mRNA_S-firma_F_contig10059.122.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10059.122.1 vs. uniprot
Match: D8LI22_ECTSI (Importin subunit alpha n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI22_ECTSI) HSP 1 Score: 802 bits (2071), Expect = 3.370e-281 Identity = 469/600 (78.17%), Postives = 504/600 (84.00%), Query Frame = 1
Query: 1 MPPKNRDSKPLLLQNQTQKRRDRAQELRSARRQGVLAKRRKFDAPSVTTAAVHQGSTSAGAGGALFSQQEREAEPWSREKLAVAIQGVRERPVSEVLPYLVELRKLLSLEDPPVEEVVEGGGLAPRLMELLSTANDQIQMETTWCLTNIASSYSRHTRTILGAXXXXXXXXXXXXXXXXXXXXXXXXXXXGDSGDFREMLHANGALLPTLRLLQHPPSVEIARTAAWAVSNLARGDGTPGTPFLAAAPVFVASLRGGVSFSAAAEAVAAAG---------AAAVLPPRDEALRVEAAWILAFLTAKETETVSELVRVGMVPALVEALVDSGGKDPLCTPALRTLGNMVSGNEAWADAVMVHKEFLPCLDAVLKNQDKSRRVLVKEAAWVASNVAAGRPEHRDALVKQGSPAALTSLLQSDQLDLQQEAAHGIWNIVAHDQELLLQAARDDRVLGAYVTLVRAQSPPVVRCALSFLQLVCQNVPDGPRRVESSGGLEAIDDVHYSGQADPELQEAAGSIVDRFFGEDGYESSDEGGDEETDTETAVSGGEGFSF-----GDSSASTTVRSFGQQQQPQQPLAPLGRGSHLTRPAWMNQNPS 1758
MPPKNR+SKPLLL+NQT KRRDRAQELRSARRQGVLAKRR AGGA S Q ++ EPWSRE+L AI+GVRERPVS+VLP+LVELRKLLSLEDPPVEEVVEGGGLAPRL+ELLST +D++Q+ETTWCLTNIASSYSRHTRTI+GA XXXXXXXXXXXXXXXXXXXXXXXXXX DFR ML ANGALLP RLLQ+PP +EIARTAAWA+SNLARGD TPG PF+ AAP FVASLRGGV FSAAA A +PPRDEALRVEAAWILAFLTAKE ETV+ELVRVGMV ALVEALVDSGG+DPLCTPALRTLGNMVSG E WADAVM+H EFLPCLDAVLK+QD+SRRVLVKEAAWVASNVAAGR EHR+ALV QGSPAALT LL SDQLDLQQEAAHGIWNIVAHD ELLLQAA+DDRV+GAYV LVRAQSPPVVRCALSFLQLVCQNVP GPR VES+GGLEAIDDVHYSGQADPELQEAAG+IVDRFFG+DGYESSDEGGDEETDTET V GG+GF F GD+S + GQ QPLAPLGRG+HLTRP+WMNQNPS
Sbjct: 1 MPPKNRESKPLLLENQTHKRRDRAQELRSARRQGVLAKRRV-------------------AGGA--SAQGQQEEPWSRERLESAIRGVRERPVSQVLPFLVELRKLLSLEDPPVEEVVEGGGLAPRLIELLSTPHDEVQLETTWCLTNIASSYSRHTRTIVGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDFRRMLRANGALLPMFRLLQNPPLIEIARTAAWAISNLARGDETPGEPFVQAAPTFVASLRGGVRFSAAAXXXXXXXXXXXXXXXXAPPFVPPRDEALRVEAAWILAFLTAKEEETVTELVRVGMVTALVEALVDSGGQDPLCTPALRTLGNMVSGKEEWADAVMLHNEFLPCLDAVLKSQDRSRRVLVKEAAWVASNVAAGRREHREALVAQGSPAALTLLLLSDQLDLQQEAAHGIWNIVAHDSELLLQAAKDDRVMGAYVALVRAQSPPVVRCALSFLQLVCQNVPGGPRMVESAGGLEAIDDVHYSGQADPELQEAAGAIVDRFFGDDGYESSDEGGDEETDTETVVGGGDGFGFNFGGSGDTSQNGARGPPGQXXXXXQPLAPLGRGAHLTRPSWMNQNPS 579
