAAMPEKTEGP------------GPIVFFHGVGAGLPFYVLALWKMCRHR-----------TSIIVEAPSIMMSLALLRGHTPPSEDQLVESVEGILERHGVKRAAFFGHSFGSISVAWMARRKPHL 267          
BLAST of mRNA_S-firma_F_contig10102.195.1 vs. uniprot
Match: W7T5P3_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T5P3_9STRA)

HSP 1 Score: 132 bits (331), Expect = 4.750e-30
Identity = 93/320 (29.06%), Postives = 145/320 (45.31%), Query Frame = 1
Query:  238 VLLAWLMAELLFLGVILVYLAPRMNQLEPPAKYPIEGKRLMHKIFKTVDWLCAQEDADTTFASFLSGWFVGADVSELRRGNVVQFLAWTMYAKEWSATGAGERRDIMDTVKVVEGKLGPGFKFRPGYNPRVTSIRHTLDPVVPFSHRPLALYAALGLCRAVVRAGLNLSGFRRSLAPCGTFYYWFRAPAAXXXXXXXXXXXXXXXXXXXXXXXXXXVAPMVLFHGVGTGLPFYVLALWKMCRGRVRAVGSILFAATSVIVESPSIAMSLALLRGHRPPSESQLVESVEGIMGRHGLKTAAFFGHSFGSISVAWMARRKPH 1197
            +L +WL+ E+ F   +   + P +N+L  P    +EG       F  +  + +Q      F  F SGWF+GA + ++RRGNV + LAW +Y+K  S     ++  + D +  +  K+        GYNP+V  +  TLD +  + HRPL  YA+L + + +  + L L GFRR         YW+R+                               PMV FHG+  GL  Y+L +  + RGR             V++E P IAM L      +      +V++VE I  RH +   +  GHSFGS+  AW+++   H
Sbjct:   34 LLSSWLLCEIAFYFYLRYIVLPELNRLTTP----VEGAHTPWDEFHKIIDVVSQLKESYAFERFFSGWFLGAPIKDIRRGNVREMLAWALYSKAQSTLTVRQKACVEDVLYWL--KMRFQIDCPEGYNPQVRPMLLTLDKIT-YMHRPLVFYASLTVIQVLGHSVLTLLGFRRH--EVNGIAYWYRSRVRDVRPGEEASL------------------PMVFFHGISPGLNLYLLVIHTLSRGR-----------KMVLMEVPHIAMCL----NFKAKRLGDMVKTVEIIAKRHRMPYFSVVGHSFGSLCAAWVSKHLKH 311          
BLAST of mRNA_S-firma_F_contig10102.195.1 vs. uniprot
Match: A0A6U4GNQ7_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4GNQ7_9STRA)

HSP 1 Score: 127 bits (318), Expect = 9.930e-29
Identity = 101/318 (31.76%), Postives = 143/318 (44.97%), Query Frame = 1
Query:  238 VLLAWLMAELLFLGVILVYLAPRMNQLEPPAKYPIEGKRLMHKIFKTVDWLCAQEDADTTFASFLSGWFVGADVSELRRGNVVQFLAWTMYAKEWSATGAGERRDIMD-TVKVVEGKLGPGFKFRPGYNPRVTSIRH---TLDPVVPFSHRPLALYAALGLCRAVVRAGLNLSGFRRSLAPCGTFYYWFRAPAAXXXXXXXXXXXXXXXXXXXXXXXXXXVAPMVLFHGVGTGLPFYVLALWKMCRGRVRAVGSILFAATSVIVESPSIAMSLALLRGHRPPSESQLVESVEGIMGRHGLKTAAFFGHSFGSISVAWM 1179
            VL  W   ELLF     V L  +++++  P  YP+  + LMH++   V  L      D  F  FLS WF+ A   +L  G+   F +W +YA         E  ++ + TV+ V      G   + G  P+   I H   TL P+    HRPL  YA + L   +  A L ++GFRR         YW R  A                             P+V+FHG+ +G+  Y+  L + C GR           T++I E P I+M+L L     PPS   +V +VEGI  RH ++ AAF GHSFGS+ +AWM
Sbjct:   25 VLGVWFFLELLFWAAC-VQLRRKLDRINTPPPYPMPKRELMHRVLGLVKDL----GDDYPFDRFLSDWFIRAPYEKLTVGSARSFFSWALYAHREEDLSKAESAELDELTVEAVAFAKAQGKPLKEG--PKTEGIDHVDFTLRPLESV-HRPLLWYAIVALKAKLSGAILLVNGFRRF--EYDGLVYWHRDAADAGRPALDLEHPGHGRL------------PLVVFHGISSGIFLYLPMLLRYCGGR-----------TAMIFEQPHISMALDLA----PPSRDAVVAAVEGICRRHRVRRAAFLGHSFGSVPLAWM 305          
