mRNA_S-firma_F_contig10096.174.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10096.174.1 vs. uniprot
Match: A0A3D2GXG9_9PROT (Uncharacterized protein n=1 Tax=Holosporales bacterium TaxID=2053559 RepID=A0A3D2GXG9_9PROT) HSP 1 Score: 90.9 bits (224), Expect = 3.600e-20 Identity = 39/88 (44.32%), Postives = 59/88 (67.05%), Query Frame = 1
Query: 22 LMSDCKAIIAMENKRLRGYVTEKIVDAFRTGAIPVYWGDMEFVESVFNPEAYFDVAKYARMEDAADALAALLTDDRALRSKQHQPVLQ 285
L+ D +IA EN+ +GYVTEKI++A++ GAIP+YWGD + V FNP+++ DV +YA E+ ADA+ AL + L+ K P+ +
Sbjct: 104 LLKDYNFVIAAENRDYKGYVTEKIINAYKVGAIPIYWGDADTVREFFNPDSFMDVTQYASFEELADAVVALTKEPAELQKKLRVPLFK 191
BLAST of mRNA_S-firma_F_contig10096.174.1 vs. uniprot
Match: A0A1F2Z6L5_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium RIFCSPHIGHO2_01_FULL_41_14 TaxID=1797217 RepID=A0A1F2Z6L5_9PROT) HSP 1 Score: 90.9 bits (224), Expect = 1.990e-19 Identity = 39/88 (44.32%), Postives = 59/88 (67.05%), Query Frame = 1
Query: 22 LMSDCKAIIAMENKRLRGYVTEKIVDAFRTGAIPVYWGDMEFVESVFNPEAYFDVAKYARMEDAADALAALLTDDRALRSKQHQPVLQ 285
L+ D +IA EN+ +GYVTEKI++A++ GAIP+YWGD + V FNP+++ DV +YA E+ ADA+ AL + L+ K P+ +
Sbjct: 236 LLKDYNFVIAAENRDYKGYVTEKIINAYKVGAIPIYWGDADTVREFFNPDSFMDVTQYASFEELADAVVALTKEPAELQKKLRVPLFK 323
BLAST of mRNA_S-firma_F_contig10096.174.1 vs. uniprot
Match: A0A2E3BZ69_9PROT (Uncharacterized protein n=1 Tax=Magnetococcales bacterium TaxID=2026759 RepID=A0A2E3BZ69_9PROT) HSP 1 Score: 77.4 bits (189), Expect = 8.660e-15 Identity = 33/89 (37.08%), Postives = 56/89 (62.92%), Query Frame = 1
Query: 19 DLMSDCKAIIAMENKRLRGYVTEKIVDAFRTGAIPVYWGDMEFVESVFNPEAYFDVAKYARMEDAADALAALLTDDRALRSKQHQPVLQ 285
D D + +IAMENK + GYVTEKI++A+ GAIP+YWG+ +V+ +FNP ++ DV+ ++ +E + + L D+ + P+ +
Sbjct: 175 DYFKDYRFVIAMENKNMNGYVTEKILNAYIAGAIPIYWGNSSYVKEIFNPLSFIDVSDFSCIEACVEYILELDKDEERRKKIASVPLFK 263
BLAST of mRNA_S-firma_F_contig10096.174.1 vs. uniprot
Match: H3H520_PHYRM (Fucosyltransferase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H520_PHYRM) HSP 1 Score: 76.3 bits (186), Expect = 1.940e-14 Identity = 39/108 (36.11%), Postives = 60/108 (55.56%), Query Frame = 1
Query: 1 YKDSWVDLMSDCKAIIAMENKRLRGYVTEKIVDAFRTGAIPVYWGDMEFVESVFNPEAYFDVAKYARMEDAADALAALLTDDRA---LRSKQHQPVLQPGGYR-FFDW 312
Y D V + K ++A EN R GYVTEK+V+AF G++PVYWGD + V +FNPE++ D ++ ++D A+ + + DD R ++ PV + F W
Sbjct: 155 YNDDAVRRYAPYKFVLAFENTRAAGYVTEKLVNAFLAGSVPVYWGDSKTVSELFNPESFIDCGRFDSLQDCAEYVVRV--DDSPEMYTRMRREAPVANMTAFNEAFSW 260
BLAST of mRNA_S-firma_F_contig10096.174.1 vs. uniprot
Match: A0A7J6QED0_PEROL (Fucosyltransferase n=2 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6QED0_PEROL) HSP 1 Score: 74.7 bits (182), Expect = 1.830e-13 Identity = 41/105 (39.05%), Postives = 62/105 (59.05%), Query Frame = 1
Query: 1 YKDSWVDLMSDCKAIIAMENKRLRGYVTEKIVDAFRTGAIPVYWGDMEFVESVFNPEAYFDVAKYARMEDAADALAAL-LTDDRALRSKQHQPVLQPGGYRFFDW 312
+ D V++ + K +IAMEN+ + GYVTEKIV+AF GAIP+Y+GD V+S+FN E++ D+A + AA+ + +L + ALR + G F W
Sbjct: 411 FYDDAVEIYTPYKFVIAMENRMVPGYVTEKIVNAFLAGAIPIYYGDSA-VDSLFNRESFIDLADFEDFRSAAEFVVSLNFNESAALRFVETSVFAGEDGLYPFSW 514
BLAST of mRNA_S-firma_F_contig10096.174.1 vs. uniprot
Match: A0A7J6MYH5_PERCH (Fucosyltransferase n=1 Tax=Perkinsus chesapeaki TaxID=330153 RepID=A0A7J6MYH5_PERCH) HSP 1 Score: 73.6 bits (179), Expect = 4.630e-13 Identity = 39/103 (37.86%), Postives = 58/103 (56.31%), Query Frame = 1
Query: 1 YKDSWVDLMSDCKAIIAMENKRLRGYVTEKIVDAFRTGAIPVYWGDMEFVESVFNPEAYFDVAKYARMEDAADALAALLTDDRALRSKQHQPVLQP--GGYRF 303
