mRNA_S-firma_F_contig1006.123.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig1006.123.1 vs. uniprot
Match: D8LC79_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC79_ECTSI) HSP 1 Score: 1089 bits (2817), Expect = 0.000e+0 Identity = 584/891 (65.54%), Postives = 665/891 (74.64%), Query Frame = 1
Query: 1 MRLETVEVLALASEAAGSQHWSRNAARPRYSLSTRDVAERNFVHSFTCFDVAERVETDYDIVFAGRSNGTVVLWRMVPRNLFGGANKNDRVEETLVSSSPHRGAVTCLTHTRPGTYGSLVGPLVFSGSSDQTVKMWNAWDGAPFKETCLQTLAEHRGGVTSLSFAGDTTLISAARDGSVRLWRQQRGRKLLKFPFFCCVKCLSMYP-AVRVGVSQPIGKLNFDQPGTTVGAWPTAMCVAGGEAWTLYCGDSEGTVSVFQRSPVSASERVASAKRRPDSLTMEQLADNEVSLCRRWAHLHSLAITGLVLVPEHNFLLSMGNDGACRVLDYLQGNTFMTIENNDHQLFTSVAWDLAHEQLVLADASGVVQIWNTYTESLLLKVKVAKAVASTGPRKGQTLKALLGFHSSKADGMLYGMSPAEGCFFQWKMVKAGGSTLIGRHDDSIVGLGFQQASSLAGRETCNNSDTGLAEATPDVTTTAAGLKLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGFESVVLSASMDGVVRAWEMLGKSEKYRMRHPVPGVEVTSMLVLPGGSVLATGTDDGSVRFWQLETGAGESLKPHENTVSALAACRDRQGSLILASAGFEGVIAIWRAHAKDGFNRHQVPTVDFSISRAHGAEDGSDAEVLCLAFVAADAPLLASAGNDRVVRCWGFREHACVLLAMLEGHKDSIEALVADGLFLLSGSCDGVVRVWNIASLEHKDQSSFGESASFSATSCRRENGPPDAITTVGEIQAHANGIAGLAIMTTGARHNSSSRAVLGEEGEEQGQVAMGGLLVTCGNAEGIVKIWDYTHVEDDGGCGR 2670
M LE VEVLALA E A HWSRN ARPRYSL T + + +F HSFTCFDVAERVE D+DIVFAGRSNG VVLWRMV RN+FGGANKNDRV+E L+++SPHRGAVTCLTHTR GTYGSL+GPL+FSGS+D TVK+WNAW G PFKE CLQT+AEHRGGVT+L+FAGDTTLIS ARDGSVRLWR QRGRKLL+FPFFCCVKCLS+YP AV G+S+ IG QPG V WPTA CVAGGE WT YCGDS GTVSVFQR+P SA++R+A+A++ D LTM QLAD+EV+L RRW HLHSLAITGLVLV EHNFLLS+GNDGACRVLDYLQGNTFMTIE++ H LFTSVAWDLAHEQLVLADASGVVQ+WNTYTESLLLK KVAKAV GPRKGQ+LKAL+GFHSSKADGM+YGMSP+EGCFF+WK+VKA S LIGRHDDSI+GLGFQ AS+ R ++D G+ DV AG + XXXXXXXXXXXXXXXXXX AGF VVLSASM+GV+RAWE LGKSEKY MRH GVEVTSMLVLPGGSVL TGTDDGSVRFWQL+TGAGES + H+NTVSALAA RD+ GSL+LASAGFEG I IWRAHAKDG + +VPTVD+ + AHGA DG D E+LCLAFVA+D P+LASAGNDRVVRCW RE C+LL +LEGH+DSIEALV+DGLFL SGSCDG VR+WN+++L H+D S G+++ R E VG +AH NG++G+A+MT+ R++ G E +E G GL+ TCG AEGIVKIWDYTHVEDDG CGR
