mRNA_S-firma_F_contig10065.135.1 (mRNA) Sphaerotrichia firma ET2_F female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10065.135.1 vs. uniprot
Match: D7G5C1_ECTSI (Sulfhydryl oxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5C1_ECTSI) HSP 1 Score: 299 bits (766), Expect = 1.040e-92 Identity = 144/212 (67.92%), Postives = 163/212 (76.89%), Query Frame = 2 Query: 362 GAPCSLRIEDAATSVRFFLRHEVFTQGVKLDRDRRAGALISFLDLLATSFPGKRNRASFRSLAADLKRDNGMNDIARWDKRIRNLAIGHFPASEEDNWPAANIETKSDGNVVHYMSGLWSLFHALSVSSAPQRQSPHEMMEGVHSFVYTFFRCEYCRAHFLEMYENCDNGRCAIPKASNMRGGQTSTAEPALALWVWRMHNAVNTANALEAD 997
GAPC LRIEDAA SVRF LR+EVFTQG LD +R GAL+SFL+LLAT+FPGK NR SFRSLA DL+RD +NDIARWDKRI N IG F + DNWPAANIE ++ V HY SGLWSLFH LSVS AP +Q+P+ +MEG+ SFV FFRCE CR+HF+EMY CDNGRC IPK +N+RG TS EPALALWVWR HN VN ALE D
Sbjct: 139 GAPCILRIEDAAVSVRFVLRNEVFTQGTSLDEERM-GALLSFLELLATTFPGKMNRVSFRSLATDLRRDPSLNDIARWDKRIGNFHIGSFAPGKRDNWPAANIERGTEPEVSHYTSGLWSLFHLLSVSEAPMKQNPYAVMEGIASFVDNFFRCEVCRSHFMEMYSTCDNGRCDIPKPANVRGQHTSQGEPALALWVWRAHNTVNGRLALEGD 349
BLAST of mRNA_S-firma_F_contig10065.135.1 vs. uniprot
Match: A0A7S2WSV1_9STRA (Sulfhydryl oxidase (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WSV1_9STRA) HSP 1 Score: 122 bits (305), Expect = 2.170e-26 Identity = 79/215 (36.74%), Postives = 106/215 (49.30%), Query Frame = 2 Query: 368 PCSLRIEDAATSVRFFLRHEVFTQGVKLDRDRRAGALISFLDLLATSFPGKR-NRASFRSLAADLKRDNGMNDIARWDKRIRNLAIGHFPASEEDNW-----PAANIETKSDGNVVHYMSGLWSLFHALSVSSAPQRQSPHEMMEGVHSFVYTFFRCEYCRAHFLEMYENCDNGRCAIPKASNMRGGQTSTAEPALALWVWRMHNAVNTANALEA 994
P R+ DAATS+RF L++ VF G LD R AL+ L L+ FPG R NR S L + G +WD + + G F S + W P A+ S Y GLW+LFH L+ S SP M V +V FF C +CR HFL+M++ C GRC I ++ ++ ALALW+WR HN VN+ A+E+
Sbjct: 192 PPQRRLLDAATSLRFGLQYGVFVDGATLDASRLK-ALLDLLQDLSQMFPGSRVNRDSLGVLHDQVADGKGQLSSEQWDDLLGRWSFGKF--SGDFAWSTMCNPRADEVDGSPHVTAGYTCGLWTLFHMLTFSGPRAGLSPGRTMATVRGYVDHFFGCSHCRQHFLQMFDECWGGRCDIGD------DRSEESQRALALWLWRAHNTVNSRVAVES 397
BLAST of mRNA_S-firma_F_contig10065.135.1 vs. uniprot
Match: A0A835ZH80_9STRA (Sulfhydryl oxidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH80_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 1.400e-17 Identity = 56/123 (45.53%), Postives = 66/123 (53.66%), Query Frame = 2 Query: 653 WPAANIETKSD-GNVVHYMSGLWSLFHALSVSSAPQRQSPHEMMEGVHSFVYTFFRCEYCRAHFLEMYENCDNGRCAIPKASNMRGGQTSTAEPALALWVWRMHNAVNT--ANALEADPPEEP 1012
WPAA ET D ++V+Y SGLWSLFH L++S A E + +FV FF C CRAHFL + CD G CA+ S ALALW+WRMHNAVN A A PP P
