mRNA_S-firma_F_contig10102.195.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10102.195.1 vs. uniprot
Match: D7FVU2_ECTSI (AB hydrolase-1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVU2_ECTSI) HSP 1 Score: 352 bits (903), Expect = 1.010e-113 Identity = 180/290 (62.07%), Postives = 208/290 (71.72%), Query Frame = 1
Query: 334 YPIEGKRLMHKIFKTVDWLCAQEDADTTFASFLSGWFVGADVSELRRGNVVQFLAWTMYAKEWSATGAGERRDIMDTVKVVEGKLGPGFKFRPGYNPRVTSIRHTLDPVVPFSHRPLALYAALGLCRAVVRAGLNLSGFRRSLAPCGTFYYWFR-APAAXXXXXXXXXXXXXXXXXXXXXXXXXXVAPMVLFHGVGTGLPFYVLALWKMCRGRVRAVGSILFAATSVIVESPSIAMSLALLRGHRPPSESQLVESVEGIMGRHGLKTAAFFGHSFGSISVAWMARRKPHV 1200
YPI+GKRL+HK+ +TVDWL QEDADTTF SFLSGWF+GAD SEL+RGN+V FLAWT+YAK+ ER+++M +K++EG+LG + PG+N RV IRHTLD VVPFSHRPLALYA LGL RA++R L GFRR LAPCG+F YW R AP + X P+V FHGVG GLPFYVLALWKMCR R TS+IVE+PSI MSLALLRGH PPSE QLVESVEGI+ RHG+K AAFFGHSFGSISVAWMARRKPH+
Sbjct: 3 YPIDGKRLIHKVLETVDWLSEQEDADTTFESFLSGWFLGADCSELKRGNLVVFLAWTLYAKDVDMLSKAERKNVMSMIKLIEGRLGRTLE--PGFNERVKCIRHTLDRVVPFSHRPLALYAVLGLARALLRIALGFCGFRRRLAPCGSFMYWHRQAPPSAAAXAAAMPEKTEGP------------GPIVFFHGVGAGLPFYVLALWKMCRHR-----------TSIIVEAPSIMMSLALLRGHTPPSEDQLVESVEGILERHGVKRAAFFGHSFGSISVAWMARRKPHL 267
BLAST of mRNA_S-firma_F_contig10102.195.1 vs. uniprot
Match: W7T5P3_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T5P3_9STRA) HSP 1 Score: 132 bits (331), Expect = 4.750e-30 Identity = 93/320 (29.06%), Postives = 145/320 (45.31%), Query Frame = 1
Query: 238 VLLAWLMAELLFLGVILVYLAPRMNQLEPPAKYPIEGKRLMHKIFKTVDWLCAQEDADTTFASFLSGWFVGADVSELRRGNVVQFLAWTMYAKEWSATGAGERRDIMDTVKVVEGKLGPGFKFRPGYNPRVTSIRHTLDPVVPFSHRPLALYAALGLCRAVVRAGLNLSGFRRSLAPCGTFYYWFRAPAAXXXXXXXXXXXXXXXXXXXXXXXXXXVAPMVLFHGVGTGLPFYVLALWKMCRGRVRAVGSILFAATSVIVESPSIAMSLALLRGHRPPSESQLVESVEGIMGRHGLKTAAFFGHSFGSISVAWMARRKPH 1197
+L +WL+ E+ F + + P +N+L P +EG F + + +Q F F SGWF+GA + ++RRGNV + LAW +Y+K S ++ + D + + K+ GYNP+V + TLD + + HRPL YA+L + + + + L L GFRR YW+R+ PMV FHG+ GL Y+L + + RGR V++E P IAM L + +V++VE I RH + + GHSFGS+ AW+++ H
Sbjct: 34 LLSSWLLCEIAFYFYLRYIVLPELNRLTTP----VEGAHTPWDEFHKIIDVVSQLKESYAFERFFSGWFLGAPIKDIRRGNVREMLAWALYSKAQSTLTVRQKACVEDVLYWL--KMRFQIDCPEGYNPQVRPMLLTLDKIT-YMHRPLVFYASLTVIQVLGHSVLTLLGFRRH--EVNGIAYWYRSRVRDVRPGEEASL------------------PMVFFHGISPGLNLYLLVIHTLSRGR-----------KMVLMEVPHIAMCL----NFKAKRLGDMVKTVEIIAKRHRMPYFSVVGHSFGSLCAAWVSKHLKH 311
BLAST of mRNA_S-firma_F_contig10102.195.1 vs. uniprot
