mRNA_S-firma_F_contig1006.123.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig1006.123.1
Unique NamemRNA_S-firma_F_contig1006.123.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
BLAST of mRNA_S-firma_F_contig1006.123.1 vs. uniprot
Match: D8LC79_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC79_ECTSI)

HSP 1 Score: 1089 bits (2817), Expect = 0.000e+0
Identity = 584/891 (65.54%), Postives = 665/891 (74.64%), Query Frame = 1
Query:    1 MRLETVEVLALASEAAGSQHWSRNAARPRYSLSTRDVAERNFVHSFTCFDVAERVETDYDIVFAGRSNGTVVLWRMVPRNLFGGANKNDRVEETLVSSSPHRGAVTCLTHTRPGTYGSLVGPLVFSGSSDQTVKMWNAWDGAPFKETCLQTLAEHRGGVTSLSFAGDTTLISAARDGSVRLWRQQRGRKLLKFPFFCCVKCLSMYP-AVRVGVSQPIGKLNFDQPGTTVGAWPTAMCVAGGEAWTLYCGDSEGTVSVFQRSPVSASERVASAKRRPDSLTMEQLADNEVSLCRRWAHLHSLAITGLVLVPEHNFLLSMGNDGACRVLDYLQGNTFMTIENNDHQLFTSVAWDLAHEQLVLADASGVVQIWNTYTESLLLKVKVAKAVASTGPRKGQTLKALLGFHSSKADGMLYGMSPAEGCFFQWKMVKAGGSTLIGRHDDSIVGLGFQQASSLAGRETCNNSDTGLAEATPDVTTTAAGLKLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGFESVVLSASMDGVVRAWEMLGKSEKYRMRHPVPGVEVTSMLVLPGGSVLATGTDDGSVRFWQLETGAGESLKPHENTVSALAACRDRQGSLILASAGFEGVIAIWRAHAKDGFNRHQVPTVDFSISRAHGAEDGSDAEVLCLAFVAADAPLLASAGNDRVVRCWGFREHACVLLAMLEGHKDSIEALVADGLFLLSGSCDGVVRVWNIASLEHKDQSSFGESASFSATSCRRENGPPDAITTVGEIQAHANGIAGLAIMTTGARHNSSSRAVLGEEGEEQGQVAMGGLLVTCGNAEGIVKIWDYTHVEDDGGCGR 2670
            M LE VEVLALA E A   HWSRN ARPRYSL T +  + +F HSFTCFDVAERVE D+DIVFAGRSNG VVLWRMV RN+FGGANKNDRV+E L+++SPHRGAVTCLTHTR GTYGSL+GPL+FSGS+D TVK+WNAW G PFKE CLQT+AEHRGGVT+L+FAGDTTLIS ARDGSVRLWR QRGRKLL+FPFFCCVKCLS+YP AV  G+S+ IG     QPG  V  WPTA CVAGGE WT YCGDS GTVSVFQR+P SA++R+A+A++  D LTM QLAD+EV+L RRW HLHSLAITGLVLV EHNFLLS+GNDGACRVLDYLQGNTFMTIE++ H LFTSVAWDLAHEQLVLADASGVVQ+WNTYTESLLLK KVAKAV   GPRKGQ+LKAL+GFHSSKADGM+YGMSP+EGCFF+WK+VKA  S LIGRHDDSI+GLGFQ AS+   R    ++D G+     DV    AG   +                                                                      XXXXXXXXXXXXXXXXXX AGF  VVLSASM+GV+RAWE LGKSEKY MRH   GVEVTSMLVLPGGSVL TGTDDGSVRFWQL+TGAGES + H+NTVSALAA RD+ GSL+LASAGFEG I IWRAHAKDG  + +VPTVD+ +  AHGA DG D E+LCLAFVA+D P+LASAGNDRVVRCW  RE  C+LL +LEGH+DSIEALV+DGLFL SGSCDG VR+WN+++L H+D  S G+++       R E         VG  +AH NG++G+A+MT+  R++       G E +E G     GL+ TCG AEGIVKIWDYTHVEDDG CGR
Sbjct:    1 MHLEVVEVLALAGEGAAGSHWSRNTARPRYSLGTDEAKQASFHHSFTCFDVAERVEADHDIVFAGRSNGAVVLWRMVARNMFGGANKNDRVQEPLITASPHRGAVTCLTHTRQGTYGSLIGPLMFSGSADHTVKVWNAWAGPPFKEACLQTMAEHRGGVTALAFAGDTTLISTARDGSVRLWRPQRGRKLLRFPFFCCVKCLSVYPTAVGRGMSRSIGA---GQPGAFVHVWPTAACVAGGETWTFYCGDSNGTVSVFQRAPTSAAKRLANARKTSDILTMNQLADDEVTLHRRWTHLHSLAITGLVLVAEHNFLLSVGNDGACRVLDYLQGNTFMTIESDGHSLFTSVAWDLAHEQLVLADASGVVQVWNTYTESLLLKKKVAKAVTYIGPRKGQSLKALMGFHSSKADGMMYGMSPSEGCFFRWKLVKAESSVLIGRHDDSILGLGFQGASAFPSRRNAPSNDGGI-----DV----AGRAGNVQKLEDRSEKKNVYESDGSCTAVVGTTCKELEGTGLESDGDKRPTDQRGSHGSMGGVAEIHNSDTEASEEXXXXXXXXXXXXXXXXXXEAGFGLVVLSASMNGVIRAWETLGKSEKYCMRHS-GGVEVTSMLVLPGGSVLVTGTDDGSVRFWQLDTGAGESFQAHDNTVSALAAYRDQLGSLVLASAGFEGAIIIWRAHAKDGLKKDRVPTVDYCVRDAHGALDGLDGEILCLAFVASDVPVLASAGNDRVVRCWRLRERTCILLLVLEGHEDSIEALVSDGLFLFSGSCDGAVRIWNVSNLGHEDNVSLGDNSRHRGEMGRTET------MMVGAFKAHPNGVSGMAVMTS-ERNSRVDVVYAGRESQEAG-----GLIATCGKAEGIVKIWDYTHVEDDGTCGR 866          
BLAST of mRNA_S-firma_F_contig1006.123.1 vs. uniprot
Match: A0A6H5JSR9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSR9_9PHAE)

HSP 1 Score: 266 bits (680), Expect = 4.950e-78
Identity = 132/180 (73.33%), Postives = 149/180 (82.78%), Query Frame = 1
Query: 1720 AGFESVVLSASMDGVVRAWEMLGKSEKYRMRHPVPGVEVTSMLVLPGGSVLATGTDDGSVRFWQLETGAGESLKPHENTVSALAACRDRQGSLILASAGFEGVIAIWRAHAKDGFNRHQVPTVDFSISRAHGAEDGSDAEVLCLAFVAADAPLLASAGNDRVVRCWGFREHACVLLAMLE 2259
            AGF  VVLSAS++GV+RAWE LGKSEKY MRH   G EVTSMLVLPGGSVL TGTDDGSVRFWQL+TGAGES K H+NTVSALAA RD+ GSL+LASAGFEG I IWRAHAKDG  + +VPTV++ +  AHG  DG D E+LCLAFVA+D P+LASAGNDRVVRCW  RE  C+LL +LE
Sbjct:   91 AGFGLVVLSASLNGVIRAWETLGKSEKYCMRHS-GGAEVTSMLVLPGGSVLVTGTDDGSVRFWQLDTGAGESFKAHDNTVSALAAYRDQLGSLVLASAGFEGAIIIWRAHAKDGLKKDRVPTVEYCVRDAHGVLDGLDGEILCLAFVASDVPVLASAGNDRVVRCWRLRERTCILLLVLE 269          
BLAST of mRNA_S-firma_F_contig1006.123.1 vs. uniprot
Match: A0A835ZBD8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBD8_9STRA)

HSP 1 Score: 196 bits (499), Expect = 4.250e-48
Identity = 215/898 (23.94%), Postives = 300/898 (33.41%), Query Frame = 1
