mRNA_S-firma_F_contig101.182.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig101.182.1 vs. uniprot
Match: A0A6H5KWG5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KWG5_9PHAE) HSP 1 Score: 736 bits (1899), Expect = 6.110e-256 Identity = 433/719 (60.22%), Postives = 490/719 (68.15%), Query Frame = 1
Query: 289 TVGITLVNLALFYVAVSRAR--------RESSPSTARRRSPGSRVS---------EGFVDLIRDECELRKEEEVVQPSLSRTQLAAGRLVVVIIGPSSTGVHQSYVVNKLLRYLKWSNLIRRHFRISDQDSG--VREEPSSDSTND-LTDSEESCSSDREKACPHASTAP---------GLHGSLANGNGXXXXXXXXXXXXXXXXRRGTPAGGTRPTDGYTFSDRGKAAALATIAVQESAKKVSTWLNGLKAGGVAVVETG--RSGWASTRHGREALPGFLR-QTMGPDLGILWVELLPSGLYH-------------------RTEPXXXXXXXXXXXXXXXXXXXXXXXXXSGG----------DDGKGGAWKSANGLSHDVPKTPGGNVVETFLHSGNLVGAGGRVIYESARRGTRRGKAG--GKDKGCFVSLADQGLDVQSQLEDEACPLVRRVGTFAAALRMKKSWHGCPVYLTRHGESLGNQSKSMGGDLSLSQKGDTYASVLADFVAAQPDAGQSRLLVWCSPMRRAAQTARA--VKCHRYTEWQALTELDTGIFNGCSYKEVEREHPDEFAAREMDKLCYRYPEGEGYLDVVNRLDPVVVALERVDRPVMIISHQAVLRCLYAYFHDISLREMPRVPISLHTVVKLTPIDYHPEVSAP-----------RFWKELRFELIKQTTLEHLAEVATINGG-KGRRASQLGESLS 2214
++GIT + L YVA+SRAR S S++ R+ P R +GF+DLIR+E +LR E+ +PSL+R QL GRLVVVIIGP+STGVHQSYVV KLLRYL+WSNLIRRHF ++ D G R+ SS + D LT E S S +RE C ST G +GSL NGNG +RGTPA R T GYT+SDRGKAAAL TIA QES KKV+ WLNGL AGGVAVVE R G+ R GR R +T GPD+G+LWVE+LPSGLYH R+ S G D+G GGAWKS NGL+ VPK PGGNVV+TFL SG+LVGAGG VIYES RRG R G GK K CFVSLADQGLDVQSQLED+ACPLV RVGTFA ALRMKKSWH CPVYLTRHGESLGNQ+KSMGGD +LS+ GD YA VLADFVAAQ AGQSRLLVWCSPM+RAAQTARA VKCHRYT+WQALTELDTGIFNGCSYK+VER++P+EF ARE+DKLCYRYPEGEGYLDVV+RLDPVVVALE+ DRPV+++SHQAVLRCLYAYFHDISLREMPR+PISLHTVVKLTP+DYHPE SAP RFWKELRFELIKQT L+HL E A ++GG R +SQLGE LS
Sbjct: 9 SLGITFL---LCYVALSRARGGGASRLSSRSHRSSSSRQKPRKRGGADGGSEQQCQGFLDLIRNESQLRHEQRQTKPSLTRKQLGEGRLVVVIIGPASTGVHQSYVVEKLLRYLRWSNLIRRHFLMTPDDLGSTARDVASSSAPRDNLT--ELSSSRNRENGCHTRSTGNVLDTGATPGGKNGSLTNGNGHGSGGKNGDR------KRGTPA--VRQTHGYTYSDRGKAAALETIAAQESVKKVAAWLNGLSAGGVAVVEARVRRQGY---RGGRTPPTKNQRLETAGPDVGVLWVEVLPSGLYHHGSSSCSNGGSNTGADDPLRSPTLLPHSLPLVKHTGGSGHPQTAAAHRSSGSTATEAARSTDNGVGGAWKSINGLARGVPKGPGGNVVDTFLQSGSLVGAGGHVIYESVRRGVRGGAXXXXGKGKSCFVSLADQGLDVQSQLEDKACPLVERVGTFAGALRMKKSWHECPVYLTRHGESLGNQTKSMGGDGNLSETGDRYAGVLADFVAAQLGAGQSRLLVWCSPMKRAAQTARAASVKCHRYTQWQALTELDTGIFNGCSYKQVERDYPEEFTAREVDKLCYRYPEGEGYLDVVHRLDPVVVALEKEDRPVIVVSHQAVLRCLYAYFHDISLREMPRIPISLHTVVKLTPVDYHPEASAPAAAAGAAGGGARFWKELRFELIKQTPLQHLVEAAAVSGGINSRTSSQLGERLS 711