BLAST of mRNA_S-firma_F_contig10102.195.1 vs. uniprot
Match: A0A0G4HL36_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HL36_9ALVE)

HSP 1 Score: 110 bits (276), Expect = 1.120e-22
Identity = 90/329 (27.36%), Postives = 143/329 (43.47%), Query Frame = 1
Query:  226 MLSWVLLAWLMAELLFLGVILVYLAPRMNQLEPPAKYPIEGKRLMHKIFKTVDWLCAQEDADTT-FASFLSGWFVGADVSELRRGNVVQFLAWTMYAKEWSATGAGERRDIMDTVKVVEGKLGPGFKFRPGYNPRVTSIRHTLDPVVPFSHRPLALYAALGLCRAVVRAGLNLSGFRRSLAPCGTFYYWFRAPAAXXXXXXXXXXXXXXXXXXXXXXXXXXVAPMVLFHGVGTGLPFYVLALWKMCRGRVRAVGSILFAATSVIVESPSIAMSLALLRGH---RPPSESQLVESVEGIMGRHGLKTAAFFGHSFGSISVAWMARRKPHV 1200
            +L  + + W++ E+ F G+    L        PP     + +R+  ++ +    L  + D D     +F+SGWF GA   ++ RGN+ QFLAW+++ +  +A    ER ++   ++ +E   G  FK   G+N  V +IR +LD +    HRPL +YA +          L L+G+   L   G F YW+R+ A                             P+V  HG+G GL +Y L L    RG                 E P   + L  +        PS  + VE+V  I+  +    A F GHS+GSI+V+W  + KP +
Sbjct:   34 ILELLFMGWIIIEVAFYGLFRSQLRNMQWLSTPPVVLQPQRRRIFDQVLRA---LSVETDKDAKHLPTFISGWFFGAPAEKVWRGNIAQFLAWSLWYRFPAALDEEEREELEGYIRELEEIQGSQFKE--GFNHEVKAIRLSLDQLNAL-HRPLFVYAIVKGMDWAASHVLRLAGYE--LRCIGGFNYWYRSAAPGSPPRY----------------------PVVFVHGLGHGLVYY-LELLGALRG-----------------ERPLFLLELRYVSSRVWEHIPSVKRTVEAVHTILTENNFTRAIFIGHSYGSIAVSWCIKYKPEM 314          
BLAST of mRNA_S-firma_F_contig10102.195.1 vs. uniprot
Match: W7TQ04_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQ04_9STRA)

HSP 1 Score: 104 bits (260), Expect = 1.200e-20
Identity = 90/324 (27.78%), Postives = 144/324 (44.44%), Query Frame = 1
Query:  226 MLSWVLLAWLMAELLFLGVILVYLAPRMNQLEPPAKYPIEGKRLMHKIFKTVDWLCAQEDADTTFASFLSGWFVGADVSELRRGNVVQFLAWTMYAKEWSATGAGERRDIMDTVKVVEGKLGPGFKFRPGYNPRVTSIRHTLDPVVPFSHRPLALYAALGLC-RAVVRAGLNLSGFRRSLAPCGTFYYWFRAPAAXXXXXXXXXXXXXXXXXXXXXXXXXXVAPMVLFHGVGTGLPFYVLALWKMCRGRVRAVGSILFAATSVIVESPSIAMSLALLRGHRPPSESQLVESVEGIMGRHGLKTAAFFGHSFGSISVAWMARRKP 1194
            +L +++  WL+ E LF  ++++ +  R++ L PP +   E +  + K+   VD +         F +FL+ W   A +SEL+RGNV QFLAW + ++        +   IM  V +++ +         G N  V ++R TL+P+    HRPL +Y  + +  R      L L GF R L   G   YW+R                                P+V FHGV  G   Y      +  GR           ++V+VE P IAMSL   R     +E+++ E+++ I  RH ++     GHS+G+I   W+ R  P
Sbjct:   37 ILPFLIFCWLLCEGLFY-LVMMLVHRRLDVLTPPERSQHEPETYVRKVMDIVDSVRGVYP----FETFLTRWCGSATLSELKRGNVAQFLAWALLSQGVEDLLPRDYTMIMRMVDMIDQRYT--LNLEQGLNTDVRTLRMTLEPLEVI-HRPLCVYLGVTVIPRLFGNCVLRLQGFER-LEHQG-LVYWYRPSREWPSSARQL--------------------PLVFFHGVSPGQCAYAGLTTLLSEGR-----------SAVLVEIPHIAMSLEAFRAK---TEAEVTEAMKSICARHHIRHFTVAGHSYGTIWAGWVLRAMP 316          
