mRNA_S-firma_F_contig1008.157.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig1008.157.1 vs. uniprot
Match: A0A6H5KT04_9PHAE (Na_H_Exchanger domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT04_9PHAE) HSP 1 Score: 321 bits (822), Expect = 3.970e-104 Identity = 188/196 (95.92%), Postives = 191/196 (97.45%), Query Frame = 1
Query: 7 QGAKRDVLVILMANALIIPLCKRVGLSPVLGFLAAGVALGPNCLSIVSDVKAIEVLGEMGIVFFLFEMGLELSVTRLMAMKRDVFGLGLATFGVSAAAVAGVGFLAGLTGAQMVVIGGGVALSSSAFVLQLLRDRDDLGTRYGRACFGILLFQDLAVVPLLVAIPLLAGXXXXXXXXXXXAATKAAIALGLIAFIG 594
QGAKRDVLVILMANALIIP+CKRVGLSPVLGFLAAGVALGPNCLSIVSDVKAIEVLGEMGIVFFLFEMGLELSVTRLMAMKRDVFGLGLATFG+SAAAVAG +LAGLTGAQMVVIGGGVALSSSAFVLQLLRDRDDLGTRYGRACFGILLFQDLAVVPLLVAIPLLAGXXXXXXXX AATKAAIALGLIAFIG
Sbjct: 337 QGAKRDVLVILMANALIIPVCKRVGLSPVLGFLAAGVALGPNCLSIVSDVKAIEVLGEMGIVFFLFEMGLELSVTRLMAMKRDVFGLGLATFGMSAAAVAGACYLAGLTGAQMVVIGGGVALSSSAFVLQLLRDRDDLGTRYGRACFGILLFQDLAVVPLLVAIPLLAGXXXXXXXXLTSAATKAAIALGLIAFIG 532
BLAST of mRNA_S-firma_F_contig1008.157.1 vs. uniprot
Match: D8LS49_ECTSI (Similarity to sodium/hydrogen exchanger and potassium exchanger n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS49_ECTSI) HSP 1 Score: 321 bits (822), Expect = 5.770e-100 Identity = 188/196 (95.92%), Postives = 191/196 (97.45%), Query Frame = 1
Query: 7 QGAKRDVLVILMANALIIPLCKRVGLSPVLGFLAAGVALGPNCLSIVSDVKAIEVLGEMGIVFFLFEMGLELSVTRLMAMKRDVFGLGLATFGVSAAAVAGVGFLAGLTGAQMVVIGGGVALSSSAFVLQLLRDRDDLGTRYGRACFGILLFQDLAVVPLLVAIPLLAGXXXXXXXXXXXAATKAAIALGLIAFIG 594
QGAKRDVLVILMANALIIP+CKRVGLSPVLGFLAAGVALGPNCLSIVSDVKAIEVLGEMGIVFFLFEMGLELSVTRLMAMKRDVFGLGLATFGVSAAAVAG ++AGLTGAQMVVIGGGVALSSSAFVLQLLRDRDDLGTRYGRACFGILLFQDLAVVPLLVAIPLLAGXXXXXXXX AATKAAIALGLIAFIG
Sbjct: 305 QGAKRDVLVILMANALIIPVCKRVGLSPVLGFLAAGVALGPNCLSIVSDVKAIEVLGEMGIVFFLFEMGLELSVTRLMAMKRDVFGLGLATFGVSAAAVAGACYVAGLTGAQMVVIGGGVALSSSAFVLQLLRDRDDLGTRYGRACFGILLFQDLAVVPLLVAIPLLAGXXXXXXXXLTSAATKAAIALGLIAFIG 500
BLAST of mRNA_S-firma_F_contig1008.157.1 vs. uniprot
Match: A0A835Z5B4_9STRA (Sodium/hydrogen exchanger family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5B4_9STRA) HSP 1 Score: 233 bits (593), Expect = 9.330e-70 Identity = 132/192 (68.75%), Postives = 149/192 (77.60%), Query Frame = 1
Query: 40 MANALIIPLCKRVGLSPVLGFLAAGVALGPNCLSIVSDVKAIEVLGEMGIVFFLFEMGLELSVTRLMAMKRDVFGLGLATFGVSAAAVAGVGFLAGLTGAQMVVIGGGVALSSSAFVLQLLRDRDDLGTRYGRACFGILLFQDLAVVPLLVAIPLLAGXXXXXXXXXXXAATKAAIALGLIAFIGASHFEVL 615
