mRNA_S-firma_F_contig10089.164.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig10089.164.1
Unique NamemRNA_S-firma_F_contig10089.164.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
[Close]
BLAST of mRNA_S-firma_F_contig10089.164.1 vs. uniprot
Match: D8LDP8_ECTSI (ARC5, dynamin-related protein involved in plastid division n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDP8_ECTSI)

HSP 1 Score: 313 bits (802), Expect = 1.210e-94
Identity = 153/160 (95.62%), Postives = 158/160 (98.75%), Query Frame = 1 
Query:    4 QTYIESENRRLERDPVRSFDSREINIRMEYRFCPNMILIDTPGLIHAPSGTNLNAEQRAVAAAAKEAENLVIQKMRCQDYVILCVEDTTDWKHATTRNVVTEVDHDLSRTVLVTTKLDTKLPQFGSGEDLEDFLRAPSIQRMYRCMLGGPFFTTVPSGRV 483
            Q YIESENRRLERDPVRSFDSREINIRMEYRFCPNMILIDTPGLIHAPSG+NLNAEQRAVAAAAKEAENLVIQKMRCQDYVILCVEDTTDWKHATTRN+VT+VDHDLSRTVLVTTKLDTKLPQFG G+DL+DFLRAPSIQRMYRCMLGGPFFTTVPSGRV
Sbjct:  191 QAYIESENRRLERDPVRSFDSREINIRMEYRFCPNMILIDTPGLIHAPSGSNLNAEQRAVAAAAKEAENLVIQKMRCQDYVILCVEDTTDWKHATTRNIVTQVDHDLSRTVLVTTKLDTKLPQFGGGDDLQDFLRAPSIQRMYRCMLGGPFFTTVPSGRV 350
[Close]
BLAST of mRNA_S-firma_F_contig10089.164.1 vs. uniprot
Match: A0A835Z9B7_9STRA (Dynamin-type G domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9B7_9STRA)

HSP 1 Score: 256 bits (655), Expect = 4.600e-74
Identity = 125/160 (78.12%), Postives = 141/160 (88.12%), Query Frame = 1 
Query:    4 QTYIESENRRLERDPVRSFDSREINIRMEYRFCPNMILIDTPGLIHAPSGTNLNAEQRAVAAAAKEAENLVIQKMRCQDYVILCVEDTTDWKHATTRNVVTEVDHDLSRTVLVTTKLDTKLPQFGSGEDLEDFLRAPSIQRMYRCMLGGPFFTTVPSGRV 483
            Q YIE+EN+RLERDP+RSFD+REI IRMEYRFCPNMILIDTPGLI AP G +LNA+Q+A+  AAKE E LVIQKMRCQD++ILCVEDTTDWKHATTRNVV +VD  L RTVLV TKLDTKLPQF SGEDLEDF+ AP ++RMY  +LGGPFFT+VPSGRV
Sbjct:  169 QAYIEAENKRLERDPIRSFDAREIMIRMEYRFCPNMILIDTPGLIQAPRGKHLNAQQQALLQAAKECEQLVIQKMRCQDFIILCVEDTTDWKHATTRNVVMQVDPSLERTVLVCTKLDTKLPQFSSGEDLEDFIDAPVMRRMYSGLLGGPFFTSVPSGRV 328
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BLAST of mRNA_S-firma_F_contig10089.164.1 vs. uniprot
Match: A0A835YPI8_9STRA (Dynamin-type G domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPI8_9STRA)

HSP 1 Score: 252 bits (644), Expect = 7.790e-73
Identity = 119/160 (74.38%), Postives = 141/160 (88.12%), Query Frame = 1 
Query:    4 QTYIESENRRLERDPVRSFDSREINIRMEYRFCPNMILIDTPGLIHAPSGTNLNAEQRAVAAAAKEAENLVIQKMRCQDYVILCVEDTTDWKHATTRNVVTEVDHDLSRTVLVTTKLDTKLPQFGSGEDLEDFLRAPSIQRMYRCMLGGPFFTTVPSGRV 483
            Q YIE+EN+RLERDP+RSFD+REI IRMEYRFCPNMILIDTPGLI AP G +LNA+Q+A+   A+E+E LV+QKMRC+DY+ILCVEDTTDWKHATTRNVV +VD  L RTVLV TKLDTK+PQF +GEDL+DF+ AP +Q+MY  +LGGPFFT+VPSGRV