BLAST of mRNA_S-firma_F_contig10059.122.1 vs. uniprot
Match: A0A835YTV7_9STRA (Importin subunit alpha n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTV7_9STRA) HSP 1 Score: 279 bits (714), Expect = 1.030e-79 Identity = 212/600 (35.33%), Postives = 299/600 (49.83%), Query Frame = 1
Query: 25 KPLLL-QNQTQKRRDRAQELRSARRQGVLAKRRKFDAPSVTTAAVHQGSTSAGAGGALFSQQEREAEPWSREKLAVAIQGVRERPVSEVLPYLVELRKLLSLE-DPPVEEVVEGGGLAPRLMELLSTANDQIQMETTWCLTNIASSYSRHTRTILGAXXXXXXXXXXXXXXXXXXXXXXXXXXXGDSGDFREMLHANGALLPTLRLL----QHPP---SVEIARTAAWAVSNLARGDGTPGTPFLAAAPVFVASLRGGVSFSAAAEAVAAAGAAAVLPPRDEALRVEAAWILAFLTAKETETVSELVRVGMVPALVEALV----------DSGGKDPLCTPALRTLGNMVSGNEAWADAVMVHKEFLPCLDAVLKNQDKSRRVLVKEAAWVASNVAAGRPEHRDALVKQGSPAALTSLLQSDQLDLQQEAAHGIWNIVAHD------QELLLQAARDDRVLGAYVTLVRAQSPPVVRCALSFLQLVCQNVPDGPRRVESSGGLEAIDDVHYSGQADPELQEAAGSIVDRFFGEDGYESSDEGGDEETDTETAVSGGEGFSFGDSSASTTVRSFGQQQQPQQPLAPLGRGSHLTRPAWMNQ 1749
KP+L ++QT +RR+RA++L + +R G LAKRR+ PS A + + S A A +++ E L A+ G+ P LP+L LRK+LS E DPP++ V++ G + PRL+ LL +D+ +++ C+ NI S T +L A GD R++L A GA+ R+L +H S +A AAWA+ NLARG+G PF A+ A A VA G A R E EAAW LAFLTA+E V +L+ +G+VPALV+ L +S TPALRTLGN+ +G +AW ++ +FLP L V+ +QD + +VKEAAW+ S++ G RDA++ G LL+S Q DLQ+EAA +WNIVA Q+ L + VL A+V L+R V ALS+++LVC+ VP+G R VE +GGLEAID++HY G DP + A +IVD+FFGED YE E++ + A G +GRG HLT PAWM++
Sbjct: 10 KPMLAPESQTHRRRERAKQLSAIKRDGALAKRRRSLEPSSVAMAADEEAPSTAA--AEYTEAE----------LKEALAGLAGPPAG-ALPHLAALRKMLSSEEDPPIQAVIDAGAV-PRLLALLEHPDDRYKLDAVRCIANIGSGDRHATSHVLDAAPALIALLHAPSPALVEDALWALGNIAGDVQTSRDVLSAQGAVPAITRVLAAQTRHAATRSSAPLAAVAAWALGNLARGEGASALPFGAS--------------GAFAPLVALLGVAPGAGERGENAAAEAAWALAFLTAREDACVEQLLGLGVVPALVDLLARGTQDHSSAKESAAAVAAMTPALRTLGNLAAGPDAWVAQLLSQPKFLPSLAQVVASQDPTHHAMVKEAAWLVSSLVGGHASCRDAVLAAGFLVPTLDLLRSGQFDLQREAARAVWNIVADAANSAGAQQALQAVTAEPGVLAAFVALLRVPDMETVAVALSYVRLVCERVPEGSRAVERAGGLEAIDELHY-GPVDPAISAQAAAIVDKFFGED-YE-------EDSTAQPAAPAPADIGHG-----------------------MGRGKHLTEPAWMHK 549
BLAST of mRNA_S-firma_F_contig10059.122.1 vs. uniprot