BLAST of mRNA_S-firma_F_contig101.182.1 vs. uniprot
Match: D8LUB4_ECTSI (Fructose-2,6-bisphosphate 2-phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LUB4_ECTSI) HSP 1 Score: 197 bits (501), Expect = 1.940e-52 Identity = 101/226 (44.69%), Postives = 142/226 (62.83%), Query Frame = 1
Query: 1384 DKGCFVSLADQGLDVQSQLEDEACPLVRRVGTFAAALRMKKSWHGCPVYLTRHGESLGNQSKSMGGDLSLSQKGDTYASVLADFVAAQPDAGQSRLLVWCSPMRRAAQTARAVKCHRYTEWQALTELDTGIFNGCSYKEVEREHPDEFAAREMDKLCYRYPEGEGYLDVVNRLDPVVVALERVDRPVMIISHQAVLRCLYAYFHDISLREMPRVPISLHTVVKLTP 2061
D+G +V D G+ ++ P ++ +F L ++ G PV+++RHGES+ N +GGD LS G+ YA VL D+V + L VW S MRRA QTA + RY EW+AL E++ G+ +G +Y +V+ P+E+ ARE DKL YRYP GE YLD++ RL+PV+ +ER P++II+HQAVLRCLYAYF D+ E+P + I LHTV+KLTP
Sbjct: 159 DEGSYVKSYDGGVRIEIHNAQGFVPT--KITSFLMNLHVQ----GKPVFISRHGESMFNTQGLIGGDPPLSPLGEEYAKVLVDYVQQSEELPNDELCVWSSTMRRARQTAAEIDKSRYVEWRALREIEVGVCDGLTYAQVKASFPEEYRAREQDKLRYRYPRGESYLDIIARLEPVIFEMERQKAPLLIIAHQAVLRCLYAYFLDLPSEEIPYLSIPLHTVIKLTP 378
BLAST of mRNA_S-firma_F_contig101.182.1 vs. uniprot
Match: A0A7S2XYM4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYM4_9STRA) HSP 1 Score: 197 bits (502), Expect = 4.810e-52 Identity = 89/181 (49.17%), Postives = 133/181 (73.48%), Query Frame = 1
Query: 1519 CPVYLTRHGESLGNQSKSMGGDLSLSQKGDTYASVLADFVAAQPDAGQSRLLVWCSPMRRAAQTARAVKCHRYTEWQALTELDTGIFNGCSYKEVEREHPDEFAAREMDKLCYRYPEGEGYLDVVNRLDPVVVALERVDRPVMIISHQAVLRCLYAYFHDISLREMPRVPISLHTVVKLTP 2061
C +YL+RHGES N+ +GGD +LS++G+ YA L +F+A Q + + LLVW S MRR QTA++++C R +W+AL E++ G+ +G +Y++++ PDE+ ARE DKL YRYP GE Y+D+++RL+PV+ +ER P++I++HQAVLRCLYAYF D+ E+P + I LHTV++LTP
Sbjct: 248 CAIYLSRHGESEFNERGLIGGDSALSKEGELYAEKLTEFIAKQKELPEHDLLVWTSTMRRTRQTAKSIRCARKVQWRALREIEVGVCDGLTYEQIKELFPDEYRAREQDKLRYRYPRGESYIDLISRLEPVLFEIERNTDPLLIVAHQAVLRCLYAYFLDLPTEEIPFLSIPLHTVIRLTP 428
BLAST of mRNA_S-firma_F_contig101.182.1 vs. uniprot
Match: X6MU60_RETFI (6-phosphofructo-2-kinase/fructose-2, 6-bisphosphatase short form n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6MU60_RETFI) HSP 1 Score: 195 bits (495), Expect = 1.300e-51 Identity = 104/241 (43.15%), Postives = 150/241 (62.24%), Query Frame = 1
Query: 1381 KDKGCFVSLADQGLDVQSQLEDEACPLVRRVGTFAAALRMKKSWHGCPVYLTRHGESLGNQSKSMGGDLSLSQKGDTYASVLADFVAAQPD---AGQSRLLVWCSPMRRAAQTARAVKCH----RYTEWQALTELDTGIFNGCSYKEVEREHPDEFAAREMDKLCYRYPEGEGYLDVVNRLDPVVVALERVDRPVMIISHQAVLRCLYAYFHDISLREMPRVPISLHTVVKLTPIDYHPEV 2082