BLAST of mRNA_S-firma_F_contig10102.195.1 vs. uniprot
Match: A0A7S1MID4_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1MID4_ALECA)

HSP 1 Score: 101 bits (251), Expect = 1.230e-19
Identity = 74/283 (26.15%), Postives = 120/283 (42.40%), Query Frame = 1
Query:  352 RLMHKIFKTVDWLCAQEDADTTFASFLSGWFVGADVSELRRGNVVQFLAWTMYAKEWSATGAGERRDIMDTVKVVEGKLGPGFKFRPGYNPRVTSIRHTLDPVVPFSHRPLALYAALGLCRAVVRAGLNLSGFRRSLAPCGTFYYWFRAPAAXXXXXXXXXXXXXXXXXXXXXXXXXXVAPMVLFHGVGTGLPFYVLALWKMCRGRVRAVGSILFAATSVIVESPSIAMSLALLRGHRPPSESQLVESVEGIMGRHGLKTAAFFGHSFGSISVAWMARRKPHV 1200
            R +  + +   W  A E    T   +L GWF+G+ +SE+RRGN+V+F+AW  + +  +     ER+  ++ V+ +E + G  + F+ G+N  V  IR   D +  + H PL  Y +L   R   R  + L GF     P G  +  F  P                              P+V FHG+G GLP Y+L + ++   R              +VE P I+     +      S   +   V  ++  +G   A   GHS+G   ++W+ R +P V
Sbjct:  130 RTLRLVEEVKSW-SAPEGPGRTPREWLEGWFLGSALSEIRRGNMVEFVAWAFWTRYEAELDESERQVALEMVEELERRFG--WSFQDGHNSAVKPIRINFDSLTVWCH-PLVYYMSLYALRVSTRHTMRLFGFTYHTGPGGMSF--FHKPLRKQPGMLVVGGEALPNKAE---------GPVVFFHGLGVGLPPYLLFIRRLAASR-----------ECFVVELPEISQ----VGTETVLSPDAMAAEVATMLQAYGHSRATVIGHSYGCFVLSWVLRSRPDV 382          
BLAST of mRNA_S-firma_F_contig10102.195.1 vs. uniprot
Match: A0A507E4T5_9FUNG (AB hydrolase-1 domain-containing protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507E4T5_9FUNG)

HSP 1 Score: 97.8 bits (242), Expect = 1.650e-18
Identity = 79/293 (26.96%), Postives = 124/293 (42.32%), Query Frame = 1
Query:  328 AKYPIEGKRLMHKIFKTVDWLCAQEDADTTFASFLSGWFVGADVSELRRGNVVQFLAWTMYAKEWSATGAGERRDIMDTVKVVEGKLGPGFKFRPGYNPRVTSIRHTLDPVVPFSHRPLALYAALGLCRAVVRAGLNLSGFR-RSLAPCGT-FYYWFRAPAAXXXXXXXXXXXXXXXXXXXXXXXXXXVAPMVLFHGVGTGLPFYVLALWKMCRGRVRAVGSILFAATSVIVESPSIAMSLALLRGHRPPSESQLVESVEGIMGRHGLKTAAFFGHSFGSISVAWMARRKPHV 1200
            AK P + KRL  +  + +       D D    S +SGWF GA ++ +RRGN+  +LAW M+  E       E  +I   + + E        F  G++  V  +R T+D +  F HRP   YAA+    A+    L+  GFR  S+ P G+ F      PA+                            P+V  HG+G G   Y   + ++ R                +++ P ++M LA       P+    V S+  ++ +HG   A+F  HS G+ +V+WM   KPH+
Sbjct:   96 AKSPEDRKRLYERCLEALG------DHDAVKIS-ISGWFFGAPIATIRRGNLRLWLAWAMFDSEPVDLSDSEMDEIEVFIDLTE--RASAVSFLQGHDRNVNCMRLTIDDMQMF-HRPFIYYAAISAMHAIAAIFLHAQGFRGTSVTPSGSDFINSEHEPASPQRYFYRPARASAAKKSDS-------ALPIVFIHGIGIGYLHYAPLIARLPRD-----------VDVFLLDWPHVSMRLA----ESVPTIPNTVASISAMLAKHGHPRASFVAHSLGTAAVSWMIHAKPHL 356          
BLAST of mRNA_S-firma_F_contig10102.195.1 vs. uniprot
Match: A0A7S4HWX7_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4HWX7_9EUKA)

HSP 1 Score: 95.1 bits (235), Expect = 2.020e-17