Match: A0A3S6N0U7_9SPER (Importin subunit alpha n=19 Tax=Cupressaceae TaxID=3367 RepID=A0A3S6N0U7_9SPER) HSP 1 Score: 164 bits (414), Expect = 3.680e-39 Identity = 134/442 (30.32%), Postives = 211/442 (47.74%), Query Frame = 1
Query: 271 RPVSEVLPYLVELRKLLSLEDPPVEEVVEGGGLAPRLMELLS--TANDQIQMETTWCLTNIASSYSRHTRTILGAXXXXXXXXXXXXXXXXXXXXXXXXXXX-GDSGDFREMLHANGALLPTLRLLQHPPSVEIARTAAWAVSNLARGDGTPGTPFLAAAPVFVASLRGGVSFSAAAEAVAAAGAAAVLPPRDEALRVEAAWILAFLTAKETETVSELVRVGMVPALVEALVDSGGKDPLCTPALRTLGNMVSGNEAWADAVMVHKEFLP--CLDAVLKNQDKSRRVLVKEAAWVASNVAAGRPEHRDALVKQGSPAALTSLLQSDQLDLQQEAAHGIWNIVAHDQELL---------LQAARDDRVLGAYVTLVRAQSPPVVRCALSFLQLVCQNVPD--GPRRVESSGGLEAIDDVHYSGQADPELQEAAGSIVDRFFGE 1548
R E + L LR+LLS P E+ G+ P L++ LS +AN+Q+ +E WCLTNIA+ TR +L A G+ +FR++L A GAL P RLL +RTAAWA+SNL +G P AA + ++ + EA+ + DE L E AWI+ +LTA L+ G++P LV L S L TP LR++GN+V+G+ DAV+ +P + A++K + R L KEAAW SN+AAG H+ + G+ ++L LL + D+++E A+ + N+ E L + R L + L+++ + L FL+LV +++P+ GP+ VE+ G+ A++ + + E++ A +VD++FGE
Sbjct: 98 RSFQEKMEVLCRLRRLLSQTSMPPVEIAVQAGVVPILVQCLSFGSANEQL-LEAAWCLTNIATGDVDQTRALLPALPLLIAHLGEKSSIPVAEQCAWALGNVAGEGEEFRDILLAQGALPPLARLLLSNKG-STSRTAAWALSNLIKGP----KPKAAAELIKISGIP---------EAIVRH-----MQKGDEELATEVAWIVVYLTALSEMHSGLLIEAGLLPPLVGRLASSDQLS-LLTPVLRSIGNLVAGDNRKTDAVLAAGNDIPGSVVGAMIKCLESQHRTLKKEAAWALSNIAAGTLVHKQLIFSSGAVSSLLHLLVTATFDIRKEVAYVLGNLCVATVEETGESMTILEHLTVLVNRRCLPGLINLIKSPDIEAAKLGLQFLELVMRSLPNDQGPKLVENEDGIAAMELFQF--HENEEIRNMANGLVDKYFGE 516
BLAST of mRNA_S-firma_F_contig10059.122.1 vs. uniprot
Match: A0A843UGE6_COLES (Uncharacterized protein n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843UGE6_COLES) HSP 1 Score: 160 bits (406), Expect = 7.800e-39 Identity = 136/442 (30.77%), Postives = 208/442 (47.06%), Query Frame = 1
Query: 277 VSEVLPYLVELRKLLSLED-PPVEEVVEGGGLAPRLMELLSTAN-DQIQMETTWCLTNIASSYSRHTRTILGAXXXXXXXXXXXXXXXXXXXXXXXXXXX-GDSGDFREMLHANGALLPTLRLLQHPPSVEIARTAAWAVSNLARGDGTPG-TPFLAAAPVFVASLRGGVSFSAAAEAVAAAGAAAVLPPRDEALRVEAAWILAFLTAKETETVSELVRVGMVPALVEALVDSGGKDPLCTPALRTLGNMVSGNEAWADAVMV--HKEFLPCLDAVLKNQDKSRRVLVKEAAWVASNVAAGRPEHRDALVKQGSPAALTSLLQSDQLDLQQEAAHGIWNIVAHDQE-------LLLQAAR--DDRVLGAYVTLVRAQSPPVVRCALSFLQLVCQNVP--DGPRRVESSGGLEAIDDVHYSGQADPELQEAAGSIVDRFFGED 1551
