mRNA_S-firma_F_contig10050.115.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig10050.115.1
Unique NamemRNA_S-firma_F_contig10050.115.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
BLAST of mRNA_S-firma_F_contig10050.115.1 vs. uniprot
Match: A0A7S1CID5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CID5_9STRA)

HSP 1 Score: 210 bits (534), Expect = 6.450e-62
Identity = 122/317 (38.49%), Postives = 185/317 (58.36%), Query Frame = 1
Query:    7 VVRMTTRDKKAAERGFDPLLGRYRDAGAETATRAAAERARIAATNKARDKQLHQMQTYDIINHRPVVAEPEPKPQRRGP-ASTRAPYNIVSNLDYKEHHHAPPEERPEGTFVPPRSLKNYVSHKADKRQYDILTNKYHEKHQEKDAVDREMARRTAADRFWQTRDFNPVTGSYYDRAKESAFVEKRSEKEVEHVKTAGRTLPPSFKGSEGAAYDILSHKTKDETTLKKVEAAQTRSVLTRVRHDVEDHLKSKGAGSQDLELARAGNRISAKRHEERMAHGHDVLTNKPFRGIDSAPVHAPVAGRAHKGVWSKIEQEE 954
            +  +T  +K   ER FDP+L  YRD G E+A        ++ A N+ARDKQL   QTYDIIN  P   EP P  +R  P A +R  YNI++N+   EHH+ PP +RP          K  ++ +  KR +D+++N+Y E H+EKDAVDREM R+ AA+RFWQTR FNPVT +YYD  KE AF +  +E+           LPPS K SEG AY++LS + ++   ++  +  + ++   R+  +VE  +K++    +D+   R  +R+S +R  E   HG+++LTN PF+G++S  V    + +     W++ E+E+
Sbjct:   47 IKHVTRYEKSREEREFDPILQHYRDDGKESAKVTLDATKKLVALNRARDKQLRYTQTYDIINFVPRTKEP-PAQERPPPRADSRTNYNIITNMGLHEHHYLPPGQRPPXXXX--XXPKETLASRTTKRDFDLISNRYMEAHEEKDAVDREMQRQAAAERFWQTRSFNPVTCAYYDEKKEDAFKQTVAEETRTWGSKQFARLPPSVKVSEGVAYNVLSMEERNAEAMRARDRIKAKASKARIGPEVEARVKARAEKVEDIMEQRTLHRVSYQRDREARKHGYNLLTNAPFQGLNSTTVFESRSAKP-TSAWARAEEEK 359          
BLAST of mRNA_S-firma_F_contig10050.115.1 vs. uniprot
Match: A0A2R5GVT4_9STRA (Uncharacterized protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GVT4_9STRA)

HSP 1 Score: 171 bits (433), Expect = 6.940e-47
Identity = 109/335 (32.54%), Postives = 177/335 (52.84%), Query Frame = 1
Query:    1 DPVVRMTTRDKKAAERGFDPLLGRYRDAGAETATRAAAERARIAATNKARDKQLHQMQTYDIINHRPV---VAEPEPKPQRRGPAS---------TRAPYNIVSNLDYKEHHHAPPEERPEGTFVPPRSLKNYVSHKADKRQYDILTNKYHEKHQEKDAVDREMARRTAADRFWQTRDFNPVTGSYYDRAKESAFVEKRSEKEVEHVKTAGRTLPPSFKGSEGAAYDILSHKTKDETTLKKVEAAQTRSVLTRVRHDVEDHLKSKGAGSQDLELARAGNRISAKRHEE--RMAHGHDVLTNKPFRGIDSAPVHAPVAGRAHKGVWSKIEQEEHMV 963
            +PV  +T  +    ER FDP+L ++ D+  E++        R    N+ + +QL+++  ++++NH PV   V E E + Q    A+         +R  +NI+SNLD  +HH+  PEERPE     PR+ +++V  +     +D+++N+Y E H+ K A D E  +R AA RFW+TRDF+PVT  +YD AKE  F ++R E E  H     + LPP+ + S+G  +DI+S + ++        AA+T S +  +R   E   +  G     L   R  NR + +RH +     HG+D++  +PF G    P    V G + K +W K+E++   V
Sbjct:   34 EPVKYVTRYEVSRKERAFDPVLQKFSDSQRESSLCKHEREERTRFLNRRKVQQLNKVSHFNVVNHDPVLPGVREAEARKQEAASAAQREEVQRRRSRTGFNIISNLDLADHHYVAPEERPERLKEKPRT-QSFVEKRTSHPDFDVISNRYRESHEAKVAADLEAQKRQAAQRFWETRDFDPVTCKFYDGAKEEKFHKRRVEMEKTHGHNFAKRLPPTLRESDGLRFDIVSMQPRNLNQASDKLAAETSSSVG-LRASTERAQQESGVIHARLSEKRKENRCTPERHRQVHSYEHGYDIVNTRPFVGRAGIPKPV-VKGSSRKSLWDKLEEQRQTV 365          