MA AL+IPLCKR G SP+LGFLA G LGPN L +++DVKA EVLGE+GIVFFLFEMGLELS+ RL AMK+DVFGLGLA F ++A VA V AGL +VVIGGG+ALSSSAFVLQLL+DRDD+GTRYGRA FGILL QDLAVVPLLVAIPLLAG AA KA IALG IAF+G + + L
Sbjct: 1 MAVALVIPLCKRAGQSPILGFLATGTLLGPNGLRLIADVKATEVLGELGIVFFLFEMGLELSIQRLAAMKKDVFGLGLAQFFLTALGVAAVASRAGLGAPALVVIGGGIALSSSAFVLQLLKDRDDMGTRYGRASFGILLLQDLAVVPLLVAIPLLAGTGGSMAKALTSAAAKACIALGTIAFLGQNVLDRL 192
BLAST of mRNA_S-firma_F_contig1008.157.1 vs. uniprot
Match: A0A7S4VUL3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VUL3_9STRA) HSP 1 Score: 219 bits (557), Expect = 8.910e-66 Identity = 120/198 (60.61%), Postives = 146/198 (73.74%), Query Frame = 1
Query: 1 FPQGAKRDVLVILMANALIIPLCKRVGLSPVLGFLAAGVALGPNCLSIVSDVKAIEVLGEMGIVFFLFEMGLELSVTRLMAMKRDVFGLGLATFGVSAAAVAGVGFLAGLTGAQMVVIGGGVALSSSAFVLQLLRDRDDLGTRYGRACFGILLFQDLAVVPLLVAIPLLAGXXXXXXXXXXXAATKAAIALGLIAFIG 594
+ QG K D L++L+A ALI PLCK +G SP+LGFLAAG+ LGPN ++S + E L E+GIVFFLFEMG+ELS RL++MK+DVFGLGL+ F +A AV GVG GL G VV+GGG+ALSSSAFVLQLL+D+D L TR+G+A FG+LLFQDLAVVPLLV P+LAG A KAA+ALG IAF G
Sbjct: 214 YMQGPKSDTLLLLLATALITPLCKSIGTSPILGFLAAGMLLGPNGFGLISGIHTTETLAELGIVFFLFEMGIELSFDRLISMKKDVFGLGLSQFITTAIAVGGVGKFCGLPGNACVVLGGGLALSSSAFVLQLLKDKDQLATRFGKASFGVLLFQDLAVVPLLVVTPILAGGGKGLASAVGSAVVKAAMALGSIAFAG 411
BLAST of mRNA_S-firma_F_contig1008.157.1 vs. uniprot
Match: A0A7S3L4P7_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L4P7_9STRA) HSP 1 Score: 219 bits (558), Expect = 6.020e-63 Identity = 121/198 (61.11%), Postives = 147/198 (74.24%), Query Frame = 1
Query: 1 FPQGAKRDVLVILMANALIIPLCKRVGLSPVLGFLAAGVALGPNCLSIVSDVKAIEVLGEMGIVFFLFEMGLELSVTRLMAMKRDVFGLGLATFGVSAAAVAGVGFLAGLTGAQMVVIGGGVALSSSAFVLQLLRDRDDLGTRYGRACFGILLFQDLAVVPLLVAIPLLAGXXXXXXXXXXXAATKAAIALGLIAFIG 594
+ G K D L++L+A ALI P+CKR+G SP+LGFLA+G+ LGPN ++S + E L E+GIVFFLFEMG+ELSV RLM M++DVFGLGL FG++A AVAG G L GL G +VV+GGG+ALSSSAFVLQLL+D+D L TR+G+A FGILLFQDLAVVPLLV PLLAG A KA +ALG IA G
Sbjct: 226 YMTGPKSDTLLLLLATALITPICKRLGTSPILGFLASGMLLGPNGCGLISGIHTTETLAELGIVFFLFEMGIELSVERLMQMRKDVFGLGLGQFGLTALAVAGFGSLFGLPGNALVVLGGGLALSSSAFVLQLLKDKDQLATRFGKASFGILLFQDLAVVPLLVVTPLLAGSGSGLARALGAATVKAFMALGSIAVAG 423
BLAST of mRNA_S-firma_F_contig1008.157.1 vs. uniprot
Match: A0A8J9SGX4_PHATR (Hypothetical protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9SGX4_PHATR) HSP 1 Score: 211 bits (537), Expect = 2.540e-62 Identity = 116/196 (59.18%), Postives = 145/196 (73.98%), Query Frame = 1
Query: 7 QGAKRDVLVILMANALIIPLCKRVGLSPVLGFLAAGVALGPNCLSIVSDVKAIEVLGEMGIVFFLFEMGLELSVTRLMAMKRDVFGLGLATFGVSAAAVAGVGFLAGLTGAQMVVIGGGVALSSSAFVLQLLRDRDDLGTRYGRACFGILLFQDLAVVPLLVAIPLLAGXXXXXXXXXXXAATKAAIALGLIAFIG 594