Identity = 92/313 (29.39%), Postives = 139/313 (44.41%), Query Frame = 1
Query:  385 WLCAQEDADTTFASFLSGWF----VGAD-----------------VSELRRGNVVQFLAWTMYAKEWSATGAGERRDIMDTVKVVEGKLGP---GFKFRPGYNPRVTSIRHTLDPVVPFSH---RPLALYAALG--LCRAVVRAGLNLSGFRRSLAPCGTFYYWFR---APAAXXXXXXXXXXXXXXXXXXXXXXXXXXVAP--------MVLFHGVGTG-LPFYVLALWKMCRGRVRAVGSILFAATSVIVESPSIAMSLALLRGHRPPSESQLVESVEGIMGRHGLKTAAFFGHSFGSISVAWMARRKPHV 1200
            W     D     A F++GWF    +  D                 V EL+RGN++++L+W+++ KE     A E  ++  +  ++E +L      F F  GY+  +  +R  LDP  P +H   RPL  YA     LC  +    +   GF  SL       YW++   A AA  XXXX                     AP        +V  HGVG G LP+    +  + R   +  G++L      +VE P +A  L+ L   +PP E++ V ++E  + RH L  A F GHS G+I ++W+ARR PH+
Sbjct:  171 WRRCLRDRSIGTADFITGWFYRRPLAGDWERANDGLALKSDEPVGVGELKRGNILEWLSWSLHVKEPEQLDAAEAAELEASYAMLERRLSTLRRRFTFARGYDETILCMRLNLDP--PAAHHRPRPLFYYAISDGILCGLLTPMLMRQRGF--SLHNERHLTYWYKPANATAAAAXXXXAPMAAILGGATPVTGAPGVAAAPPAPGASMPLVFVHGVGLGPLPY----MGFIDRLSAQTGGALL------VVELPFVAQRLSALP--QPPHETRTVLAIETALQRHALPAACFVGHSLGTIYLSWVARRAPHL 467          
BLAST of mRNA_S-firma_F_contig10102.195.1 vs. uniprot
Match: A0A482RZ66_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RZ66_9ARCH)

HSP 1 Score: 92.4 bits (228), Expect = 1.070e-16
Identity = 69/250 (27.60%), Postives = 107/250 (42.80%), Query Frame = 1
Query:  430 LSGWFVGADVSELRRGNVVQFLAWTMYAKEWSATGAGERRDIMDTVKVVEGKLGPGFKFRPGYNPRVTSIRHTLDPVVPFSHRPLALYAALGLCRAVVRAGLNLSGFRRSLAPCGTFYYWFRAPAAXXXXXXXXXXXXXXXXXXXXXXXXXXVAPMVLFHGVGTGLPFYVLALWKMCRGRVRAVGSILFAATSVIVESPSIAMSLALLRGHRPPSESQLVESVEGIMGRHGLKTAAFFGHSFGSISVAWM 1179
            + GWF+   + ++  GN+  + AW  + K+       E R+  + V+ +E      +KF PG+N  + S+R  LDPV   + RP   YA +     +    L L GFRR  + C      +R PAA                            P+V  HG+G G   Y+  L ++         S +F     +VE P + M +A     R P+  + V+ V   +G +G + AAF  HS GS  V+WM
Sbjct:  153 VQGWFLDQPLVKVHFGNMAAWTAWAFFGKDVRHMDLQETRENNEIVRHIEACAQ--WKFAPGFNADIPSLRLNLDPVFA-TQRPFVFYACIFFVNRIAHLLLYLQGFRREDSCCSAAQNIYRRPAASASSSGSGKL------------------PVVFVHGIGVGFAHYLYLLRQL------PGDSDVF-----LVEWPYVTMQMAT----RGPTIDEAVQGVVRTLGMYGHQQAAFVAHSLGSSLVSWM 366          
BLAST of mRNA_S-firma_F_contig10102.195.1 vs. uniprot
Match: A0A7S3PQ22_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PQ22_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 1.690e-16
Identity = 68/264 (25.76%), Postives = 122/264 (46.21%), Query Frame = 1
Query:  427 FLSGWFVGADVSELRRGNVVQFLAWTMYAKEWSATGAGERRD--IMDTVKVVEGKLGPGFKFRPGYNPRVTSIRHTLDPVVPFSHRPLALYAAL-GLCRAVVRAGLNLSGFRRSLAPCGTFYYWFRAPAAXXXXXXXXXXXXXXXXXXXXXXXXXXVAPMVLFHGVGTG-LPF--YVLALWKMCRGRVRAVGSILFAATSVIVESPSIAMSLALLRGHRPPSESQLVESVEGIMGRHGLKTAAFFGHSFGSISVAWMARRKPHV 1200