Match: A0A6U4GNQ7_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4GNQ7_9STRA) HSP 1 Score: 127 bits (318), Expect = 9.930e-29 Identity = 101/318 (31.76%), Postives = 143/318 (44.97%), Query Frame = 1
Query: 238 VLLAWLMAELLFLGVILVYLAPRMNQLEPPAKYPIEGKRLMHKIFKTVDWLCAQEDADTTFASFLSGWFVGADVSELRRGNVVQFLAWTMYAKEWSATGAGERRDIMD-TVKVVEGKLGPGFKFRPGYNPRVTSIRH---TLDPVVPFSHRPLALYAALGLCRAVVRAGLNLSGFRRSLAPCGTFYYWFRAPAAXXXXXXXXXXXXXXXXXXXXXXXXXXVAPMVLFHGVGTGLPFYVLALWKMCRGRVRAVGSILFAATSVIVESPSIAMSLALLRGHRPPSESQLVESVEGIMGRHGLKTAAFFGHSFGSISVAWM 1179
VL W ELLF V L +++++ P YP+ + LMH++ V L D F FLS WF+ A +L G+ F +W +YA E ++ + TV+ V G + G P+ I H TL P+ HRPL YA + L + A L ++GFRR YW R A P+V+FHG+ +G+ Y+ L + C GR T++I E P I+M+L L PPS +V +VEGI RH ++ AAF GHSFGS+ +AWM
Sbjct: 25 VLGVWFFLELLFWAAC-VQLRRKLDRINTPPPYPMPKRELMHRVLGLVKDL----GDDYPFDRFLSDWFIRAPYEKLTVGSARSFFSWALYAHREEDLSKAESAELDELTVEAVAFAKAQGKPLKEG--PKTEGIDHVDFTLRPLESV-HRPLLWYAIVALKAKLSGAILLVNGFRRF--EYDGLVYWHRDAADAGRPALDLEHPGHGRL------------PLVVFHGISSGIFLYLPMLLRYCGGR-----------TAMIFEQPHISMALDLA----PPSRDAVVAAVEGICRRHRVRRAAFLGHSFGSVPLAWM 305
BLAST of mRNA_S-firma_F_contig10102.195.1 vs. uniprot
Match: A0A0G4HL36_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HL36_9ALVE) HSP 1 Score: 110 bits (276), Expect = 1.120e-22 Identity = 90/329 (27.36%), Postives = 143/329 (43.47%), Query Frame = 1
Query: 226 MLSWVLLAWLMAELLFLGVILVYLAPRMNQLEPPAKYPIEGKRLMHKIFKTVDWLCAQEDADTT-FASFLSGWFVGADVSELRRGNVVQFLAWTMYAKEWSATGAGERRDIMDTVKVVEGKLGPGFKFRPGYNPRVTSIRHTLDPVVPFSHRPLALYAALGLCRAVVRAGLNLSGFRRSLAPCGTFYYWFRAPAAXXXXXXXXXXXXXXXXXXXXXXXXXXVAPMVLFHGVGTGLPFYVLALWKMCRGRVRAVGSILFAATSVIVESPSIAMSLALLRGH---RPPSESQLVESVEGIMGRHGLKTAAFFGHSFGSISVAWMARRKPHV 1200
+L + + W++ E+ F G+ L PP + +R+ ++ + L + D D +F+SGWF GA ++ RGN+ QFLAW+++ + +A ER ++ ++ +E G FK G+N V +IR +LD + HRPL +YA + L L+G+ L G F YW+R+ A P+V HG+G GL +Y L L RG E P + L + PS + VE+V I+ + A F GHS+GSI+V+W + KP +
Sbjct: 34 ILELLFMGWIIIEVAFYGLFRSQLRNMQWLSTPPVVLQPQRRRIFDQVLRA---LSVETDKDAKHLPTFISGWFFGAPAEKVWRGNIAQFLAWSLWYRFPAALDEEEREELEGYIRELEEIQGSQFKE--GFNHEVKAIRLSLDQLNAL-HRPLFVYAIVKGMDWAASHVLRLAGYE--LRCIGGFNYWYRSAAPGSPPRY----------------------PVVFVHGLGHGLVYY-LELLGALRG-----------------ERPLFLLELRYVSSRVWEHIPSVKRTVEAVHTILTENNFTRAIFIGHSYGSIAVSWCIKYKPEM 314
BLAST of mRNA_S-firma_F_contig10102.195.1 vs. uniprot
Match: W7TQ04_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQ04_9STRA) HSP 1 Score: 104 bits (260), Expect = 1.200e-20 Identity = 90/324 (27.78%), Postives = 144/324 (44.44%), Query Frame = 1