Sbjct: 3 WPAAAHETGRDLHSLVNYSSGLWSLFHVLTLSPARGAARAQETQAAIRTFVDRFFGCAPCRAHFLGAVDACDAGACAV-----------SAGPRALALWLWRMHNAVNVRVAQRRGAPPPLRP 114
BLAST of mRNA_S-firma_F_contig10065.135.1 vs. uniprot
Match: A0A6A4A894_9STRA (Sulfhydryl oxidase n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4A894_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 1.620e-15 Identity = 62/209 (29.67%), Postives = 95/209 (45.45%), Query Frame = 2 Query: 380 RIEDAATSVRFFLRHEVFTQGVKLDRDRRAGALISFLDLLATSFPGKRNRASFRSLAADLKRDNGMND------IARWDKRIRNLAI--GHFPASEEDNWPAANIETKSDGNVVHYMSGLWSLFHALSVSSAPQRQS--PHEMMEGVHSFVYTFFRCEYCRAHFLEMYENCDNGRCAIPKASNMRGGQTST-AEPALALWVWRMHNAVN 973
R+ DA + + + LD +R A +++++ LA SFP + NR + SLAA +K+ N + W K + F +SE+ NW Y G+W+LFH LSVS + P E+M + FV FF CE C+ HF+ A P++ + Q+ PA+A+W+W+MHN VN
Sbjct: 200 RLHDAGIAAVSTFENGFYVGTTVLDGERYEAA-VTWVEALAASFPMQGNREALISLAAAIKKQNTWPQSDWNAMLTEWKKNATETSFPANLFESSEKKNWAYCTT----------YTCGVWTLFHTLSVSEIQSEAALKPSEIMAAIRLFVKHFFSCEECQRHFM----------MANPESLLEKLAQSDVEGPPAVAIWIWKMHNKVN 387
BLAST of mRNA_S-firma_F_contig10065.135.1 vs. uniprot
Match: K0RRS9_THAOC (Sulfhydryl oxidase (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RRS9_THAOC) HSP 1 Score: 76.6 bits (187), Expect = 4.100e-11 Identity = 39/131 (29.77%), Postives = 64/131 (48.85%), Query Frame = 2 Query: 635 ASEEDNWPAANIETKSDGNVVHYMSGLWSLFHALSVSSAPQRQ-----------SPHEMMEGVHSFVYTFFRCEYCRAHFLEMYENCDNGRCAIPKASNMRGGQTSTAEPALALWVWRMHNAVNTANALEA 994
A ++ +W A ++ + GLW+LFH L++ ++ + S H + E + +F+ FF C+ CR +FL MY+ C +G C K + + LALW+W +HN+VNT EA
Sbjct: 367 AKDDKHWSKACTHSQPAKG---FTCGLWNLFHILTIGASKKDHEMYGFHRGFLVSQHHVAETIKNFIAYFFSCDVCRTNFLNMYDGCGHGHCDRLKQEVLSVAGNDSDRMELALWLWEVHNSVNTRLMKEA 494
BLAST of mRNA_S-firma_F_contig10065.135.1 vs. uniprot
Match: W7T3Q1_9STRA (Sulfhydryl oxidase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7T3Q1_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 8.010e-11 Identity = 66/231 (28.57%), Postives = 92/231 (39.83%), Query Frame = 2 Query: 380 RIEDAATSVRFFLRHEVFTQGVKLDRDRRAGALISFLDLLATSFPGKRNRASFRSLAADLKRDNGMNDIARWDKRI-RNL-----------AIGHFPASEEDNWPAANIETKSDGNVVHYMSGLWSLFHALSVSSAPQRQ-----------SPHEMMEGVHSFVYTFFRCEYCRAHFLEMYENCDNGRCAIPKASNMRGGQTSTAEPALALWVWRMHNAVNTANALEADPP 1003
R+EDA TS+RF L H++F G K+ R + +L L +L+ FPG R FR L + + IA W+ + R+L G + E G Y GLW+LFH LSV SA + + SP ++ + FV FF C+ CR HFL +E RG WV+ +H+ VN PP