Sbjct:  176 QAYIEAENKRLERDPIRSFDAREIMIRMEYRFCPNMILIDTPGLIQAPRGKHLNAQQQALLQVARESEQLVLQKMRCEDYIILCVEDTTDWKHATTRNVVMQVDPSLERTVLVCTKLDTKIPQFSTGEDLQDFIEAPLMQKMYGSLLGGPFFTSVPSGRV 335
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BLAST of mRNA_S-firma_F_contig10089.164.1 vs. uniprot
Match: A0A7R9UE33_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UE33_9STRA)

HSP 1 Score: 233 bits (593), Expect = 9.840e-72
Identity = 110/160 (68.75%), Postives = 138/160 (86.25%), Query Frame = 1 
Query:    4 QTYIESENRRLERDPVRSFDSREINIRMEYRFCPNMILIDTPGLIHAPSGTNLNAEQRAVAAAAKEAENLVIQKMRCQDYVILCVEDTTDWKHATTRNVVTEVDHDLSRTVLVTTKLDTKLPQFGSGEDLEDFLRAPSIQRMYRCMLGGPFFTTVPSGRV 483
            Q YIE+EN+RLERDPVR FDSREI +RMEY++CPNMI+IDTPGL+ +P G +L+ +QRA+  AA+EAE LV+QKM+C+DYVILCVED TDWKHA+TRN V +VD +LSRTV+VT KLDTKLPQFG+G DL+DFL+A  +++ Y  +LGGPFFT+VP GRV
Sbjct:   60 QAYIEAENQRLERDPVRCFDSREIVVRMEYKYCPNMIIIDTPGLLVSPKGRHLSPQQRALVQAAREAEALVLQKMKCKDYVILCVEDLTDWKHASTRNFVQQVDPELSRTVIVTPKLDTKLPQFGTGSDLKDFLQADLLKKFYPHLLGGPFFTSVPCGRV 219
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BLAST of mRNA_S-firma_F_contig10089.164.1 vs. uniprot
Match: A0A482SB77_9ARCH (Dynamin-type G domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SB77_9ARCH)

HSP 1 Score: 237 bits (604), Expect = 3.220e-70
Identity = 113/162 (69.75%), Postives = 136/162 (83.95%), Query Frame = 1 
Query:    4 QTYIESENRRLERDPVRSFDSREINIRMEYRFCPNMILIDTPGLIHAPSGTNLNAEQRAVAAAAKEAENLVIQKMRCQDYVILCVEDTTDWKHATTRNVVTEVDHDLSRTVLVTTKLDTKLPQFGSGEDLEDFLRAPSIQRMYRCMLGGPFFTTVPSGRVIN 489
            Q+YIE EN+RLERD  RSFDSREINIRMEY++CPNMI+IDTPG+IH P G  L  +QRA+  AA+EAE LV+ K++C DY+ILCVEDTTDWKHATTRNVV + D  L+R+VLVTTKLDTKLPQF   EDLEDFL+AP I+ ++  +LGGPF+T+VPSGRV N
Sbjct:   44 QSYIELENKRLERDATRSFDSREINIRMEYKYCPNMIVIDTPGMIHPPKGRQLTPQQRAIQHAAREAEALVLSKIKCPDYIILCVEDTTDWKHATTRNVVMQADPQLTRSVLVTTKLDTKLPQFSEPEDLEDFLKAPLIRTLFSQLLGGPFYTSVPSGRVGN 205
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BLAST of mRNA_S-firma_F_contig10089.164.1 vs. uniprot
Match: A0A7S3UW64_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UW64_HETAK)

HSP 1 Score: 238 bits (607), Expect = 5.700e-68
Identity = 112/160 (70.00%), Postives = 136/160 (85.00%), Query Frame = 1 
Query:    4 QTYIESENRRLERDPVRSFDSREINIRMEYRFCPNMILIDTPGLIHAPSGTNLNAEQRAVAAAAKEAENLVIQKMRCQDYVILCVEDTTDWKHATTRNVVTEVDHDLSRTVLVTTKLDTKLPQFGSGEDLEDFLRAPSIQRMYRCMLGGPFFTTVPSGRV 483
            Q YIE EN+RLE DP+R FD REINIRMEYRFCPNMI+IDTPGL+  P+G NLN +QRA+  A++EAE LV+ K+ C+DY+ILCVEDTTDWKHA+TRN+V +VD DL+RTV+VTTKLDTK+PQFG   DL+DFLR   ++R+Y  MLGGPFFT+VPSGRV