            ++ GWF+GA++ +++R N V+++AW  +  E       +  +  + + V+++E       K   GYN   T +R  LDPV+  SHRPL  Y    G+   +++A LN  GF +  +  G+  YW   P                              P+V  HG+G G LP+  ++L L K   GR              +++ P+I+M++           ++LV  +E ++   G  +A F GHSFGS+ +A++ +++  +
Sbjct:  172 YVRGWFLGAELEDIKRENAVEWIAWAFFHSEMDELKGIKHAEEQVENIVQLIEDWAK--IKLDSGYNSNTTCMRLNLDPVIS-SHRPLLYYLVTSGVFSVLLKAVLNYEGFTKHKS--GSLAYWHYKPTIALDTGSKNYP------------------PIVFCHGLGVGVLPYINFILELMKHNPGR-----------EIFLIQLPNISMTIK----EDVHGSTELVSCIELMLHTWGFDSAHFVGHSFGSVVMAYVCKKRKEI 397          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10102.195.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVU2_ECTSI1.010e-11362.07AB hydrolase-1 domain-containing protein n=2 Tax=E... [more]
W7T5P3_9STRA4.750e-3029.06Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A6U4GNQ7_9STRA9.930e-2931.76Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A0G4HL36_9ALVE1.120e-2227.36Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
W7TQ04_9STRA1.200e-2027.78Uncharacterized protein n=3 Tax=Monodopsidaceae Ta... [more]
A0A7S1MID4_ALECA1.230e-1926.15Hypothetical protein n=1 Tax=Alexandrium catenella... [more]
A0A507E4T5_9FUNG1.650e-1826.96AB hydrolase-1 domain-containing protein n=1 Tax=P... [more]
A0A7S4HWX7_9EUKA2.020e-1729.39Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]
A0A482RZ66_9ARCH1.070e-1627.60Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A7S3PQ22_9STRA1.690e-1625.76Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10102contigS-firma_F_contig10102:1933..5082 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Seed ortholog2880.D7FVU2
PFAMsAbhydrolase_1,Abhydrolase_6
Max annot lvl2759|Eukaryota
Evalue2.06e-115
EggNOG OGs28PIM@1|root,2QW6Q@2759|Eukaryota
Ec32 ortholog descriptionAlpha/Beta hydrolase fold
Ec32 orthologEc-01_002150.1
Hectar predicted targeting categorysignal anchor
Exons3
Model size1200
Cds size1026
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10102.195.1prot_S-firma_F_contig10102.195.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig10102 2107..5082 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815537.8555353-UTR-S-firma_F_contig10102:1932..21061622815537.8555353-UTR-S-firma_F_contig10102:1932..2106Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10102 1933..2106 +
1696949399.4143038-UTR-S-firma_F_contig10102:1932..21061696949399.4143038-UTR-S-firma_F_contig10102:1932..2106Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10102 1933..2106 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815537.8716133-CDS-S-firma_F_contig10102:2106..22651622815537.8716133-CDS-S-firma_F_contig10102:2106..2265Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10102 2107..2265 +