Query: 226 MLSWVLLAWLMAELLFLGVILVYLAPRMNQLEPPAKYPIEGKRLMHKIFKTVDWLCAQEDADTTFASFLSGWFVGADVSELRRGNVVQFLAWTMYAKEWSATGAGERRDIMDTVKVVEGKLGPGFKFRPGYNPRVTSIRHTLDPVVPFSHRPLALYAALGLC-RAVVRAGLNLSGFRRSLAPCGTFYYWFRAPAAXXXXXXXXXXXXXXXXXXXXXXXXXXVAPMVLFHGVGTGLPFYVLALWKMCRGRVRAVGSILFAATSVIVESPSIAMSLALLRGHRPPSESQLVESVEGIMGRHGLKTAAFFGHSFGSISVAWMARRKP 1194
+L +++ WL+ E LF ++++ + R++ L PP + E + + K+ VD + F +FL+ W A +SEL+RGNV QFLAW + ++ + IM V +++ + G N V ++R TL+P+ HRPL +Y + + R L L GF R L G YW+R P+V FHGV G Y + GR ++V+VE P IAMSL R +E+++ E+++ I RH ++ GHS+G+I W+ R P
Sbjct: 37 ILPFLIFCWLLCEGLFY-LVMMLVHRRLDVLTPPERSQHEPETYVRKVMDIVDSVRGVYP----FETFLTRWCGSATLSELKRGNVAQFLAWALLSQGVEDLLPRDYTMIMRMVDMIDQRYT--LNLEQGLNTDVRTLRMTLEPLEVI-HRPLCVYLGVTVIPRLFGNCVLRLQGFER-LEHQG-LVYWYRPSREWPSSARQL--------------------PLVFFHGVSPGQCAYAGLTTLLSEGR-----------SAVLVEIPHIAMSLEAFRAK---TEAEVTEAMKSICARHHIRHFTVAGHSYGTIWAGWVLRAMP 316
BLAST of mRNA_S-firma_F_contig10102.195.1 vs. uniprot
Match: A0A7S1MID4_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1MID4_ALECA) HSP 1 Score: 101 bits (251), Expect = 1.230e-19 Identity = 74/283 (26.15%), Postives = 120/283 (42.40%), Query Frame = 1
Query: 352 RLMHKIFKTVDWLCAQEDADTTFASFLSGWFVGADVSELRRGNVVQFLAWTMYAKEWSATGAGERRDIMDTVKVVEGKLGPGFKFRPGYNPRVTSIRHTLDPVVPFSHRPLALYAALGLCRAVVRAGLNLSGFRRSLAPCGTFYYWFRAPAAXXXXXXXXXXXXXXXXXXXXXXXXXXVAPMVLFHGVGTGLPFYVLALWKMCRGRVRAVGSILFAATSVIVESPSIAMSLALLRGHRPPSESQLVESVEGIMGRHGLKTAAFFGHSFGSISVAWMARRKPHV 1200
R + + + W A E T +L GWF+G+ +SE+RRGN+V+F+AW + + + ER+ ++ V+ +E + G + F+ G+N V IR D + + H PL Y +L R R + L GF P G + F P P+V FHG+G GLP Y+L + ++ R +VE P I+ + S + V ++ +G A GHS+G ++W+ R +P V
Sbjct: 130 RTLRLVEEVKSW-SAPEGPGRTPREWLEGWFLGSALSEIRRGNMVEFVAWAFWTRYEAELDESERQVALEMVEELERRFG--WSFQDGHNSAVKPIRINFDSLTVWCH-PLVYYMSLYALRVSTRHTMRLFGFTYHTGPGGMSF--FHKPLRKQPGMLVVGGEALPNKAE---------GPVVFFHGLGVGLPPYLLFIRRLAASR-----------ECFVVELPEISQ----VGTETVLSPDAMAAEVATMLQAYGHSRATVIGHSYGCFVLSWVLRSRPDV 382
BLAST of mRNA_S-firma_F_contig10102.195.1 vs. uniprot
Match: A0A507E4T5_9FUNG (AB hydrolase-1 domain-containing protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507E4T5_9FUNG) HSP 1 Score: 97.8 bits (242), Expect = 1.650e-18 Identity = 79/293 (26.96%), Postives = 124/293 (42.32%), Query Frame = 1