+++G F+ L D G V + P R+ F + +KK ++LTRHGES N S +GGD +LS G YA +AD++ QP+ Q + +WCS M+R QTA A K + +W+AL E+D GI G +YK++E E P+EF AR DKL YRYP+GE Y DV+ RL+PV+ LER +PV++I+H+AVLRCLY+YF ++ ++ +P + ++LHTV KL+P DY EV
Sbjct: 146 EEEGSFIKLIDAGKYVIGHMIRGYLPA--RILYFLMHIDLKKK----AIFLTRHGESEFNVSGRIGGDGALSSSGKRYAKAMADWIIMQPEFYNREQGHMHIWCSTMKRTVQTANAFKKRIPNVKIYQWRALNEIDAGICEGKTYKQIESEMPNEFTARAKDKLSYRYPQGESYKDVIQRLEPVIFELERSTQPVLVIAHRAVLRCLYSYFMELPIQSIPHLDLNLHTVYKLSPGDYKTEV 380
BLAST of mRNA_S-firma_F_contig101.182.1 vs. uniprot
Match: A0A6H5KPW9_9PHAE (6PF2K domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPW9_9PHAE) HSP 1 Score: 197 bits (501), Expect = 3.250e-51 Identity = 101/226 (44.69%), Postives = 142/226 (62.83%), Query Frame = 1
Query: 1384 DKGCFVSLADQGLDVQSQLEDEACPLVRRVGTFAAALRMKKSWHGCPVYLTRHGESLGNQSKSMGGDLSLSQKGDTYASVLADFVAAQPDAGQSRLLVWCSPMRRAAQTARAVKCHRYTEWQALTELDTGIFNGCSYKEVEREHPDEFAAREMDKLCYRYPEGEGYLDVVNRLDPVVVALERVDRPVMIISHQAVLRCLYAYFHDISLREMPRVPISLHTVVKLTP 2061
D+G +V D G+ ++ P ++ +F L ++ G PV+++RHGES+ N +GGD LS G+ YA VL D+V + L VW S MRRA QTA + RY EW+AL E++ G+ +G +Y +V+ P+E+ ARE DKL YRYP GE YLD++ RL+PV+ +ER P++II+HQAVLRCLYAYF D+ E+P + I LHTV+KLTP
Sbjct: 285 DEGSYVKSYDGGVRIEIHNAQGFVPT--KITSFLMNLHVQ----GKPVFISRHGESMFNTQGLIGGDPPLSPLGEEYAKVLVDYVKQSEELPNDELCVWSSTMRRARQTAAEIDKSRYVEWRALREIEVGVCDGLTYAQVKASFPEEYRAREQDKLRYRYPRGESYLDIIARLEPVIFEMERQKAPLLIIAHQAVLRCLYAYFLDLPSEEIPYLSIPLHTVIKLTP 504
BLAST of mRNA_S-firma_F_contig101.182.1 vs. uniprot
Match: A0A4D9D6W8_9STRA (6PF2K domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D6W8_9STRA) HSP 1 Score: 196 bits (499), Expect = 9.760e-51 Identity = 93/183 (50.82%), Postives = 128/183 (69.95%), Query Frame = 1
Query: 1522 PVYLTRHGESLGNQSKSMGGDLSLSQKGDTYASVLADFVAAQPDAGQSRLLVWCSPMRRAAQTARAVKCHRYTEWQALTELDTGIFNGCSYKEVEREHPDEFAAREMDKLCYRYPEGEGYLDVVNRLDPVVVALERVDRPVMIISHQAVLRCLYAYFHDISLREMPRVPISLHTVVKLTPIDY 2070
PVY TRHGES+ N +GGD SLS KG+ +A +L+ F+ +P+ +L VW S M+RA TA +KC RY EW++L E++ G+ +G SY ++ P E+ AREMDKL YRYP GE Y+D+++RL+ V+ LER PV+I++HQAVLRCLYAYF D+ E+P + I LHTV+K+TP Y
Sbjct: 356 PVYFTRHGESIFNIHGLIGGDSSLSPKGEKFADLLSLFIHNEPELPPDQLNVWTSTMKRARATAAKIKCARYVEWRSLREIEVGVCDGLSYDQIRDNFPQEYKAREMDKLRYRYPRGESYMDIISRLESVIFELERQQAPVVIVAHQAVLRCLYAYFLDLPPEEVPYLAIPLHTVIKVTPKAY 538
BLAST of mRNA_S-firma_F_contig101.182.1 vs. uniprot
