mRNA_S-firma_F_contig10029.91.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10029.91.1 vs. uniprot
Match: A0A2K1L111_PHYPA (PPM-type phosphatase domain-containing protein n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1L111_PHYPA) HSP 1 Score: 179 bits (455), Expect = 6.450e-51 Identity = 96/230 (41.74%), Postives = 147/230 (63.91%), Query Frame = 1
Query: 1 RTSFFAVYDGHLGKEASEFARDYLHHHLVRSSFFPDSLSEAMRDAYLATERSLLGVAA-ERGWESGSTAVTVLLQGDRVVVGHAGDARAVLCRAGQAVPLTKDHSPHSPAEVERIERDGSFVKDGMVYHLLGVARSFGDFDASLGRKIPG---VSAVPTISEFVLQDSDEFLLLACDGLWEVFSNEAAISFIRRDLQRGDASVQAVMDRLVQQAVYRGTTDNVTALLVSF 678
R +F+ V+DGH G+ A+ + +++L ++R + F S+ +A+++AYL ++ L + SG+T +T LLQG ++V +AGD RAVLCR G+AVP+++DH P + E RIE G +V DG + L VAR+ GD+ +++ G +SAVP I VL + DEFLL+ CDGLW+VFSNE AISF R+ LQR + + LV++A+ R + DNVT +++ F
Sbjct: 138 RGAFYGVFDGHDGESAACYVKEHLLPFILRDASFSSSVEDAVKNAYLELDKEFLEACRLNKSLSSGTTVLTALLQGRNLLVANAGDCRAVLCRKGRAVPMSRDHVPSAAWERSRIESAGGYVIDGYINEQLTVARAIGDWHMKGLKEVGGKGPLSAVPDIQSLVLSEDDEFLLMGCDGLWDVFSNENAISFARKQLQRHN-DPELCSKELVEEALKRNSQDNVTVIVICF 366
BLAST of mRNA_S-firma_F_contig10029.91.1 vs. uniprot
Match: A0A0G4J3H9_PLABS (PPM-type phosphatase domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J3H9_PLABS) HSP 1 Score: 176 bits (447), Expect = 2.760e-50 Identity = 95/232 (40.95%), Postives = 139/232 (59.91%), Query Frame = 1
Query: 10 FFAVYDGHLGKEASEFARDYLHHHLVRSSFFPDSLSEAMRDAYLATERSLLGVAAERGWESGSTAVTVLLQGD--RVVVGHAGDARAVLCRAGQAVPLTKDHSPHSPAEVERIERDGSFVKDGMVYHLLGVARSFGDFDASLGRKIPGVSAVPTISEFVLQDSDEFLLLACDGLWEVFSNEAAISFIRRDLQRGDASVQAVMDRLVQQAVYRGTTDNVTALLVSFHLRDHFS 699
+ ++DGH G A+EF + YLH ++ RS F +++EAM +L T+R L A ESGS V+ + + + HAGD+RAVLCR GQA+ LT DH P S E R+E++G V+ M+ +L V+R+ GDFD LG K G++A P + +DEF++LACDGLW+V +E A+ F+R L D SV A + LVQ+A+ R + DN+T +++ F D S
Sbjct: 73 YVGLFDGHAGVAAAEFCKRYLHENIARSVPFSRNMAEAMVKGFLLTDRQFLDTARLSNEESGSVCVSAIYSASDSTLTIAHAGDSRAVLCRGGQAILLTDDHKPTSLEERVRVEKNGGTVEWDMLNGVLDVSRAIGDFDRDLGLKTKGLTAQPETQLVNIDAADEFVILACDGLWDVIGSEEAVQFVRSHLYAHD-SVDAASEFLVQEAIRRQSDDNITVIVIGFQKLDAVS 303
BLAST of mRNA_S-firma_F_contig10029.91.1 vs. uniprot
