mRNA_S-firma_F_contig10029.91.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig10029.91.1
Unique NamemRNA_S-firma_F_contig10029.91.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
BLAST of mRNA_S-firma_F_contig10029.91.1 vs. uniprot
Match: A0A2K1L111_PHYPA (PPM-type phosphatase domain-containing protein n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1L111_PHYPA)

HSP 1 Score: 179 bits (455), Expect = 6.450e-51
Identity = 96/230 (41.74%), Postives = 147/230 (63.91%), Query Frame = 1
Query:    1 RTSFFAVYDGHLGKEASEFARDYLHHHLVRSSFFPDSLSEAMRDAYLATERSLLGVAA-ERGWESGSTAVTVLLQGDRVVVGHAGDARAVLCRAGQAVPLTKDHSPHSPAEVERIERDGSFVKDGMVYHLLGVARSFGDFDASLGRKIPG---VSAVPTISEFVLQDSDEFLLLACDGLWEVFSNEAAISFIRRDLQRGDASVQAVMDRLVQQAVYRGTTDNVTALLVSF 678
            R +F+ V+DGH G+ A+ + +++L   ++R + F  S+ +A+++AYL  ++  L      +   SG+T +T LLQG  ++V +AGD RAVLCR G+AVP+++DH P +  E  RIE  G +V DG +   L VAR+ GD+     +++ G   +SAVP I   VL + DEFLL+ CDGLW+VFSNE AISF R+ LQR +   +     LV++A+ R + DNVT +++ F
Sbjct:  138 RGAFYGVFDGHDGESAACYVKEHLLPFILRDASFSSSVEDAVKNAYLELDKEFLEACRLNKSLSSGTTVLTALLQGRNLLVANAGDCRAVLCRKGRAVPMSRDHVPSAAWERSRIESAGGYVIDGYINEQLTVARAIGDWHMKGLKEVGGKGPLSAVPDIQSLVLSEDDEFLLMGCDGLWDVFSNENAISFARKQLQRHN-DPELCSKELVEEALKRNSQDNVTVIVICF 366          
BLAST of mRNA_S-firma_F_contig10029.91.1 vs. uniprot
Match: A0A0G4J3H9_PLABS (PPM-type phosphatase domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J3H9_PLABS)

HSP 1 Score: 176 bits (447), Expect = 2.760e-50
Identity = 95/232 (40.95%), Postives = 139/232 (59.91%), Query Frame = 1
Query:   10 FFAVYDGHLGKEASEFARDYLHHHLVRSSFFPDSLSEAMRDAYLATERSLLGVAAERGWESGSTAVTVLLQGD--RVVVGHAGDARAVLCRAGQAVPLTKDHSPHSPAEVERIERDGSFVKDGMVYHLLGVARSFGDFDASLGRKIPGVSAVPTISEFVLQDSDEFLLLACDGLWEVFSNEAAISFIRRDLQRGDASVQAVMDRLVQQAVYRGTTDNVTALLVSFHLRDHFS 699
            +  ++DGH G  A+EF + YLH ++ RS  F  +++EAM   +L T+R  L  A     ESGS  V+ +       + + HAGD+RAVLCR GQA+ LT DH P S  E  R+E++G  V+  M+  +L V+R+ GDFD  LG K  G++A P      +  +DEF++LACDGLW+V  +E A+ F+R  L   D SV A  + LVQ+A+ R + DN+T +++ F   D  S
Sbjct:   73 YVGLFDGHAGVAAAEFCKRYLHENIARSVPFSRNMAEAMVKGFLLTDRQFLDTARLSNEESGSVCVSAIYSASDSTLTIAHAGDSRAVLCRGGQAILLTDDHKPTSLEERVRVEKNGGTVEWDMLNGVLDVSRAIGDFDRDLGLKTKGLTAQPETQLVNIDAADEFVILACDGLWDVIGSEEAVQFVRSHLYAHD-SVDAASEFLVQEAIRRQSDDNITVIVIGFQKLDAVS 303          
BLAST of mRNA_S-firma_F_contig10029.91.1 vs. uniprot
Match: A0A2K1L9G4_PHYPA (PPM-type phosphatase domain-containing protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1L9G4_PHYPA)