V + + L LR+LLS + PPVE ++ G + P L++ LS + D+ +E WCLTN+A+ TR++L A G+ D R L A G LLP R++ ARTAAW +SNL +G T + V A LR L +E L E AW++ +L+A S LVR V LVE L ++ PALR+LGN+VSG+ ++V+V H+ L A++K RVL KEAAWV SN+A G EH+ + + L LL S D+++EAA+ + N+ + +L A+ + L ++ LVR+ R L FL+LV + +P +GP+ VE G++A++ + + E++ A +VD++FG+D
Sbjct: 11 VRKKIEVLRSLRRLLSKSEIPPVEAAIQAGAI-PVLVQCLSFGSPDEQLLEAAWCLTNVAAGEPEQTRSLLPALPLLIAHLGEKSSVPVAEQCAWALGNVAGEGEDLRNTLLAQGVLLPLARMMMSNKG-STARTAAWVLSNLIKGPNPKAATELIKIDGVMDAILRH-------------------LRKGEEELATEVAWVVVYLSALSQIATSMLVRSDAVQLLVERL-EAXXXXXXXIPALRSLGNLVSGDSYTTNSVLVVGHEITDKVLLAIIKCMKTEHRVLKKEAAWVLSNIAVGSLEHKQLIYTSEATLLLLHLLSSAPFDIRKEAAYTLGNLCVTPSDGCGPPNIILPHLAQLVNRGCLPGFINLVRSPDIDAARLGLQFLELVMRGLPNGEGPKLVEREDGIDAMERFQF--HENEEIRNMANGLVDKYFGQD 428
BLAST of mRNA_S-firma_F_contig10059.122.1 vs. uniprot
Match: A0A2K1J1Y0_PHYPA (Importin subunit alpha n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1J1Y0_PHYPA) HSP 1 Score: 162 bits (409), Expect = 2.370e-38 Identity = 134/448 (29.91%), Postives = 213/448 (47.54%), Query Frame = 1
Query: 253 IQGVRERPVSEVLPYLVELRKLLSLEDPPVEEVVEGGGLAPRLMELLSTANDQIQM-ETTWCLTNIASSYSRHTRTILGAXXXXXXXXXXXXXXXXXXXXXXXXXXX-GDSGDFREMLHANGALLPTLRLLQHPPSVEIARTAAWAVSNLARGDGTPGTPFLAAAPVFVASLRGGVSFSAAAEAVAAAGAAAVLPPRDEALRVEAAWILAFLTAKETETVSELVRVGMVPALVEALVDSGGKDPLCTPALRTLGNMVSGNEAWADAVMVHKEFLP--CLDAVLKNQDKSRRVLVKEAAWVASNVAAGRPEHRDALVKQGSPAALTSLLQSDQLDLQQEAAHGIWNIVAHDQE-------LL--LQAARDDRVLGAYVTLVRAQSPPVVRCALSFLQLVCQNVPDG--PRRVESSGGLEAIDDVHYSGQADPELQEAAGSIVDRFFGED 1551
++ + ++ + + L LR+LLS P V G+ P L++ L + Q+ E WCLTNIAS TR + A G++ D R+ L GAL R L P + + RTAAWA+SNL +G + L V +L VS D+ L VE AW+L ++T+ S+L+ G++P LV L S + PL TP LRT+GN+V+ + + DAV+ + LP A+ + + R L KEAAWV SN+AAG H+ A+ G+ + L LL + D+++EAA+ + N+ ++ +L L D L ++ LV++ R L FL+LV + +PDG P+ VE G+ A++++ + A+ EL+ + ++D++FGED
Sbjct: 93 LKNIGKKATPKKVEALQTLRRLLSCSAYPPVHVAVQAGVVPLLVDCLGFGASEDQLFEAAWCLTNIASGDPEQTRAVEPALPLLILHLGEKNPARVVEQCAWALGNVAGEAEDLRDWLLRQGALSALARNLSSP-IITLVRTAAWALSNLIKGPNSRAATELMKMDGIVDTLVRLVSNG------------------DDELVVEVAWVLVYVTSMSDLHSSQLIHAGLLPPLVARLAVSHHQ-PLLTPVLRTIGNIVASDNSKCDAVLAAGQSLPGGINGALARILETEHRTLQKEAAWVVSNLAAGSILHKRAVFNGGAVSPLLYLLATSTFDVRKEAAYALGNLCVAPRDQGEEGKPILEHLNVLVDRGCLMGFIALVKSPDLESARLGLQFLELVMRALPDGKGPKLVEKLDGIAAMEELQF--HANEELRIMSNMLIDQYFGED 518