G K D L++L+A ALI P+CKR+G SP+LGFLA+G+ LGPN ++S + E L E+GIVFFLFEMG+ELS RL++M++DVFGLG F ++A AVA VG LAGL +VV+GGG+ALSSSAFVLQLL+D++ L TR+G+A FGILLFQDLAVVPLLV P+LAG A KAA+ALG IA G
Sbjct: 2 SGPKSDTLLLLLATALITPVCKRLGTSPILGFLASGMLLGPNGCGLISGIHTTETLAELGIVFFLFEMGIELSFDRLLSMRKDVFGLGFLQFSITAVAVALVGKLAGLPANALVVLGGGLALSSSAFVLQLLKDKNQLATRFGKAAFGILLFQDLAVVPLLVVTPILAGSGQGLASAVGSAVVKAAMALGSIAVAG 197
BLAST of mRNA_S-firma_F_contig1008.157.1 vs. uniprot
Match: A0A1E7FVM6_9STRA (Na_H_Exchanger-domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FVM6_9STRA) HSP 1 Score: 211 bits (537), Expect = 6.280e-62 Identity = 118/198 (59.60%), Postives = 144/198 (72.73%), Query Frame = 1
Query: 1 FPQGAKRDVLVILMANALIIPLCKRVGLSPVLGFLAAGVALGPNCLSIVSDVKAIEVLGEMGIVFFLFEMGLELSVTRLMAMKRDVFGLGLATFGVSAAAVAGVGFLAGLTGAQMVVIGGGVALSSSAFVLQLLRDRDDLGTRYGRACFGILLFQDLAVVPLLVAIPLLAGXXXXXXXXXXXAATKAAIALGLIAFIG 594
F +G K D L +L+A ALI PLC+ VG SP+LGFLA+G+ LGPN ++ + A E L E+GIVFFLFEMGLELSV RL++MKRDVFGLGL+ F SA A+AGVG + L +VVIGGG+ALSSSAFVLQLL+D++ + TR+G+A FG+LLFQDLAVVPLLV P+LAG A KA IALG I G
Sbjct: 11 FMKGPKSDTLWLLLATALITPLCQMVGASPILGFLASGMLLGPNGFGLIGGIHATETLAELGIVFFLFEMGLELSVARLLSMKRDVFGLGLSQFLCSALAIAGVGKILKLPANALVVIGGGLALSSSAFVLQLLKDKNQMATRFGKASFGVLLFQDLAVVPLLVVTPILAGGGSGLAAALGSAVLKAGIALGAITLAG 208
BLAST of mRNA_S-firma_F_contig1008.157.1 vs. uniprot
Match: A0A7S2XSK7_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XSK7_9STRA) HSP 1 Score: 216 bits (551), Expect = 8.460e-62 Identity = 117/198 (59.09%), Postives = 148/198 (74.75%), Query Frame = 1
Query: 1 FPQGAKRDVLVILMANALIIPLCKRVGLSPVLGFLAAGVALGPNCLSIVSDVKAIEVLGEMGIVFFLFEMGLELSVTRLMAMKRDVFGLGLATFGVSAAAVAGVGFLAGLTGAQMVVIGGGVALSSSAFVLQLLRDRDDLGTRYGRACFGILLFQDLAVVPLLVAIPLLAGXXXXXXXXXXXAATKAAIALGLIAFIG 594
F +G K D L++L+A ALI PLC+R+G SP+LGFLA+G+ LGPN ++S + E L E+GIVFFLFEMG+ELS RL +MK+DVFGLG++ F +A A+AGVG L GL +VV+GGG+ALSSSAFVLQLL+D+D L TR+G+A FG+LLFQDLAVVPLLV P+LAG A KA +ALG IAF+G
Sbjct: 300 FMKGPKSDTLLLLLATALITPLCQRLGTSPILGFLASGMLLGPNGFGLISGIHTTETLAELGIVFFLFEMGIELSFDRLKSMKKDVFGLGMSQFVCTALAIAGVGSLFGLPANALVVLGGGLALSSSAFVLQLLKDKDKLATRFGKASFGVLLFQDLAVVPLLVVTPILAGGGSGMAIAIFSAVVKAGLALGSIAFLG 497
BLAST of mRNA_S-firma_F_contig1008.157.1 vs. uniprot
Match: A0A7S2MX89_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MX89_9STRA) HSP 1 Score: 204 bits (518), Expect = 7.530e-61 Identity = 110/187 (58.82%), Postives = 137/187 (73.26%), Query Frame = 1