Sbjct: 1 MHLEVVEVLALAGEGAAGSHWSRNTARPRYSLGTDEAKQASFHHSFTCFDVAERVEADHDIVFAGRSNGAVVLWRMVARNMFGGANKNDRVQEPLITASPHRGAVTCLTHTRQGTYGSLIGPLMFSGSADHTVKVWNAWAGPPFKEACLQTMAEHRGGVTALAFAGDTTLISTARDGSVRLWRPQRGRKLLRFPFFCCVKCLSVYPTAVGRGMSRSIGA---GQPGAFVHVWPTAACVAGGETWTFYCGDSNGTVSVFQRAPTSAAKRLANARKTSDILTMNQLADDEVTLHRRWTHLHSLAITGLVLVAEHNFLLSVGNDGACRVLDYLQGNTFMTIESDGHSLFTSVAWDLAHEQLVLADASGVVQVWNTYTESLLLKKKVAKAVTYIGPRKGQSLKALMGFHSSKADGMMYGMSPSEGCFFRWKLVKAESSVLIGRHDDSILGLGFQGASAFPSRRNAPSNDGGI-----DV----AGRAGNVQKLEDRSEKKNVYESDGSCTAVVGTTCKELEGTGLESDGDKRPTDQRGSHGSMGGVAEIHNSDTEASEEXXXXXXXXXXXXXXXXXXEAGFGLVVLSASMNGVIRAWETLGKSEKYCMRHS-GGVEVTSMLVLPGGSVLVTGTDDGSVRFWQLDTGAGESFQAHDNTVSALAAYRDQLGSLVLASAGFEGAIIIWRAHAKDGLKKDRVPTVDYCVRDAHGALDGLDGEILCLAFVASDVPVLASAGNDRVVRCWRLRERTCILLLVLEGHEDSIEALVSDGLFLFSGSCDGAVRIWNVSNLGHEDNVSLGDNSRHRGEMGRTET------MMVGAFKAHPNGVSGMAVMTS-ERNSRVDVVYAGRESQEAG-----GLIATCGKAEGIVKIWDYTHVEDDGTCGR 866
BLAST of mRNA_S-firma_F_contig1006.123.1 vs. uniprot
Match: A0A6H5JSR9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSR9_9PHAE) HSP 1 Score: 266 bits (680), Expect = 4.950e-78 Identity = 132/180 (73.33%), Postives = 149/180 (82.78%), Query Frame = 1
Query: 1720 AGFESVVLSASMDGVVRAWEMLGKSEKYRMRHPVPGVEVTSMLVLPGGSVLATGTDDGSVRFWQLETGAGESLKPHENTVSALAACRDRQGSLILASAGFEGVIAIWRAHAKDGFNRHQVPTVDFSISRAHGAEDGSDAEVLCLAFVAADAPLLASAGNDRVVRCWGFREHACVLLAMLE 2259
AGF VVLSAS++GV+RAWE LGKSEKY MRH G EVTSMLVLPGGSVL TGTDDGSVRFWQL+TGAGES K H+NTVSALAA RD+ GSL+LASAGFEG I IWRAHAKDG + +VPTV++ + AHG DG D E+LCLAFVA+D P+LASAGNDRVVRCW RE C+LL +LE
Sbjct: 91 AGFGLVVLSASLNGVIRAWETLGKSEKYCMRHS-GGAEVTSMLVLPGGSVLVTGTDDGSVRFWQLDTGAGESFKAHDNTVSALAAYRDQLGSLVLASAGFEGAIIIWRAHAKDGLKKDRVPTVEYCVRDAHGVLDGLDGEILCLAFVASDVPVLASAGNDRVVRCWRLRERTCILLLVLE 269
BLAST of mRNA_S-firma_F_contig1006.123.1 vs. uniprot
Match: A0A835ZBD8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBD8_9STRA) HSP 1 Score: 196 bits (499), Expect = 4.250e-48 Identity = 215/898 (23.94%), Postives = 300/898 (33.41%), Query Frame = 1