1696949399.4270842-CDS-S-firma_F_contig10102:2106..22651696949399.4270842-CDS-S-firma_F_contig10102:2106..2265Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10102 2107..2265 +
1622815537.8859887-CDS-S-firma_F_contig10102:3842..45111622815537.8859887-CDS-S-firma_F_contig10102:3842..4511Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10102 3843..4511 +
1696949399.439517-CDS-S-firma_F_contig10102:3842..45111696949399.439517-CDS-S-firma_F_contig10102:3842..4511Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10102 3843..4511 +
1622815537.896466-CDS-S-firma_F_contig10102:4884..50821622815537.896466-CDS-S-firma_F_contig10102:4884..5082Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10102 4885..5082 +
1696949399.4476502-CDS-S-firma_F_contig10102:4884..50821696949399.4476502-CDS-S-firma_F_contig10102:4884..5082Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10102 4885..5082 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig10102.195.1

>prot_S-firma_F_contig10102.195.1 ID=prot_S-firma_F_contig10102.195.1|Name=mRNA_S-firma_F_contig10102.195.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=342bp
MANGRLTPELEQDDGYAMLSWVLLAWLMAELLFLGVILVYLAPRMNQLEP
PAKYPIEGKRLMHKIFKTVDWLCAQEDADTTFASFLSGWFVGADVSELRR
GNVVQFLAWTMYAKEWSATGAGERRDIMDTVKVVEGKLGPGFKFRPGYNP
RVTSIRHTLDPVVPFSHRPLALYAALGLCRAVVRAGLNLSGFRRSLAPCG
TFYYWFRAPAAAAAAPAPSSVAKGGPGGKGKGGGGGGVAPMVLFHGVGTG
LPFYVLALWKMCRGRVRAVGSILFAATSVIVESPSIAMSLALLRGHRPPS
ESQLVESVEGIMGRHGLKTAAFFGHSFGSISVAWMARRKPHV
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mRNA from alignment at S-firma_F_contig10102:1933..5082+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig10102.195.1 ID=mRNA_S-firma_F_contig10102.195.1|Name=mRNA_S-firma_F_contig10102.195.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=3150bp|location=Sequence derived from alignment at S-firma_F_contig10102:1933..5082+ (Sphaerotrichia firma ET2_F female)
GTTTTCTTCGCTGGCTCCCTCACCTTGTTCGTTGCCCCCTCTCTACCTCG GGCTGGCTGACGGCATCTCGTCCCCTTTGCCGCTGCCGCTCAAGCCCAGG TGGAGCTGCTGCTGCTTTCGGACGCCAGCGAGAGGGCGCACTCCGCGTAG AGGGACAAAAGACAGAGCGAGGAGATGGCAAACGGTCGTCTGACTCCCGA ATTAGAGCAGGACGATGGTTACGCGATGTTGTCGTGGGTCCTGCTAGCGT GGCTTATGGCGGAGCTTTTGTTCCTCGGGGTCATCTTGGTCTACCTCGCC CCAAGGATGAACCAGCTAGAGCCCCCGGCGAAGGTGAGACCTCTTATTGT TGGTCTTCGTTCGGACCCTCTACAACAAATGTTGTACGTACAAGCCGTTT CAGTTGACATGGGTGTGTAAACGTACGCATGGTTAGAGTTCAGCAGTCAG CAGTGCCGTGCATGCGTTTTGAAAAACCGCCGCACATGACGACACCCATA