mRNA_S-firma_F_contig1001.73.1 (mRNA) Sphaerotrichia firma ET2_F female
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_S-firma_F_contig1001.73.1 vs. uniprot
Match: A0A1U8B5U0_NELNU (Histone acetyltransferase n=2 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U8B5U0_NELNU) HSP 1 Score: 93.2 bits (230), Expect = 6.300e-21 Identity = 42/89 (47.19%), Postives = 55/89 (61.80%), Query Frame = 3 Query: 27 GEVFDNRETFLAVCRHNQYQFDTLRRAMHSTAMVLYHLHNPETPWCLPKCFFCGEGVFADKRSSCRSCVD*HVCKGCILKERT-HDHEL 290 E+F+NR+TFL+ C+ N YQ+DTLRRA HST M+LYH HNP P + C C + + A + C C D VC C KE H+H+L Sbjct: 35 NELFENRQTFLSFCQGNHYQYDTLRRAKHSTMMILYHFHNPAVPAVIATCSICYKDIEAGQGWHCEVCSDYDVCAVCYQKEVVDHNHKL 123
BLAST of mRNA_S-firma_F_contig1001.73.1 vs. uniprot
Match: A0A7I8KEU3_SPIIN (Histone acetyltransferase n=2 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8KEU3_SPIIN) HSP 1 Score: 95.5 bits (236), Expect = 1.190e-20 Identity = 43/93 (46.24%), Postives = 55/93 (59.14%), Query Frame = 3 Query: 27 GEVFDNRETFLAVCRHNQYQFDTLRRAMHSTAMVLYHLHNPETPWCLPKCFFCGEGVFADKRSSCRSCVD*HVCKGCILKERTHDHELEPITQ 305 E FD+R FL +C+ N YQ+DTLRRA HST M+LYHLHNP P + CF C E V A + C +C D +C C +E + H E + Q Sbjct: 1228 SEFFDSRLAFLNLCQGNHYQYDTLRRAKHSTMMILYHLHNPTVPAFVSSCFHCHEDVEAGQGWHCETCPDYDLCNSCYQREGSTGHAHELVRQ 1320
BLAST of mRNA_S-firma_F_contig1001.73.1 vs. uniprot
Match: S8C569_9LAMI (Histone acetyltransferase (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8C569_9LAMI) HSP 1 Score: 91.3 bits (225), Expect = 1.650e-20 Identity = 40/88 (45.45%), Postives = 54/88 (61.36%), Query Frame = 3 Query: 33 VFDNRETFLAVCRHNQYQFDTLRRAMHSTAMVLYHLHNPETPWCLPKCFFCGEGVFADKRSSCRSCVD*HVCKGCILKE--RTHDHEL 290 +FD R+ FL++C+ N YQ+DTLRRA HS+ MVLYHLHNP P + +C C + A + C +C D +C C K+ R H H L Sbjct: 1 IFDTRQAFLSLCQGNHYQYDTLRRAKHSSMMVLYHLHNPSAPAFVAQCAVCHRDIEAGQGWHCGTCPDYDMCNACYQKDEGRNHPHSL 88
BLAST of mRNA_S-firma_F_contig1001.73.1 vs. uniprot
Match: A0A7S2RCX7_9STRA (Histone acetyltransferase n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RCX7_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 2.240e-20 Identity = 42/97 (43.30%), Postives = 59/97 (60.82%), Query Frame = 3 Query: 15 PMR*GEVFDNRETFLAVCRHNQYQFDTLRRAMHSTAMVLYHLHNPETPWCLPKCFFCGEGVFADKRSSCRSCVD*HVCKGCILKERTHDHELEPITQ 305 P+ + FD R+ FL++C+ N+YQ+D LRRA HS+ MVLYHLHNP+ P + C C + + D C C D VC C K++ H H+LE + Q Sbjct: 1793 PLMDNQFFDTRQQFLSLCQGNKYQYDQLRRAKHSSMMVLYHLHNPDEPGFVHSCNLCQQEIKEDSWWKCPVCEDFDVCNSCAAKKQ-HKHKLEQVHQ 1888
BLAST of mRNA_S-firma_F_contig1001.73.1 vs. uniprot
Match: A0A453SNE6_AEGTS (Histone acetyltransferase n=3 Tax=Triticinae TaxID=1648030 RepID=A0A453SNE6_AEGTS) HSP 1 Score: 92.0 bits (227), Expect = 2.710e-20 Identity = 42/89 (47.19%), Postives = 53/89 (59.55%), Query Frame = 3 Query: 30 EVFDNRETFLAVCRHNQYQFDTLRRAMHSTAMVLYHLHNPETPWCLPKCFFCGEGVFADKRSSCRSCVD*HVCKGCILKE--RTHDHEL 290 E FD R+ FL++C+ N YQ+DTLRRA HS+ MVLYHLHNP P + C C + A + C C D VC GC K+ H H+L Sbjct: 64 EFFDTRQAFLSLCQGNHYQYDTLRRAKHSSMMVLYHLHNPTAPAFVTTCNICNNDIEAGQGWRCEECPDFDVCAGCYNKDGGANHRHKL 152
BLAST of mRNA_S-firma_F_contig1001.73.1 vs. uniprot
Match: D8T4N9_SELML (Histone acetyltransferase n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8T4N9_SELML) HSP 1 Score: 93.2 bits (230), Expect = 7.570e-20 Identity = 42/90 (46.67%), Postives = 52/90 (57.78%), Query Frame = 3 Query: 27 GEVFDNRETFLAVCRHNQYQFDTLRRAMHSTAMVLYHLHNPETPWCLPKCFFCGEGVFADKRSSCRSCVD*HVCKGCILKERT--HDHEL 290 E FD R FL +C+ N YQ+DTLRRA HS+ MVLYHLHNP P + C C + + C +C + VC GC KE T H H+L Sbjct: 793 SEFFDTRHAFLTLCQGNHYQYDTLRRAKHSSMMVLYHLHNPMAPAFVVTCCICTHDIEPGQGWKCETCTEYDVCNGCYYKEETRKHPHKL 882