Sbjct:  151 QAYIEVENKRLEADPLRCFDPREINIRMEYRFCPNMIVIDTPGLLQPPTGRNLNNQQRALLQASREAEALVLDKIDCKDYIILCVEDTTDWKHASTRNIVQQVDPDLARTVIVTTKLDTKIPQFGEARDLKDFLRPQIMRRLYPAMLGGPFFTSVPSGRV 310
[Close]
BLAST of mRNA_S-firma_F_contig10089.164.1 vs. uniprot
Match: A0A4D9DCK2_9STRA (Dynamin-type G domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DCK2_9STRA)

HSP 1 Score: 232 bits (592), Expect = 2.100e-65
Identity = 112/161 (69.57%), Postives = 136/161 (84.47%), Query Frame = 1 
Query:    4 QTYIESENRRLERDPVRSFDSREINIRMEYRFCPNMILIDTPGLIHAPSGT-NLNAEQRAVAAAAKEAENLVIQKMRCQDYVILCVEDTTDWKHATTRNVVTEVDHDLSRTVLVTTKLDTKLPQFGSGEDLEDFLRAPSIQRMYRCMLGGPFFTTVPSGRV 483
            Q YIE EN+RLE D +R FD REI +R+EYRFCPNMI+IDTPGL+ AP+   ++N +QR +  AAKEAE+LV++KM+CQDY+ILCVEDTTDWKH+TTRN+V + D DL RTVLVTTK DTKLPQFG+ EDLEDFLRAP IQ++Y  MLGGPF+T+VP GRV
Sbjct:  222 QQYIEGENKRLENDELRCFDPREIMVRVEYRFCPNMIVIDTPGLLSAPAKLRHMNEQQRQLHQAAKEAEHLVLEKMKCQDYLILCVEDTTDWKHSTTRNIVMQADPDLRRTVLVTTKFDTKLPQFGTSEDLEDFLRAPLIQKLYPQMLGGPFYTSVPCGRV 382
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BLAST of mRNA_S-firma_F_contig10089.164.1 vs. uniprot
Match: A0A7S1BLX2_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BLX2_9STRA)

HSP 1 Score: 229 bits (584), Expect = 3.020e-64
Identity = 113/163 (69.33%), Postives = 133/163 (81.60%), Query Frame = 1 
Query:    4 QTYIESENRRLERDPVRSFDSREINIRMEYRFCPNMILIDTPGLIHAPSGTNL---NAEQRAVAAAAKEAENLVIQKMRCQDYVILCVEDTTDWKHATTRNVVTEVDHDLSRTVLVTTKLDTKLPQFGSGEDLEDFLRAPSIQRMYRCMLGGPFFTTVPSGRV 483
            Q YIESENRRLE+DP+R FDSREIN+RMEY++CPNMILIDTPGLI A  G+     N E RA+AA+A+E E LV+QKMRCQDY+ILCVEDT DWKH +TR +V   D DLSRTV+V TKLDTK+PQFGS +D+EDFLRA  + R+    LGGPFFT+VPSGRV
Sbjct:  237 QEYIESENRRLEQDPIRCFDSREINVRMEYKYCPNMILIDTPGLIAAQGGSGRHPNNEEARALAASAREVEKLVVQKMRCQDYLILCVEDTMDWKHGSTREIVQRADPDLSRTVVVNTKLDTKVPQFGSTDDMEDFLRAQILDRLAPHKLGGPFFTSVPSGRV 399
[Close]
BLAST of mRNA_S-firma_F_contig10089.164.1 vs. uniprot
Match: B8C5C4_THAPS (Dynamin-type G domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C5C4_THAPS)

HSP 1 Score: 221 bits (563), Expect = 1.230e-62
Identity = 109/166 (65.66%), Postives = 132/166 (79.52%), Query Frame = 1 
Query:    4 QTYIESENRRLERDPVRSFDSREINIRMEYRFCPNMILIDTPGLIHAP---SGTNLNAEQRAVAAAAKEAENLVIQKMRCQDYVILCVEDTTDWKHATTRNVVTEVDHDLSRTVLVTTKLDTKLPQFGSGEDLEDFLRAPSIQRMYRCMLGGPFFTTVPSGRVINL 492
            Q YIESEN+RLE+DPVRSFD REIN+RMEY++CPNMILIDTPGLI AP      + N +QRA+  AA+EAE LV+ KM+CQDY+ILCVEDT DWKH  TR VV + D DLSRTV+V TKLDTKLPQFG+  D+ DF+ A  ++R+    LGGPF+T+VPSGRV +L