Query: 277 ETLVSSSPHRGAVTCLTHTRPGTYGSLVGP------------------------LVFSGSSDQTVKMWNAWDGAPFKETCLQTLAEHRGGVTSLSFA----------------GDTTLISA-------------------------ARDGSVRLWRQQRGRKLLKFPFFCCVK-----CLSMYPAVRV-------GVSQPIGKLNFDQPGTTVGAWPTAMCVAGGEAWTLYCGDSEGTVSVFQR-----------------------SPVSASERVASAKRRPDSLTMEQLADNEVSLCRRWAHLHSLAI--------------TGLVLVPEHNFLLSMGNDGACRVLDYLQGNTFMTIENNDHQ------------------------LFTSVAWDLAHEQLVLADASGVVQIWNTYTESLLLKVKVAKAVASTGPRKGQTLKALLGFHSSKA--------DGMLYGMSPAEGCF-------------------FQWK--------------------------MVKAGGSTLIGRHDDSIVGLGFQQASSLAGRETCNNSDTGLAEATPDVTTTAAGLKLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGFESVVLSASMDGVVRAWEMLGKSEKYRMR------------------------------------------HPVPGVEVTSMLVLPGGSVLATGTDDGSVRFWQLETGAGESLKPHENTVSALAACRDRQ-GSLILASAGFEGVIAIWRAHAKDGFNRHQVPTVDFSISRAHGAEDGS-----------------DAEVLCLAFVAADAPLLASAGNDRVVRCW 2217
E L ++ PH GAV C+ HT G L LV SG +D VK+W+ W+G +ETCLQT +HRG VT+L+F GD +L+S +RDG++R+WR Q GRKLL PFFCC + L+ +PA G+S L + + PT + V G E WT + VS +R+ SA E + +V +RW LH+L T L +V EH FL S G DG RVLD +G +FM + + ++T +AWDL HEQL+L D G V++WN Y E+LLL+ +VA+ +A G R G + L G S A D ++Y +SPA W+ + + G +G H D++ + QQ + A A + A A V++ S+D VRAW+ G + +R E+ +LP G VLA GT+ G V+FW L T H NTVSA+AA D G ++LA+ ++G +A+W HAKDG +++P ++ ++ AHG D S D EVL LAFV A LLAS GND VRCW
Sbjct: 124 EGLSTARPHSGAVRCIAHTPAGGCAMLXXXXXXXXXXXXXXXXXXXXXXXXXRALVASGGADHAVKIWDPWEGLG-RETCLQTFTKHRGAVTALAFLLXXXXXXXXXXXXXXMGDGSLLSCFAXXXXXXXXXXXXXXXXXXXXXXXSRDGTLRVWRLQDGRKLLLNPFFCCARVIGAAALNAHPAPGAIAPWRARGLSAASPLLWIVELQRSAANAPTVLAVWGSEGWTAXXXXXXXXXXXXXAYVVXXXXXXXXXXXXXXXXXXXXTHVSPGDRLESAGAGALGAKGEHMPSYQVHATKRWERLHALGXXXXXXXXXXXXXXXTALAVVAEHGFLCSAGADGRARVLDLARGTSFMDLHHPVRGRGXXXXXXXXXXXXXXXXXGARAGVYTGLAWDLRHEQLILCDGFGNVEVWNAYAETLLLRKRVARPLAPRGARAGDAVPGLSGVRVSAAGVRVSTAEDTVVYALSPAAXXXXXXXXXXXXXXXXXXXXRALHWRRSTTRSRXXXXXXXXXXXXXXXXXCRLTERRGCRRLGAHGDAVTAILTQQPRTXXXXXXXXXXXXXXATAADADGSDGAA-----------------------------------------------------------------------------------------RGASAAQHCSVMTVSLDSTVRAWDADGDARGWRSSASXXXXXXXXXXXXXXXXXXXWQRVQKRKSAXXXXXXXXXXXRAAADAELACACLLPVGRVLAAGTEAGDVQFWMLGTSTCTVHAAHANTVSAIAAGEDASCGDILLATGSYDGDLALWGLHAKDGPVANRLPKLEQRVAGAHGRRDASLSAAAAATPLSDAAALVDTEVLALAFVGR-AGLLASGGNDGAVRCW 930
BLAST of mRNA_S-firma_F_contig1006.123.1 vs. uniprot