Query:  277 ETLVSSSPHRGAVTCLTHTRPGTYGSLVGP------------------------LVFSGSSDQTVKMWNAWDGAPFKETCLQTLAEHRGGVTSLSFA----------------GDTTLISA-------------------------ARDGSVRLWRQQRGRKLLKFPFFCCVK-----CLSMYPAVRV-------GVSQPIGKLNFDQPGTTVGAWPTAMCVAGGEAWTLYCGDSEGTVSVFQR-----------------------SPVSASERVASAKRRPDSLTMEQLADNEVSLCRRWAHLHSLAI--------------TGLVLVPEHNFLLSMGNDGACRVLDYLQGNTFMTIENNDHQ------------------------LFTSVAWDLAHEQLVLADASGVVQIWNTYTESLLLKVKVAKAVASTGPRKGQTLKALLGFHSSKA--------DGMLYGMSPAEGCF-------------------FQWK--------------------------MVKAGGSTLIGRHDDSIVGLGFQQASSLAGRETCNNSDTGLAEATPDVTTTAAGLKLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGFESVVLSASMDGVVRAWEMLGKSEKYRMR------------------------------------------HPVPGVEVTSMLVLPGGSVLATGTDDGSVRFWQLETGAGESLKPHENTVSALAACRDRQ-GSLILASAGFEGVIAIWRAHAKDGFNRHQVPTVDFSISRAHGAEDGS-----------------DAEVLCLAFVAADAPLLASAGNDRVVRCW 2217
            E L ++ PH GAV C+ HT  G    L                           LV SG +D  VK+W+ W+G   +ETCLQT  +HRG VT+L+F                 GD +L+S                          +RDG++R+WR Q GRKLL  PFFCC +      L+ +PA          G+S     L   +   +    PT + V G E WT                                      + VS  +R+ SA         E +   +V   +RW  LH+L                T L +V EH FL S G DG  RVLD  +G +FM + +                            ++T +AWDL HEQL+L D  G V++WN Y E+LLL+ +VA+ +A  G R G  +  L G   S A        D ++Y +SPA                         W+                          + +  G   +G H D++  +  QQ  +              A A     +  A                                                                                              A     V++ S+D  VRAW+  G +  +R                                                  E+    +LP G VLA GT+ G V+FW L T        H NTVSA+AA  D   G ++LA+  ++G +A+W  HAKDG   +++P ++  ++ AHG  D S                 D EVL LAFV   A LLAS GND  VRCW
Sbjct:  124 EGLSTARPHSGAVRCIAHTPAGGCAMLXXXXXXXXXXXXXXXXXXXXXXXXXRALVASGGADHAVKIWDPWEGLG-RETCLQTFTKHRGAVTALAFLLXXXXXXXXXXXXXXMGDGSLLSCFAXXXXXXXXXXXXXXXXXXXXXXXSRDGTLRVWRLQDGRKLLLNPFFCCARVIGAAALNAHPAPGAIAPWRARGLSAASPLLWIVELQRSAANAPTVLAVWGSEGWTAXXXXXXXXXXXXXAYVVXXXXXXXXXXXXXXXXXXXXTHVSPGDRLESAGAGALGAKGEHMPSYQVHATKRWERLHALGXXXXXXXXXXXXXXXTALAVVAEHGFLCSAGADGRARVLDLARGTSFMDLHHPVRGRGXXXXXXXXXXXXXXXXXGARAGVYTGLAWDLRHEQLILCDGFGNVEVWNAYAETLLLRKRVARPLAPRGARAGDAVPGLSGVRVSAAGVRVSTAEDTVVYALSPAAXXXXXXXXXXXXXXXXXXXXRALHWRRSTTRSRXXXXXXXXXXXXXXXXXCRLTERRGCRRLGAHGDAVTAILTQQPRTXXXXXXXXXXXXXXATAADADGSDGAA-----------------------------------------------------------------------------------------RGASAAQHCSVMTVSLDSTVRAWDADGDARGWRSSASXXXXXXXXXXXXXXXXXXXWQRVQKRKSAXXXXXXXXXXXRAAADAELACACLLPVGRVLAAGTEAGDVQFWMLGTSTCTVHAAHANTVSAIAAGEDASCGDILLATGSYDGDLALWGLHAKDGPVANRLPKLEQRVAGAHGRRDASLSAAAAATPLSDAAALVDTEVLALAFVGR-AGLLASGGNDGAVRCW 930          
BLAST of mRNA_S-firma_F_contig1006.123.1 vs. uniprot
Match: A0A662WIJ9_9STRA (TrmE-type G domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WIJ9_9STRA)

HSP 1 Score: 147 bits (371), Expect = 1.270e-32
Identity = 108/352 (30.68%), Postives = 176/352 (50.00%), Query Frame = 1
Query:  367 LVFSGSSDQTVKMWNAWDGA----PFKET--CLQTLAEHRGGVTSLSFAGDTT--LISAARDGSVRLWRQQRGRKLLKFPFFCCVKCLSMYPAVRVGVSQPIGKLNFDQPGTTVGAWPTAMCVAGGEAWTLYCGDSEGTVSVFQRSPVSASERVASAKRRPDSLTMEQLADNEVSLCRRWAHLHSLAITGLVLVPEHNFLLSMGNDGACRVLDYLQGNTFMTIENNDHQLFTSVAWDLAHEQLVLADASGVVQIWNTYTESLLLKVK--VAKAVASTGPRKGQTLKALLGFHSSKADGMLYGMSPAEGCFFQWKMVKAGGSTLIGRHDDSIVGLGFQQASSLAGRETCNNSD 1392
            L+F+GS+D+++K+W+ W GA    P + +  C+QTL EH G V  +         L+S + D +V+ W    GR LL +P+F         PA  +            QPGT    WP+ +CV  G + TL+ GDS G +SV+  S  S         +  + L  +  +  +  L R+++H HSL I+ L LV ++ F++S+G D   +V+D + G   +TI N     FTS +WD   + L+L D++G VQ+W+ + + L+ K K  V+  +A  G      +  L+G  ++  D +L G+  A G   QW + +  G      H D+IV +      S     +CN++D
Sbjct:  245 LLFTGSADRSIKVWDPWGGAETPLPTRSSYSCVQTLIEHSGSVVCVQVMTQQKHGLVSCSLDHTVKTWYPAEGRALLLYPWFL--------PAQSIA-----------QPGTN---WPSTLCVRSGASDTLFVGDSGGCISVYTSSATSMDSDTMLDLQHDEPLGGQSDSRFQFRLKRKYSHFHSLGISSLQLVADNCFVVSLGFDEKAQVIDAISGVLSLTISNASGARFTSCSWDSPSQLLLLGDSTGFVQVWDIFEDKLVGKKKMVVSPPLAIAG------IYVLIG--AAAGDFLLTGL--ANG-MKQWLINRDVGYRNCSGHSDAIVAVAVINGDSTG---SCNDAD 560          
BLAST of mRNA_S-firma_F_contig1006.123.1 vs. uniprot
Match: A0A0G4INE9_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4INE9_PLABS)

HSP 1 Score: 143 bits (361), Expect = 7.720e-32
Identity = 108/393 (27.48%), Postives = 183/393 (46.56%), Query Frame = 1
Query:  184 VFAGRSNGTVVLWRMVPRNLFGGANKNDRVEETLVSS---SPHRGAV---TCLTHTRPGTYGSLVGPLVFSGSSDQTVKMWNAWDGAPFKETCLQTLAEHRGGVTSLSFAGDTTLISAARDGSVRLWRQQRGRKLLKFPFFCCVKCLSMYPAVRVGVSQPIGKLNFDQPGTTVGAWPTAMCVAGGEAWTLYCGDSEG--TVSVFQRSPVSASERVASAKRRPDSLTMEQLADNEVSLCRRWAHLHSLAITGLVLVPEHNFLLSMGNDGACRVLDYLQGNTFMTIENNDHQLFTSVAWDLAHEQLVLADASGVVQIWNTYTESLLLKVKVAKAVASTGPRKGQTLKALLGFHSSKADGMLYGMSPAEGCFFQWKMVKAGGSTLIGRHDDSIVGL 1338
            +  G S+G +++W+          +K    + T+V     S H+G +    C+   R  T       +VFSGS+D+T++MWN W     +  C+QTL  H G VTS+ +  + TLIS++ D ++R+WR Q  R +  +P++ C + +S                         G W  ++ +  G+A TL+ GD +G   +S +Q                  ++  +Q+    +  CR   HLH   I+ ++ VP+ NF++++  D   +V D   GN F  +EN +   +T VAWD A ++++L DA G +Q+WN Y E  L  V++         R+G+  +  +  HS   D ++ G   A+ C   W + +   S     H   IVGL