HSP 1 Score: 176 bits (446), Expect = 1.420e-49
Identity = 98/231 (42.42%), Postives = 144/231 (62.34%), Query Frame = 1
Query:    1 RTSFFAVYDGHLGKEASEFARDYLHHHLVRSSFFPDSLSEAMRDAYLATERSLLGVAA-ERGWESGSTAVTVLLQGDRVVVGHAGDARAVLCRAGQAVPLTKDHSPHSPAEVERIERDGSFVKDGMVYHLLGVARSFGDFDAS----LGRKIPGVSAVPTISEFVLQDSDEFLLLACDGLWEVFSNEAAISFIRRDLQRGDASVQAVMDRLVQQAVYRGTTDNVTALLVSF 678
            R +F+ V+DGH G+ A+ + +++L   ++R   FP  + +A+++AYL  ++  L     +    SG+T +T LLQG  ++V +AGD RAVLCR GQAVP+++DH P S  E  RIE  G +V DG V   + VAR+ GD+        G K P +SA+P +   VL + DEFLL+ CDGLWEVF+NE AISF R+ LQR +   +     LV +A+ R + DNVT +++ F
Sbjct:  138 RGAFYGVFDGHDGEAAACYVKEHLLPFILRDVSFPTCVEDAVKNAYLELDKEFLEACRLDDSLSSGTTVLTALLQGRNLLVANAGDCRAVLCRKGQAVPMSQDHDPSSAWEKSRIESVGGYVVDGYVNGQVTVARAIGDWHMQGLKEAGGKGP-LSALPDVKSLVLSEDDEFLLMGCDGLWEVFTNEGAISFARKQLQRHN-DPELCSKELVVEALRRNSQDNVTVIVICF 366          
BLAST of mRNA_S-firma_F_contig10029.91.1 vs. uniprot
Match: A9S9Z7_PHYPA (PPM-type phosphatase domain-containing protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9S9Z7_PHYPA)

HSP 1 Score: 172 bits (435), Expect = 7.580e-49
Identity = 99/233 (42.49%), Postives = 144/233 (61.80%), Query Frame = 1
Query:    1 RTSFFAVYDGHLGKEASEFARDYLHHHLVRSSFFPDSLSEAMRDAYLATERSLLGVAA-ERGWESGSTAVTVLLQGDRV--VVGHAGDARAVLCRAGQAVPLTKDHSPHSPAEVERIERDGSFVKDGMVYHLLGVARSFGDFDAS----LGRKIPGVSAVPTISEFVLQDSDEFLLLACDGLWEVFSNEAAISFIRRDLQRGDASVQAVMDRLVQQAVYRGTTDNVTALLVSF 678
            R +F+ V+DGH G+ A+ + +++L   ++R   FP  + +A+++AYL  ++  L     +    SG+T +T LLQG  V  +V +AGD RAVLCR GQAVP+++DH P S  E  RIE  G +V DG V   + VAR+ GD+        G K P +SA+P +   VL + DEFLL+ CDGLWEVF+NE AISF R+ LQR +   +     LV +A+ R + DNVT +++ F
Sbjct:   49 RGAFYGVFDGHDGEAAACYVKEHLLPFILRDVSFPTCVEDAVKNAYLELDKEFLEACRLDDSLSSGTTVLTALLQGRSVNLLVANAGDCRAVLCRKGQAVPMSQDHDPSSAWEKSRIESVGGYVVDGYVNGQVTVARAIGDWHMQGLKEAGGKGP-LSALPDVKSLVLSEDDEFLLMGCDGLWEVFTNEGAISFARKQLQRHN-DPELCSKELVVEALRRNSQDNVTVIVICF 279          
BLAST of mRNA_S-firma_F_contig10029.91.1 vs. uniprot
Match: D8SFH8_SELML (PPM-type phosphatase domain-containing protein (Fragment) n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SFH8_SELML)

HSP 1 Score: 168 bits (425), Expect = 1.520e-47
Identity = 94/233 (40.34%), Postives = 142/233 (60.94%), Query Frame = 1
Query:    7 SFFAVYDGHLGKEASEFARDYLHHHLVRSSFFPDSLSEAMRDAYLATERSLLGVAA-ERGWESGSTAVTVLLQGDRVVVGHAGDARAVLCRAGQAVPLTKDHSPHSPAEVERIERDGSFVKDGMVYHLLGVARSFGDF--------DASLGRKIPGVSAVPTISEFVLQDSDEFLLLACDGLWEVFSNEAAISFIRRDLQRGDASVQAVMDRLVQQAVYRGTTDNVTALLVSF 678