Match: A0A662WIJ9_9STRA (TrmE-type G domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WIJ9_9STRA) HSP 1 Score: 147 bits (371), Expect = 1.270e-32 Identity = 108/352 (30.68%), Postives = 176/352 (50.00%), Query Frame = 1
Query: 367 LVFSGSSDQTVKMWNAWDGA----PFKET--CLQTLAEHRGGVTSLSFAGDTT--LISAARDGSVRLWRQQRGRKLLKFPFFCCVKCLSMYPAVRVGVSQPIGKLNFDQPGTTVGAWPTAMCVAGGEAWTLYCGDSEGTVSVFQRSPVSASERVASAKRRPDSLTMEQLADNEVSLCRRWAHLHSLAITGLVLVPEHNFLLSMGNDGACRVLDYLQGNTFMTIENNDHQLFTSVAWDLAHEQLVLADASGVVQIWNTYTESLLLKVK--VAKAVASTGPRKGQTLKALLGFHSSKADGMLYGMSPAEGCFFQWKMVKAGGSTLIGRHDDSIVGLGFQQASSLAGRETCNNSD 1392
L+F+GS+D+++K+W+ W GA P + + C+QTL EH G V + L+S + D +V+ W GR LL +P+F PA + QPGT WP+ +CV G + TL+ GDS G +SV+ S S + + L + + + L R+++H HSL I+ L LV ++ F++S+G D +V+D + G +TI N FTS +WD + L+L D++G VQ+W+ + + L+ K K V+ +A G + L+G ++ D +L G+ A G QW + + G H D+IV + S +CN++D
Sbjct: 245 LLFTGSADRSIKVWDPWGGAETPLPTRSSYSCVQTLIEHSGSVVCVQVMTQQKHGLVSCSLDHTVKTWYPAEGRALLLYPWFL--------PAQSIA-----------QPGTN---WPSTLCVRSGASDTLFVGDSGGCISVYTSSATSMDSDTMLDLQHDEPLGGQSDSRFQFRLKRKYSHFHSLGISSLQLVADNCFVVSLGFDEKAQVIDAISGVLSLTISNASGARFTSCSWDSPSQLLLLGDSTGFVQVWDIFEDKLVGKKKMVVSPPLAIAG------IYVLIG--AAAGDFLLTGL--ANG-MKQWLINRDVGYRNCSGHSDAIVAVAVINGDSTG---SCNDAD 560
BLAST of mRNA_S-firma_F_contig1006.123.1 vs. uniprot
Match: A0A0G4INE9_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4INE9_PLABS) HSP 1 Score: 143 bits (361), Expect = 7.720e-32 Identity = 108/393 (27.48%), Postives = 183/393 (46.56%), Query Frame = 1
Query: 184 VFAGRSNGTVVLWRMVPRNLFGGANKNDRVEETLVSS---SPHRGAV---TCLTHTRPGTYGSLVGPLVFSGSSDQTVKMWNAWDGAPFKETCLQTLAEHRGGVTSLSFAGDTTLISAARDGSVRLWRQQRGRKLLKFPFFCCVKCLSMYPAVRVGVSQPIGKLNFDQPGTTVGAWPTAMCVAGGEAWTLYCGDSEG--TVSVFQRSPVSASERVASAKRRPDSLTMEQLADNEVSLCRRWAHLHSLAITGLVLVPEHNFLLSMGNDGACRVLDYLQGNTFMTIENNDHQLFTSVAWDLAHEQLVLADASGVVQIWNTYTESLLLKVKVAKAVASTGPRKGQTLKALLGFHSSKADGMLYGMSPAEGCFFQWKMVKAGGSTLIGRHDDSIVGL 1338
+ G S+G +++W+ +K + T+V S H+G + C+ R T +VFSGS+D+T++MWN W + C+QTL H G VTS+ + + TLIS++ D ++R+WR Q R + +P++ C + +S G W ++ + G+A TL+ GD +G +S +Q ++ +Q+ + CR HLH I+ ++ VP+ NF++++ D +V D GN F +EN + +T VAWD A ++++L DA G +Q+WN Y E L V++ R+G+ + + HS D ++ G A+ C W + + S H IVGL