BLAST of mRNA_S-firma_F_contig10050.115.1 vs. uniprot
Match: A0A5A8DKV0_CAFRO (Uncharacterized protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DKV0_CAFRO)

HSP 1 Score: 164 bits (414), Expect = 2.860e-44
Identity = 102/294 (34.69%), Postives = 155/294 (52.72%), Query Frame = 1
Query:   37 AAERGFDPLLGRYRDAGAETATRAAAERARIAATNKARDKQLHQMQTYDIINHRPVVAEPEPKPQRRGPAST---RAPYNIVSNLDYKEHHHAPPEERPEG--TFVPPRSLKNYVSHKADKRQYDILTNKYHEKHQEKDAVDREMARRTAADRFWQTRDFNPVTGSYYDRAKESAFVEKRSEKEVEHVKTAGRTLPPSFKGSEGAAYDILSHKTKDETTLKKVEAAQTRSVLTRVRHDVEDHLKSKGAGSQDLELARAGNRISAKRHEERM-AHGHDVLTNKPFRGIDSAPVHA 900
            A +R FDP+LGR+RD   E AT      A +AA+N+ RDKQL   Q YDI+ H+ +V + EP    R P+ T   R  +NI+SN     HH   P+ RP G  + V     + +V+H +  R +D++T +Y   H+ K A D ++ARR AADR+WQTRDF+PV   +YD  K++                    LPP+ +  E A YD++ H+  DE  ++ ++A   R ++  +R + E  L  +G  + +    R+  R + K   +       D+LT  P RG+D+A  HA
Sbjct:   50 ARDRAFDPVLGRFRDGAVERATAQREREAAVAASNRGRDKQLRVSQRYDIVTHKALVDD-EPVATARPPSQTYRSRVGFNIISNEPLANHHFDRPDRRPRGGDSGVGGGGARAHVAHASMDRDFDVVTGRYLADHEAKAARDEDIARRRAADRWWQTRDFDPVRQRFYDAEKDAKAAXXXXXXXXXXXXXXXXALPPAERLRETAGYDVVGHRVIDEERMRVIDARIHRPLVRPLRQETEARLTKEGVVAAERAAGRSVRRAALKNARDLPDRRPFDMLTGAPLRGVDAAEAHA 342          
BLAST of mRNA_S-firma_F_contig10050.115.1 vs. uniprot
Match: A0A1R2CFZ7_9CILI (Uncharacterized protein n=2 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2CFZ7_9CILI)

HSP 1 Score: 139 bits (349), Expect = 1.480e-34
Identity = 94/312 (30.13%), Postives = 154/312 (49.36%), Query Frame = 1
Query:   52 FDPLLGRYRDAGAETATRAAAERARIAATNKARDKQLHQMQTYDIINHRPVVAEPEPKP-----------QRRGPASTRAPYNIVSNLDYKEHHHAPPEERPEGTFVPPRSLKNYVSHKADKRQYDILTNKYHEKHQEKDAVDREMARRTAADRFWQTRDFNPVTGSYYDRAKESAFVEKRSEKEVEHVKTAGRTLPPSFKGSEGAAYDILSHKTKDETTLKKVEAAQTRSVLT-RVRHDVEDHLKSKGAGSQDLELARAGNRISAKRHEERMAHGHDVLTNKPFRGIDSAPVHAPVAGRAHKGVWSKIEQE 951
            ++P+L  Y D   E   R   ++  I      +D+ L   QT++++N    +   E  P            RR   ++   YNIVSN D+ +HH  PPE RP     P   +K Y  H  + R Y+ILTN+Y ++H++K  +D E  R+ AA  +W++RDF+P+  ++ D  KE  +  +  EKE  H       LP   K SEGA Y  +  K  D+  L++++  +  +      R+D+E   + K    QDL+ + + NRIS +R  E    G++++++ PF+G+ +  +H P        VW K   E
Sbjct:   41 YNPILQTYNDPLIEKNLREIEKKRMIDTLAMNQDRALRYEQTFNLVNLENKLKGLEGLPGYPVEKLXXXXXRRLGNTSNTEYNIVSNQDFADHHFLPPENRPPR---PATKVKTYKIHTVEYRDYNILTNRYFQQHEQKTKLDNESYRQEAAAEYWKSRDFDPIKCTFVDEVKEKDYWNEVKEKEKTHGIEYIEKLPHGIKYSEGALYQPIGMKVVDKKRLEEIDLREKNAKKRYENRYDIEKDYRIKDIAEQDLKKSASLNRISHERFLETTNRGYNIISHAPFQGLGAEKLHLPRTN-PKVSVWDKAVNE 348          