Query: 1 FPQGAKRDVLVILMANALIIPLCKRVGLSPVLGFLAAGVALGPNCLSIVSDVKAIEVLGEMGIVFFLFEMGLELSVTRLMAMKRDVFGLGLATFGVSAAAVAGVGFLAGLTGAQMVVIGGGVALSSSAFVLQLLRDRDDLGTRYGRACFGILLFQDLAVVPLLVAIPLLAGXXXXXXXXXXXAATKA 561
+ +G K D L++L+A ALI PLCK +G SP+LGFLAAG+ LGPN ++S + E L E+GIVFFLFEMG+ELS RL++MK+DVFGLGL+ F +A + GVG L GL G VV+GGG+ALSSSAFVLQLL+D+D L TR+G+A FG+LLFQDLAVVPLLV P+LAG A KA
Sbjct: 211 YMEGPKSDTLLLLLATALITPLCKSIGTSPILGFLAAGMLLGPNGFGLISGIHTTETLAELGIVFFLFEMGIELSFNRLLSMKKDVFGLGLSQFLTTAITIGGVGRLCGLPGNAGVVLGGGLALSSSAFVLQLLKDKDQLATRFGKASFGVLLFQDLAVVPLLVVTPILAGGGAGLASAVGSAVVKA 397
BLAST of mRNA_S-firma_F_contig1008.157.1 vs. uniprot
Match: A0A7S2A6S9_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A6S9_TRICV) HSP 1 Score: 199 bits (507), Expect = 9.420e-61 Identity = 109/172 (63.37%), Postives = 134/172 (77.91%), Query Frame = 1
Query: 1 FPQGAKRDVLVILMANALIIPLCKRVGLSPVLGFLAAGVALGPNCLSIVSDVKAIEVLGEMGIVFFLFEMGLELSVTRLMAMKRDVFGLGLATFGVSAAAVAGVGFLA-GLTGAQMVVIGGGVALSSSAFVLQLLRDRDDLGTRYGRACFGILLFQDLAVVPLLVAIPLLAG 513
+ G K D L++L+A AL+ PLCK +G SP+LGFLAAG LGPN L +S + E L E+GIVFFLFEMG+ELS RL++MK+DVFGLGL+ F +A AVA VG +A GL +VV+GGG+ALSSSAFVLQLL+D+D L TR+GRA FG+LLFQDLAVVPLLV P+LAG
Sbjct: 98 YMSGPKSDTLLLLLATALVTPLCKSLGTSPILGFLAAGTILGPNALGWISGIHTTETLAELGIVFFLFEMGIELSFERLLSMKKDVFGLGLSQFLTTAVAVAAVGRVAFGLPANALVVLGGGLALSSSAFVLQLLKDKDQLATRFGRASFGVLLFQDLAVVPLLVVTPILAG 269 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1008.157.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig1008.157.1 >prot_S-firma_F_contig1008.157.1 ID=prot_S-firma_F_contig1008.157.1|Name=mRNA_S-firma_F_contig1008.157.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=206bp FPQGAKRDVLVILMANALIIPLCKRVGLSPVLGFLAAGVALGPNCLSIVSback to top mRNA from alignment at S-firma_F_contig1008:24844..26332+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig1008.157.1 ID=mRNA_S-firma_F_contig1008.157.1|Name=mRNA_S-firma_F_contig1008.157.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=1489bp|location=Sequence derived from alignment at S-firma_F_contig1008:24844..26332+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig1008:24844..26332+ >mRNA_S-firma_F_contig1008.157.1 ID=mRNA_S-firma_F_contig1008.157.1|Name=mRNA_S-firma_F_contig1008.157.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1236bp|location=Sequence derived from alignment at S-firma_F_contig1008:24844..26332+ (Sphaerotrichia firma ET2_F female)back to top |