TATATGTAACGGCGTGCGTGTTAGACATCCCACACGGGCAACGTGTCCAA TCTCGATGGAGGGCACAGAGACGACTCAGGGCCTCTCTGCCATGCTTACG CGTCTGCCTTTTTCGACGCTCGCCGGACCTTTCTGTCGTACATACAGCAG TAGTGCTGAGTCTAGATCCCGGTACGTGCGTGTGTTTCCTCCCCGCCCGA TCATGGACGTTGCCGGTGTATTTTGTGCCACAAAGAACAATAAACGCCTT TGGCTTCTGGGTACCTTCTCTCTGGCACGCATACGTCATGCTGGGGTGGT TGTGCGCGAGAGCATTCCCGGCGTTCAACACCCCGTTCGCCGCGTGGATT TGAATGCATTTCAACCTGCCGAATTCAACTTTAGTCAAAGACCGATGCAA GTATATGAAAACGGCCTCTACAAGAAGTACGGCGTGCTGCTCTGTTCTAC CACGAGTATTTTTTTTTATTTTTGTCTACGGATACCCCCGTGTTTACCCG ACTGGACGAGGGTCCAGTGCATTTGGTGTAGTAAACGCAGAGGTATTTTT TAAATTTTATAGAGTGACCGTGGAGGGAAGGAGGATAGGCGCGTGGGGGT GTTGCGTGTTGCGAAGACGCGCACACGCCCTTCGAAAGACTCCACTCCCA GCTGCCGAGAAAATGGTCATCGAAGGCAGCCAATGTCGCAGGTTGGCATG ACGCTCCTGCTTCACAATTGCATTTATGATAATACACAACGTCAGCAGTC TTACGACGTACCAGGGGGTGCTGTAGACTTATGCAGCATCCTTCCTCTCA CCGCCCCCGGCTACAGCAGCAGTGACACAAAATCCAACAATGTGTTTCAA GTTTTTCTGGGTTCATGAATCGTGTGTCGTCCAAAGGGGTGTGTTATCTA ACGTAGGAGTTCCAACGCATCATATGTCTGTTGATATCTTGCGTGGTAAA CTTGTACATGGCGCCAAAAAAGCGGGATCAAAACGTCTCTGCATGCACGA GTCCTTGCCCCACGAAGCCCTTGACCAAAACCCCAACCCCACTCGATGGT CTCCTACATACCATATGTGCGTTTTTTTTCCTTCTTTTTTTCTCCCATTA AGTGTTTCTGTCGACTGCCCCACTGACCCCCATCCTCCACTACGACTAGC TAGACGACCCACCCGGGGTCACACAGGAGGGGGGGGTTGGACCCCCTCCT ACTGTACAAGTACCTGCCTATGAAATTTTCATCGCGAGCAGAGTTCAGCA CTCCCCACCCTCGTCTCAACAACGACGTCGAAGTATTAATTTACTAACGC AAGCGCCTTCAATATTTTCCAGGAACGAATGTGAGAAAAAAACTCGTTGT CATATCATACGTATACAAATCCCTATCCCGCTGATCGAAAATCATGTCCC TCTCCCGCAGTACCCGATCGAGGGGAAGCGCCTCATGCACAAGATCTTCA AGACGGTCGACTGGCTGTGCGCCCAGGAGGACGCCGACACCACCTTCGCG TCCTTCCTCAGCGGCTGGTTCGTCGGGGCCGACGTCTCCGAGCTGAGGCG CGGCAACGTGGTCCAGTTCCTGGCCTGGACCATGTACGCCAAGGAGTGGT CCGCCACGGGCGCCGGCGAGCGGAGGGACATCATGGACACGGTCAAGGTG GTGGAGGGAAAGCTCGGCCCCGGGTTCAAGTTCCGCCCCGGCTACAACCC CCGAGTGACCAGCATCCGCCACACCCTCGACCCCGTGGTGCCCTTCTCGC ACCGCCCCCTGGCCCTCTACGCCGCCCTCGGCCTCTGCCGCGCCGTGGTG CGCGCGGGCCTCAACCTGTCGGGGTTCCGCCGCAGCCTCGCCCCTTGCGG GACGTTTTACTACTGGTTCCGGGCGCCGGCGGCGGCGGCGGCGGCACCTG CACCATCTTCTGTAGCGAAGGGGGGCCCGGGCGGGAAGGGGAAGGGGGGG GGGGGCGGCGGGGTCGCGCCGATGGTGCTTTTCCACGGGGTGGGGACGGG GCTGCCTTTCTACGTGCTTGCCCTCTGGAAGATGTGCCGCGGCAGGGTGA GGGCGGTTGGTTCAATTTTATTTGCAGCAGTTTGGGGGGTACTGTAGGGA CGAAGCAGGCGCCCCCGCCAAGATGGGAGGGAAGGGAGGAAGAGGAGGGG GGTCGCGGCGAGGACGCGGGGGGAGGGAGGGGGGGGGGGGGGGGCAGGGG AGAACGAGAACGAAAAACACCACTTGATTTTTGTCGATGGATTCATACAC CTATTGTAGCGCCTTTGTGTTGGGCGCAGCACTGTCGACTCCCGTGGCTT GATAGGCGCGTCCTTAAATCGACAGAAACAACAGTTATTTTAACAAGAAT CGCCAACCCCCCTTTTGCTCCCTCTTATCTCTTCTTCCCTCTCTCGTCCC CGTGTACCCACATCCACCGCCGCCCGGGCTCTCCTTTCTTGGCCGCTTGC AGACCTCGGTCATAGTCGAGTCCCCGTCCATCGCGATGAGCCTAGCCCTT CTTCGCGGGCACAGGCCTCCCTCGGAGAGCCAGCTGGTGGAGAGCGTGGA GGGCATCATGGGGAGGCACGGCCTCAAGACCGCCGCGTTCTTCGGGCACT CGTTCGGGAGCATCTCGGTGGCCTGGATGGCTAGGAGAAAGCCCCACGTG