Match: A0A7R9UEF5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UEF5_9STRA) HSP 1 Score: 189 bits (481), Expect = 1.030e-48 Identity = 98/204 (48.04%), Postives = 133/204 (65.20%), Query Frame = 1
Query: 1522 PVYLTRHGESLGNQSKSMGGDLSLSQKGDTYASVLADFVAAQPDAGQSRLLVWCSPMRRAAQTARAVK----CHRYTEWQALTELDTGIFNGCSYKEVEREHPDEFAAREMDKLCYRYPEGEGYLDVVNRLDPVVVALERVDRPVMIISHQAVLRCLYAYFHDISLREMPRVPISLHTVVKLTPIDYHPEVSAPRFWKELRFEL 2121
PVY+TRHGES+ N +GGD LS G Y+ L+DF P+ + L VW S MRRA QTA V C RY EW+AL E++ G+ +G +Y++V++E P E+AARE +KL YRYP GE YLD+++RL+PV++ ER P++I++HQAVLRCLYAYF D+ E+P + I LHTV+KL + W+E RF L
Sbjct: 300 PVYMTRHGESMFNVEHRIGGDSPLSDAGRQYSGALSDFFEKLPNVSDT-LCVWSSTMRRARQTANPVVARKLCKRYVEWRALREIEVGVCDGLTYQDVKQEFPSEYAAREENKLRYRYPRGESYLDLISRLEPVIIEFERQAEPLLIVAHQAVLRCLYAYFLDLPEEEVPYLSIPLHTVIKLENRAFG--------WREQRFTL 494
BLAST of mRNA_S-firma_F_contig101.182.1 vs. uniprot
Match: A0A7Y5KU95_9DELT (AAA family ATPase n=1 Tax=Polyangiaceae bacterium TaxID=2268199 RepID=A0A7Y5KU95_9DELT) HSP 1 Score: 183 bits (464), Expect = 3.240e-47 Identity = 113/269 (42.01%), Postives = 153/269 (56.88%), Query Frame = 1
Query: 1276 NVVETFLHSGNLVG----AGGRVIYESARRGTRRGKAGGKDKGCFVSLADQGLDVQSQLEDEACPLVRRVGTFAAALRMKKSWHGCPVYLTRHGESLGNQSKSMGGDLSLSQKGDTYASVLADFVAAQPDAGQSRLLVWCSPMRRAAQTARAVKCHRYTEWQALTELDTGIFNGCSYKEVEREHPDEFAAREMDKLCYRYPEGEGYLDVVNRLDPVVVALERVDRPVMIISHQAVLRCLYAYFHDISLREMPRVPISLHTVVKLTPIDY 2070
NV ET LHS + VG A R R + D+G +V + D+G V D ++ RV F LR K+ P++L RHGES+ N +GGD LS +G +A LA F+ Q + VW S ++R QTA+ ++ + +AL E+D GI +G +Y EV R +PDEFAAR DKL YRYP GE Y DV+ RLDPV++ +ER +RP++II HQ +LR LYAY D RE P +P+ LHTV++LTP Y
Sbjct: 139 NVRETKLHSPDYVGVEPDAAVRDFLARIAHYERAYQTVEDDEGMYVKVIDEGKKVIVHEIDG--DVLSRVVFFLMNLRTKRR----PLWLVRHGESIFNVEDRIGGDSELSPRGHAFARSLAAFM--QTRRNDEPISVWTSQLKRTIQTAQNLR-EQPVSHRALDEIDAGICDGLTYSEVRRRYPDEFAARSKDKLNYRYPRGESYGDVIQRLDPVIIEIERHERPILIIGHQGILRALYAYLMDTPPRECPHLPMPLHTVLELTPNAY 398
BLAST of mRNA_S-firma_F_contig101.182.1 vs. uniprot
Match: A0A7S1UL59_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UL59_9STRA) HSP 1 Score: 183 bits (465), Expect = 1.570e-46 Identity = 99/204 (48.53%), Postives = 133/204 (65.20%), Query Frame = 1
Query: 1522 PVYLTRHGESLGNQSKSMGGDLSLSQKGDTYASVLADFVAAQPDAGQSRLLVWCSPMRRAAQTARAV---KCH-RYTEWQALTELDTGIFNGCSYKEVEREHPDEFAAREMDKLCYRYPEGEGYLDVVNRLDPVVVALERVDRPVMIISHQAVLRCLYAYFHDISLREMPRVPISLHTVVKLTPIDYHPEVSAPRFWKELRFEL 2121