Match: A0A2K1L9G4_PHYPA (PPM-type phosphatase domain-containing protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1L9G4_PHYPA) HSP 1 Score: 176 bits (446), Expect = 1.420e-49 Identity = 98/231 (42.42%), Postives = 144/231 (62.34%), Query Frame = 1
Query: 1 RTSFFAVYDGHLGKEASEFARDYLHHHLVRSSFFPDSLSEAMRDAYLATERSLLGVAA-ERGWESGSTAVTVLLQGDRVVVGHAGDARAVLCRAGQAVPLTKDHSPHSPAEVERIERDGSFVKDGMVYHLLGVARSFGDFDAS----LGRKIPGVSAVPTISEFVLQDSDEFLLLACDGLWEVFSNEAAISFIRRDLQRGDASVQAVMDRLVQQAVYRGTTDNVTALLVSF 678
R +F+ V+DGH G+ A+ + +++L ++R FP + +A+++AYL ++ L + SG+T +T LLQG ++V +AGD RAVLCR GQAVP+++DH P S E RIE G +V DG V + VAR+ GD+ G K P +SA+P + VL + DEFLL+ CDGLWEVF+NE AISF R+ LQR + + LV +A+ R + DNVT +++ F
Sbjct: 138 RGAFYGVFDGHDGEAAACYVKEHLLPFILRDVSFPTCVEDAVKNAYLELDKEFLEACRLDDSLSSGTTVLTALLQGRNLLVANAGDCRAVLCRKGQAVPMSQDHDPSSAWEKSRIESVGGYVVDGYVNGQVTVARAIGDWHMQGLKEAGGKGP-LSALPDVKSLVLSEDDEFLLMGCDGLWEVFTNEGAISFARKQLQRHN-DPELCSKELVVEALRRNSQDNVTVIVICF 366
BLAST of mRNA_S-firma_F_contig10029.91.1 vs. uniprot
Match: A9S9Z7_PHYPA (PPM-type phosphatase domain-containing protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9S9Z7_PHYPA) HSP 1 Score: 172 bits (435), Expect = 7.580e-49 Identity = 99/233 (42.49%), Postives = 144/233 (61.80%), Query Frame = 1
Query: 1 RTSFFAVYDGHLGKEASEFARDYLHHHLVRSSFFPDSLSEAMRDAYLATERSLLGVAA-ERGWESGSTAVTVLLQGDRV--VVGHAGDARAVLCRAGQAVPLTKDHSPHSPAEVERIERDGSFVKDGMVYHLLGVARSFGDFDAS----LGRKIPGVSAVPTISEFVLQDSDEFLLLACDGLWEVFSNEAAISFIRRDLQRGDASVQAVMDRLVQQAVYRGTTDNVTALLVSF 678
R +F+ V+DGH G+ A+ + +++L ++R FP + +A+++AYL ++ L + SG+T +T LLQG V +V +AGD RAVLCR GQAVP+++DH P S E RIE G +V DG V + VAR+ GD+ G K P +SA+P + VL + DEFLL+ CDGLWEVF+NE AISF R+ LQR + + LV +A+ R + DNVT +++ F
Sbjct: 49 RGAFYGVFDGHDGEAAACYVKEHLLPFILRDVSFPTCVEDAVKNAYLELDKEFLEACRLDDSLSSGTTVLTALLQGRSVNLLVANAGDCRAVLCRKGQAVPMSQDHDPSSAWEKSRIESVGGYVVDGYVNGQVTVARAIGDWHMQGLKEAGGKGP-LSALPDVKSLVLSEDDEFLLMGCDGLWEVFTNEGAISFARKQLQRHN-DPELCSKELVVEALRRNSQDNVTVIVICF 279
BLAST of mRNA_S-firma_F_contig10029.91.1 vs. uniprot
Match: D8SFH8_SELML (PPM-type phosphatase domain-containing protein (Fragment) n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SFH8_SELML) HSP 1 Score: 168 bits (425), Expect = 1.520e-47 Identity = 94/233 (40.34%), Postives = 142/233 (60.94%), Query Frame = 1