Sbjct: 44 LMVGISSGDILVWK----------SKKSYSQTTMVQGRVLSGHKGRIWVMKCVPLPRSTTIH-----VVFSGSADRTIRMWNPWVPETDRP-CIQTLVGHNGTVTSIEY-DNGTLISSSTDHTIRVWRPQDERAITTYPWYICTQVVS-----------------------ESGDWVNSLSIRPGDAMTLFVGDGKGRWNLSAYQ------------------AMGRQQM----LKQCRPKQHLHERGISHVLFVPQENFVVTLSFDNTVQVHDASNGNGFFAVENPNRCRYTGVAWDHARQEMLLVDAIGYLQVWNVYMEKCLKVVRI---------RRGELHQ--ISVHSD--DLIVVG---AQECVEVWNVHRQVQSRECQGHTGPIVGL 358
BLAST of mRNA_S-firma_F_contig1006.123.1 vs. uniprot
Match: A0A2P4YF63_9STRA (WD40 repeat-like protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YF63_9STRA) HSP 1 Score: 141 bits (356), Expect = 3.340e-31 Identity = 116/401 (28.93%), Postives = 188/401 (46.88%), Query Frame = 1
Query: 184 VFAGRSNGTVVLWRMVPRNLFGGANKNDRVEETLVSSSPHRGAVTCLTHTRPGTYGSLVGP--LVFSGSSDQTVKMWNAWDG--APF----KETCLQTLAEHRGGVTSLSFAGDTT--LISAARDGSVRLWRQQRGRKLLKFPFFCCVKCLSMYPAVRVGVSQPIGKLNFDQPGTTVGAWPTAMCVAGGEAWTLYCGDSEGTVSVFQRSPVSASERVASAKRRPDSLTMEQLADN-----EVSLCRRWAHLHSLAITGLVLVPEHNFLLSMGNDGACRVLDYLQGNTFMTIENNDHQLFTSVAWDLAHEQLVLADASGVVQIWNTYTESLLLKVKVAKAVASTGPRKGQTLKALLGFHS----SKADGMLYGMSPAEGCFFQWKMVKAGGSTLIGRHDDSI 1329
+F GR +G ++ W + P + T+ H GAV L + +GP L+FSGS+D+++K+W+ W G P + C+QTL+EH G V L + +IS + D +V+ W GR LL +P++ + +S QPG++ WP+A CV G TL+ GDS G +SV+ S A+E V D + +QL D+ + +L R+++H HSL I+ L +V ++ F++S+G D +++D + G TI + F S WD + L+L D +G V +WN + + LL + + + +T P A++G HS S D +L G + QW + G H DS+
Sbjct: 19 IFGGRHDGAIMHWPISPT-----PSVTTPCANTMRG---HAGAVLTLD------FAPDLGPEGLLFSGSADRSIKIWDPWGGLDTPLPSRNRYACVQTLSEHCGSVVCLRVLTHQSHAIISCSLDRTVKTWYPTEGRGLLLYPWYLPAQSIS-------------------QPGSS---WPSAFCVRSGANGTLFIGDSAGGISVYANSSGKANEIVPDNA--IDIVDYKQLGDHFDEKFQWALRRKFSHFHSLGISKLQVVADNCFVVSLGFDEKAQIIDAISGALSATISSAGAARFISCTWDDQGQILLLGDVAGYVHLWNMFDDKLLAR----RQMITTAPL------AIVGMHSFTGTSGGDFLLIGQASGVK---QWLCNRNVGYVNCNGHSDSV 368
BLAST of mRNA_S-firma_F_contig1006.123.1 vs. uniprot
Match: A0A329SJX5_9STRA (tRNA modification GTPase n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SJX5_9STRA) HSP 1 Score: 140 bits (352), Expect = 4.330e-30 Identity = 116/407 (28.50%), Postives = 191/407 (46.93%), Query Frame = 1