BLAST of mRNA_S-firma_F_contig10050.115.1 vs. uniprot
Match: A0A7S3PPV6_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PPV6_9STRA)

HSP 1 Score: 133 bits (335), Expect = 4.310e-33
Identity = 87/275 (31.64%), Postives = 141/275 (51.27%), Query Frame = 1
Query:  139 NKARDKQLHQMQTYDIINHRPVVAEPEPKPQRRGPAS--TRAPYNIVSNLDYKEHHHAPPEERPEGTFVPPRSLKNYVSHKADKRQYDILTNKYHEKHQEKDAVDREMARRTAADRFWQTRDFNPVTGSYYDRAKESAFVEKRSEKEVEHVKTAGRTLPPSFKGSEGAAYDILSHKTKDETTLKKVEAAQTRSVLTRVRHDVEDHLKSKGAGSQDLELARAGNRISAKRHEERMAH--GHDVLTNKPFRGIDSAPVHAPVAGRAHKGVWSKIEQE 951
            N ++ K+L     Y+I+NH   +   +    ++   +  ++A YNI+SN+D  +HH+A P  RPE    P +  +   S K D  ++DI++N Y E ++EK   D +  ++ A D++WQ+RDF+PV  S+YD  KE  F+EK  +++ +H     + LP S + SEG   DI+S + KD    K  E  Q R         +E   K +    + L+  R  NR   KR  E  ++  G++++ +K F G D  P  A       K +W K EQ+
Sbjct:    3 NNSKVKELRSGSLYNIVNHTSNIPGGKISKSKKLIKNNISQAGYNIISNIDLSQHHYAHPSGRPE----PMKEARRSSSRKPD-HEFDIISNLYRENNKEKQHFDSQRMKKLAVDKYWQSRDFDPVRCSFYDSKKEKIFIEKLKDRDKKHGGDHHKRLPMSVRESEGGFSDIISKEVKDNMRFKAWERRQNRYKNRPGARKIEQSQKERAGKLEQLQEQRFINRCLVKRQSEIQSYEQGYNIINHKSFVGRDGVPK-AQFRSPLPKSLWEKFEQQ 271          
BLAST of mRNA_S-firma_F_contig10050.115.1 vs. uniprot
Match: A0A6A3P014_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3P014_9STRA)

HSP 1 Score: 135 bits (341), Expect = 8.110e-33
Identity = 106/325 (32.62%), Postives = 158/325 (48.62%), Query Frame = 1
Query:    4 PVVRMTTRDKKAAERGFDPLLGRYRDAGAETA--TRAAAERARIAATNKARDKQLHQMQTYDIINHRPVVA--------EPEPKPQRRGPASTRAPYNIVSNLDYKEHHHAPPEERPEGTFVPPRSLKNYVSHKADKRQYDILTNKYHEKHQEKDAVDREMARRTAADRFWQTRDFNPVTGSYYDRAKESAFVEKRSEKEVEHVKTAGRTLPPSFKGSEGAAYDILSHKTKDETTLKKVEAAQTRSVLTRVRHDV-EDHLKSKGAGSQDLELARAGNRISAKRHEERMAHGHDVLTNKPFRGIDSAPVHAPVAGRAHKGVWSKIE 945
            PV  +T  +K   ER +D +LGR+RD   E     R   E  R     K R KQL  +Q + +I + P+          +P P P R+  A   A YNIV+N+ Y             GT   P S     S K   R+++ILTNKYH++H ++   D   A+R AA ++++TR F+PV  +Y D  +E  FV +R E++  H K     LPP  + SEG  Y+IL+ +  +   L  +     R VL +++    E  ++  G   Q  E     NR + +RH +   HG+DVL+N+P+ G D+ P+  P    A    W  IE
Sbjct:   73 PVKHVTRYEKSREEREYDIVLGRFRDEDKEQGYQQREGVELKRT--LEKGRAKQLRTIQRFHMITNAPMYPGAKNPTDKQPVPHPYRKKSA---AEYNIVTNIPYN------------GTSGQPASTAASPSRKPY-REFNILTNKYHDRHDDRFEQDAAQAKRIAAQKYFKTRTFDPVRITYVDEDREKEFVARRHEEQQIHGKDRVLVLPPREQFSEGRLYNILNQRVINSAKLTTMNEKDQR-VLNKIKKTAYETKMREVGENQQARETDLCLNRYAHERHIQSHVHGYDVLSNQPYAGRDAKPIVHPRT-HAQLTAWQTIE 377          
BLAST of mRNA_S-firma_F_contig10050.115.1 vs. uniprot
Match: G4YW10_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YW10_PHYSP)

HSP 1 Score: 134 bits (337), Expect = 2.870e-32