Query: 7 SFFAVYDGHLGKEASEFARDYLHHHLVRSSFFPDSLSEAMRDAYLATERSLLGVAA-ERGWESGSTAVTVLLQGDRVVVGHAGDARAVLCRAGQAVPLTKDHSPHSPAEVERIERDGSFVKDGMVYHLLGVARSFGDF--------DASLGRKIPGVSAVPTISEFVLQDSDEFLLLACDGLWEVFSNEAAISFIRRDLQRGDASVQAVMDRLVQQAVYRGTTDNVTALLVSF 678
SF+ V+DGHLGK+A++F R+ L +V + FP +L EA++ A+L T+R+ + SG+TA+TVL+ G ++V + GD RAVLCR G+AVP+++DH P E RIE G FV DG + L VAR+ GD+ D G +S P + + L + DEFL++ CDGLW+ FS++ A++F RR LQ+ + + D L+ +A+ R T+DN+T + V F
Sbjct: 44 SFYGVFDGHLGKDAAQFVRENLLKFIVEDTAFPAALEEAVKRAFLRTDRAFAQACQIDSELASGTTALTVLIFGRTLLVANVGDCRAVLCRRGRAVPMSRDHKPSCVEEKSRIESLGGFVDDGYLNGQLSVARALGDWHLEGLKADDDDGGSSSGPLSGEPEMRQAELTEDDEFLIIGCDGLWDAFSSQDAVTFARRRLQQHNDPEKCSKD-LIVEALKRDTSDNLTVVTVCF 275
BLAST of mRNA_S-firma_F_contig10029.91.1 vs. uniprot
Match: UPI001CB8ABDD (probable protein phosphatase 2C 49 isoform X1 n=2 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB8ABDD) HSP 1 Score: 166 bits (421), Expect = 1.230e-46 Identity = 93/234 (39.74%), Postives = 144/234 (61.54%), Query Frame = 1
Query: 4 TSFFAVYDGHLGKEASEFARDYLHHHLVRSS--FFPDSLSEAMRDAYLATERSLLGVAAERGWESGSTAVTVLLQGDRVVVGHAGDARAVLCRAGQAVPLTKDHSPHSPAEVERIERDGSFVKDGMVYHLLGVARSFGDFDASLGR-KIPGVSAVPTISEFVLQDSDEFLLLACDGLWEVFSNEAAISFIRRDLQRGDASVQAVMDRLVQQAVYRGTTDNVTALLVSFHLRDHF 696
T+F+ V+DGH G+EA+ + ++ + ++ + D + +++R+A+L + S L + G SG+TA+T LL G +VV +AGD RAVLCR G+A+ ++ DH P P E RIE G FV DG + +L V R+ GD+D L + A P I + +L + DEFL+L CDG+W+V S++ A+S +RR L+R D Q D LV++A+ GT DN+T ++V F D+F
Sbjct: 78 TAFYGVFDGHGGQEAAAYLKNNVTRLFFQNEQIYQGDDVEKSLREAFLLAD-SALADDSSVGSSSGTTALTALLLGRLLVVANAGDCRAVLCRKGEAIDMSNDHRPTHPTERRRIEELGGFVDDGYLNGVLSVTRALGDWDMKLALGTASSLIADPEIQQMILTEDDEFLILGCDGIWDVLSSQQAVSRVRRGLRRHDDPEQCAKD-LVREALRLGTYDNLTVIVVCFTSMDYF 309
BLAST of mRNA_S-firma_F_contig10029.91.1 vs. uniprot
Match: A0A6A2XI72_HIBSY (Protein-serine/threonine phosphatase n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2XI72_HIBSY) HSP 1 Score: 165 bits (418), Expect = 6.580e-46 Identity = 91/231 (39.39%), Postives = 141/231 (61.04%), Query Frame = 1
Query: 7 SFFAVYDGHLGKEASEFARDYLHHHLVRSSFFPDSLSEAMRDAYLATERSLL-GVAAERGWESGSTAVTVLLQGDRVVVGHAGDARAVLCRAGQAVPLTKDHSPHSPAEVERIERDGSFVKDGMVYHLLGVARSFGDFDAS----LGRKIPGVSAVPTISEFVLQDSDEFLLLACDGLWEVFSNEAAISFIRRDLQRGDASVQAVMDRLVQQAVYRGTTDNVTALLVSFHL 684