Sbjct:   44 LMVGISSGDILVWK----------SKKSYSQTTMVQGRVLSGHKGRIWVMKCVPLPRSTTIH-----VVFSGSADRTIRMWNPWVPETDRP-CIQTLVGHNGTVTSIEY-DNGTLISSSTDHTIRVWRPQDERAITTYPWYICTQVVS-----------------------ESGDWVNSLSIRPGDAMTLFVGDGKGRWNLSAYQ------------------AMGRQQM----LKQCRPKQHLHERGISHVLFVPQENFVVTLSFDNTVQVHDASNGNGFFAVENPNRCRYTGVAWDHARQEMLLVDAIGYLQVWNVYMEKCLKVVRI---------RRGELHQ--ISVHSD--DLIVVG---AQECVEVWNVHRQVQSRECQGHTGPIVGL 358          
BLAST of mRNA_S-firma_F_contig1006.123.1 vs. uniprot
Match: A0A2P4YF63_9STRA (WD40 repeat-like protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YF63_9STRA)

HSP 1 Score: 141 bits (356), Expect = 3.340e-31
Identity = 116/401 (28.93%), Postives = 188/401 (46.88%), Query Frame = 1
Query:  184 VFAGRSNGTVVLWRMVPRNLFGGANKNDRVEETLVSSSPHRGAVTCLTHTRPGTYGSLVGP--LVFSGSSDQTVKMWNAWDG--APF----KETCLQTLAEHRGGVTSLSFAGDTT--LISAARDGSVRLWRQQRGRKLLKFPFFCCVKCLSMYPAVRVGVSQPIGKLNFDQPGTTVGAWPTAMCVAGGEAWTLYCGDSEGTVSVFQRSPVSASERVASAKRRPDSLTMEQLADN-----EVSLCRRWAHLHSLAITGLVLVPEHNFLLSMGNDGACRVLDYLQGNTFMTIENNDHQLFTSVAWDLAHEQLVLADASGVVQIWNTYTESLLLKVKVAKAVASTGPRKGQTLKALLGFHS----SKADGMLYGMSPAEGCFFQWKMVKAGGSTLIGRHDDSI 1329
            +F GR +G ++ W + P       +       T+     H GAV  L       +   +GP  L+FSGS+D+++K+W+ W G   P     +  C+QTL+EH G V  L      +  +IS + D +V+ W    GR LL +P++   + +S                   QPG++   WP+A CV  G   TL+ GDS G +SV+  S   A+E V       D +  +QL D+     + +L R+++H HSL I+ L +V ++ F++S+G D   +++D + G    TI +     F S  WD   + L+L D +G V +WN + + LL +    + + +T P       A++G HS    S  D +L G +       QW   +  G      H DS+
Sbjct:   19 IFGGRHDGAIMHWPISPT-----PSVTTPCANTMRG---HAGAVLTLD------FAPDLGPEGLLFSGSADRSIKIWDPWGGLDTPLPSRNRYACVQTLSEHCGSVVCLRVLTHQSHAIISCSLDRTVKTWYPTEGRGLLLYPWYLPAQSIS-------------------QPGSS---WPSAFCVRSGANGTLFIGDSAGGISVYANSSGKANEIVPDNA--IDIVDYKQLGDHFDEKFQWALRRKFSHFHSLGISKLQVVADNCFVVSLGFDEKAQIIDAISGALSATISSAGAARFISCTWDDQGQILLLGDVAGYVHLWNMFDDKLLAR----RQMITTAPL------AIVGMHSFTGTSGGDFLLIGQASGVK---QWLCNRNVGYVNCNGHSDSV 368          
BLAST of mRNA_S-firma_F_contig1006.123.1 vs. uniprot
Match: A0A329SJX5_9STRA (tRNA modification GTPase n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SJX5_9STRA)

HSP 1 Score: 140 bits (352), Expect = 4.330e-30
Identity = 116/407 (28.50%), Postives = 191/407 (46.93%), Query Frame = 1
Query:  184 VFAGRSNGTVVLWRMVPRNLFGGANKNDRVEETLVSSSPHRGAVTCLTHTRPGT---YGSLVGP--LVFSGSSDQTVKMWNAWDG----APFKE--TCLQTLAEHRGGVTSLSFAGDTT--LISAARDGSVRLWRQQRGRKLLKFPFFCCVKCLSMYPAVRVGVSQPIGKLNFDQPGTTVGAWPTAMCVAGGEAWTLYCGDSEGTVSVFQRSPVSASERVASAKRRPDSLTMEQLADN-----EVSLCRRWAHLHSLAITGLVLVPEHNFLLSMGNDGACRVLDYLQGNTFMTIENNDHQLFTSVAWDLAHEQLVLADASGVVQIWNTYTESLLLKVKVAKAVASTGPRKGQTLKALLGFHS----SKADGMLYGMSPAEGCFFQWKMVKAGGSTLIGRHDDSIVGL 1338
            +F GR +G ++ W + P               T+ S++  RG      HTR      +   +GP  L+FSGS+D+++K+W+ W G     P K    C+QTL EH G V  +         ++S + D +V+ W    GR LL +P++   + +S                   QPG++   WP+A+CV  G   TL+ G+S G +SV+  S    +E     +   D++  +QL+D         L R+++H HSL I+ L ++ ++ F++S+G D   +V+D + G    TI +     F S  WD     L+L DA+G + +WN + + L+ K    K + ST P       A++G HS    +  D +L G+  A G   QW   +  G      H D++V +
Sbjct:  566 IFGGRHDGAIMHWGLSPSQ-----------SVTIPSANTMRG------HTRAVITLDFAPDLGPEGLLFSGSADRSIKIWDPWGGNDTPLPTKSGYACVQTLTEHSGSVVCVRILAQQNHGIVSCSLDRTVKTWYPAEGRALLLYPWYLPAQSIS-------------------QPGSS---WPSALCVRSG---TLFVGNSAGVISVYAHS--CDNENAVVPESVLDTVDDKQLSDQLDTRFHFGLKRKFSHFHSLGISSLQMIADNCFVVSLGYDEKAQVIDAISGALSSTICSASAARFISCTWDERGHILLLGDAAGYIHLWNIFEDKLVGK----KQMVSTMPL------AIVGMHSLSDTAAGDFLLTGL--ANGVK-QWLCNRNVGYVNCSGHSDAVVAV 915          
BLAST of mRNA_S-firma_F_contig1006.123.1 vs. uniprot
Match: G4YZT3_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YZT3_PHYSP)

HSP 1 Score: 136 bits (343), Expect = 1.560e-29
Identity = 127/419 (30.31%), Postives = 190/419 (45.35%), Query Frame = 1
Query:  184 VFAGRSNGTVVLWRMVPRNLFGGANKNDRVEETLVSSSP---HRGAVTCLTHTRPGTYGSLVGP--LVFSGSSDQTVKMWNAWDGA----PFKE--TCLQTLAEHRGGVTSLS-FAGDTTLISAARDGSVRLWRQQRGRKLLKFPFFCCVKCLSMYPAVRVGVSQPIGKLNFDQPGTTVGAWPTAMCVAGGEAWTLYCGDSEGTVSVFQRSPVSASERVASAKRRPDSLTMEQLADNEVSLCRRWAHLHSLAITGLVLVPEHNFLLSMGNDGACRVLDYLQGNTFMTIENNDHQLFTSVAWDLAHEQLVLADASGVVQIWNTYTESLLLKVKVAKAVASTGPRKGQTLKALLGFHS----SKADGMLYGMSPAEGCFFQWKMVKAGGSTLIGRHDDSIVGLGFQQAS-SLAGRETCNNS 1389
            +F GR +G ++ W +           +     T+ S++    H GAV  L       +   +GP  L+FSGS+D+++K+W+ W GA    P K    C+QTL EH G V  L        +IS + D +V+ W    GR LL +P++         PA  +            QPG+    WP+A CV  G   TL+ GDS G +S                    D + M+     + SL R+++H HSL I+ L +V +  F++S+G D   +++D + G    TI +     FTS AWD   + L+L DA+G V +WN + + LL K K+  A+             ++G HS       D +L G+  A G   QW   +  G    G H DSI+   FQ  S SL G   C +S