Sbjct: 302 RVEDAFTSLRFALDHDLFL-GSKVLRGQALSSLRDLLHVLSLLFPGGPRRRLFRGLLEAVYPLKEIG-IAEWEDLLARHLDPVLPSLHAASRAGGXXXXXXXRASKRSYEWAVCGREAGYTCGLWTLFHLLSVKSAVRARDKAASSSTSVVSPLNVLLVIEGFVSNFFGCQECRDHFLNAFEET-------------RGRWADRGPKGAVWWVYDLHDKVNVRLGKRRWPP 517
BLAST of mRNA_S-firma_F_contig10065.135.1 vs. uniprot
Match: K0TNB5_THAOC (Sulfhydryl oxidase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TNB5_THAOC) HSP 1 Score: 66.6 bits (161), Expect = 3.980e-8 Identity = 57/205 (27.80%), Postives = 90/205 (43.90%), Query Frame = 2 Query: 389 DAATSVRFFLRHEVFTQGVKLDRDRRAGALISFLDLLATSFPGKRNRASFRSLAADLKRDNGMNDIARWDKRIRNLAIGHFPASEEDNWPAANIETKSDGNVVHYMSGLWSLFHALSVS---------SAPQRQSPHEMMEGVHSFVYTFFRCEYCRAHFLEMYENCDNGRCAIPKASNMRGGQTSTAEPALALWVWRMHNAVNT 976
DAA S LR ++F++G LD D R ++DLL S P +L DL+ N ++ + + + + H + + +K Y GLWSLFH +S+ A ++ S + + ++V FF CE CR +F+ M+++C C K + S E ALW+W +HN VNT
Sbjct: 84 DAALSFTHALRTDIFSRG-PLD-DLRREVFSDWVDLLYWSLPPTY---ILHTLINDLR--NNIDSVMVSEDNMNFMVDKHSDVINGIHTKWSEQCSKGIAGA-GYSCGLWSLFHIVSIGVIERHRAVLGAREQVSTSFVATTLRNYVDNFFDCESCREYFVSMFDSCGFNHCRRFKQTKKLPPPQSWDE--FALWLWEVHNDVNT 278
BLAST of mRNA_S-firma_F_contig10065.135.1 vs. uniprot
Match: T0R611_SAPDV (Sulfhydryl oxidase n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0R611_SAPDV) HSP 1 Score: 62.8 bits (151), Expect = 7.510e-7 Identity = 58/203 (28.57%), Postives = 84/203 (41.38%), Query Frame = 2 Query: 380 RIEDAATSVRFFLRHEVFTQGVKLDRDRRAGALISFLDLLATSFPGKRNRASFRSLAADLKRDNGMNDIARWDKRIRNLAIGHFPASEEDNWPAANIETKSDGNV----VHYMSGLWSLFHALSVSSAPQRQSPHEMMEGVHSFVYTFFRCEYCRAHFLEMYENCDNGRCAIPKASNMRGGQTSTAEPALALWVWRMHNAVNT 976
R DA + F L H VF Q L R AL ++ L+A + +R + L A L+R + + W + + + AS +D DG+ Y GLW L H +S+S AP R P + F+ F C CRA FLE Y + + PA+AL +WR+HNA+N+
Sbjct: 161 RSHDAVAAFLFGLHHHVFYQRATL-RPALLAALCEWIHLVADAMTHGSHRRAVLRLHAALRRKTTL-EADEWQQ-----LLAQWAASTDD------ALFHGDGSTYLACTSYNCGLWMLLHRMSLSPAPTRLVPTLQL-----FMQHFGHCPPCRA-FLETYHSIETLEIL-----------QHAPRPAIALHMWRLHNAINS 333
BLAST of mRNA_S-firma_F_contig10065.135.1 vs. uniprot
Match: A0A7E4VGU2_PANRE (Sulfhydryl oxidase n=1 Tax=Panagrellus redivivus TaxID=6233 RepID=A0A7E4VGU2_PANRE) HSP 1 Score: 61.2 bits (147), Expect = 3.110e-6 Identity = 60/226 (26.55%), Postives = 89/226 (39.38%), Query Frame = 2 Query: 389 DAATSVRFFLRHEVFTQGVKLDRDRRAGALISFLDLLATSFPG--------------------------KRNRASFRSLAADLKRDNGMNDIARWDKRIRNLAIGHFPASEEDNWPAANIETKSDGNVVHYMSGLWSLFHALSVSSAPQRQS-----PHEMMEGVHSFVYTFFRCEYCRAHFLEMYENCDNGRCAIPKASNMRGGQTSTAEPALALWVWRMHNAVN 973