BLAST of mRNA_S-firma_F_contig1001.73.1 vs. uniprot
Match: D8R0K0_SELML (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 n=6 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8R0K0_SELML) HSP 1 Score: 93.2 bits (230), Expect = 7.700e-20 Identity = 42/91 (46.15%), Postives = 54/91 (59.34%), Query Frame = 3 Query: 27 GEVFDNRETFLAVCRHNQYQFDTLRRAMHSTAMVLYHLHNPETPWCLPKCFFCGEGVFADKRSSCRSCVD*HVCKGCILKERT-HDHELEP 296 E FD R+ FL++C+ N YQ DTLRRA HS+ MVLYHLHNP P + C C + + K C +C D +C C KE H H+L+P Sbjct: 1088 SEFFDTRQAFLSLCQGNHYQHDTLRRAKHSSMMVLYHLHNPTAPAFVTSCNICNQDIETGKGWRCDTCADFDLCAACYHKELPKHPHKLKP 1178
BLAST of mRNA_S-firma_F_contig1001.73.1 vs. uniprot
Match: A0A830HS00_9CHLO (Histone acetyltransferase n=3 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HS00_9CHLO) HSP 1 Score: 93.2 bits (230), Expect = 7.710e-20 Identity = 45/96 (46.88%), Postives = 56/96 (58.33%), Query Frame = 3 Query: 15 PMR*GEVFDNRETFLAVCRHNQYQFDTLRRAMHSTAMVLYHLHNPETPWCLPKCFFCGEGVFADKRS-SCRSCVD*HVCKGCILKER-THDHELEP 296 P E FD R+ FL++C+ N YQFDTLRRA HS+ MVLYH+HNP+ P C CG + AD R+ C C D VC+ C H+H L P Sbjct: 1272 PGEPSEFFDTRQNFLSLCQGNHYQFDTLRRAKHSSMMVLYHMHNPQAPGFAATCNVCGIEMQADARAYRCDECSDYDVCEACRRSPNFKHEHPLRP 1367
BLAST of mRNA_S-firma_F_contig1001.73.1 vs. uniprot
Match: D8SJY6_SELML (Histone acetyltransferase n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SJY6_SELML) HSP 1 Score: 93.2 bits (230), Expect = 7.720e-20 Identity = 42/90 (46.67%), Postives = 52/90 (57.78%), Query Frame = 3 Query: 27 GEVFDNRETFLAVCRHNQYQFDTLRRAMHSTAMVLYHLHNPETPWCLPKCFFCGEGVFADKRSSCRSCVD*HVCKGCILKERT--HDHEL 290 E FD R FL +C+ N YQ+DTLRRA HS+ MVLYHLHNP P + C C + + C +C + VC GC KE T H H+L Sbjct: 1346 SEFFDTRHAFLTLCQGNHYQYDTLRRAKHSSMMVLYHLHNPMAPAFVVTCCICTHDIEPGQGWKCETCTEYDVCNGCYYKEETRKHPHKL 1435
BLAST of mRNA_S-firma_F_contig1001.73.1 vs. uniprot
Match: A0A022RQU8_ERYGU (Histone acetyltransferase n=4 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022RQU8_ERYGU) HSP 1 Score: 93.2 bits (230), Expect = 7.730e-20 Identity = 42/90 (46.67%), Postives = 54/90 (60.00%), Query Frame = 3 Query: 27 GEVFDNRETFLAVCRHNQYQFDTLRRAMHSTAMVLYHLHNPETPWCLPKCFFCGEGVFADKRSSCRSCVD*HVCKGCILKE--RTHDHEL 290 E FD R+ FL++C+ N YQ+DTLRRA HS+ MVLYHLHNP P + C C + A + C +C D VC C K+ R H H+L Sbjct: 1395 SEFFDTRQAFLSLCQGNHYQYDTLRRAKHSSMMVLYHLHNPTAPAFVTTCIICHLDIEAGQGWRCETCPDYEVCNACYQKDGGRDHPHKL 1484 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1001.73.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig1001.73.1 >prot_S-firma_F_contig1001.73.1 ID=prot_S-firma_F_contig1001.73.1|Name=mRNA_S-firma_F_contig1001.73.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=105bp MCPPSRCVRVKCSTTGRPSSPYADTTSTSSTRCEGPCIPRQWYCITCTTQback to top mRNA from alignment at S-firma_F_contig1001:25423..26528- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig1001.73.1 ID=mRNA_S-firma_F_contig1001.73.1|Name=mRNA_S-firma_F_contig1001.73.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=1106bp|location=Sequence derived from alignment at S-firma_F_contig1001:25423..26528- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig1001:25423..26528- >mRNA_S-firma_F_contig1001.73.1 ID=mRNA_S-firma_F_contig1001.73.1|Name=mRNA_S-firma_F_contig1001.73.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=630bp|location=Sequence derived from alignment at S-firma_F_contig1001:25423..26528- (Sphaerotrichia firma ET2_F female)back to top |