Sbjct:   50 IFGGRHDGAIMHWPI-----------SQAPSVTIPSANTLRGHTGAVLTLD------FAPELGPEGLLFSGSADRSIKIWDPWGGADSSLPTKGGYACVQTLTEHCGSVVCLRVLTRSHGIISCSLDRTVKTWYPAEGRALLLYPWYL--------PAQSIL-----------QPGS---CWPSAFCVRSGANGTLFIGDSGGGISQLG-----------------DQVDMKF----QFSLKRKFSHFHSLGISKLEIVADSCFVVSLGFDEKAQIIDAISGALSSTICSASAARFTSCAWDDRGQILLLGDAAGYVHLWNIFEDKLLGKKKMVAAMPL----------GIVGMHSLTGIPAGDFLLTGL--ANGVK-QWICNRNVGYVSCGGHSDSILTKTFQFFSASLDGSIRCWDS 395          
BLAST of mRNA_S-firma_F_contig1006.123.1 vs. uniprot
Match: D0NJH3_PHYIT (Uncharacterized protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NJH3_PHYIT)

HSP 1 Score: 135 bits (341), Expect = 2.180e-29
Identity = 113/404 (27.97%), Postives = 176/404 (43.56%), Query Frame = 1
Query:  184 VFAGRSNGTVVLWRMVPRNLFGGANKNDRVEETLVSSSPHRGAVTCLTHTRPGTYGSLVGP--LVFSGSSDQTVKMWNAWDG----APFKE--TCLQTLAEHRGGVTSLSFAGDTT--LISAARDGSVRLWRQQRGRKLLKFPFFCCVKCLSMYPAVRVGVSQPIGKLNFDQPGTTVGAWPTAMCVAGGEAWTLYCGDSEGTVSVFQRSPVSASERVASAKRRPDSLTMEQLADNEVSLCRRWAHLHSLAITGLVLVPEHNFLLSMGNDGACRVLDYLQGNTFMTIENNDHQLFTSVAWDLAHEQLVLADASGVVQIWNTYTESLLLKVKVAKAVASTGPRKGQTLKALLGFHSSKADGMLYGMSPAEGC---FFQWKMVKAGGSTLIGRHDDSIVGLGFQQAS 1356
            +F GR +G ++ W ++                   +   H GAV  L       + S +GP  L+FSGS+D+++K+W+ W G     P K   TC+QTL EH G V  +         L+S + D +V+ W    GR LL +P+F   + +S                   QPG++   WP+A+C+  G   TL+ GDS G +SV Q                            +  L R+++H HSL I+ L LV ++ F++S+G D   +V+D + G    TI +     F S +WD   + L+L D +G V +W  + + L+ K ++             T  A++G +S    G L G     G      QW   +  G      H D+IVG+ F  AS
Sbjct:   46 IFGGRHDGAIMHWPIL--------QSQSLTTPCANTMRGHTGAVLTLD------FASDLGPGGLLFSGSADRSIKIWDPWSGNGTPLPTKSSHTCVQTLTEHCGSVVCVQILAQQNHGLVSCSLDRTVKTWYPAEGRALLLYPWFLPAQSIS-------------------QPGSS---WPSALCIRSG---TLFVGDSAGGISVDQTD-----------------------TRFQFGLKRKFSHFHSLGISRLELVADNCFVVSLGYDEKAQVIDAISGALSATIRSASGARFLSCSWDEQDQVLLLGDVAGCVHLWTIFEDKLIGKRQIVS----------MTPLAIVGMYS--LSGTLAGEFLLTGLANGVKQWLCNRNVGYVNCSGHSDAIVGIVFFSAS 375          
BLAST of mRNA_S-firma_F_contig1006.123.1 vs. uniprot
Match: A0A833WXG3_PHYIN (WD domain G-beta repeat n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833WXG3_PHYIN)

HSP 1 Score: 135 bits (341), Expect = 2.620e-29
Identity = 108/364 (29.67%), Postives = 172/364 (47.25%), Query Frame = 1
Query:  301 HRGAVTCLTHTRPGTYGSLVGP--LVFSGSSDQTVKMWNAWDG----APFKE--TCLQTLAEHRGGVTSLSFAGDTT--LISAARDGSVRLWRQQRGRKLLKFPFFCCVKCLSMYPAVRVGVSQPIGKLNFDQPGTTVGAWPTAMCVAGGEAWTLYCGDSEGTVSVFQRSPVSASERVASAKRRPDSLTMEQLADN-----EVSLCRRWAHLHSLAITGLVLVPEHNFLLSMGNDGACRVLDYLQGNTFMTIENNDHQLFTSVAWDLAHEQLVLADASGVVQIWNTYTESLLLKVKVAKAVASTGPRKGQTLKALLGFHSSKADGMLYGMSPAEGC---FFQWKMVKAGGSTLIGRHDDSIVGL 1338
            H GAV  L       + S +GP  L+FSGS+D+++K+W+ W G     P K   TC+QTL EH G V  +         L+S + D +V+ W    GR LL +P+F   + +S                   QPG++   WP+A+C+  G   TL+ GDS G +SV+  S  S++     ++   D +  +  +D      +  L R+++H HSL I+ L LV ++ F++S+G D   +V+D + G    TI +     F S +WD   + L+L D +G V +W  + + L+ K ++             T  A++G +S    G L G     G      QW   +  G      H D+IVG+
Sbjct:    4 HTGAVLTLD------FASDLGPGGLLFSGSADRSIKIWDPWSGNGTPLPTKSSHTCVQTLTEHCGSVVCVQILAQQNHGLVSCSLDRTVKTWYPAEGRALLLYPWFLPAQSIS-------------------QPGSS---WPSALCIRSG---TLFVGDSAGGISVYSHS--SSNNHAIVSETILDLVDDKYQSDQTDTRFQFGLKRKFSHFHSLGISRLELVADNCFVVSLGYDEKAQVIDAISGALSATIRSASGARFLSCSWDEQDQVLLLGDVAGCVHLWTIFEDKLIGKRQIVS----------MTPLAIVGMYS--LSGTLAGEFLLTGLANGVKQWLCNRNVGYVNCSGHSDAIVGI 322          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1006.123.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LC79_ECTSI0.000e+065.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JSR9_9PHAE4.950e-7873.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZBD8_9STRA4.250e-4823.94Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A662WIJ9_9STRA1.270e-3230.68TrmE-type G domain-containing protein n=2 Tax=Noth... [more]
A0A0G4INE9_PLABS7.720e-3227.48Uncharacterized protein n=1 Tax=Plasmodiophora bra... [more]
A0A2P4YF63_9STRA3.340e-3128.93WD40 repeat-like protein (Fragment) n=1 Tax=Phytop... [more]
A0A329SJX5_9STRA4.330e-3028.50tRNA modification GTPase n=1 Tax=Phytophthora cact... [more]
G4YZT3_PHYSP1.560e-2930.31Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
D0NJH3_PHYIT2.180e-2927.97Uncharacterized protein n=1 Tax=Phytophthora infes... [more]
A0A833WXG3_PHYIN2.620e-2929.67WD domain G-beta repeat n=1 Tax=Phytophthora infes... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig1006contigS-firma_F_contig1006:55..6164 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Seed ortholog2880.D8LC79