Identity = 103/323 (31.89%), Postives = 159/323 (49.23%), Query Frame = 1
Query:    4 PVVRMTTRDKKAAERGFDPLLGRYRDAGAETATRAAAERARIAATNKARDKQLHQMQTYDIINHRPVVA--------EPEPKPQRRGPASTRAPYNIVSNLDYKEHHHAPPEERPEGTFVPPRSLKNYVSHKADKRQYDILTNKYHEKHQEKDAVDREMARRTAADRFWQTRDFNPVTGSYYDRAKESAFVEKRSEKEVEHVKTAGRTLPPSFKGSEGAAYDILSHKTKDETTLKKVEAAQTRSVLTRVRHDV-EDHLKSKGAGSQDLELARAGNRISAKRHEERMAHGHDVLTNKPFRGIDSAPVHAPVAGRAHKGVWSKIE 945
            PV  +T  +K   ER +D +LGR+RD   E   +         +  K R KQL  +Q + +I + P+          +P P P R+  A   A YNIV+N+ Y     APP      T   P S + Y       R+++ILTNKYH++H ++   +   A+R AA ++++TR F+PV  +Y D  +E  F+ +R E++  H K     LPP  + SEG  Y+IL+ +  +   L  +     R VL +++    E  ++  G   Q  E     NR + +RH E   HG+DVL+N+P+ G D+ P+  P    A    W  IE
Sbjct:   70 PVKHVTRYEKSREEREYDVVLGRFRDEDKEQGYQQREGLDVKRSLEKGRAKQLRTIQRFHMITNAPMYPGAKDPTDKQPVPHPYRKKSA---AEYNIVTNIPYNGTSGAPPS-----TTASP-SRRPY-------REFNILTNKYHDRHDDRFEQEAVQAKRIAAQKYFKTRTFDPVRITYVDEEREKEFLVRRHEEQQVHGKDRVLMLPPREQFSEGRLYNILNQRVINSAKLATMNEKDQR-VLNKIKKTAYETKMREVGENQQARETDLCLNRYAHERHIESHVHGYDVLSNQPYVGRDAKPIVYPRT-HAQLSAWQTIE 374          
BLAST of mRNA_S-firma_F_contig10050.115.1 vs. uniprot
Match: A0A2D4BR16_PYTIN (Lectin putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BR16_PYTIN)

HSP 1 Score: 134 bits (337), Expect = 2.340e-31
Identity = 92/300 (30.67%), Postives = 150/300 (50.00%), Query Frame = 1
Query:    4 PVVRMTTRDKKAAERGFDPLLGRYRDAGAETATRAAAERARIAATNKARDKQLHQMQTYDIINHRPVVA------EPEPKPQRRGPASTRAPYNIVSNLDYKEHHHAPPEERPEGTFVPPRSLKNYVSHKADKRQYDILTNKYHEKHQEKDAVDREMARRTAADRFWQTRDFNPVTGSYYDRAKESAFVEKRSEKEVEHVKTAGRTLPPSFKGSEGAAYDILSHKTKDETTLKKVEAAQTRSVLTRVRHDVEDHLKSKGAGSQDLELARAGNRISAKRHEERMAHGHDVLTNKPFRGIDS 885
            PV  +T  +K   ER +D +LG++RDA  E   +      R  +   +R KQL  +Q + +I+H P+        +PEP   R    ++   YNIV+N          P      +     S    +S KA  R ++ILTNKYH +H E++  + + A+  AA +F +T DF+PV   Y+D  KE AF+ +R ++++ H K     LPP  + SEG  Y+IL+    +   + + + A  R++    + + E   +  G    +LE  R  NR + +RH +   HG+D +TN+ F G+ S
Sbjct:  370 PVKHVTRYEKSREEREYDLILGKFRDAERELQQQQDDVTHRKQSLEHSRAKQLRNVQRFHVIHHSPMYPGARDPKDPEPNRPRPVRRTSNVDYNIVTNQ---------PSSAASSSETNATSPSASLS-KARMRDFNILTNKYHRQHDERERNETQAAKHAAAVKFVKTHDFDPVRIRYFDDDKEQAFLVRRHDEQLTHGKDRVSKLPPRERLSEGRLYNILNQDVLNAAEITRFQDAADRALHKMKKTEFEARKRQDGERQLELEDTRCLNRFAHERHSQSFVHGYDPITNESFDGVQS 659          
BLAST of mRNA_S-firma_F_contig10050.115.1 vs. uniprot
Match: A0A833SVY2_PHYIN (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SVY2_PHYIN)

HSP 1 Score: 128 bits (322), Expect = 3.040e-30
Identity = 100/335 (29.85%), Postives = 162/335 (48.36%), Query Frame = 1