BLAST of mRNA_S-firma_F_contig10059.122.1 vs. uniprot
Match: A0A7S0HZ05_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HZ05_9CRYP) HSP 1 Score: 156 bits (395), Expect = 3.050e-37 Identity = 119/412 (28.88%), Postives = 198/412 (48.06%), Query Frame = 1
Query: 268 ERPVSEVLPYLVELRKLLSLEDPPVEEVVEGGGLAPRLMELLSTANDQIQMETTWCLTNIASSYSRHTRTILGAXXXXXXXXXXXXXXXXXXXXXXXXXXXGDSGDFREMLHANGALLPTLRLLQHPPSVEIARTAAWAVSNLARGDGTPGTPFLA--AAPVFVASLRGGVSFSAAAEAVAAAGAAAVLPPRDEALRVEAAWILAFLTAKETETVSELVRVGMVPALVEALVDSGGKDPLCTPALRTLGNMVSGNEAWADAVMVHKEFLPCLDAVLKNQDKSRRVLVKEAAWVASNVAAGRPEHRDALVKQGSPAALTSLLQSDQLDLQQEAAHGIWNIVAHDQELLLQAARDDRVLGAYVTLVRAQSPPVVRCALSFLQLVCQNVPDGPRRVESSGGLEAIDDVHYSGQAD 1497
ER + L LR +LS++D + G G L++ + + +E WC+TNIA+ HTR + A G+ + R + ANGA+ P + L+ ++E+ + +AWA+SN RG FL+ V + G S++ AV L VEA W+L+ LT + + L +VG LV+ L + G L PALR +GNM+ G + D ++ H L L A+L+ +K+ L+KEA+WV SNVAAG+P HR A++++G L +LQ+ D+++EAA +++++ HD Q + + +V L+RA P VV AL+ + + + GPR E + G++A++ + Y+ ++
Sbjct: 58 ERGGEDARARLKSLRTVLSMQDDELISYAVGAGAIDVLIKYIRGKCGECILEAAWCITNIATGTLEHTREAMRAAPDLIMLIDSPDPRIQEQCIWALGNMAGEDEECRNTIRANGAITPIMEKLKCR-TMEVQKISAWALSNFMRGHDAHVQEFLSLGVGDAVVGIILGQQDVSSSHPAVE--------------LMVEAVWLLSILTHNQEHFGTHLCQVGATSRLVQFL--NSGVVQLEMPALRCIGNMICGPDEITDHLLSHPACLKQLHAMLRTGNKA---LMKEASWVLSNVAAGKPTHRAAMMEEGMQKTLFHILQTSHFDIRKEAAFALFHLL-HDPAYT-QTLFNRELATEFVGLLRAPDPQVVDMALTVAERILATMEGGPRLFEEADGIDALEQLIYANSSE 447
BLAST of mRNA_S-firma_F_contig10059.122.1 vs. uniprot
Match: A0A7S2BA76_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BA76_9STRA) HSP 1 Score: 150 bits (380), Expect = 1.240e-36 Identity = 110/309 (35.60%), Postives = 166/309 (53.72%), Query Frame = 1
Query: 838 DEALRVEAAWILAFLTAKETETVSELVRVGMVPALVEALVDSGGKDPLCTPALRTLGNMVSGNEAWADAVMVHKEFL-PCLDAVLKNQDKSR--RVLVKEAAWVASNVAAGRPEHRDALVKQGSPAALTSLLQSDQLDLQQEAAHGIWNIVAHDQELLLQAARDDRVLGAYVTLVRAQSPPVVRCALSFLQLVCQNVPD-GPRRVESSGGLEAIDDVHYSGQADPELQEAAGSIVDRFFGEDGYESSDEGGDEETDTETAVSGGEGFSFGDSSASTTVRSFGQQQQPQQPLAPLGRGSHLTRPAWMNQN 1752