Sbjct:   96 QEYIESENKRLEKDPVRSFDPREINVRMEYKYCPNMILIDTPGLISAPRIRKDGSANVQQRALLQAAREAERLVVSKMKCQDYIILCVEDTMDWKHGMTREVVQKADPDLSRTVIVNTKLDTKLPQFGTPTDVADFISARIVERLSPHKLGGPFYTSVPSGRVRHL 261
[Close]
BLAST of mRNA_S-firma_F_contig10089.164.1 vs. uniprot
Match: K0SNP3_THAOC (Dynamin-type G domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SNP3_THAOC)

HSP 1 Score: 223 bits (567), Expect = 4.070e-62
Identity = 113/163 (69.33%), Postives = 131/163 (80.37%), Query Frame = 1 
Query:    4 QTYIESENRRLERDPVRSFDSREINIRMEYRFCPNMILIDTPGLIHAPS---GTNLNAEQRAVAAAAKEAENLVIQKMRCQDYVILCVEDTTDWKHATTRNVVTEVDHDLSRTVLVTTKLDTKLPQFGSGEDLEDFLRAPSIQRMYRCMLGGPFFTTVPSGRV 483
            Q +IE+ENRRLE+DPVRSFDSREIN+RMEYR CPNMILIDTPGLI AP     +  NA+QRA+  AAKEAE LV+ KMRC DY+ILCVEDT DWKH TTR VV + D DLSRTV+V TKLDTKLPQFG+ +D+ DF+ A  + RM    LGGPF+T+VPSGRV
Sbjct:  431 QEHIEAENRRLEKDPVRSFDSREINVRMEYRHCPNMILIDTPGLISAPRLRRESGGNAQQRALLHAAKEAERLVVGKMRCPDYIILCVEDTMDWKHGTTREVVQKADPDLSRTVIVNTKLDTKLPQFGTPKDVADFVSATIVDRMSPHKLGGPFYTSVPSGRV 593
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10089.164.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDP8_ECTSI1.210e-9495.63ARC5, dynamin-related protein involved in plastid ... [more]
A0A835Z9B7_9STRA4.600e-7478.13Dynamin-type G domain-containing protein n=1 Tax=T... [more]
A0A835YPI8_9STRA7.790e-7374.38Dynamin-type G domain-containing protein n=1 Tax=T... [more]
A0A7R9UE33_9STRA9.840e-7268.75Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A482SB77_9ARCH3.220e-7069.75Dynamin-type G domain-containing protein (Fragment... [more]
A0A7S3UW64_HETAK5.700e-6870.00Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A4D9DCK2_9STRA2.100e-6569.57Dynamin-type G domain-containing protein n=2 Tax=M... [more]
A0A7S1BLX2_9STRA3.020e-6469.33Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
B8C5C4_THAPS1.230e-6265.66Dynamin-type G domain-containing protein (Fragment... [more]
K0SNP3_THAOC4.070e-6269.33Dynamin-type G domain-containing protein n=1 Tax=T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10089contigS-firma_F_contig10089:372..4981 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Seed ortholog2880.D8LDP8
Preferred nameARC5
PFAMsDynamin_N,WD40
Max annot lvl2759|Eukaryota
GOsGO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0006996,GO:0007031,GO:0007623,GO:0008017,GO:0008092,GO:0008150,GO:0009507,GO:0009526,GO:0009527,GO:0009536,GO:0009657,GO:0009658,GO:0009707,GO:0009941,GO:0009987,GO:0010020,GO:0015631,GO:0016020,GO:0016043,GO:0016462,GO:0016559,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0019867,GO:0031090,GO:0031967,GO:0031968,GO:0031969,GO:0031975,GO:0042170,GO:0042579,GO:0042802,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043572,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0048285,GO:0048511,GO:0071840,GO:0098588,GO:0098805