            SF+ V+DGHLGK+A++F R+ L   +V  + FP +L EA++ A+L T+R+       +    SG+TA+TVL+ G  ++V + GD RAVLCR G+AVP+++DH P    E  RIE  G FV DG +   L VAR+ GD+        D   G     +S  P + +  L + DEFL++ CDGLW+ FS++ A++F RR LQ+ +   +   D L+ +A+ R T+DN+T + V F
Sbjct:   44 SFYGVFDGHLGKDAAQFVRENLLKFIVEDTAFPAALEEAVKRAFLRTDRAFAQACQIDSELASGTTALTVLIFGRTLLVANVGDCRAVLCRRGRAVPMSRDHKPSCVEEKSRIESLGGFVDDGYLNGQLSVARALGDWHLEGLKADDDDGGSSSGPLSGEPEMRQAELTEDDEFLIIGCDGLWDAFSSQDAVTFARRRLQQHNDPEKCSKD-LIVEALKRDTSDNLTVVTVCF 275          
BLAST of mRNA_S-firma_F_contig10029.91.1 vs. uniprot
Match: UPI001CB8ABDD (probable protein phosphatase 2C 49 isoform X1 n=2 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB8ABDD)

HSP 1 Score: 166 bits (421), Expect = 1.230e-46
Identity = 93/234 (39.74%), Postives = 144/234 (61.54%), Query Frame = 1
Query:    4 TSFFAVYDGHLGKEASEFARDYLHHHLVRSS--FFPDSLSEAMRDAYLATERSLLGVAAERGWESGSTAVTVLLQGDRVVVGHAGDARAVLCRAGQAVPLTKDHSPHSPAEVERIERDGSFVKDGMVYHLLGVARSFGDFDASLGR-KIPGVSAVPTISEFVLQDSDEFLLLACDGLWEVFSNEAAISFIRRDLQRGDASVQAVMDRLVQQAVYRGTTDNVTALLVSFHLRDHF 696
            T+F+ V+DGH G+EA+ + ++ +     ++   +  D + +++R+A+L  + S L   +  G  SG+TA+T LL G  +VV +AGD RAVLCR G+A+ ++ DH P  P E  RIE  G FV DG +  +L V R+ GD+D  L       + A P I + +L + DEFL+L CDG+W+V S++ A+S +RR L+R D   Q   D LV++A+  GT DN+T ++V F   D+F
Sbjct:   78 TAFYGVFDGHGGQEAAAYLKNNVTRLFFQNEQIYQGDDVEKSLREAFLLAD-SALADDSSVGSSSGTTALTALLLGRLLVVANAGDCRAVLCRKGEAIDMSNDHRPTHPTERRRIEELGGFVDDGYLNGVLSVTRALGDWDMKLALGTASSLIADPEIQQMILTEDDEFLILGCDGIWDVLSSQQAVSRVRRGLRRHDDPEQCAKD-LVREALRLGTYDNLTVIVVCFTSMDYF 309          
BLAST of mRNA_S-firma_F_contig10029.91.1 vs. uniprot
Match: A0A6A2XI72_HIBSY (Protein-serine/threonine phosphatase n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2XI72_HIBSY)

HSP 1 Score: 165 bits (418), Expect = 6.580e-46
Identity = 91/231 (39.39%), Postives = 141/231 (61.04%), Query Frame = 1
Query:    7 SFFAVYDGHLGKEASEFARDYLHHHLVRSSFFPDSLSEAMRDAYLATERSLL-GVAAERGWESGSTAVTVLLQGDRVVVGHAGDARAVLCRAGQAVPLTKDHSPHSPAEVERIERDGSFVKDGMVYHLLGVARSFGDFDAS----LGRKIPGVSAVPTISEFVLQDSDEFLLLACDGLWEVFSNEAAISFIRRDLQRGDASVQAVMDRLVQQAVYRGTTDNVTALLVSFHL 684
            SF+ V+DGH GK+AS+F RD+L   +V  + FP  L +A+  +++ T+ +     + E    SG+TA+T ++ G  ++V +AGD+RAVL R G A+ ++KDH P    E  RIE  G FV DG +   LGV R+ GD+       +G +I  + A P +    L   DEFL++  DG+W+VF+ + A+ F RR LQ+ +  V+     +V++A+ RG TDN+T +LV+FHL