DE++ E AW+L FL A+ E + +V +G+VPALV AL S +P+ TPALR +GN+VS E++A V+ L P + ++ + R L+KEA W SN+AAG P H ++ P LT LL + + D+Q+EA + N+++ + A + VL + L+R V+ C+L+ + ++ + P P VE +GGLEAIDD+HY G +++E A S+VD ++G++ YE + G D G+ F D VR G Q QPQ LGRG + RPAWM +
Sbjct: 24 DESVVAEVAWVLVFLVARSDEAAAAIVTLGVVPALVTALHKSNATNPVATPALRIIGNLVSIGESFATTVLEQSTLLLPLMKRIVDGSGGTATPRGLLKEAVWTMSNMAAG-PVHHRTMMANFLPDLLT-LLNTGKFDVQREALFAVRNLMS--DPACVAFALGNGVLPPCIALLRTHDHDVILCSLTVIGVILKTSPSTAPTIVEDAGGLEAIDDLHY-GDVSDDVRELAASLVDTYYGDE-YEPTQSGDDGRQ--------GQLMQFSD------VR--GPQAQPQ---GGLGRGRDINRPAWMTSS 307
BLAST of mRNA_S-firma_F_contig10059.122.1 vs. uniprot
Match: A0A7S4L2U6_GUITH (Importin subunit alpha n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4L2U6_GUITH) HSP 1 Score: 154 bits (388), Expect = 4.610e-36 Identity = 120/439 (27.33%), Postives = 208/439 (47.38%), Query Frame = 1
Query: 235 EKLAVAIQGVRERPVSEVLPYLVELRKLLSLEDPPVEEVVEGGGLAPRLMELLSTANDQIQMETTWCLTNIASSYSRHTRTILGAXXXXXXXXXXXXXXXXXXXXXXXXXXXGDSGDFREMLHANGALLPTLRLLQHPPSVEIARTAAWAVSNLARGDGTPGTPFLAAAPVFVASLRGGVSFSAAAEAVAAAGAAAVLPPRDEALRVEAAWILAFLTAKETETVSELVRVGMVPALVEALVDSGGKDPLCTPALRTLGNMVSGNEAWADAVMVHKEFLPCLDAVLKNQDKSRRVLVKEAAWVASNVAAGRPEHRDALVKQGSPAALTSLLQSDQLDLQQEAAHGIWNIVAHDQELLLQAARDDRVLGAYVTLVRAQSPPVVRCALSFLQLVCQNVPDGPRRVESSGGLEAIDDVHYSGQADPELQEAAGSIVDRFFGED 1551
E + + +G + + L LR +LS++D + G G L++ + + +E WC+TNIA+ HTR + + G+ R+ + ANGA+ P + L + VE+ + +AWA++NL RG F A V V E V ++ A++ L VE W+L+ LT + + L +VG+ LV L G L PALR +GNM+ G + D ++ H L L +L+ +K L+KEA WV SN+AAG+ HR A++++G A+L +L++ D+++EAA +++++ HD + + +V L+RA P VV AL+ + + + GPR E + G++A++ + Y+ + + ++ +VD++FGED
Sbjct: 65 EAIVRSCEGALNKGGDDARRCLKSLRTVLSMQDDDLISYAVGAGAVDMLLKYIKGNCGECILEAAWCITNIATGSLEHTRDAMRSAPDLIMLIDSPDPRIQEQCIWALGNMAGEDEQCRDTIRANGAIRPIINKL-NGRMVEVQKISAWALANLMRGQDPKLDEFFAMGLGEVV-----VELILTQEEVPSSHASSEL-------MVEVVWLLSILTHNQEKFALHLCQVGVASKLVRYL--ESGMAQLEMPALRCIGNMICGPDEITDHLLSHPACLKQLHVMLQTGNKG---LMKEATWVLSNIAAGKANHRAAMMEEGVHASLIVILKTSHFDIRKEAAFALFHLL-HDPAYTPTLFTPE-LATEFVGLLRAPDPQVVDMALTVAERILATMEGGPRLFEEADGIDALEQLIYANSSQAVVARSS-FLVDKYFGED 482