Query: 328 AKYPIEGKRLMHKIFKTVDWLCAQEDADTTFASFLSGWFVGADVSELRRGNVVQFLAWTMYAKEWSATGAGERRDIMDTVKVVEGKLGPGFKFRPGYNPRVTSIRHTLDPVVPFSHRPLALYAALGLCRAVVRAGLNLSGFR-RSLAPCGT-FYYWFRAPAAXXXXXXXXXXXXXXXXXXXXXXXXXXVAPMVLFHGVGTGLPFYVLALWKMCRGRVRAVGSILFAATSVIVESPSIAMSLALLRGHRPPSESQLVESVEGIMGRHGLKTAAFFGHSFGSISVAWMARRKPHV 1200
AK P + KRL + + + D D S +SGWF GA ++ +RRGN+ +LAW M+ E E +I + + E F G++ V +R T+D + F HRP YAA+ A+ L+ GFR S+ P G+ F PA+ P+V HG+G G Y + ++ R +++ P ++M LA P+ V S+ ++ +HG A+F HS G+ +V+WM KPH+
Sbjct: 96 AKSPEDRKRLYERCLEALG------DHDAVKIS-ISGWFFGAPIATIRRGNLRLWLAWAMFDSEPVDLSDSEMDEIEVFIDLTE--RASAVSFLQGHDRNVNCMRLTIDDMQMF-HRPFIYYAAISAMHAIAAIFLHAQGFRGTSVTPSGSDFINSEHEPASPQRYFYRPARASAAKKSDS-------ALPIVFIHGIGIGYLHYAPLIARLPRD-----------VDVFLLDWPHVSMRLA----ESVPTIPNTVASISAMLAKHGHPRASFVAHSLGTAAVSWMIHAKPHL 356
BLAST of mRNA_S-firma_F_contig10102.195.1 vs. uniprot
Match: A0A7S4HWX7_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4HWX7_9EUKA) HSP 1 Score: 95.1 bits (235), Expect = 2.020e-17 Identity = 92/313 (29.39%), Postives = 139/313 (44.41%), Query Frame = 1
Query: 385 WLCAQEDADTTFASFLSGWF----VGAD-----------------VSELRRGNVVQFLAWTMYAKEWSATGAGERRDIMDTVKVVEGKLGP---GFKFRPGYNPRVTSIRHTLDPVVPFSH---RPLALYAALG--LCRAVVRAGLNLSGFRRSLAPCGTFYYWFR---APAAXXXXXXXXXXXXXXXXXXXXXXXXXXVAP--------MVLFHGVGTG-LPFYVLALWKMCRGRVRAVGSILFAATSVIVESPSIAMSLALLRGHRPPSESQLVESVEGIMGRHGLKTAAFFGHSFGSISVAWMARRKPHV 1200
W D A F++GWF + D V EL+RGN++++L+W+++ KE A E ++ + ++E +L F F GY+ + +R LDP P +H RPL YA LC + + GF SL YW++ A AA XXXX AP +V HGVG G LP+ + + R + G++L +VE P +A L+ L +PP E++ V ++E + RH L A F GHS G+I ++W+ARR PH+
Sbjct: 171 WRRCLRDRSIGTADFITGWFYRRPLAGDWERANDGLALKSDEPVGVGELKRGNILEWLSWSLHVKEPEQLDAAEAAELEASYAMLERRLSTLRRRFTFARGYDETILCMRLNLDP--PAAHHRPRPLFYYAISDGILCGLLTPMLMRQRGF--SLHNERHLTYWYKPANATAAAAXXXXAPMAAILGGATPVTGAPGVAAAPPAPGASMPLVFVHGVGLGPLPY----MGFIDRLSAQTGGALL------VVELPFVAQRLSALP--QPPHETRTVLAIETALQRHALPAACFVGHSLGTIYLSWVARRAPHL 467
BLAST of mRNA_S-firma_F_contig10102.195.1 vs. uniprot
Match: A0A482RZ66_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RZ66_9ARCH) HSP 1 Score: 92.4 bits (228), Expect = 1.070e-16 Identity = 69/250 (27.60%), Postives = 107/250 (42.80%), Query Frame = 1
Query: 430 LSGWFVGADVSELRRGNVVQFLAWTMYAKEWSATGAGERRDIMDTVKVVEGKLGPGFKFRPGYNPRVTSIRHTLDPVVPFSHRPLALYAALGLCRAVVRAGLNLSGFRRSLAPCGTFYYWFRAPAAXXXXXXXXXXXXXXXXXXXXXXXXXXVAPMVLFHGVGTGLPFYVLALWKMCRGRVRAVGSILFAATSVIVESPSIAMSLALLRGHRPPSESQLVESVEGIMGRHGLKTAAFFGHSFGSISVAWM 1179