SF+ V+DGH GK+AS+F RD+L +V + FP L +A+ +++ T+ + + E SG+TA+T ++ G ++V +AGD+RAVL R G A+ ++KDH P E RIE G FV DG + LGV R+ GD+ +G +I + A P + L DEFL++ DG+W+VF+ + A+ F RR LQ+ + V+ +V++A+ RG TDN+T +LV+FHL
Sbjct: 103 SFYGVFDGHGGKDASQFVRDHLPRVIVEDADFPLGLEKAVTRSFMETDAAFAKSCSIESAQASGTTALTAMIFGRSLLVANAGDSRAVLSRLGTAIEMSKDHRPCCMKERRRIESLGGFVDDGYLNGQLGVTRALGDWHLEGMKEVGERIGPLIAEPELKMITLTKEDEFLIIGSDGIWDVFTTQNAVDFTRRRLQQHN-DVKLCCKEIVEEALKRGATDNLTVVLVAFHL 332
BLAST of mRNA_S-firma_F_contig10029.91.1 vs. uniprot
Match: A0A6P4LRE9_GOSAR (Protein-serine/threonine phosphatase n=26 Tax=Gossypium TaxID=3633 RepID=A0A6P4LRE9_GOSAR) HSP 1 Score: 165 bits (418), Expect = 1.040e-45 Identity = 90/231 (38.96%), Postives = 141/231 (61.04%), Query Frame = 1
Query: 7 SFFAVYDGHLGKEASEFARDYLHHHLVRSSFFPDSLSEAMRDAYLATERSLL-GVAAERGWESGSTAVTVLLQGDRVVVGHAGDARAVLCRAGQAVPLTKDHSPHSPAEVERIERDGSFVKDGMVYHLLGVARSFGDFDAS----LGRKIPGVSAVPTISEFVLQDSDEFLLLACDGLWEVFSNEAAISFIRRDLQRGDASVQAVMDRLVQQAVYRGTTDNVTALLVSFHL 684
SF+ V+DGH GK+AS+F RD+L +V + FP + +A+ +++ T+ + + E SG+TA+T ++ G ++V +AGD+RAVL R G A+ ++KDH P E RIE G F+ DG + LGV R+ G++ +G +I +SA P + L DEFL++ DG+W+VF+++ A+ F RR LQ + V+ +V +A+ RG TDN+T +LVSFHL
Sbjct: 123 SFYGVFDGHGGKDASQFVRDHLPRVIVEDADFPLDIEKAVTRSFMETDAAFAKSCSLESALTSGTTALTAMIFGRSLLVANAGDSRAVLSRCGTAIEMSKDHRPCCMKERRRIESLGGFIDDGYLNGQLGVTRALGNWHLEGMKEMGERIGPLSAEPELKMITLTKEDEFLIIGSDGIWDVFTSQNAVDFTRRRLQEHN-DVKLCCREMVGEAIKRGATDNLTVVLVSFHL 352
BLAST of mRNA_S-firma_F_contig10029.91.1 vs. uniprot
Match: A0A166HHU2_DAUCS (Protein-serine/threonine phosphatase n=2 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A166HHU2_DAUCS) HSP 1 Score: 163 bits (412), Expect = 1.680e-45 Identity = 90/240 (37.50%), Postives = 140/240 (58.33%), Query Frame = 1
Query: 7 SFFAVYDGHLGKEASEFARDYLHHHLVRSSFFPDS----------LSEAMRDAYLATERSLLGVAAERGWESGSTAVTVLLQGDRVVVGHAGDARAVLCRAGQAVPLTKDHSPHSPAEVERIERDGSFVKDGMVYHLLGVARSFGDFDASLGRKIPG-VSAVPTISEFVLQDSDEFLLLACDGLWEVFSNEAAISFIRRDLQRGDASVQAVMDRLVQQAVYRGTTDNVTALLVSFHLRDH 693
+F+ V+DGH G EA+ + R ++ FP S + ++R A+L + +L + SG+TA+T ++ G R++V +AGD RAVLCR G+A+ +++DH P E +R+E G F+ DG + +L V R+ GD+D L R P + A P + + VL + DEFL++ACDG+W+V S++ AIS +RR L+R D Q D LV +A+ T DN+T ++V F DH