PFAMsDUF3337,WD40
Max annot lvl2759|Eukaryota
GOsGO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0032182,GO:0043130,GO:0044424,GO:0044464
Evalue0.0
EggNOG OGsKOG0308@1|root,KOG0308@2759|Eukaryota
Descriptionregulation of protein monoubiquitination
COG categoryT
Hectar predicted targeting categoryother localisation
Exons12
Model size2673
Cds size2673
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig1006.123.1prot_S-firma_F_contig1006.123.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig1006 55..6164 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815530.2014413-CDS-S-firma_F_contig1006:54..3591622815530.2014413-CDS-S-firma_F_contig1006:54..359Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1006 55..359 -
1696949392.5689619-CDS-S-firma_F_contig1006:54..3591696949392.5689619-CDS-S-firma_F_contig1006:54..359Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1006 55..359 -
1622815530.217401-CDS-S-firma_F_contig1006:794..9031622815530.217401-CDS-S-firma_F_contig1006:794..903Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1006 795..903 -
1696949392.5824225-CDS-S-firma_F_contig1006:794..9031696949392.5824225-CDS-S-firma_F_contig1006:794..903Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1006 795..903 -
1622815530.232514-CDS-S-firma_F_contig1006:1079..12621622815530.232514-CDS-S-firma_F_contig1006:1079..1262Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1006 1080..1262 -
1696949392.6262715-CDS-S-firma_F_contig1006:1079..12621696949392.6262715-CDS-S-firma_F_contig1006:1079..1262Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1006 1080..1262 -
1622815530.2466507-CDS-S-firma_F_contig1006:1713..19101622815530.2466507-CDS-S-firma_F_contig1006:1713..1910Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1006 1714..1910 -
1696949392.6468902-CDS-S-firma_F_contig1006:1713..19101696949392.6468902-CDS-S-firma_F_contig1006:1713..1910Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1006 1714..1910 -
1622815530.2620242-CDS-S-firma_F_contig1006:2395..29931622815530.2620242-CDS-S-firma_F_contig1006:2395..2993Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1006 2396..2993 -
1696949392.656368-CDS-S-firma_F_contig1006:2395..29931696949392.656368-CDS-S-firma_F_contig1006:2395..2993Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1006 2396..2993 -
1622815530.2757094-CDS-S-firma_F_contig1006:3362..35181622815530.2757094-CDS-S-firma_F_contig1006:3362..3518Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1006 3363..3518 -
1696949392.6676378-CDS-S-firma_F_contig1006:3362..35181696949392.6676378-CDS-S-firma_F_contig1006:3362..3518Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1006 3363..3518 -
1622815530.289109-CDS-S-firma_F_contig1006:3785..39201622815530.289109-CDS-S-firma_F_contig1006:3785..3920Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1006 3786..3920 -
1696949392.6816368-CDS-S-firma_F_contig1006:3785..39201696949392.6816368-CDS-S-firma_F_contig1006:3785..3920Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1006 3786..3920 -
1622815530.3075254-CDS-S-firma_F_contig1006:4171..43161622815530.3075254-CDS-S-firma_F_contig1006:4171..4316Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1006 4172..4316 -
1696949392.6909087-CDS-S-firma_F_contig1006:4171..43161696949392.6909087-CDS-S-firma_F_contig1006:4171..4316Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1006 4172..4316 -
1622815530.3213813-CDS-S-firma_F_contig1006:4526..47071622815530.3213813-CDS-S-firma_F_contig1006:4526..4707Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1006 4527..4707 -
1696949392.7006962-CDS-S-firma_F_contig1006:4526..47071696949392.7006962-CDS-S-firma_F_contig1006:4526..4707Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1006 4527..4707 -
1622815530.3344512-CDS-S-firma_F_contig1006:4901..51631622815530.3344512-CDS-S-firma_F_contig1006:4901..5163Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1006 4902..5163 -
1696949392.7089996-CDS-S-firma_F_contig1006:4901..51631696949392.7089996-CDS-S-firma_F_contig1006:4901..5163Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1006 4902..5163 -
1622815530.3488612-CDS-S-firma_F_contig1006:5398..56021622815530.3488612-CDS-S-firma_F_contig1006:5398..5602Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1006 5399..5602 -
1696949392.7173693-CDS-S-firma_F_contig1006:5398..56021696949392.7173693-CDS-S-firma_F_contig1006:5398..5602Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1006 5399..5602 -
1622815530.3616035-CDS-S-firma_F_contig1006:5966..61641622815530.3616035-CDS-S-firma_F_contig1006:5966..6164Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1006 5967..6164 -