Query:    4 PVVRMTTRDKKAAERGFDPLLGRYRDAGAETATRAAAERARIAATNKARDKQLHQMQTYDIINHRPVVA--------EPEPKPQRRGPASTRAPYNIVSNLDYKEHHHAPPEERPEGTFVPPRSLKNYVSHKADKRQYDILTNKYHEKHQEKDAVDREMARRTAADRFWQTRDFNPVTGSYYDRAKESAFVEKRSEKEVEHVKTAGRTLPPSFKGSEGAAYDILSHKT-----------KDETTLKKVEAAQTRSVLTRVRHDVEDHLKSKGAGSQDLELARAGNRISAKRHEERMAHGHDVLTNKPFRGIDSAPVHAPVAGRAHKGV--WSKIE 945
            PV  +T  +K   ER +D LLGR+R    E   +            K R KQL  +Q +++I++ P+          +P   P R+  A   A YNIV+N  +             GT   P +  +  SHK   R+++ILTNKY ++H  +   +   A+R AA ++++TR F+P+  ++ D  +E  F+++R E++  H K     LPP  + SEG  Y+IL+ +            KD+ TL K++     + +  V        +++ A   DL+L    NR + +RH E   HG+DVL+N+P+ G D+ P+  P   R H  +  W  IE
Sbjct:   63 PVKYVTRYEKSREEREYDALLGRFRSEDKEMGLQQRESTELKRNLEKGRAKQLRTIQRFNMISNEPMYPGAKDPTDKQPVAHPNRKNSA---ADYNIVTNFPHN------------GTSASPPATGSSPSHKPH-REFNILTNKYFDRHDARFNKEAAEAKRIAAQKYFKTRTFDPIRITFLDEEREKEFLKRRQEQQQVHGKDRVLVLPPREQFSEGRVYNILNQQVINPNKLATINNKDQRTLNKIKKTAFETKMREVG-------ETQRARDTDLQL----NRFAHERHTESHVHGYDVLSNQPYAGRDAKPLAHP---RTHAALTPWQTIE 367          
BLAST of mRNA_S-firma_F_contig10050.115.1 vs. uniprot
Match: A0A078B7Z9_STYLE (Uncharacterized protein n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078B7Z9_STYLE)

HSP 1 Score: 129 bits (324), Expect = 5.400e-30
Identity = 97/325 (29.85%), Postives = 155/325 (47.69%), Query Frame = 1
Query:    1 DPVVRMTTRDKKAAERGFDPLLGRYRDAGAETATRAAAERARIAATNKARDKQLHQMQTYDIINHRPVVAE-------PEPKPQRRGPAS-TRAPYNIVSNLDYKEHHHAPPEERPEGTFVPPRSLKNYVSHKADKRQYDILTNKYHEKHQEKDAVDREMARRTAADRFWQTRDFNPVTGSYYDRAKESAFVEKRSEKEVEHVKTAGRTLPPSFKGSEGAAYDILSHKTKDETTLKKVEAAQ-TRSVLTRVRHDVEDHLKSKGAGSQDLELARAGNRISAKRHEERMAHGHDVLTNKPFRGIDSAPVHAPVAGRAHKGVWSKIEQ 948
            +P V+ T  D KA E  ++P+  ++ DA  E       +   I    K +D+ L   QT+D+IN    +         P+ KP    P   T A YNI+SN+   EHH   P++RP              +     R Y+I+T +Y E H +K   D+E+ R  AA ++WQT  F+PV   YYD  +E  F+EK++E E  H K   + LP S + +EG  Y+ ++ + +D+  L + +  +  +     VR+DVE   +  G   Q+       N+++  R +E    G D+LTN P  G  ++        +  +GVW+K  Q
Sbjct:   45 EPYVKRTHADYKARETIYNPITQKFNDAQVENHVSKIEKDNFIEVIAKNKDRALRYEQTFDVINFDNKLKGLEGNPDYPKDKPWYFRPGKDTAADYNILSNIPLTEHHFNHPDKRPXXXXXXXXXXXXXTT--TGLRDYNIITGRYLEFHDDKLKTDQEIQRAEAAYKYWQTHQFDPVNCEYYDPNQEKEFIEKKTEDEKIHGKDQVKKLPISVQ-NEGLMYNPINMQIEDQQRLYERDLREKNKRKRFEVRYDVEAKTRKDGFSEQERADIMKLNKVAHSRFKEEQERGFDILTNDPLNGPQASKSVFQPRVQPPRGVWTKALQ 366          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10050.115.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S1CID5_9STRA6.450e-6238.49Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A2R5GVT4_9STRA6.940e-4732.54Uncharacterized protein n=1 Tax=Hondaea fermentalg... [more]
A0A5A8DKV0_CAFRO2.860e-4434.69Uncharacterized protein n=4 Tax=Cafeteria roenberg... [more]