PVY+TRHGES N +GGD LS+ G YA L+DFV + + L VW S MRRA QTA V K + RY EW+AL E++ G+ +G +Y++V+ + P EFAARE +KL YRYP GE YLD+++RL+PV++ ER P++I++HQAVLRCLYAYF D+ E+P + I LHTV+KL + W+E RF L
Sbjct: 301 PVYMTRHGESEFNTEHRIGGDSPLSEAGRQYALALSDFV--EKTIPKDELCVWSSTMRRARQTANPVVERKLYWRYVEWRALREIEVGVCDGLTYQQVKEQFPSEFAAREENKLRYRYPRGESYLDLISRLEPVIIEFERQAEPLLIVAHQAVLRCLYAYFLDLPEEEVPYLSIPLHTVIKLEHRAFG--------WREQRFTL 494
BLAST of mRNA_S-firma_F_contig101.182.1 vs. uniprot
Match: X6NYI5_RETFI (Uncharacterized protein n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6NYI5_RETFI) HSP 1 Score: 181 bits (459), Expect = 2.430e-46 Identity = 99/240 (41.25%), Postives = 150/240 (62.50%), Query Frame = 1
Query: 1381 KDKGCFVSLADQGLDVQSQLEDEACPLVRRVGTFAAALRMKKSWHGCPVYLTRHGESLGNQSKSMGGDLSLSQKGDTYASVLADFVAAQPDAGQS--RLLVWCSPMRRAAQTARAVKCHRYT----EWQALTELDTGIFNGCSYKEVEREHPDEFAAREMDKLCYRYPEGEGYLDVVNRLDPVVVALERVDRPVMIISHQAVLRCLYAYFHDISLREMPRVPISLHTVVKLTPIDYHPEV 2082
+D+G F+ L D G V + P R+ F + +K+ ++LTRHGES + S +GGD L+ G TYA +A++V+ QP+ G R+ +WCS M+ A QTA VK + +W+AL +LD G+ G ++ ++++E P ++AAR DKL YR+P+GE Y DV+ RL+PVV LER +P+++I+H AVLRCLY+YF + ++ +P + ISLHT+ KL+P DY EV
Sbjct: 176 EDEGSFIKLIDAGKYVIGHMIRGYLPA--RILYFLMHINLKRK----TIFLTRHGESEFDVSGKIGGDSPLTILGKTYAEEMAEWVSKQPEFGDKDDRMRIWCSAMKPAMQTADIVKKYDSDLVIYQWKALNDLDGGVCEGKTHGDIKKEMPKDYAARVKDKLSYRFPQGESYKDVIQRLEPVVFELERSTQPILVIAHTAVLRCLYSYFMESPVQSIPNLDISLHTLYKLSPGDYKTEV 409 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig101.182.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig101.182.1 >prot_S-firma_F_contig101.182.1 ID=prot_S-firma_F_contig101.182.1|Name=mRNA_S-firma_F_contig101.182.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=650bp MHQAAAATVGITLVNLALFYVAVSRARRESSPSTARRRSPGSRVSEGFVDback to top mRNA from alignment at S-firma_F_contig101:31534..38656- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig101.182.1 ID=mRNA_S-firma_F_contig101.182.1|Name=mRNA_S-firma_F_contig101.182.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=7123bp|location=Sequence derived from alignment at S-firma_F_contig101:31534..38656- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig101:31534..38656- >mRNA_S-firma_F_contig101.182.1 ID=mRNA_S-firma_F_contig101.182.1|Name=mRNA_S-firma_F_contig101.182.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=3900bp|location=Sequence derived from alignment at S-firma_F_contig101:31534..38656- (Sphaerotrichia firma ET2_F female)back to top |