1696949392.725729-CDS-S-firma_F_contig1006:5966..61641696949392.725729-CDS-S-firma_F_contig1006:5966..6164Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1006 5967..6164 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig1006.123.1

>prot_S-firma_F_contig1006.123.1 ID=prot_S-firma_F_contig1006.123.1|Name=mRNA_S-firma_F_contig1006.123.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=891bp
MRLETVEVLALASEAAGSQHWSRNAARPRYSLSTRDVAERNFVHSFTCFD
VAERVETDYDIVFAGRSNGTVVLWRMVPRNLFGGANKNDRVEETLVSSSP
HRGAVTCLTHTRPGTYGSLVGPLVFSGSSDQTVKMWNAWDGAPFKETCLQ
TLAEHRGGVTSLSFAGDTTLISAARDGSVRLWRQQRGRKLLKFPFFCCVK
CLSMYPAVRVGVSQPIGKLNFDQPGTTVGAWPTAMCVAGGEAWTLYCGDS
EGTVSVFQRSPVSASERVASAKRRPDSLTMEQLADNEVSLCRRWAHLHSL
AITGLVLVPEHNFLLSMGNDGACRVLDYLQGNTFMTIENNDHQLFTSVAW
DLAHEQLVLADASGVVQIWNTYTESLLLKVKVAKAVASTGPRKGQTLKAL
LGFHSSKADGMLYGMSPAEGCFFQWKMVKAGGSTLIGRHDDSIVGLGFQQ
ASSLAGRETCNNSDTGLAEATPDVTTTAAGLKLDDDDSAFVLEEAEEEEE
EARGSCGGAPVTKPGRRGGASRLGGQSSSRRRLSAGAGAASGSLGGSAPG
AGKEGAEEEEEEEEEEEEEEEEEAGFESVVLSASMDGVVRAWEMLGKSEK
YRMRHPVPGVEVTSMLVLPGGSVLATGTDDGSVRFWQLETGAGESLKPHE
NTVSALAACRDRQGSLILASAGFEGVIAIWRAHAKDGFNRHQVPTVDFSI
SRAHGAEDGSDAEVLCLAFVAADAPLLASAGNDRVVRCWGFREHACVLLA
MLEGHKDSIEALVADGLFLLSGSCDGVVRVWNIASLEHKDQSSFGESASF
SATSCRRENGPPDAITTVGEIQAHANGIAGLAIMTTGARHNSSSRAVLGE
EGEEQGQVAMGGLLVTCGNAEGIVKIWDYTHVEDDGGCGR*
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mRNA from alignment at S-firma_F_contig1006:55..6164-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig1006.123.1 ID=mRNA_S-firma_F_contig1006.123.1|Name=mRNA_S-firma_F_contig1006.123.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=6110bp|location=Sequence derived from alignment at S-firma_F_contig1006:55..6164- (Sphaerotrichia firma ET2_F female)
ATGCGCCTGGAAACTGTAGAAGTGTTAGCTCTCGCCAGTGAGGCGGCTGG CTCCCAGCACTGGAGCCGAAACGCCGCCCGACCTCGGTACTCCCTGAGCA CCCGCGATGTCGCCGAGCGAAACTTTGTCCACTCCTTCACGTGCTTCGAC GTCGCCGAGCGAGTGGAAACGGACTATGACATCGTCTTTGCGGGAAGGGT AAGGTTTGCCCCAGTACAGGCAGCAACACGTATTTTTGTGTCGTTTTCTT CGTGGGTGCGACGTAGAAGTCAGGTATCCTACACTCCCAATGGTGTCTCC AACCGATGACCTTGTTTATTGTAACCAGGAAGGAAGGGGTCGCAAAGCCC ACGAGGCTCGTGATGTGGAGATATGATCACGAACTGTATTGACCCCTGGC CGTTGTCAGATGACAGGTGTGTTGTACATCTACCTTACGGCCCACTTCCG CCAGTTTGCTCAACGATCTTGTTGTATCGTCGTGCACGAGGGACGAACCC CACAATTACAACGTCACATACATGTTGCTGGCGTTCGCCCTTGTGCAATT TTCACGATGCAGAGTAATGGAACAGTCGTTCTTTGGAGGATGGTCCCACG AAACTTGTTTGGCGGGGCCAACAAAAACGATCGGGTGGAAGAGACTCTCG TGTCATCCTCGCCTCATCGAGGTGCCGTCACGTGCCTAACACATACCCGT CCCGGCACATACGGTTCCTTGGTAGGACCGCTGGTTTTCAGCGGATCAAG CGACCAGACCGTAAAGGTGAGGTCTGTGAGGAGACTTCAGTGAACCGCAG GCTGCCTAGAGCGGCGTGTGCTGTACATGTTGCAGTTTGCTTGTAAAAAC GCGTTTCGAGGAACAGGCCAGAGCATCTAGCCTGCTGATGTATGCGTCAG AAAAATATCTTCAACTTGCTGGGCTGAGCTGGCCTCCGCCCCAAGATTCG AATGCGTTCTGCACTGACTGGGCTGCTTTGTGTCTAATTCCGCAAAGGAA GATGTGGAACGCCTGGGATGGGGCCCCGTTCAAAGAAACCTGCCTGCAGA CGCTGGCAGAGCACCGAGGAGGAGTTACCTCACTGTCTTTCGCCGGGGAC ACAACCCTCATTTCTGCCGCAAGGGATGGGAGCGTGCGGCTGTGGCGACA GCAGCGAGGCAGAAAGCTCTTGAAGTTCCCTTTCTTCTGCTGCGTCAAGT GCCTCTCCATGTACCCTGCTGTGCGTGTCGGGGTGTCCCAGCCAATCGGT AAGCTTAATTTCGGTCCAACATACACACCGGTAAACCAAACAACCGGTCG AGCCTACAGCAGTAGAAGCAGGAGTATTGGGAGCAATGGATATGGAACAC GATGTAGGCGTGTTGGTAGCGCCGGGTGTGACTCCTCTTTCACGTTGGTT TTCGTGGATCGCTGGATCCCCCAATTCATACTCCGATTCGTGTTCGATGC TGGGCAGATCAACCCGGGACTACGGTAGGTGCGTGGCCAACAGCGATGTG CGTCGCAGGTGGAGAGGCGTGGACCCTCTACTGCGGTGACAGCGAGGGAA CGGTGTCCGTTTTCCAAAGATCTCCCGTTTCCGCGTCGGAGCGCGTGGCA AGCGCGAAAAGGCGCCCGGACAGTCTGACGATGGAACAGTGAGTAGGGTT CTGTTGAAGAGTGTCGGGGTCCCCACAGTTTTGGTCTGACGGTAGGCCGG TCACACGGCGAGTAGAGTCGGGGTTTGTCAACAACCAAATTTGAATACGG CGCCGCAACTAAACTGTCTGCTTGTTGCTGGCAAGGTACGGAGGAGGTAC CATTGAAGGATGCACTCTCGAGCGCCTCGTTGCTTGTACTTACCGCAGGT TGGCGGATAACGAGGTGTCGCTTTGCAGAAGATGGGCCCACCTGCATAGC CTGGCTATCACGGGGCTCGTGTTGGTGCCGGAGCACAACTTTCTACTCAG CATGGGCAACGACGGGGCATGCCGGGTTCTTGACTACCTTCAGGTATGTG CAAACGGTAGCCCCGCGAAGAAAATATGCTGAAGACGCTGCTGACCTGAG CCTTGCCCCCGTTCCCTCTGTGGCTAGACTGAAGTGGGGTTTCCGGTATT GTCGTCTCACGCGTTAGGGAGCCGAGTCCAAGTGCAGCTTGTCAAACACA AATCGAGGGTTATTTCGCCCGCTAGGCCGTCGATCGTGCCTGCCGTGCTG CCCTTGCTGAACACGCGCTGGAACGAAACGACTATTTACGACAGGGCAAC ACTTTCATGACAATTGAGAACAACGATCACCAGCTTTTCACGTCCGTGGC GTGGGACCTGGCCCACGAGCAGCTGGTGCTGGCGGACGCTTCGGGTGTGG TGCAAATTTGGAACACCTACACGGAGTCGGTGTGTGACCGTCGCTGATGA CATCGGAAAAATCGGTATCTTCTTTCCGGTATGCCGGTCGGTTTCTTCCG TTGTTGAATTGGGATCACCTTGAGGGGAGCGTGAAATATGTTGTGCTCCA AAAACATTATCATTTCGGGCAAAGTTGATACAGTGAGCTGGTGATAACAA ACTATGGATAGCAGGCTTCGACGGGGCAACCTTTAATATGGTCCTTCGAC CCCTCTGCCTGTCTCTTGCCTGGTGCTCTCATTTTCTGCAACGCAGCTTC TCCTTAAAGTAAAAGTGGCGAAGGCAGTCGCCTCCACCGGGCCTCGCAAG GGCCAGACCTTAAAAGCGCTACTCGGTTTCCACTCCTCGAAGGCGGATGG CATGCTGTACGGCATGTCTCCCGCGGAGGGCTGCTTCTTCCAATGGAAGA