Query: 184 VFAGRSNGTVVLWRMVPRNLFGGANKNDRVEETLVSSSPHRGAVTCLTHTRPGT---YGSLVGP--LVFSGSSDQTVKMWNAWDG----APFKE--TCLQTLAEHRGGVTSLSFAGDTT--LISAARDGSVRLWRQQRGRKLLKFPFFCCVKCLSMYPAVRVGVSQPIGKLNFDQPGTTVGAWPTAMCVAGGEAWTLYCGDSEGTVSVFQRSPVSASERVASAKRRPDSLTMEQLADN-----EVSLCRRWAHLHSLAITGLVLVPEHNFLLSMGNDGACRVLDYLQGNTFMTIENNDHQLFTSVAWDLAHEQLVLADASGVVQIWNTYTESLLLKVKVAKAVASTGPRKGQTLKALLGFHS----SKADGMLYGMSPAEGCFFQWKMVKAGGSTLIGRHDDSIVGL 1338
+F GR +G ++ W + P T+ S++ RG HTR + +GP L+FSGS+D+++K+W+ W G P K C+QTL EH G V + ++S + D +V+ W GR LL +P++ + +S QPG++ WP+A+CV G TL+ G+S G +SV+ S +E + D++ +QL+D L R+++H HSL I+ L ++ ++ F++S+G D +V+D + G TI + F S WD L+L DA+G + +WN + + L+ K K + ST P A++G HS + D +L G+ A G QW + G H D++V +
Sbjct: 566 IFGGRHDGAIMHWGLSPSQ-----------SVTIPSANTMRG------HTRAVITLDFAPDLGPEGLLFSGSADRSIKIWDPWGGNDTPLPTKSGYACVQTLTEHSGSVVCVRILAQQNHGIVSCSLDRTVKTWYPAEGRALLLYPWYLPAQSIS-------------------QPGSS---WPSALCVRSG---TLFVGNSAGVISVYAHS--CDNENAVVPESVLDTVDDKQLSDQLDTRFHFGLKRKFSHFHSLGISSLQMIADNCFVVSLGYDEKAQVIDAISGALSSTICSASAARFISCTWDERGHILLLGDAAGYIHLWNIFEDKLVGK----KQMVSTMPL------AIVGMHSLSDTAAGDFLLTGL--ANGVK-QWLCNRNVGYVNCSGHSDAVVAV 915
BLAST of mRNA_S-firma_F_contig1006.123.1 vs. uniprot
Match: G4YZT3_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YZT3_PHYSP) HSP 1 Score: 136 bits (343), Expect = 1.560e-29 Identity = 127/419 (30.31%), Postives = 190/419 (45.35%), Query Frame = 1
Query: 184 VFAGRSNGTVVLWRMVPRNLFGGANKNDRVEETLVSSSP---HRGAVTCLTHTRPGTYGSLVGP--LVFSGSSDQTVKMWNAWDGA----PFKE--TCLQTLAEHRGGVTSLS-FAGDTTLISAARDGSVRLWRQQRGRKLLKFPFFCCVKCLSMYPAVRVGVSQPIGKLNFDQPGTTVGAWPTAMCVAGGEAWTLYCGDSEGTVSVFQRSPVSASERVASAKRRPDSLTMEQLADNEVSLCRRWAHLHSLAITGLVLVPEHNFLLSMGNDGACRVLDYLQGNTFMTIENNDHQLFTSVAWDLAHEQLVLADASGVVQIWNTYTESLLLKVKVAKAVASTGPRKGQTLKALLGFHS----SKADGMLYGMSPAEGCFFQWKMVKAGGSTLIGRHDDSIVGLGFQQAS-SLAGRETCNNS 1389
+F GR +G ++ W + + T+ S++ H GAV L + +GP L+FSGS+D+++K+W+ W GA P K C+QTL EH G V L +IS + D +V+ W GR LL +P++ PA + QPG+ WP+A CV G TL+ GDS G +S D + M+ + SL R+++H HSL I+ L +V + F++S+G D +++D + G TI + FTS AWD + L+L DA+G V +WN + + LL K K+ A+ ++G HS D +L G+ A G QW + G G H DSI+ FQ S SL G C +S