Evalue1.57e-79
EggNOG OGsCOG0699@1|root,KOG0446@2759|Eukaryota
Descriptionmitochondrial fission
COG categoryI
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionARC5, dynamin-related protein involved in plastid division
Ec32 orthologEc-19_001480.2
Exons6
Model size1030
Cds size678
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10089.164.1prot_S-firma_F_contig10089.164.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig10089 456..4173 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815534.4916747-UTR-S-firma_F_contig10089:371..4551622815534.4916747-UTR-S-firma_F_contig10089:371..455Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10089 372..455 +
1696949396.3269796-UTR-S-firma_F_contig10089:371..4551696949396.3269796-UTR-S-firma_F_contig10089:371..455Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10089 372..455 +
1622815534.5840185-UTR-S-firma_F_contig10089:4173..42281622815534.5840185-UTR-S-firma_F_contig10089:4173..4228Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10089 4174..4228 +
1696949396.4472082-UTR-S-firma_F_contig10089:4173..42281696949396.4472082-UTR-S-firma_F_contig10089:4173..4228Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10089 4174..4228 +
1622815534.5970082-UTR-S-firma_F_contig10089:4768..49811622815534.5970082-UTR-S-firma_F_contig10089:4768..4981Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10089 4769..4981 +
1696949396.4554741-UTR-S-firma_F_contig10089:4768..49811696949396.4554741-UTR-S-firma_F_contig10089:4768..4981Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10089 4769..4981 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815534.5173886-CDS-S-firma_F_contig10089:455..5601622815534.5173886-CDS-S-firma_F_contig10089:455..560Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10089 456..560 +
1696949396.3605258-CDS-S-firma_F_contig10089:455..5601696949396.3605258-CDS-S-firma_F_contig10089:455..560Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10089 456..560 +
1622815534.5314121-CDS-S-firma_F_contig10089:1014..11341622815534.5314121-CDS-S-firma_F_contig10089:1014..1134Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10089 1015..1134 +
1696949396.3769546-CDS-S-firma_F_contig10089:1014..11341696949396.3769546-CDS-S-firma_F_contig10089:1014..1134Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10089 1015..1134 +