A0A1R2CFZ7_9CILI1.480e-3430.13Uncharacterized protein n=2 Tax=Stentor coeruleus ... [more]
A0A7S3PPV6_9STRA4.310e-3331.64Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A6A3P014_9STRA8.110e-3332.62Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]
G4YW10_PHYSP2.870e-3231.89Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
A0A2D4BR16_PYTIN2.340e-3130.67Lectin putative n=1 Tax=Pythium insidiosum TaxID=1... [more]
A0A833SVY2_PHYIN3.040e-3029.85Uncharacterized protein n=2 Tax=Phytophthora infes... [more]
A0A078B7Z9_STYLE5.400e-3029.85Uncharacterized protein n=1 Tax=Stylonychia lemnae... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10050contigS-firma_F_contig10050:3836..5070 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Seed ortholog4787.PITG_11222T0
Max annot lvl4776|Peronosporales
Evalue8.56e-31
EggNOG OGs2AXZZ@1|root,2S023@2759|Eukaryota,3QDTH@4776|Peronosporales
Hectar predicted targeting categoryother localisation
Exons5
Model size963
Cds size948
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10050.115.1prot_S-firma_F_contig10050.115.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig10050 3836..5055 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815529.4882329-CDS-S-firma_F_contig10050:3835..40171622815529.4882329-CDS-S-firma_F_contig10050:3835..4017Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10050 3836..4017 -
1696949392.0036333-CDS-S-firma_F_contig10050:3835..40171696949392.0036333-CDS-S-firma_F_contig10050:3835..4017Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10050 3836..4017 -
1622815529.5040433-CDS-S-firma_F_contig10050:4076..43201622815529.5040433-CDS-S-firma_F_contig10050:4076..4320Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10050 4077..4320 -
1696949392.0209775-CDS-S-firma_F_contig10050:4076..43201696949392.0209775-CDS-S-firma_F_contig10050:4076..4320Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10050 4077..4320 -
1622815529.5242355-CDS-S-firma_F_contig10050:4376..45931622815529.5242355-CDS-S-firma_F_contig10050:4376..4593Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10050 4377..4593 -
1696949392.0316107-CDS-S-firma_F_contig10050:4376..45931696949392.0316107-CDS-S-firma_F_contig10050:4376..4593Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10050 4377..4593 -
1622815529.5383875-CDS-S-firma_F_contig10050:4652..48221622815529.5383875-CDS-S-firma_F_contig10050:4652..4822Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10050 4653..4822 -
1696949392.0464199-CDS-S-firma_F_contig10050:4652..48221696949392.0464199-CDS-S-firma_F_contig10050:4652..4822Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10050 4653..4822 -