D ++R+ L EV G L AL SF+D+LA +FP R+ L L D+ ++ R +++ N FP S + W T Y GLW+ FHAL+VS+ Q+ P +++ + +V +FF CE+CR HF +M + M Q T E L++WR HN VN
Sbjct: 312 DMLKAMRYSLFREVARNGGPLV-GANLSALYSFVDILANNFPTVTLDTTNNDTELPLSNSPRAVSVFAHMRDFLDAHGLEEALSVDDWQSEFVRAEEQFENP----FPISAD--WDHCKGSTPQYRG---YTCGLWTTFHALTVSAYKTGQNDLTFRPLPILQSIRDYVLSFFGCEHCRKHFQKM----------TTRTFKMEA-QVRTTEDTY-LYLWRAHNIVN 515
BLAST of mRNA_S-firma_F_contig10065.135.1 vs. uniprot
Match: A0A1I8C8K0_9BILA (Sulfhydryl oxidase n=1 Tax=Rhabditophanes sp. KR3021 TaxID=114890 RepID=A0A1I8C8K0_9BILA) HSP 1 Score: 60.8 bits (146), Expect = 4.160e-6 Identity = 59/239 (24.69%), Postives = 93/239 (38.91%), Query Frame = 2 Query: 389 DAATSVRFFLRHEVFTQGVKLDRDRRAGALISFLDLLATSFP-----------------GKRNRASFRSL---------AADLKRDNGMNDIARWDKRIRNLAIGHFPASEEDNWPAANIETKSDGNVVHYMSGLWSLFHALSVSSAPQRQS-----PHEMMEGVHSFVYTFFRCEYCRAHFLEMYENCDNGRCAIPKASNMRGGQTSTAEPALALWVWRMHNAVNTANALEADPPEEP 1012
D ++R+ L EV G L + AL +F++LL+ FP + + F L A LK D+ ++ R +K + +P +W N S G Y GLW+ FHAL+VS+ S P ++ + +V FF C +CR HF++M + ++ L++WR HN VN L+ D E+P
Sbjct: 315 DMLKAIRYALYREVTRNGEDL-KGNNLTALFNFVNLLSDYFPVTTINETISTNEITLESASKAQQVFEKLKQYLIGKMIANHLKADDWTKEVNRLEK------LYDYPFPVNASWQQCN---GSSGQFRGYTCGLWTAFHALTVSAYKNAPSGNYFDPMTVLYSIKGWVSEFFGCMHCREHFVKMTSQTYKMEDHVKNRDDVY------------LYLWRAHNIVN--KRLKGDNTEDP 529 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10065.135.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 15 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10065.135.1 >prot_S-firma_F_contig10065.135.1 ID=prot_S-firma_F_contig10065.135.1|Name=mRNA_S-firma_F_contig10065.135.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=149bp MNDIARWDKRIRNLAIGHFPASEEDNWPAANIETKSDGNVVHYMSGLWSLback to top mRNA from alignment at S-firma_F_contig10065:137..5064- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10065.135.1 ID=mRNA_S-firma_F_contig10065.135.1|Name=mRNA_S-firma_F_contig10065.135.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=4928bp|location=Sequence derived from alignment at S-firma_F_contig10065:137..5064- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10065:137..5064- >mRNA_S-firma_F_contig10065.135.1 ID=mRNA_S-firma_F_contig10065.135.1|Name=mRNA_S-firma_F_contig10065.135.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=894bp|location=Sequence derived from alignment at S-firma_F_contig10065:137..5064- (Sphaerotrichia firma ET2_F female)back to top |