BLAST of mRNA_S-firma_F_contig10059.122.1 vs. uniprot
Match: A0A0D6R435_ARACU (Importin subunit alpha n=1 Tax=Araucaria cunninghamii TaxID=56994 RepID=A0A0D6R435_ARACU) HSP 1 Score: 154 bits (390), Expect = 4.990e-36 Identity = 132/440 (30.00%), Postives = 207/440 (47.05%), Query Frame = 1
Query: 289 LPYLVELRKLLSLEDPPVEEVVEGGGLAPRLMELLS--TANDQIQMETTWCLTNIASSYSRHTRTILGAXXXXXXXXXXXXXXXXXXXXXXXXXXX-GDSGDFREMLHANGALLPTLRLLQHPPSVEIARTAAWAVSNLARGDGTPGTPFLAAAPVFVASLRGGVSFSAAAEAVAAAGAAAVLPPR----DEALRVEAAWILAFLTAKETETVSELVRVGMVPALVEALVDSGGKDPLCTPALRTLGNMVSGNEAWADAVMVHKEFLP--CLDAVLKNQDKSRRVLVKEAAWVASNVAAGRPEHRDALVKQGSPAALTSLLQSDQLDLQQEAAHGIWNI----VAHDQELL-----LQAARDDRVLGAYVTLVRAQSPPVVRCALSFLQLVCQNVPDG--PRRVESSGGLEAIDDVHYSGQADPELQEAAGSIVDRFFGE 1548
+ L LR+LLS P EV G+ P L++ LS +A++Q+ +E WCLTNIA+ T+ +L A G+ +FR++L A GAL P+L L ARTAAWA+SNL +G AA E V G V+ DE L E AW++ +LTA L+ G++P L+ L S + L TP LR++GN+V+G+ DAV+ + +P + A++K + R L KEAAW SN+AAG H+ + G+ + L LL + D+++E A+ + N+ V E + L + L ++ L+++ + L FL+LV + +P+G PR VE+ G+ A++ + + EL+ A +VD++FGE
Sbjct: 104 MEVLRRLRRLLSQTSIPPVEVAVHAGVVPVLVQCLSFGSADEQL-LEAAWCLTNIATGELEQTQALLPALPMLIAHLGEKSSIPVAEQCAWAVGNVAGEGEEFRDILLAQGAL-PSLARLMLSNKGSTARTAAWALSNLIKGPKP----------------------KAAVELVKMNGIPEVIVRHMQKGDEELATEVAWVVVYLTALSEMQSGLLITAGLLPPLIGRLASSD-QLALLTPVLRSIGNLVAGDNHKLDAVIAAGQDIPGSVIGAMIKCLESEHRTLKKEAAWALSNIAAGTVVHKQLIFSSGAVSPLLHLLATATFDIRKEVAYVLGNLCVATVGKTGETVPILEHLTVFVNRGCLRGFINLIKSPDTEAAKLGLQFLELVMRGLPNGQGPRLVEAEDGIAAMELFQF--HENEELRNMANGLVDKYFGE 516
BLAST of mRNA_S-firma_F_contig10059.122.1 vs. uniprot
Match: A0A388K6S0_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388K6S0_CHABU) HSP 1 Score: 154 bits (389), Expect = 2.920e-35 Identity = 140/478 (29.29%), Postives = 217/478 (45.40%), Query Frame = 1
Query: 334 PPVEEVVEGGGLAPRLMELLSTANDQIQM-ETTWCLTNIASSYSRHTRTILGAXXXXXXXXXXXXXXXXXXXXXXXXXXX-GDSGDFREMLHANGALLPTLRLLQHPPSVEIARTAAWAVSNLARGDGTPGTPFLAAAPVFVASLRGGVSFSAAAEAVAAAGAAAVLPPRDEALRVEAAWILAFLTAKETETVSELVRVGMVPALVEALVDSGGKDPLCTPALRTLGNMVSGNEAWADAVMVHKEFLP--CLDAVLKNQDKSRRVLVKEAAWVASNVAAGRPEHRDALVKQGSPAALTSLLQSDQLDLQQEAAHGIWNI-----------------VAHD------QELLLQAAR------------------DDRVLGAYVTLVRAQSPPVVRCALSFLQLVCQNVPD--GPRRVESSGGLEAIDDVHYSGQADPELQEAAGSIVDRFFGEDGYESSDEGGDEETDTETAVSGGEGF 1626