Sbjct: 50 IFGGRHDGAIMHWPI-----------SQAPSVTIPSANTLRGHTGAVLTLD------FAPELGPEGLLFSGSADRSIKIWDPWGGADSSLPTKGGYACVQTLTEHCGSVVCLRVLTRSHGIISCSLDRTVKTWYPAEGRALLLYPWYL--------PAQSIL-----------QPGS---CWPSAFCVRSGANGTLFIGDSGGGISQLG-----------------DQVDMKF----QFSLKRKFSHFHSLGISKLEIVADSCFVVSLGFDEKAQIIDAISGALSSTICSASAARFTSCAWDDRGQILLLGDAAGYVHLWNIFEDKLLGKKKMVAAMPL----------GIVGMHSLTGIPAGDFLLTGL--ANGVK-QWICNRNVGYVSCGGHSDSILTKTFQFFSASLDGSIRCWDS 395
BLAST of mRNA_S-firma_F_contig1006.123.1 vs. uniprot
Match: D0NJH3_PHYIT (Uncharacterized protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NJH3_PHYIT) HSP 1 Score: 135 bits (341), Expect = 2.180e-29 Identity = 113/404 (27.97%), Postives = 176/404 (43.56%), Query Frame = 1
Query: 184 VFAGRSNGTVVLWRMVPRNLFGGANKNDRVEETLVSSSPHRGAVTCLTHTRPGTYGSLVGP--LVFSGSSDQTVKMWNAWDG----APFKE--TCLQTLAEHRGGVTSLSFAGDTT--LISAARDGSVRLWRQQRGRKLLKFPFFCCVKCLSMYPAVRVGVSQPIGKLNFDQPGTTVGAWPTAMCVAGGEAWTLYCGDSEGTVSVFQRSPVSASERVASAKRRPDSLTMEQLADNEVSLCRRWAHLHSLAITGLVLVPEHNFLLSMGNDGACRVLDYLQGNTFMTIENNDHQLFTSVAWDLAHEQLVLADASGVVQIWNTYTESLLLKVKVAKAVASTGPRKGQTLKALLGFHSSKADGMLYGMSPAEGC---FFQWKMVKAGGSTLIGRHDDSIVGLGFQQAS 1356
+F GR +G ++ W ++ + H GAV L + S +GP L+FSGS+D+++K+W+ W G P K TC+QTL EH G V + L+S + D +V+ W GR LL +P+F + +S QPG++ WP+A+C+ G TL+ GDS G +SV Q + L R+++H HSL I+ L LV ++ F++S+G D +V+D + G TI + F S +WD + L+L D +G V +W + + L+ K ++ T A++G +S G L G G QW + G H D+IVG+ F AS
Sbjct: 46 IFGGRHDGAIMHWPIL--------QSQSLTTPCANTMRGHTGAVLTLD------FASDLGPGGLLFSGSADRSIKIWDPWSGNGTPLPTKSSHTCVQTLTEHCGSVVCVQILAQQNHGLVSCSLDRTVKTWYPAEGRALLLYPWFLPAQSIS-------------------QPGSS---WPSALCIRSG---TLFVGDSAGGISVDQTD-----------------------TRFQFGLKRKFSHFHSLGISRLELVADNCFVVSLGYDEKAQVIDAISGALSATIRSASGARFLSCSWDEQDQVLLLGDVAGCVHLWTIFEDKLIGKRQIVS----------MTPLAIVGMYS--LSGTLAGEFLLTGLANGVKQWLCNRNVGYVNCSGHSDAIVGIVFFSAS 375
BLAST of mRNA_S-firma_F_contig1006.123.1 vs. uniprot
Match: A0A833WXG3_PHYIN (WD domain G-beta repeat n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833WXG3_PHYIN) HSP 1 Score: 135 bits (341), Expect = 2.620e-29 Identity = 108/364 (29.67%), Postives = 172/364 (47.25%), Query Frame = 1