Sbjct:  103 SFYGVFDGHGGKDASQFVRDHLPRVIVEDADFPLGLEKAVTRSFMETDAAFAKSCSIESAQASGTTALTAMIFGRSLLVANAGDSRAVLSRLGTAIEMSKDHRPCCMKERRRIESLGGFVDDGYLNGQLGVTRALGDWHLEGMKEVGERIGPLIAEPELKMITLTKEDEFLIIGSDGIWDVFTTQNAVDFTRRRLQQHN-DVKLCCKEIVEEALKRGATDNLTVVLVAFHL 332          
BLAST of mRNA_S-firma_F_contig10029.91.1 vs. uniprot
Match: A0A6P4LRE9_GOSAR (Protein-serine/threonine phosphatase n=26 Tax=Gossypium TaxID=3633 RepID=A0A6P4LRE9_GOSAR)

HSP 1 Score: 165 bits (418), Expect = 1.040e-45
Identity = 90/231 (38.96%), Postives = 141/231 (61.04%), Query Frame = 1
Query:    7 SFFAVYDGHLGKEASEFARDYLHHHLVRSSFFPDSLSEAMRDAYLATERSLL-GVAAERGWESGSTAVTVLLQGDRVVVGHAGDARAVLCRAGQAVPLTKDHSPHSPAEVERIERDGSFVKDGMVYHLLGVARSFGDFDAS----LGRKIPGVSAVPTISEFVLQDSDEFLLLACDGLWEVFSNEAAISFIRRDLQRGDASVQAVMDRLVQQAVYRGTTDNVTALLVSFHL 684
            SF+ V+DGH GK+AS+F RD+L   +V  + FP  + +A+  +++ T+ +     + E    SG+TA+T ++ G  ++V +AGD+RAVL R G A+ ++KDH P    E  RIE  G F+ DG +   LGV R+ G++       +G +I  +SA P +    L   DEFL++  DG+W+VF+++ A+ F RR LQ  +  V+     +V +A+ RG TDN+T +LVSFHL
Sbjct:  123 SFYGVFDGHGGKDASQFVRDHLPRVIVEDADFPLDIEKAVTRSFMETDAAFAKSCSLESALTSGTTALTAMIFGRSLLVANAGDSRAVLSRCGTAIEMSKDHRPCCMKERRRIESLGGFIDDGYLNGQLGVTRALGNWHLEGMKEMGERIGPLSAEPELKMITLTKEDEFLIIGSDGIWDVFTSQNAVDFTRRRLQEHN-DVKLCCREMVGEAIKRGATDNLTVVLVSFHL 352          
BLAST of mRNA_S-firma_F_contig10029.91.1 vs. uniprot
Match: A0A166HHU2_DAUCS (Protein-serine/threonine phosphatase n=2 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A166HHU2_DAUCS)

HSP 1 Score: 163 bits (412), Expect = 1.680e-45
Identity = 90/240 (37.50%), Postives = 140/240 (58.33%), Query Frame = 1
Query:    7 SFFAVYDGHLGKEASEFARDYLHHHLVRSSFFPDS----------LSEAMRDAYLATERSLLGVAAERGWESGSTAVTVLLQGDRVVVGHAGDARAVLCRAGQAVPLTKDHSPHSPAEVERIERDGSFVKDGMVYHLLGVARSFGDFDASLGRKIPG-VSAVPTISEFVLQDSDEFLLLACDGLWEVFSNEAAISFIRRDLQRGDASVQAVMDRLVQQAVYRGTTDNVTALLVSFHLRDH 693
            +F+ V+DGH G EA+ + R  ++        FP S          +  ++R A+L  + +L    +     SG+TA+T ++ G R++V +AGD RAVLCR G+A+ +++DH P    E +R+E  G F+ DG +  +L V R+ GD+D  L R  P  + A P + + VL + DEFL++ACDG+W+V S++ AIS +RR L+R D   Q   D LV +A+   T DN+T ++V F   DH
Sbjct:   46 AFYGVFDGHGGPEAAAYVRKNVNKFFFEDVNFPQSSEVDDAFLEAVGSSLRQAFLLADAALADDCSV-STSSGTTALTAIVLGSRLLVANAGDCRAVLCRKGEAIEMSQDHRPSHALERKRVEELGGFIDDGYLNGVLSVTRALGDWDLKLSRGNPSPLIAEPDVKQIVLTEDDEFLIIACDGIWDVLSSQQAISLVRRGLRRHDDPGQCARD-LVMEALRLNTFDNLTVIIVCFTSLDH 283          