1622815534.5462341-CDS-S-firma_F_contig10089:1428..15261622815534.5462341-CDS-S-firma_F_contig10089:1428..1526Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10089 1429..1526 +
1696949396.3957613-CDS-S-firma_F_contig10089:1428..15261696949396.3957613-CDS-S-firma_F_contig10089:1428..1526Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10089 1429..1526 +
1622815534.5567958-CDS-S-firma_F_contig10089:2567..26401622815534.5567958-CDS-S-firma_F_contig10089:2567..2640Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10089 2568..2640 +
1696949396.428099-CDS-S-firma_F_contig10089:2567..26401696949396.428099-CDS-S-firma_F_contig10089:2567..2640Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10089 2568..2640 +
1622815534.571969-CDS-S-firma_F_contig10089:3891..41731622815534.571969-CDS-S-firma_F_contig10089:3891..4173Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10089 3892..4173 +
1696949396.4388728-CDS-S-firma_F_contig10089:3891..41731696949396.4388728-CDS-S-firma_F_contig10089:3891..4173Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10089 3892..4173 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig10089.164.1

>prot_S-firma_F_contig10089.164.1 ID=prot_S-firma_F_contig10089.164.1|Name=mRNA_S-firma_F_contig10089.164.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=226bp
MEYRFCPNMILIDTPGLIHAPSGTNLNAEQRAVAAAAKEAENLVIQKMRC
QDYVILCVEDTTDWKHATTRNVVTEVDHDLSRTVLVTTKLDTKLPQFGSG
EDLEDFLRAPSIQRMYRCMLGGPFFTTVPSGRVINLAQSRVPLSSSTVES
ESRSRSNPNPNPHRRPTGASEVGRVGRSLLIWPLRSGKHVHLLISCVLYM
PSFCVSRLLNSDRGAVAGKPEGVGG*
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mRNA from alignment at S-firma_F_contig10089:372..4981+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig10089.164.1 ID=mRNA_S-firma_F_contig10089.164.1|Name=mRNA_S-firma_F_contig10089.164.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=4610bp|location=Sequence derived from alignment at S-firma_F_contig10089:372..4981+ (Sphaerotrichia firma ET2_F female)
TTTCAGACGTACATCGAGTCGGAGAACCGGCGGCTGGAGAGAGATCCCGT
GCGCTCCTTCGACTCCCGCGAGATCAACATCCGCATGGAGTACCGGTTCT
GTCCGAACATGATCCTGATCGACACGCCGGGGCTCATCCACGCCCCCTCG
GGGACCAACCTCAACGCGGAGCAGCGCGCGGTGGCGGCGGTAAGTTTGTT
TTGGTGTTTTGGGCGCTTTAGTTTCGGTTGGTGTTGGTGTTGGTGTTGTT
GTCGTTGTCGTTGTTGTTGTTTTTGTTGTCGTTGTTGTCAGTGGTGGTGT
TGGTGTTGCTGTTGTTTTGTTGCTGTTGTCGTTGTCGTTGTTGTTGTCGT
TGTCGTTGTTGTCAGTGTTGGTGTTGGTGTTGCTGTTGTTTTGTTGCTGT
TGTTGTTTTGTTGCTGTTGTTGTTGTCGTTGTTGTCGTTGTTGTCGGCTT
CCTCGTGCGCGTGTTTTGTTTGTGTTTCGACGAAATGTTATTTTAGGTTT
CTCACCCATGTTTAGTTTGTGTTTCGACGAAAGGTTATTTTAGGTTTCTC