PPV V G + P L+E L + + Q+ E WC+TNIAS S +T L A G+ + R +L ANGAL P RL+ +ART+AW +SNL +G +A + + +RG + +A L D L VE AW+L ++T+ V L+ G++P L+ LV S L TP +RT+GN+V+G + DAV+V +P + +++ + R+L KEAAWV SN+A G H++A+ G+ L LL + D+++E A+ I N+ V H +E+ + AA D + ++ LVR+ + L FL+LV + +PD GP+ VE G+EA++ + ++ EL+ + ++D+FFGED Y G +EE V GG GF
Sbjct: 160 PPVTPAVRAG-VIPLLIECLKFGSREEQLVEAAWCVTNIASGDSENTVAALAAAPLLIAHLGDKSPMPVAEQCAWALGNMAGEGPEVRAVLLANGALRPLARLMGVMRPSSVARTSAWVMSNLIKGPDP-------SAAMELMKVRGMMELLISA-----------LSKGDTDLVVEVAWVLTYVTSMLDPQVPRLIEAGLLPPLLRHLV-SASTPGLLTPVVRTIGNIVAGENSRTDAVLVAGAEIPGGLIGGLVRCLESEHRILQKEAAWVLSNIAGGTVAHKEAVFSGGAMPPLLHLLATAAFDVRKEVAYVIGNVCVMPAAAXXXXXXVATKVGHSPSAGEVEEMAMAAAAAHNPSQPDVLVNHLVSVVDRGCVPGFIALVRSLDIEAAKLGLQFLELVLRAMPDRRGPQVVEKEDGIEAMESLQN--HSNDELRAMSNHLIDKFFGED-Y-----GLEEEYGVGAVVGGGGGF 609 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10059.122.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10059.122.1 >prot_S-firma_F_contig10059.122.1 ID=prot_S-firma_F_contig10059.122.1|Name=mRNA_S-firma_F_contig10059.122.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=587bp MPPKNRDSKPLLLQNQTQKRRDRAQELRSARRQGVLAKRRKFDAPSVTTAback to top mRNA from alignment at S-firma_F_contig10059:463..5450+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10059.122.1 ID=mRNA_S-firma_F_contig10059.122.1|Name=mRNA_S-firma_F_contig10059.122.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=4988bp|location=Sequence derived from alignment at S-firma_F_contig10059:463..5450+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10059:463..5450+ >mRNA_S-firma_F_contig10059.122.1 ID=mRNA_S-firma_F_contig10059.122.1|Name=mRNA_S-firma_F_contig10059.122.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=3522bp|location=Sequence derived from alignment at S-firma_F_contig10059:463..5450+ (Sphaerotrichia firma ET2_F female)back to top |