BLAST of mRNA_S-firma_F_contig10029.91.1 vs. uniprot
Match: A0A067K1U0_JATCU (Protein-serine/threonine phosphatase n=1 Tax=Jatropha curcas TaxID=180498 RepID=A0A067K1U0_JATCU)

HSP 1 Score: 164 bits (416), Expect = 2.300e-45
Identity = 88/232 (37.93%), Postives = 142/232 (61.21%), Query Frame = 1
Query:    7 SFFAVYDGHLGKEASEFARDYLHHHLVRSSFFPDSLSEAMRDAYLATERSLLGV-AAERGWESGSTAVTVLLQGDRVVVGHAGDARAVLCRAGQAVPLTKDHSPHSPAEVERIERDGSFVKDGMVYHLLGVARSFGDFDASLGRKIPG-----VSAVPTISEFVLQDSDEFLLLACDGLWEVFSNEAAISFIRRDLQRGDASVQAVMDRLVQQAVYRGTTDNVTALLVSFHL 684
            SF+ V+DGH GK A++F RDYL   +V  + FP  L + +  +++ T+ +L    + E    SG+TA+T ++ G  ++V +AGD RAVL R G A+ +++DH P    E  R+E  G +++DG +   LGV R+ GD+    G K+ G     +SA P +    L   DEFL++  DG+W+VF+++ ++SF RR LQ  +  V+     +V++A+ RG TDN+T +++SFHL
Sbjct:  128 SFYGVFDGHGGKNAAQFVRDYLPKVIVEDADFPLELEKVVTRSFIETDAALAETYSLESALSSGTTALTAMIFGRSLLVANAGDCRAVLSRHGAAIEMSRDHRPCCVKERTRVESLGGYIEDGYLNGQLGVTRALGDWHLE-GMKVKGESGGLLSAEPELKSITLTKEDEFLIIGSDGIWDVFTSQNSVSFARRKLQEHN-DVKLCCKEMVEEAIRRGATDNLTVVMISFHL 357          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10029.91.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2K1L111_PHYPA6.450e-5141.74PPM-type phosphatase domain-containing protein n=3... [more]
A0A0G4J3H9_PLABS2.760e-5040.95PPM-type phosphatase domain-containing protein n=1... [more]
A0A2K1L9G4_PHYPA1.420e-4942.42PPM-type phosphatase domain-containing protein n=1... [more]
A9S9Z7_PHYPA7.580e-4942.49PPM-type phosphatase domain-containing protein n=1... [more]
D8SFH8_SELML1.520e-4740.34PPM-type phosphatase domain-containing protein (Fr... [more]
UPI001CB8ABDD1.230e-4639.74probable protein phosphatase 2C 49 isoform X1 n=2 ... [more]
A0A6A2XI72_HIBSY6.580e-4639.39Protein-serine/threonine phosphatase n=1 Tax=Hibis... [more]
A0A6P4LRE9_GOSAR1.040e-4538.96Protein-serine/threonine phosphatase n=26 Tax=Goss... [more]
A0A166HHU2_DAUCS1.680e-4537.50Protein-serine/threonine phosphatase n=2 Tax=Daucu... [more]
A0A067K1U0_JATCU2.300e-4537.93Protein-serine/threonine phosphatase n=1 Tax=Jatro... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10029contigS-firma_F_contig10029:2194..2964 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Seed ortholog3218.PP1S84_221V6.1
PFAMsPP2C
Max annot lvl35493|Streptophyta
KEGG koko:K14803
GOsGO:0002682,GO:0002697,GO:0002831,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0008150,GO:0031347,GO:0032101,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043900,GO:0044424,GO:0044444,GO:0044464,GO:0048583,GO:0050688,GO:0050789,GO:0065007,GO:0080134