ACCCATGTTTAGTTTGTGTTTCGACGAAAGGTTATTTTAGGTTTCTCACC
CGTGGACCGCTCTTGCTGTGGCGTTCTTTTGCTCTGTGTCCAGGCGGCGA
AGGAGGCGGAGAACCTGGTGATCCAGAAGATGCGATGCCAGGACTACGTG
ATCCTTTGCGTGGAGGACACGACGGACTGGAAGCACGCCACCACGCGAAA
CGTTGTGACAGAGGTAAAGTAAACTATCAAGTGTTGGTCGCTCGCTGTAT
CCTAGTCCTTTTTTTTTTTTTTACCCTTTCTGTTGTTGGTGTTGTTGGTG
CTCGCTTCGCTGGCGGTGTTGCAGCCGGTGGCTCCTCGGCAGTTGCTGCT
GCTGCTGATGCTGATGCTGCCGTTGTCGTCGTCGTTGTCGTCGCTTCCTC
TACGCGCCCGTTTGAGCCTCTCGGTGTGGCATCCCTCGATTGTCAAAATT
TCAAATTGCTTTTTCTTCTGTTTCGCGTCGACGCTTCTGGAACTGTTTTT
CTGGAAGGTGGACCACGACCTGTCTCGCACGGTGCTGGTCACGACCAAGC
TCGACACGAAGCTGCCGCAATTCGGATCTGGAGAGGACCTCGAAGACTTC
CTCAGGTAGGTTAGGTAACACTTGTAACACTTGGTCGTGGGATACCTCCT
CAGGTAAGTAACCCTTGGACGTGGGATACTTCCTCAGGTAGGTAACACTT
GGTCGTGGGATACTTCCTCAGGTAGGTAACACTTGGACGTGGGAGACTTC
CTCAGGAAAGTAACACTTGGTCGTGGGAGACTTCCTCAGGTAGGTAACAC
TTGGACGTGGGAGACTTCCTCAGGAAAGTAACACTTGGTCGTGGGAGACT
TCCTCAGGTAGGTAACACTTGGACGTGGGAGACTTCCTCAGGTAGGTAAC
ACTTGGTCGTGGGATACCTCCTCAGGTAGGTAACACTTGGTCGTGGGATA
CTTCCTCAGGAAAGTAACACTTGGTCGTGGGAGACTTCCTCAGGTAGGTA
ACACTTGGACGTGGGAGACTTCCTCAGGAAAGTAACACTTGGACGTGGGC
CGCCTGCGGCAACCTTGTTGTACATGAATTTAGCGTCGATCGCAGGAGAA
GGCCTCCTCCTGCTGAGCAAGGCAGACTTGCATCCTGTCTACGTGGAGTG
GTGGGCCTCGTGGGCGCCATCGTTTTGCCCGTGGAAACAGCGGTGGTTGT
GTTGTCGTTGTTTCGGGCGCTGCATGTTGGTGTTGGTGATGGTGATGGTG
TTGGTGTTGGCGTCATCGGCGCCTGATGCACCGATCTGATCTCTCTCCAG
TGTCTTCGCGCGCAGCAAGGCGTCTGTCTTCGTTGTGCATCCTCCAAGCC
CCACCCCCAGCGATTTATCGCCGAGGTTCTCCGCCCCACCCCCAAATACA
CACACACAAGCCCCTTTGCTGAACTCCCCGCGACAGACAGCCCGCCACTT
GAAAACTATCAGCAACCGCTTCATGCCTGGAAAAAACCCAAGGCAAACAG
CACGTAGTGTCAGTCCGACCTCGGTATCTACGGCGGCAGCGAGGTTAGGA
CACCGTTGCATTATCCCCCCCCCCCCCCCGCCCCCCCTTAACCACACCCA
CGTCATCACGCCTCTGCGCCCGTTCTCTCTTTGCTCGTGAATGTAGGGCG
CCTTCGATCCAGCGCATGTACCGGTGCATGCTGGGCGGGCCCTTCTTCAC
GACGGTGCCGTCTGGCAGGGTCGGCCGTGCCCGCGACNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNAGTCGTGCTGTCTTCGTCTATTTATAGCGCAAGGATCCATAGTATA
TACACACCATACCCCGGATTACATAGACTGCAAATGCTCTTGAGAGTCTA
CTTTCGTGGTAAAAAGAAAAAACTGCGGTGCTGGCTCACGTCAACACTGC
GCGAGAAAACCGCCGCAGCGGCGCTGGCCATCGCTCGTTGTAGTTGTCCG
TTGTAGCTTGTGTTAGCTTGTCTTGCCGTGCGAGAGCGGCAATCACGCAC
CTGCAGGACGCGGTGTACGTACATGTGTGAGCGCGTGTTTAAAAATTACT
TCGATGTTCCGGGGCTAAAGGTGATAAATTTAGCTCAGAGTCGCGTTCCT
CTCTCGAGTTCGACGGTGGAGTCCGAGTCGAGGTCCCGGAGCAACCCTAA
CCCTAACCCTCACCGACGGCCAACCGGGGCCTCTGAAGTAGGACGTGTCG
GTCGTTCGTTGCTGATTTGGCCCCTGCGCAGCGGTAAACACGTGCATCTC
TTAATTTCGTGTGTACTTTACATGCCGTCATTTTGTGTTTCGCGTCTGCT
TAACTCAGATCGAGGCGCTGTCGCTGGAAAGCCTGAAGGCGTCGGCGGAT
GAGTACCGCGAGCACTTCTCCAGGGCGCTCGGGCGCGCGATCCAGGGTAC
CATCAAGGTGCGTGGTGTGATGTGTCATGTGATGTCATGTGACATAGACG