1622815529.5492601-CDS-S-firma_F_contig10050:4920..50551622815529.5492601-CDS-S-firma_F_contig10050:4920..5055Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10050 4921..5055 -
1696949392.055207-CDS-S-firma_F_contig10050:4920..50551696949392.055207-CDS-S-firma_F_contig10050:4920..5055Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10050 4921..5055 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815529.5647116-UTR-S-firma_F_contig10050:5055..50701622815529.5647116-UTR-S-firma_F_contig10050:5055..5070Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10050 5056..5070 -
1696949392.0908456-UTR-S-firma_F_contig10050:5055..50701696949392.0908456-UTR-S-firma_F_contig10050:5055..5070Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10050 5056..5070 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig10050.115.1

>prot_S-firma_F_contig10050.115.1 ID=prot_S-firma_F_contig10050.115.1|Name=mRNA_S-firma_F_contig10050.115.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=316bp
MTTRDKKAAERGFDPLLGRYRDAGAETATRAAAERARIAATNKARDKQLH
QMQTYDIINHRPVVAEPEPKPQRRGPASTRAPYNIVSNLDYKEHHHAPPE
ERPEGTFVPPRSLKNYVSHKADKRQYDILTNKYHEKHQEKDAVDREMARR
TAADRFWQTRDFNPVTGSYYDRAKESAFVEKRSEKEVEHVKTAGRTLPPS
FKGSEGAAYDILSHKTKDETTLKKVEAAQTRSVLTRVRHDVEDHLKSKGA
GSQDLELARAGNRISAKRHEERMAHGHDVLTNKPFRGIDSAPVHAPVAGR
AHKGVWSKIEQEEHMV
back to top

mRNA from alignment at S-firma_F_contig10050:3836..5070-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig10050.115.1 ID=mRNA_S-firma_F_contig10050.115.1|Name=mRNA_S-firma_F_contig10050.115.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=1235bp|location=Sequence derived from alignment at S-firma_F_contig10050:3836..5070- (Sphaerotrichia firma ET2_F female)
GACCCCGTCGTGCGTATGACGACCCGGGACAAGAAGGCCGCGGAGAGGGG GTTCGATCCCTTGCTTGGGCGCTACAGGGATGCCGGTGCAGAGACGGCTA CCAGGGCGGCGGCTGAGCGCGCACGTATTGCCGCCACCAACAAAGCCAGG GTACGCTCGTCCTTCTGTTTGCTGTGTGCTCTTGGGTATTTTTGCGTTAG TGTGCTGCTCCAACCTCCCCCCGTGCCCCATTCTCACCCCCACCCCAGGA CAAGCAACTACACCAGATGCAGACGTACGACATTATCAACCACCGCCCGG TGGTTGCGGAGCCCGAACCCAAGCCCCAACGCCGTGGCCCGGCGTCCACC CGTGCGCCGTACAACATTGTGAGCAACTTGGACTACAAGGAGCACCACCA CGCACCACCGGAGGAGAGGTACACGACTCCCCCCCCCCCCCACACTCTCC ACGCAGCCTCACGCCCCCACCCCACAGGCCGGAGGGGACATTTGTGCCGC CACGCAGCCTCAAGAACTACGTGTCCCACAAAGCCGACAAGCGCCAGTAC GACATTTTGACAAACAAGTACCACGAGAAGCACCAGGAGAAGGACGCCGT GGACCGGGAAATGGCACGCCGCACGGCTGCGGACCGCTTCTGGCAAACCC GGGACTTTAACCCTGTGACGGGCTCGTACTACGACCGTGCAAAGGTATGT GTGTGCGTGTGTGTTGGGTACCCCCCCCCTCACCCCACCGCCCCCCTCAG GAGTCAGCCTTTGTGGAGAAGCGGTCGGAGAAGGAAGTTGAGCACGTGAA GACGGCGGGGCGGACGTTGCCGCCGTCTTTCAAGGGGAGTGAGGGCGCGG CGTACGACATTCTGAGCCACAAAACAAAGGACGAAACGACGCTGAAGAAG GTGGAAGCCGCGCAGACTCGCAGCGTGTTGACACGGGTGCGGCATGATGT GGAGGACCACCTGAAGAGCAAGGGGGCTGGCAGCCAGGACCTTGGTGTGT GCCTCATTGTTGCAGGCTTTGTGACCCCTGTTTTCACCCCACGCCGCCCA CAGAGCTGGCACGTGCCGGGAACCGCATCTCTGCAAAGCGCCACGAGGAG CGCATGGCCCACGGCCACGACGTCCTCACAAACAAGCCGTTCCGGGGCAT TGATTCCGCGCCGGTGCACGCCCCCGTTGCTGGGCGGGCGCACAAGGGCG TGTGGTCCAAGATTGAGCAGGAGGAGCACATGGTG