Sbjct: 46 AFYGVFDGHGGPEAAAYVRKNVNKFFFEDVNFPQSSEVDDAFLEAVGSSLRQAFLLADAALADDCSV-STSSGTTALTAIVLGSRLLVANAGDCRAVLCRKGEAIEMSQDHRPSHALERKRVEELGGFIDDGYLNGVLSVTRALGDWDLKLSRGNPSPLIAEPDVKQIVLTEDDEFLIIACDGIWDVLSSQQAISLVRRGLRRHDDPGQCARD-LVMEALRLNTFDNLTVIIVCFTSLDH 283
BLAST of mRNA_S-firma_F_contig10029.91.1 vs. uniprot
Match: A0A067K1U0_JATCU (Protein-serine/threonine phosphatase n=1 Tax=Jatropha curcas TaxID=180498 RepID=A0A067K1U0_JATCU) HSP 1 Score: 164 bits (416), Expect = 2.300e-45 Identity = 88/232 (37.93%), Postives = 142/232 (61.21%), Query Frame = 1
Query: 7 SFFAVYDGHLGKEASEFARDYLHHHLVRSSFFPDSLSEAMRDAYLATERSLLGV-AAERGWESGSTAVTVLLQGDRVVVGHAGDARAVLCRAGQAVPLTKDHSPHSPAEVERIERDGSFVKDGMVYHLLGVARSFGDFDASLGRKIPG-----VSAVPTISEFVLQDSDEFLLLACDGLWEVFSNEAAISFIRRDLQRGDASVQAVMDRLVQQAVYRGTTDNVTALLVSFHL 684
SF+ V+DGH GK A++F RDYL +V + FP L + + +++ T+ +L + E SG+TA+T ++ G ++V +AGD RAVL R G A+ +++DH P E R+E G +++DG + LGV R+ GD+ G K+ G +SA P + L DEFL++ DG+W+VF+++ ++SF RR LQ + V+ +V++A+ RG TDN+T +++SFHL
Sbjct: 128 SFYGVFDGHGGKNAAQFVRDYLPKVIVEDADFPLELEKVVTRSFIETDAALAETYSLESALSSGTTALTAMIFGRSLLVANAGDCRAVLSRHGAAIEMSRDHRPCCVKERTRVESLGGYIEDGYLNGQLGVTRALGDWHLE-GMKVKGESGGLLSAEPELKSITLTKEDEFLIIGSDGIWDVFTSQNSVSFARRKLQEHN-DVKLCCKEMVEEAIRRGATDNLTVVMISFHL 357 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10029.91.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10029.91.1 >prot_S-firma_F_contig10029.91.1 ID=prot_S-firma_F_contig10029.91.1|Name=mRNA_S-firma_F_contig10029.91.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=233bp RTSFFAVYDGHLGKEASEFARDYLHHHLVRSSFFPDSLSEAMRDAYLATEback to top mRNA from alignment at S-firma_F_contig10029:2194..2964+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10029.91.1 ID=mRNA_S-firma_F_contig10029.91.1|Name=mRNA_S-firma_F_contig10029.91.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=771bp|location=Sequence derived from alignment at S-firma_F_contig10029:2194..2964+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10029:2194..2964+ >mRNA_S-firma_F_contig10029.91.1 ID=mRNA_S-firma_F_contig10029.91.1|Name=mRNA_S-firma_F_contig10029.91.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1398bp|location=Sequence derived from alignment at S-firma_F_contig10029:2194..2964+ (Sphaerotrichia firma ET2_F female)back to top |