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Coding sequence (CDS) from alignment at S-firma_F_contig10102:1933..5082+

>mRNA_S-firma_F_contig10102.195.1 ID=mRNA_S-firma_F_contig10102.195.1|Name=mRNA_S-firma_F_contig10102.195.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=2052bp|location=Sequence derived from alignment at S-firma_F_contig10102:1933..5082+ (Sphaerotrichia firma ET2_F female)
ATGGCAAACGGTCGTCTGACTCCCGAATTAGAGCAGGACGATGGTTACGC
GATGTTGTCGTGGGTCCTGCTAGCGTGGCTTATGGCGGAGCTTTTGTTCC
TCGGGGTCATCTTGGTCTACCTCGCCCCAAGGATGAACCAGCTAGAGCCC
CCGGCGAAGATGGCAAACGGTCGTCTGACTCCCGAATTAGAGCAGGACGA
TGGTTACGCGATGTTGTCGTGGGTCCTGCTAGCGTGGCTTATGGCGGAGC
TTTTGTTCCTCGGGGTCATCTTGGTCTACCTCGCCCCAAGGATGAACCAG
CTAGAGCCCCCGGCGAAGTACCCGATCGAGGGGAAGCGCCTCATGCACAA
GATCTTCAAGACGGTCGACTGGCTGTGCGCCCAGGAGGACGCCGACACCA
CCTTCGCGTCCTTCCTCAGCGGCTGGTTCGTCGGGGCCGACGTCTCCGAG
CTGAGGCGCGGCAACGTGGTCCAGTTCCTGGCCTGGACCATGTACGCCAA
GGAGTGGTCCGCCACGGGCGCCGGCGAGCGGAGGGACATCATGGACACGG
TCAAGGTGGTGGAGGGAAAGCTCGGCCCCGGGTTCAAGTTCCGCCCCGGC
TACAACCCCCGAGTGACCAGCATCCGCCACACCCTCGACCCCGTGGTGCC
CTTCTCGCACCGCCCCCTGGCCCTCTACGCCGCCCTCGGCCTCTGCCGCG
CCGTGGTGCGCGCGGGCCTCAACCTGTCGGGGTTCCGCCGCAGCCTCGCC
CCTTGCGGGACGTTTTACTACTGGTTCCGGGCGCCGGCGGCGGCGGCGGC
GGCACCTGCACCATCTTCTGTAGCGAAGGGGGGCCCGGGCGGGAAGGGGA
AGGGGGGGGGGGGCGGCGGGGTCGCGCCGATGGTGCTTTTCCACGGGGTG
GGGACGGGGCTGCCTTTCTACGTGCTTGCCCTCTGGAAGATGTGCCGCGG
CAGGGTGAGGGCGGTTGGTTCAATTTTATTTGCAGCATACCCGATCGAGG
GGAAGCGCCTCATGCACAAGATCTTCAAGACGGTCGACTGGCTGTGCGCC
CAGGAGGACGCCGACACCACCTTCGCGTCCTTCCTCAGCGGCTGGTTCGT
CGGGGCCGACGTCTCCGAGCTGAGGCGCGGCAACGTGGTCCAGTTCCTGG
CCTGGACCATGTACGCCAAGGAGTGGTCCGCCACGGGCGCCGGCGAGCGG
AGGGACATCATGGACACGGTCAAGGTGGTGGAGGGAAAGCTCGGCCCCGG
GTTCAAGTTCCGCCCCGGCTACAACCCCCGAGTGACCAGCATCCGCCACA
CCCTCGACCCCGTGGTGCCCTTCTCGCACCGCCCCCTGGCCCTCTACGCC
GCCCTCGGCCTCTGCCGCGCCGTGGTGCGCGCGGGCCTCAACCTGTCGGG
GTTCCGCCGCAGCCTCGCCCCTTGCGGGACGTTTTACTACTGGTTCCGGG
CGCCGGCGGCGGCGGCGGCGGCACCTGCACCATCTTCTGTAGCGAAGGGG
GGCCCGGGCGGGAAGGGGAAGGGGGGGGGGGGCGGCGGGGTCGCGCCGAT
GGTGCTTTTCCACGGGGTGGGGACGGGGCTGCCTTTCTACGTGCTTGCCC
TCTGGAAGATGTGCCGCGGCAGGGTGAGGGCGGTTGGTTCAATTTTATTT
GCAGCAACCTCGGTCATAGTCGAGTCCCCGTCCATCGCGATGAGCCTAGC
CCTTCTTCGCGGGCACAGGCCTCCCTCGGAGAGCCAGCTGGTGGAGAGCG
TGGAGGGCATCATGGGGAGGCACGGCCTCAAGACCGCCGCGTTCTTCGGG
CACTCGTTCGGGAGCATCTCGGTGGCCTGGATGGCTAGGAGAAAGCCCCA
CGTGACCTCGGTCATAGTCGAGTCCCCGTCCATCGCGATGAGCCTAGCCC
TTCTTCGCGGGCACAGGCCTCCCTCGGAGAGCCAGCTGGTGGAGAGCGTG
GAGGGCATCATGGGGAGGCACGGCCTCAAGACCGCCGCGTTCTTCGGGCA
CTCGTTCGGGAGCATCTCGGTGGCCTGGATGGCTAGGAGAAAGCCCCACG
TG
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