AATGCCCGATCGGACATGGCTGCTTCGTCCGTCTCCTGTTGCTTTCGTTT
CATTGTTGATAAATTTTCTGCAGACGTCAGCCGTATACGTCCTTCATTGT
TGTCTCATCTCTTGGTCTCGTCTTGTTTTTGCTGCGTGTTGTGTTACCTC
CTTTGGGTCTTGGCGTGTGTTTCGTTGTTGTGTTGTTCTGCTGTCTTTTA
TCCCCACGCAAGAACCGCACCTTAGACCGCTGGTGTCGTCAAATACTATT
ACTGCTTGACGCTATGTACATTCACACAGCCTCGACAGATCGCCTTTTCT
GCAGAAAATCCAACCGAAAGCAAGCCTGCTGTTTCGCTCGAAGAGCACAA
AAAAAAAAAACACGTCGCGTGTCTTCGCTTCTTCATGCTCTCATCTCATG
CTGCTTGCTCCCTCCCTCCCTTTTTGCGGTGGCGTGCGTCCCCCAACACA
CAACGAACGCAACACGCTCAAACCAAAAAAAAAAACAAAAAAAACAGGCG
CCGCCGGAGAAGTTCGGCGAGACGCTGGAGGCGGAGCAGCTGAGGGCCGG
TTCGTTCATCGAGGACTCCGACGTGGACGCCGACCAGTGGGAGAGGATGA
TGGAGATCGAGGTCGGCAACGGGGAGAACAAGCTCTTCGGAGGGGCCCAG
TACCACCGGGCGCTCCGCGAGTTCAACTTCGCCGTCAGGCACATGAACGC
GCCGGAGGTG
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Coding sequence (CDS) from alignment at S-firma_F_contig10089:372..4981+

>mRNA_S-firma_F_contig10089.164.1 ID=mRNA_S-firma_F_contig10089.164.1|Name=mRNA_S-firma_F_contig10089.164.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1356bp|location=Sequence derived from alignment at S-firma_F_contig10089:372..4981+ (Sphaerotrichia firma ET2_F female)
ATGGAGTACCGGTTCTGTCCGAACATGATCCTGATCGACACGCCGGGGCT
CATCCACGCCCCCTCGGGGACCAACCTCAACGCGGAGCAGCGCGCGGTGG
CGGCGATGGAGTACCGGTTCTGTCCGAACATGATCCTGATCGACACGCCG
GGGCTCATCCACGCCCCCTCGGGGACCAACCTCAACGCGGAGCAGCGCGC
GGTGGCGGCGGCGGCGAAGGAGGCGGAGAACCTGGTGATCCAGAAGATGC
GATGCCAGGACTACGTGATCCTTTGCGTGGAGGACACGACGGACTGGAAG
CACGCCACCACGCGAAACGTTGTGACAGAGGCGGCGAAGGAGGCGGAGAA
CCTGGTGATCCAGAAGATGCGATGCCAGGACTACGTGATCCTTTGCGTGG
AGGACACGACGGACTGGAAGCACGCCACCACGCGAAACGTTGTGACAGAG
GTGGACCACGACCTGTCTCGCACGGTGCTGGTCACGACCAAGCTCGACAC
GAAGCTGCCGCAATTCGGATCTGGAGAGGACCTCGAAGACTTCCTCAGGT
GGACCACGACCTGTCTCGCACGGTGCTGGTCACGACCAAGCTCGACACGA
AGCTGCCGCAATTCGGATCTGGAGAGGACCTCGAAGACTTCCTCAGGGCG
CCTTCGATCCAGCGCATGTACCGGTGCATGCTGGGCGGGCCCTTCTTCAC
GACGGTGCCGTCTGGCAGGGGCGCCTTCGATCCAGCGCATGTACCGGTGC
ATGCTGGGCGGGCCCTTCTTCACGACGGTGCCGTCTGGCAGGGTGATAAA
TTTAGCTCAGAGTCGCGTTCCTCTCTCGAGTTCGACGGTGGAGTCCGAGT
CGAGGTCCCGGAGCAACCCTAACCCTAACCCTCACCGACGGCCAACCGGG
GCCTCTGAAGTAGGACGTGTCGGTCGTTCGTTGCTGATTTGGCCCCTGCG
CAGCGGTAAACACGTGCATCTCTTAATTTCGTGTGTACTTTACATGCCGT
CATTTTGTGTTTCGCGTCTGCTTAACTCAGATCGAGGCGCTGTCGCTGGA
AAGCCTGAAGGCGTCGGCGGATGAGTGATAAATTTAGCTCAGAGTCGCGT
TCCTCTCTCGAGTTCGACGGTGGAGTCCGAGTCGAGGTCCCGGAGCAACC
CTAACCCTAACCCTCACCGACGGCCAACCGGGGCCTCTGAAGTAGGACGT
GTCGGTCGTTCGTTGCTGATTTGGCCCCTGCGCAGCGGTAAACACGTGCA
TCTCTTAATTTCGTGTGTACTTTACATGCCGTCATTTTGTGTTTCGCGTC
TGCTTAACTCAGATCGAGGCGCTGTCGCTGGAAAGCCTGAAGGCGTCGGC
GGATGA
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