Query: 301 HRGAVTCLTHTRPGTYGSLVGP--LVFSGSSDQTVKMWNAWDG----APFKE--TCLQTLAEHRGGVTSLSFAGDTT--LISAARDGSVRLWRQQRGRKLLKFPFFCCVKCLSMYPAVRVGVSQPIGKLNFDQPGTTVGAWPTAMCVAGGEAWTLYCGDSEGTVSVFQRSPVSASERVASAKRRPDSLTMEQLADN-----EVSLCRRWAHLHSLAITGLVLVPEHNFLLSMGNDGACRVLDYLQGNTFMTIENNDHQLFTSVAWDLAHEQLVLADASGVVQIWNTYTESLLLKVKVAKAVASTGPRKGQTLKALLGFHSSKADGMLYGMSPAEGC---FFQWKMVKAGGSTLIGRHDDSIVGL 1338
H GAV L + S +GP L+FSGS+D+++K+W+ W G P K TC+QTL EH G V + L+S + D +V+ W GR LL +P+F + +S QPG++ WP+A+C+ G TL+ GDS G +SV+ S S++ ++ D + + +D + L R+++H HSL I+ L LV ++ F++S+G D +V+D + G TI + F S +WD + L+L D +G V +W + + L+ K ++ T A++G +S G L G G QW + G H D+IVG+
Sbjct: 4 HTGAVLTLD------FASDLGPGGLLFSGSADRSIKIWDPWSGNGTPLPTKSSHTCVQTLTEHCGSVVCVQILAQQNHGLVSCSLDRTVKTWYPAEGRALLLYPWFLPAQSIS-------------------QPGSS---WPSALCIRSG---TLFVGDSAGGISVYSHS--SSNNHAIVSETILDLVDDKYQSDQTDTRFQFGLKRKFSHFHSLGISRLELVADNCFVVSLGYDEKAQVIDAISGALSATIRSASGARFLSCSWDEQDQVLLLGDVAGCVHLWTIFEDKLIGKRQIVS----------MTPLAIVGMYS--LSGTLAGEFLLTGLANGVKQWLCNRNVGYVNCSGHSDAIVGI 322 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1006.123.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig1006.123.1 >prot_S-firma_F_contig1006.123.1 ID=prot_S-firma_F_contig1006.123.1|Name=mRNA_S-firma_F_contig1006.123.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=891bp MRLETVEVLALASEAAGSQHWSRNAARPRYSLSTRDVAERNFVHSFTCFDback to top mRNA from alignment at S-firma_F_contig1006:55..6164- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig1006.123.1 ID=mRNA_S-firma_F_contig1006.123.1|Name=mRNA_S-firma_F_contig1006.123.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=6110bp|location=Sequence derived from alignment at S-firma_F_contig1006:55..6164- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig1006:55..6164- >mRNA_S-firma_F_contig1006.123.1 ID=mRNA_S-firma_F_contig1006.123.1|Name=mRNA_S-firma_F_contig1006.123.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=5346bp|location=Sequence derived from alignment at S-firma_F_contig1006:55..6164- (Sphaerotrichia firma ET2_F female)back to top |