TGGTGCGACAAATTTGTTCAGCTCACAGGACTTTCTTCGACAGCTGTAGA CCTCTTTTGTCGTCGCATTCACAATTCGCTGCCCGAGGTCTCGAAAAGGG CGACGATGCGTCTCGTTCCTCTATCGTGCCTTTCACCGTGTGGGAGTGTC GTAGCCTAGCTGAAGCAACAGCAGTGGCGGCGTGCTCATCACCAAAATTC ACGCGGGACTTGCTATGAGAACGCCACGGGAGCCGCGTTCGTGAGAGTCC CAACAGTTCGAGGTGCCATATCCTGCGCCTGAAAACCGTTTAGATTGTGC ATCCTTCCAAACCGAATCTGCCTGCTGAATGCGATGCTTGTGCGGGCCTC TCGGCCGGGGTCTAATACCAGGTCAAAGCAGGCGGCAGCACCCTGATCGG GCGACACGACGACAGCATAGTTGGCCTAGGCTTCCAGCAAGCGTCGTCGT TGGCTGGGCGAGAAACGTGCAATAACAGCGACACCGGTCTCGCCGAAGCA ACGCCTGACGTCACCACCACGGCGGCAGGGCTCAAGCTCGACGACGACGA CAGCGCGTTCGTCCTCGAGGAAGCGGAGGAGGAGGAAGAAGAGGCGCGTG GAAGCTGCGGCGGCGCACCCGTGACCAAGCCGGGCCGGCGAGGCGGTGCG AGCAGACTCGGAGGCCAGAGCAGCAGCCGCCGCCGCCTCAGCGCGGGGGC TGGGGCTGCAAGCGGCAGCCTCGGTGGTAGTGCACCAGGCGCAGGAAAGG AGGGCGCAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAG GAGGAGGAGGCCGGGTTTGAGTCGGTGGTGCTGTCAGCTAGCATGGACGG CGTCGTAAGGGCGTGGGAGATGCTCGGGAAGAGCGAGAAGTATCGCATGC GGCACCCGGTGCCGGGGGTGGAGGTGACGAGCATGCTCGTGCTGCCGGGG GGGTCTGTCTTGGCCACTGGTGAGAACCTCGTCTGTGTGTTGTCAGCGTT TGCGACTGGTGTTGGTGTTACACTGCTGTACGAGGCTGCTTGCAACACCT GGCTGGACCTATCGTTATACTTTCGGCAACCCCCCCCCCCCCAAAGGTTT CTCTCAGAACCCCCCAAGCAAACACCGTGACGGATTGAAAATGGGCAGAA CCACATTGTTGGGGTTTTTCAAGACACCACGCGTGCAAGGTACCACAATG TCCTGGACCCTCCGGGGGGGGGGGTTATGGTGATTGTCGCGCATCATCGC ACTGGCGTAGCCTAAGTTGTACCGCAATCTCCTTTCAGGTCCAATCCCAG GGATAAGAATCGCTATGCATATGCGTAGAAGCTTTTTTCTATTTTCGGCG CGGGTCGGCAACTTCTGCTCGTACAGAGGAACTCGAACGGGCCTAAACTA CGACACGTTAAAATTGTTACATTGTCATTGTTTTTTTTTGTTTTCTTCTA CCAGGAACCGACGACGGGAGCGTACGATTCTGGCAGCTAGAGACTGGGGC AGGAGAATCATTGAAACCCCACGAGAACACCGTCAGCGCTCTCGCGGCGT GCAGGGATCGACAGGGGTCGTTGATACTCGCCAGCGCCGGCTTCGAAGGC GTAATCGCCATATGGAGGGCGCATGCCAAGGACGGCTTCAACCGACATCA AGTGAGGGGTGAGGGGGGCGGGGGGGGAAGAGAGAGGGAGAGGGAGAGGG AGAGAGAGCAAGTATTGGTCAAGTTCGTCTCCACTCCGTGTGCTTGTTAG CACATTCGGAGGTTGTTGTGCCTTCTGCTTGGTTTCCCTGAAAAAAAACA CGCGTGGTACAGTAGTACTGTAGTGTCTTCGGCCGCAGAAGCTATGTAGT GTTCATGCTCTCTATTCCGCACGCCGGTGCATCCGCAGCTATCAAGCGAT ATCGACAGGCTCTTGTTTTTCGCTGCAACCGCCGTGTCCCAATTGCGAGG CTCTCCTCCCGGGAGAACTCGTTTCCCCGTCAGAGGCGCACGCACCAACG CGCAAACAAACCTTTCGACCACCCGACCTACACACACGCTCCGAACACGG ACAACCGCCGGCGACCAAACCCTGACCCTCGTTGCTCTCGGGTTTGGAAC AGGTCCCAACCGTGGACTTCTCCATTAGCCGCGCTCACGGCGCCGAAGAC GGATCAGATGCCGAGGTTCTTTGTCTGGCGTTCGTGGCCGCGGATGCCCC GTTGCTGGCCAGCGCGGGCAACGACCGTGTCGTGCGGTGTTGGGGTTTCC GGGAGCATGCTTGCGTCTTGTTGGCGATGCTGGAGGTGCGTGTGCGACGG GAGCAATCGTAATCTACCGGTAGGGTATTGTCGCCGGCGTGTGCGTGCGT GATGCGTTGCTCTATGTGTACAATCTCCGTTCCGCCGTATGGTGTGTTCA CAGACGGCTTCTTTTTTCACGGCATACCCCGCTCGCTGCCTTGTTGCCCG CTTCTATCCAGGGGCACAAGGATTCGATCGAGGCACTGGTCGCGGATGGG TTGTTCCTTCTCAGCGGGAGCTGTGACGGGGTGGTCCGAGTGTGGAACAT CGCGAGTCTCGAGCACAAAGGTGGGGGCTAGAAAGTCGGTCGTACCATTG ACTGACGCGGTGACCTTCGATGAACGCGACATTTTAAAGCGAAAATGGGG GATGGTTTGCGTGGTAGATCGCGTGGTTCGGTTTCCTCTTGTTGGTGAAA GGACGAAGAAACAGAACCCCAAGAATAAGCATCTAGTCGCTTTGGGCTCG AAACGTTCAGTGCGACGACGGCGTCAAGACGCTCTGACTTCAACGCAATT CGCCTGCAGCGGGCCGGCCCGTCCTAAACCTGCTAGCAGTTTTAACCACG TACTGCTTGCACCGAATTGTGGCATTTCCTGCCAAAAGCCCATCGCTTCG GGGTTTCTTGTTCGTTTTTCGCTCCCAGGCCCCCACGCATGCCATCCATT TTTACGACTCCGATTCCGCGCGTCCGCGATTCCTCGTTGCCTCTACTATT GCCAGACCAAAGCAGCTTCGGCGAGAGCGCTAGCTTTAGCGCTACCAGCT GTCGTCGAGAAAACGGACCACCGGACGCCATCACGACGGTAGGGGAGATC CAAGCACACGCCAACGGGATCGCCGGCCTGGCCATCATGACCACCGGTGC GAGGCACAACAGTAGTAGCCGCGCCGTTCTCGGCGAAGAGGGAGAAGAAC AAGGACAGGTCGCGATGGGAGGCTTGCTCGTGACGTGCGGCAACGCCGAG GGGATCGTCAAGATATGGGACTACACGCACGTGGAGGACGACGGCGGCTG CGGGAGGTAG
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Coding sequence (CDS) from alignment at S-firma_F_contig1006:55..6164-

>mRNA_S-firma_F_contig1006.123.1 ID=mRNA_S-firma_F_contig1006.123.1|Name=mRNA_S-firma_F_contig1006.123.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=5346bp|location=Sequence derived from alignment at S-firma_F_contig1006:55..6164- (Sphaerotrichia firma ET2_F female)
ATGCGCCTGGAAACTGTAGAAGTGTTAGCTCTCGCCAGTGAGGCGGCTGG
CTCCCAGCACTGGAGCCGAAACGCCGCCCGACCTCGGTACTCCCTGAGCA
CCCGCGATGTCGCCGAGCGAAACTTTGTCCACTCCTTCACGTGCTTCGAC
GTCGCCGAGCGAGTGGAAACGGACTATGACATCGTCTTTGCGGGAAGGAT
GCGCCTGGAAACTGTAGAAGTGTTAGCTCTCGCCAGTGAGGCGGCTGGCT
CCCAGCACTGGAGCCGAAACGCCGCCCGACCTCGGTACTCCCTGAGCACC
CGCGATGTCGCCGAGCGAAACTTTGTCCACTCCTTCACGTGCTTCGACGT
CGCCGAGCGAGTGGAAACGGACTATGACATCGTCTTTGCGGGAAGGAGTA
ATGGAACAGTCGTTCTTTGGAGGATGGTCCCACGAAACTTGTTTGGCGGG
GCCAACAAAAACGATCGGGTGGAAGAGACTCTCGTGTCATCCTCGCCTCA
TCGAGGTGCCGTCACGTGCCTAACACATACCCGTCCCGGCACATACGGTT
CCTTGGTAGGACCGCTGGTTTTCAGCGGATCAAGCGACCAGACCGTAAAG
AGTAATGGAACAGTCGTTCTTTGGAGGATGGTCCCACGAAACTTGTTTGG
CGGGGCCAACAAAAACGATCGGGTGGAAGAGACTCTCGTGTCATCCTCGC
CTCATCGAGGTGCCGTCACGTGCCTAACACATACCCGTCCCGGCACATAC
GGTTCCTTGGTAGGACCGCTGGTTTTCAGCGGATCAAGCGACCAGACCGT
AAAGATGTGGAACGCCTGGGATGGGGCCCCGTTCAAAGAAACCTGCCTGC