Evalue1.06e-51
EggNOG OGsCOG0631@1|root,KOG0698@2759|Eukaryota,37I5Q@33090|Viridiplantae,3GDKT@35493|Streptophyta
EC3.1.3.16
Descriptionphosphatase 2C
COG categoryT
BRITEko00000,ko01000,ko01009,ko03009
Hectar predicted targeting categoryother localisation
Exons2
Model size699
Cds size699
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815526.7838185-CDS-S-firma_F_contig10029:2193..22461622815526.7838185-CDS-S-firma_F_contig10029:2193..2246Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10029 2194..2246 +
1696949389.36682-CDS-S-firma_F_contig10029:2193..22461696949389.36682-CDS-S-firma_F_contig10029:2193..2246Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10029 2194..2246 +
1622815526.7993011-CDS-S-firma_F_contig10029:2318..29641622815526.7993011-CDS-S-firma_F_contig10029:2318..2964Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10029 2319..2964 +
1696949389.384845-CDS-S-firma_F_contig10029:2318..29641696949389.384845-CDS-S-firma_F_contig10029:2318..2964Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10029 2319..2964 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10029.91.1prot_S-firma_F_contig10029.91.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig10029 2194..2964 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig10029.91.1

>prot_S-firma_F_contig10029.91.1 ID=prot_S-firma_F_contig10029.91.1|Name=mRNA_S-firma_F_contig10029.91.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=233bp
RTSFFAVYDGHLGKEASEFARDYLHHHLVRSSFFPDSLSEAMRDAYLATE
RSLLGVAAERGWESGSTAVTVLLQGDRVVVGHAGDARAVLCRAGQAVPLT
KDHSPHSPAEVERIERDGSFVKDGMVYHLLGVARSFGDFDASLGRKIPGV
SAVPTISEFVLQDSDEFLLLACDGLWEVFSNEAAISFIRRDLQRGDASVQ
AVMDRLVQQAVYRGTTDNVTALLVSFHLRDHFS
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mRNA from alignment at S-firma_F_contig10029:2194..2964+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig10029.91.1 ID=mRNA_S-firma_F_contig10029.91.1|Name=mRNA_S-firma_F_contig10029.91.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=771bp|location=Sequence derived from alignment at S-firma_F_contig10029:2194..2964+ (Sphaerotrichia firma ET2_F female)