+ D V++ K +IAMEN+ GYVTEKIV+AF GAIP+Y+GD S+FNP ++ D+ + +AA + + D+ + R +PV G Y F
Sbjct: 386 FYDDAVEIYKPYKFVIAMENRVAPGYVTEKIVNAFLAGAIPIYYGDSA-ARSIFNPASFIDLDDFNDFGEAAKTVVEIALDESSARKYVEEPVFSTTNGSYPF 487
BLAST of mRNA_S-firma_F_contig10096.174.1 vs. uniprot
Match: A0A8K1CPR8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CPR8_PYTOL) HSP 1 Score: 73.2 bits (178), Expect = 6.520e-13 Identity = 33/95 (34.74%), Postives = 54/95 (56.84%), Query Frame = 1
Query: 1 YKDSWVDLMSDCKAIIAMENKRLRGYVTEKIVDAFRTGAIPVYWGDMEFVESVFNPEAYFDVAKYARMEDAADALAALLTDDRALRSKQHQPVLQ 285
Y D V S+ K +IA E ++ GYVTEK+V+AF G +P+Y+G V +FNP ++ D ++AR+ D A + + D+ + +P +Q
Sbjct: 655 YNDEGVFTFSNYKFVIAFETAQVPGYVTEKLVNAFLAGTVPIYFGHSASVSHIFNPRSFIDCGRFARLRDCAAFVLRVHRDEEIYEQFRKEPPIQ 749
BLAST of mRNA_S-firma_F_contig10096.174.1 vs. uniprot
Match: W2JNC7_PHYPR (Fucosyltransferase n=10 Tax=Phytophthora TaxID=4783 RepID=W2JNC7_PHYPR) HSP 1 Score: 72.8 bits (177), Expect = 9.010e-13 Identity = 37/106 (34.91%), Postives = 58/106 (54.72%), Query Frame = 1
Query: 1 YKDSWVDLMSDCKAIIAMENKRLRGYVTEKIVDAFRTGAIPVYWGDMEFVESVFNPEAYFDVAKYARMEDAADALAALLTDDRAL-RSKQHQPVLQPGG-YRFFDW 312
Y D V + K +IA EN R GYVTEK+V+AF G++P+Y GD + V +FNP ++ D ++ ++D A+ + + R +Q +PV Y+ F W
Sbjct: 829 YNDDAVRQYAPYKFVIAFENTRTSGYVTEKLVNAFLAGSVPIYLGDSKTVSQLFNPASFIDCGRFDDLQDCAEFVVEVDNSPELYSRMRQERPVTNMTAFYQAFSW 934
BLAST of mRNA_S-firma_F_contig10096.174.1 vs. uniprot
Match: K3X706_GLOUD (Fucosyltransferase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X706_GLOUD) HSP 1 Score: 72.4 bits (176), Expect = 1.230e-12 Identity = 33/72 (45.83%), Postives = 47/72 (65.28%), Query Frame = 1
Query: 1 YKDSWVDLMSDCKAIIAMENKRLRGYVTEKIVDAFRTGAIPVYWGDMEFVESVFNPEAYFDVAKYARMEDAA 216
Y D V L S K +IA EN + GYVTEK+V+AF G++P+Y+G E V VFNPE++ D ++A + + A
Sbjct: 838 YNDDAVRLYSQYKFVIAFENGQRPGYVTEKLVNAFLAGSVPIYFGHSESVAQVFNPESFIDCGRFAMLRECA 909
BLAST of mRNA_S-firma_F_contig10096.174.1 vs. uniprot
Match: A0A8K1C283_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C283_PYTOL) HSP 1 Score: 71.6 bits (174), Expect = 2.270e-12 Identity = 38/106 (35.85%), Postives = 59/106 (55.66%), Query Frame = 1
Query: 1 YKDSWVDLMSDCKAIIAMENKRLRGYVTEKIVDAFRTGAIPVYWGDMEFVESVFNPEAYFDVAKYARMED-AADALAALLTDDRALRSKQHQPVLQPGGYR-FFDW 312
Y D V + S+ K +IA EN R+ GY+TEKIV+A G++PVY+G V +FNPE++ D + + D AA L +D+ ++ P++ +R F W
Sbjct: 683 YNDDAVVIFSEYKFVIAFENARVPGYLTEKIVNALLAGSVPVYFGHSTTVAQLFNPESFIDCGNFPLLRDCAAYVLQVHRSDELYAAYRRAPPIVNRTAFRQHFSW 788 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10096.174.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10096.174.1 >prot_S-firma_F_contig10096.174.1 ID=prot_S-firma_F_contig10096.174.1|Name=mRNA_S-firma_F_contig10096.174.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=96bp MSDCKAIIAMENKRLRGYVTEKIVDAFRTGAIPVYWGDMEFVESVFNPEAback to top mRNA from alignment at S-firma_F_contig10096:855..1166- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10096.174.1 ID=mRNA_S-firma_F_contig10096.174.1|Name=mRNA_S-firma_F_contig10096.174.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=312bp|location=Sequence derived from alignment at S-firma_F_contig10096:855..1166- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10096:855..1166- >mRNA_S-firma_F_contig10096.174.1 ID=mRNA_S-firma_F_contig10096.174.1|Name=mRNA_S-firma_F_contig10096.174.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=576bp|location=Sequence derived from alignment at S-firma_F_contig10096:855..1166- (Sphaerotrichia firma ET2_F female)back to top |