back to top

Coding sequence (CDS) from alignment at S-firma_F_contig10050:3836..5070-

>mRNA_S-firma_F_contig10050.115.1 ID=mRNA_S-firma_F_contig10050.115.1|Name=mRNA_S-firma_F_contig10050.115.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1896bp|location=Sequence derived from alignment at S-firma_F_contig10050:3836..5070- (Sphaerotrichia firma ET2_F female)
ATGACGACCCGGGACAAGAAGGCCGCGGAGAGGGGGTTCGATCCCTTGCT
TGGGCGCTACAGGGATGCCGGTGCAGAGACGGCTACCAGGGCGGCGGCTG
AGCGCGCACGTATTGCCGCCACCAACAAAGCCAGGATGACGACCCGGGAC
AAGAAGGCCGCGGAGAGGGGGTTCGATCCCTTGCTTGGGCGCTACAGGGA
TGCCGGTGCAGAGACGGCTACCAGGGCGGCGGCTGAGCGCGCACGTATTG
CCGCCACCAACAAAGCCAGGGACAAGCAACTACACCAGATGCAGACGTAC
GACATTATCAACCACCGCCCGGTGGTTGCGGAGCCCGAACCCAAGCCCCA
ACGCCGTGGCCCGGCGTCCACCCGTGCGCCGTACAACATTGTGAGCAACT
TGGACTACAAGGAGCACCACCACGCACCACCGGAGGAGAGGACAAGCAAC
TACACCAGATGCAGACGTACGACATTATCAACCACCGCCCGGTGGTTGCG
GAGCCCGAACCCAAGCCCCAACGCCGTGGCCCGGCGTCCACCCGTGCGCC
GTACAACATTGTGAGCAACTTGGACTACAAGGAGCACCACCACGCACCAC
CGGAGGAGAGGCCGGAGGGGACATTTGTGCCGCCACGCAGCCTCAAGAAC
TACGTGTCCCACAAAGCCGACAAGCGCCAGTACGACATTTTGACAAACAA
GTACCACGAGAAGCACCAGGAGAAGGACGCCGTGGACCGGGAAATGGCAC
GCCGCACGGCTGCGGACCGCTTCTGGCAAACCCGGGACTTTAACCCTGTG
ACGGGCTCGTACTACGACCGTGCAAAGGCCGGAGGGGACATTTGTGCCGC
CACGCAGCCTCAAGAACTACGTGTCCCACAAAGCCGACAAGCGCCAGTAC
GACATTTTGACAAACAAGTACCACGAGAAGCACCAGGAGAAGGACGCCGT
GGACCGGGAAATGGCACGCCGCACGGCTGCGGACCGCTTCTGGCAAACCC
GGGACTTTAACCCTGTGACGGGCTCGTACTACGACCGTGCAAAGGAGTCA
GCCTTTGTGGAGAAGCGGTCGGAGAAGGAAGTTGAGCACGTGAAGACGGC
GGGGCGGACGTTGCCGCCGTCTTTCAAGGGGAGTGAGGGCGCGGCGTACG
ACATTCTGAGCCACAAAACAAAGGACGAAACGACGCTGAAGAAGGTGGAA
GCCGCGCAGACTCGCAGCGTGTTGACACGGGTGCGGCATGATGTGGAGGA
CCACCTGAAGAGCAAGGGGGCTGGCAGCCAGGACCTTGGAGTCAGCCTTT
GTGGAGAAGCGGTCGGAGAAGGAAGTTGAGCACGTGAAGACGGCGGGGCG
GACGTTGCCGCCGTCTTTCAAGGGGAGTGAGGGCGCGGCGTACGACATTC
TGAGCCACAAAACAAAGGACGAAACGACGCTGAAGAAGGTGGAAGCCGCG
CAGACTCGCAGCGTGTTGACACGGGTGCGGCATGATGTGGAGGACCACCT
GAAGAGCAAGGGGGCTGGCAGCCAGGACCTTGAGCTGGCACGTGCCGGGA
ACCGCATCTCTGCAAAGCGCCACGAGGAGCGCATGGCCCACGGCCACGAC
GTCCTCACAAACAAGCCGTTCCGGGGCATTGATTCCGCGCCGGTGCACGC
CCCCGTTGCTGGGCGGGCGCACAAGGGCGTGTGGTCCAAGATTGAGCAGG
AGGAGCACATGGTGAGCTGGCACGTGCCGGGAACCGCATCTCTGCAAAGC
GCCACGAGGAGCGCATGGCCCACGGCCACGACGTCCTCACAAACAAGCCG
TTCCGGGGCATTGATTCCGCGCCGGTGCACGCCCCCGTTGCTGGGCGGGC
GCACAAGGGCGTGTGGTCCAAGATTGAGCAGGAGGAGCACATGGTG
back to top