+ GWF+ + ++ GN+ + AW + K+ E R+ + V+ +E +KF PG+N + S+R LDPV + RP YA + + L L GFRR + C +R PAA P+V HG+G G Y+ L ++ S +F +VE P + M +A R P+ + V+ V +G +G + AAF HS GS V+WM
Sbjct: 153 VQGWFLDQPLVKVHFGNMAAWTAWAFFGKDVRHMDLQETRENNEIVRHIEACAQ--WKFAPGFNADIPSLRLNLDPVFA-TQRPFVFYACIFFVNRIAHLLLYLQGFRREDSCCSAAQNIYRRPAASASSSGSGKL------------------PVVFVHGIGVGFAHYLYLLRQL------PGDSDVF-----LVEWPYVTMQMAT----RGPTIDEAVQGVVRTLGMYGHQQAAFVAHSLGSSLVSWM 366
BLAST of mRNA_S-firma_F_contig10102.195.1 vs. uniprot
Match: A0A7S3PQ22_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PQ22_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 1.690e-16 Identity = 68/264 (25.76%), Postives = 122/264 (46.21%), Query Frame = 1
Query: 427 FLSGWFVGADVSELRRGNVVQFLAWTMYAKEWSATGAGERRD--IMDTVKVVEGKLGPGFKFRPGYNPRVTSIRHTLDPVVPFSHRPLALYAAL-GLCRAVVRAGLNLSGFRRSLAPCGTFYYWFRAPAAXXXXXXXXXXXXXXXXXXXXXXXXXXVAPMVLFHGVGTG-LPF--YVLALWKMCRGRVRAVGSILFAATSVIVESPSIAMSLALLRGHRPPSESQLVESVEGIMGRHGLKTAAFFGHSFGSISVAWMARRKPHV 1200
++ GWF+GA++ +++R N V+++AW + E + + + + V+++E K GYN T +R LDPV+ SHRPL Y G+ +++A LN GF + + G+ YW P P+V HG+G G LP+ ++L L K GR +++ P+I+M++ ++LV +E ++ G +A F GHSFGS+ +A++ +++ +
Sbjct: 172 YVRGWFLGAELEDIKRENAVEWIAWAFFHSEMDELKGIKHAEEQVENIVQLIEDWAK--IKLDSGYNSNTTCMRLNLDPVIS-SHRPLLYYLVTSGVFSVLLKAVLNYEGFTKHKS--GSLAYWHYKPTIALDTGSKNYP------------------PIVFCHGLGVGVLPYINFILELMKHNPGR-----------EIFLIQLPNISMTIK----EDVHGSTELVSCIELMLHTWGFDSAHFVGHSFGSVVMAYVCKKRKEI 397 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10102.195.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10102.195.1 >prot_S-firma_F_contig10102.195.1 ID=prot_S-firma_F_contig10102.195.1|Name=mRNA_S-firma_F_contig10102.195.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=342bp MANGRLTPELEQDDGYAMLSWVLLAWLMAELLFLGVILVYLAPRMNQLEPback to top mRNA from alignment at S-firma_F_contig10102:1933..5082+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10102.195.1 ID=mRNA_S-firma_F_contig10102.195.1|Name=mRNA_S-firma_F_contig10102.195.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=3150bp|location=Sequence derived from alignment at S-firma_F_contig10102:1933..5082+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10102:1933..5082+ >mRNA_S-firma_F_contig10102.195.1 ID=mRNA_S-firma_F_contig10102.195.1|Name=mRNA_S-firma_F_contig10102.195.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=2052bp|location=Sequence derived from alignment at S-firma_F_contig10102:1933..5082+ (Sphaerotrichia firma ET2_F female)back to top |