AGACGCTGGCAGAGCACCGAGGAGGAGTTACCTCACTGTCTTTCGCCGGG
GACACAACCCTCATTTCTGCCGCAAGGGATGGGAGCGTGCGGCTGTGGCG
ACAGCAGCGAGGCAGAAAGCTCTTGAAGTTCCCTTTCTTCTGCTGCGTCA
AGTGCCTCTCCATGTACCCTGCTGTGCGTGTCGGGGTGTCCCAGCCAATC
GGTAAGCTTAATTTCGATGTGGAACGCCTGGGATGGGGCCCCGTTCAAAG
AAACCTGCCTGCAGACGCTGGCAGAGCACCGAGGAGGAGTTACCTCACTG
TCTTTCGCCGGGGACACAACCCTCATTTCTGCCGCAAGGGATGGGAGCGT
GCGGCTGTGGCGACAGCAGCGAGGCAGAAAGCTCTTGAAGTTCCCTTTCT
TCTGCTGCGTCAAGTGCCTCTCCATGTACCCTGCTGTGCGTGTCGGGGTG
TCCCAGCCAATCGGTAAGCTTAATTTCGATCAACCCGGGACTACGGTAGG
TGCGTGGCCAACAGCGATGTGCGTCGCAGGTGGAGAGGCGTGGACCCTCT
ACTGCGGTGACAGCGAGGGAACGGTGTCCGTTTTCCAAAGATCTCCCGTT
TCCGCGTCGGAGCGCGTGGCAAGCGCGAAAAGGCGCCCGGACAGTCTGAC
GATGGAACAATCAACCCGGGACTACGGTAGGTGCGTGGCCAACAGCGATG
TGCGTCGCAGGTGGAGAGGCGTGGACCCTCTACTGCGGTGACAGCGAGGG
AACGGTGTCCGTTTTCCAAAGATCTCCCGTTTCCGCGTCGGAGCGCGTGG
CAAGCGCGAAAAGGCGCCCGGACAGTCTGACGATGGAACAGTTGGCGGAT
AACGAGGTGTCGCTTTGCAGAAGATGGGCCCACCTGCATAGCCTGGCTAT
CACGGGGCTCGTGTTGGTGCCGGAGCACAACTTTCTACTCAGCATGGGCA
ACGACGGGGCATGCCGGGTTCTTGACTACCTTCAGGTTGGCGGATAACGA
GGTGTCGCTTTGCAGAAGATGGGCCCACCTGCATAGCCTGGCTATCACGG
GGCTCGTGTTGGTGCCGGAGCACAACTTTCTACTCAGCATGGGCAACGAC
GGGGCATGCCGGGTTCTTGACTACCTTCAGGGCAACACTTTCATGACAAT
TGAGAACAACGATCACCAGCTTTTCACGTCCGTGGCGTGGGACCTGGCCC
ACGAGCAGCTGGTGCTGGCGGACGCTTCGGGTGTGGTGCAAATTTGGAAC
ACCTACACGGAGTCGGGCAACACTTTCATGACAATTGAGAACAACGATCA
CCAGCTTTTCACGTCCGTGGCGTGGGACCTGGCCCACGAGCAGCTGGTGC
TGGCGGACGCTTCGGGTGTGGTGCAAATTTGGAACACCTACACGGAGTCG
CTTCTCCTTAAAGTAAAAGTGGCGAAGGCAGTCGCCTCCACCGGGCCTCG
CAAGGGCCAGACCTTAAAAGCGCTACTCGGTTTCCACTCCTCGAAGGCGG
ATGGCATGCTGTACGGCATGTCTCCCGCGGAGGGCTGCTTCTTCCAATGG
AAGATGCTTCTCCTTAAAGTAAAAGTGGCGAAGGCAGTCGCCTCCACCGG
GCCTCGCAAGGGCCAGACCTTAAAAGCGCTACTCGGTTTCCACTCCTCGA
AGGCGGATGGCATGCTGTACGGCATGTCTCCCGCGGAGGGCTGCTTCTTC
CAATGGAAGATGGTCAAAGCAGGCGGCAGCACCCTGATCGGGCGACACGA
CGACAGCATAGTTGGCCTAGGCTTCCAGCAAGCGTCGTCGTTGGCTGGGC
GAGAAACGTGCAATAACAGCGACACCGGTCTCGCCGAAGCAACGCCTGAC
GTCACCACCACGGCGGCAGGGCTCAAGCTCGACGACGACGACAGCGCGTT
CGTCCTCGAGGAAGCGGAGGAGGAGGAAGAAGAGGCGCGTGGAAGCTGCG
GCGGCGCACCCGTGACCAAGCCGGGCCGGCGAGGCGGTGCGAGCAGACTC
GGAGGCCAGAGCAGCAGCCGCCGCCGCCTCAGCGCGGGGGCTGGGGCTGC
AAGCGGCAGCCTCGGTGGTAGTGCACCAGGCGCAGGAAAGGAGGGCGCAG
AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAGGAGGAG
GCCGGGTTTGAGTCGGTGGTGCTGTCAGCTAGCATGGACGGCGTCGTAAG
GGCGTGGGAGATGCTCGGGAAGAGCGAGAAGTATCGCATGCGGCACCCGG
TGCCGGGGGTGGAGGTGACGAGCATGCTCGTGCTGCCGGGGGGGTCTGTC
TTGGCCACTGGTCAAAGCAGGCGGCAGCACCCTGATCGGGCGACACGACG
ACAGCATAGTTGGCCTAGGCTTCCAGCAAGCGTCGTCGTTGGCTGGGCGA
GAAACGTGCAATAACAGCGACACCGGTCTCGCCGAAGCAACGCCTGACGT
CACCACCACGGCGGCAGGGCTCAAGCTCGACGACGACGACAGCGCGTTCG
TCCTCGAGGAAGCGGAGGAGGAGGAAGAAGAGGCGCGTGGAAGCTGCGGC
GGCGCACCCGTGACCAAGCCGGGCCGGCGAGGCGGTGCGAGCAGACTCGG
AGGCCAGAGCAGCAGCCGCCGCCGCCTCAGCGCGGGGGCTGGGGCTGCAA
GCGGCAGCCTCGGTGGTAGTGCACCAGGCGCAGGAAAGGAGGGCGCAGAG
GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGC
CGGGTTTGAGTCGGTGGTGCTGTCAGCTAGCATGGACGGCGTCGTAAGGG
CGTGGGAGATGCTCGGGAAGAGCGAGAAGTATCGCATGCGGCACCCGGTG
CCGGGGGTGGAGGTGACGAGCATGCTCGTGCTGCCGGGGGGGTCTGTCTT
GGCCACTGGAACCGACGACGGGAGCGTACGATTCTGGCAGCTAGAGACTG
GGGCAGGAGAATCATTGAAACCCCACGAGAACACCGTCAGCGCTCTCGCG
GCGTGCAGGGATCGACAGGGGTCGTTGATACTCGCCAGCGCCGGCTTCGA
AGGCGTAATCGCCATATGGAGGGCGCATGCCAAGGACGGCTTCAACCGAC
ATCAAGAACCGACGACGGGAGCGTACGATTCTGGCAGCTAGAGACTGGGG
CAGGAGAATCATTGAAACCCCACGAGAACACCGTCAGCGCTCTCGCGGCG
TGCAGGGATCGACAGGGGTCGTTGATACTCGCCAGCGCCGGCTTCGAAGG
CGTAATCGCCATATGGAGGGCGCATGCCAAGGACGGCTTCAACCGACATC
AAGTCCCAACCGTGGACTTCTCCATTAGCCGCGCTCACGGCGCCGAAGAC
GGATCAGATGCCGAGGTTCTTTGTCTGGCGTTCGTGGCCGCGGATGCCCC
GTTGCTGGCCAGCGCGGGCAACGACCGTGTCGTGCGGTGTTGGGGTTTCC
GGGAGCATGCTTGCGTCTTGTTGGCGATGCTGGAGGTCCCAACCGTGGAC
TTCTCCATTAGCCGCGCTCACGGCGCCGAAGACGGATCAGATGCCGAGGT
TCTTTGTCTGGCGTTCGTGGCCGCGGATGCCCCGTTGCTGGCCAGCGCGG
GCAACGACCGTGTCGTGCGGTGTTGGGGTTTCCGGGAGCATGCTTGCGTC
TTGTTGGCGATGCTGGAGGGGCACAAGGATTCGATCGAGGCACTGGTCGC
GGATGGGTTGTTCCTTCTCAGCGGGAGCTGTGACGGGGTGGTCCGAGTGT
GGAACATCGCGAGTCTCGAGCACAAAGGGGCACAAGGATTCGATCGAGGC
ACTGGTCGCGGATGGGTTGTTCCTTCTCAGCGGGAGCTGTGACGGGGTGG
TCCGAGTGTGGAACATCGCGAGTCTCGAGCACAAAGACCAAAGCAGCTTC
GGCGAGAGCGCTAGCTTTAGCGCTACCAGCTGTCGTCGAGAAAACGGACC
ACCGGACGCCATCACGACGGTAGGGGAGATCCAAGCACACGCCAACGGGA
TCGCCGGCCTGGCCATCATGACCACCGGTGCGAGGCACAACAGTAGTAGC
CGCGCCGTTCTCGGCGAAGAGGGAGAAGAACAAGGACAGGTCGCGATGGG
AGGCTTGCTCGTGACGTGCGGCAACGCCGAGGGGATCGTCAAGATATGGG
ACTACACGCACGTGGAGGACGACGGCGGCTGCGGGAGGTAGACCAAAGCA
GCTTCGGCGAGAGCGCTAGCTTTAGCGCTACCAGCTGTCGTCGAGAAAAC
GGACCACCGGACGCCATCACGACGGTAGGGGAGATCCAAGCACACGCCAA
CGGGATCGCCGGCCTGGCCATCATGACCACCGGTGCGAGGCACAACAGTA
GTAGCCGCGCCGTTCTCGGCGAAGAGGGAGAAGAACAAGGACAGGTCGCG
ATGGGAGGCTTGCTCGTGACGTGCGGCAACGCCGAGGGGATCGTCAAGAT
ATGGGACTACACGCACGTGGAGGACGACGGCGGCTGCGGGAGGTAG
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