CGCACCTCCTTTTTTGCCGTGTACGACGGCCACCTGGGCAAGGAGGCGTC AGAGTGCGTCCCTGCGTTGCGTGTGCTGTGCAGGGTGTACCATGGGGTTG TTGACCTCCTCCTCTTGACCCCCAGGTTTGCCCGTGACTACCTGCACCAC CACCTTGTGCGGTCGTCCTTTTTCCCAGACTCCCTGTCGGAGGCCATGCG GGACGCGTACCTGGCCACGGAGCGCAGCCTGCTGGGGGTTGCGGCGGAGC GCGGGTGGGAGTCAGGCTCCACCGCCGTCACGGTGCTGCTGCAGGGCGAC CGGGTGGTTGTCGGCCACGCGGGGGACGCGCGGGCGGTGCTGTGCCGCGC GGGGCAGGCCGTGCCCCTCACCAAGGACCACAGCCCGCACAGCCCCGCGG AGGTGGAGCGCATTGAACGCGACGGGTCCTTTGTGAAGGACGGCATGGTG TACCACTTGCTGGGCGTCGCGCGGTCGTTTGGGGACTTCGACGCCTCCCT GGGGCGCAAAATCCCGGGCGTGAGCGCCGTCCCCACCATCTCCGAGTTTG TGCTGCAGGACTCGGACGAGTTCCTCCTCCTTGCCTGCGACGGCCTTTGG GAGGTCTTCTCCAACGAGGCCGCCATTTCCTTCATTCGCCGCGACCTCCA ACGCGGGGACGCCTCCGTGCAGGCCGTCATGGACCGCCTGGTGCAGCAAG CCGTGTACCGGGGGACGACGGACAACGTGACGGCCCTCCTGGTGTCCTTC CACCTCCGGGACCACTTCAGC
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Coding sequence (CDS) from alignment at S-firma_F_contig10029:2194..2964+

>mRNA_S-firma_F_contig10029.91.1 ID=mRNA_S-firma_F_contig10029.91.1|Name=mRNA_S-firma_F_contig10029.91.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1398bp|location=Sequence derived from alignment at S-firma_F_contig10029:2194..2964+ (Sphaerotrichia firma ET2_F female)
CGCACCTCCTTTTTTGCCGTGTACGACGGCCACCTGGGCAAGGAGGCGTC
AGACGCACCTCCTTTTTTGCCGTGTACGACGGCCACCTGGGCAAGGAGGC
GTCAGAGTTTGCCCGTGACTACCTGCACCACCACCTTGTGCGGTCGTCCT
TTTTCCCAGACTCCCTGTCGGAGGCCATGCGGGACGCGTACCTGGCCACG
GAGCGCAGCCTGCTGGGGGTTGCGGCGGAGCGCGGGTGGGAGTCAGGCTC
CACCGCCGTCACGGTGCTGCTGCAGGGCGACCGGGTGGTTGTCGGCCACG
CGGGGGACGCGCGGGCGGTGCTGTGCCGCGCGGGGCAGGCCGTGCCCCTC
ACCAAGGACCACAGCCCGCACAGCCCCGCGGAGGTGGAGCGCATTGAACG
CGACGGGTCCTTTGTGAAGGACGGCATGGTGTACCACTTGCTGGGCGTCG
CGCGGTCGTTTGGGGACTTCGACGCCTCCCTGGGGCGCAAAATCCCGGGC
GTGAGCGCCGTCCCCACCATCTCCGAGTTTGTGCTGCAGGACTCGGACGA
GTTCCTCCTCCTTGCCTGCGACGGCCTTTGGGAGGTCTTCTCCAACGAGG
CCGCCATTTCCTTCATTCGCCGCGACCTCCAACGCGGGGACGCCTCCGTG
CAGGCCGTCATGGACCGCCTGGTGCAGCAAGCCGTGTACCGGGGGACGAC
GGACAACGTGACGGCCCTCCTGGTGTCCTTCCACCTCCGGGACCACTTCA
GCGTTTGCCCGTGACTACCTGCACCACCACCTTGTGCGGTCGTCCTTTTT
CCCAGACTCCCTGTCGGAGGCCATGCGGGACGCGTACCTGGCCACGGAGC
GCAGCCTGCTGGGGGTTGCGGCGGAGCGCGGGTGGGAGTCAGGCTCCACC
GCCGTCACGGTGCTGCTGCAGGGCGACCGGGTGGTTGTCGGCCACGCGGG
GGACGCGCGGGCGGTGCTGTGCCGCGCGGGGCAGGCCGTGCCCCTCACCA
AGGACCACAGCCCGCACAGCCCCGCGGAGGTGGAGCGCATTGAACGCGAC
GGGTCCTTTGTGAAGGACGGCATGGTGTACCACTTGCTGGGCGTCGCGCG
GTCGTTTGGGGACTTCGACGCCTCCCTGGGGCGCAAAATCCCGGGCGTGA
GCGCCGTCCCCACCATCTCCGAGTTTGTGCTGCAGGACTCGGACGAGTTC
CTCCTCCTTGCCTGCGACGGCCTTTGGGAGGTCTTCTCCAACGAGGCCGC
CATTTCCTTCATTCGCCGCGACCTCCAACGCGGGGACGCCTCCGTGCAGG
CCGTCATGGACCGCCTGGTGCAGCAAGCCGTGTACCGGGGGACGACGGAC
AACGTGACGGCCCTCCTGGTGTCCTTCCACCTCCGGGACCACTTCAGC
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