mRNA_S-firma_F_contig10.48.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10.48.1 vs. uniprot
Match: D8LB76_ECTSI (Cyclic pyranopterin monophosphate synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB76_ECTSI) HSP 1 Score: 300 bits (768), Expect = 1.160e-98 Identity = 148/163 (90.80%), Postives = 160/163 (98.16%), Query Frame = 3
Query: 228 GHELSTHVSSDGLTPRMVDVGGKATTRRTATARSRVRLPPEVSSKMETVGGEVVGKKGPVFTTAIIAGVQAAKRTSDLVPFCHPLPIEDCRVELNLTEGGKVIEVDCTVRVTHKTGVEMEAMMGASVAALTVYDMLKGLSHDIVIESTALVSKTGGKRDFSRT 716
GHELSTHVSSDG+TPRMVDVG KATTRRTATARSR+RLPP+V+SKMETVGGEVVGKKGPVFTTAI+AGVQAAKRTS+L+PFCHPLPIEDCRVEL+L +GG++IEVDCTVRVTHKTGVEMEAMMGASVAALTVYDMLKGLSHDIV+E TALVSKTGGKRDFSRT
Sbjct: 64 GHELSTHVSSDGVTPRMVDVGDKATTRRTATARSRIRLPPDVTSKMETVGGEVVGKKGPVFTTAIVAGVQAAKRTSELIPFCHPLPIEDCRVELSLKQGGEIIEVDCTVRVTHKTGVEMEAMMGASVAALTVYDMLKGLSHDIVVEDTALVSKTGGKRDFSRT 226
BLAST of mRNA_S-firma_F_contig10.48.1 vs. uniprot
Match: A0A835ZDT1_9STRA (Cyclic pyranopterin monophosphate synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDT1_9STRA) HSP 1 Score: 260 bits (664), Expect = 4.810e-83 Identity = 129/169 (76.33%), Postives = 146/169 (86.39%), Query Frame = 3
Query: 216 ADQDGHELSTHVSSDGLTPRMVDVGGKATTRRTATARSRVRLPPEVSSKMETVGGEVVGKKGPVFTTAIIAGVQAAKRTSDLVPFCHPLPIEDCRVELNLTEGGKVIEVDCTVRVTHKTGVEMEAMMGASVAALTVYDMLKGLSHDIVIESTALVSKTGGKRDFSRTGE 722
A D H+LSTHVSSDG TP MVDVG K +RR+ATAR+RVRLPP+V +KM VGGEVVGKKGP+FTTAIIAGV AK TS L+PFCHPLPIEDC+V++ LTEG VI++DCTVRVTHKTGVEMEAM GASVAALTVYDMLKGLSHDIVIEST L++K GGKR +SR G+
Sbjct: 51 AGSDTHDLSTHVSSDGTTPMMVDVGHKTASRRSATARTRVRLPPDVINKMNVVGGEVVGKKGPIFTTAIIAGVLGAKNTSSLIPFCHPLPIEDCKVDMELTEGNFVIQIDCTVRVTHKTGVEMEAMTGASVAALTVYDMLKGLSHDIVIESTQLLAKEGGKRPYSRAGQ 219
BLAST of mRNA_S-firma_F_contig10.48.1 vs. uniprot
Match: A0A662YBD8_9STRA (Cyclic pyranopterin monophosphate synthase n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YBD8_9STRA) HSP 1 Score: 205 bits (521), Expect = 8.830e-62 Identity = 105/161 (65.22%), Postives = 126/161 (78.26%), Query Frame = 3
Query: 243 THVSSDGLTPRMVDVGGKATTRRTATARSRVRLPPEVSSKMETVGGE-----VVGKKGPVFTTAIIAGVQAAKRTSDLVPFCHPLPIEDCRVELNLTEGGKVIEVDCTVRVTHKTGVEMEAMMGASVAALTVYDMLKGLSHDIVIESTALVSKTGGKRDFS 710
+H+SSDG +P+MVDVG K TRR+ATARS +RLPP V +++ +G E + G KGP+ TTAIIAGV AK+TS L+PFCHPLP+EDC+V L + G IE++C VRVTHKTGVEMEA+ GASVAAL VYDM K LSH+IVIEST LV KTGGKRDFS
Sbjct: 44 SHISSDGSSPQMVDVGSKRVTRRSATARSTIRLPPAVLDELKRIGREQGGELLTGPKGPIATTAIIAGVLGAKQTSSLIPFCHPLPLEDCQVRLQVV-GRDTIEIECQVRVTHKTGVEMEALTGASVAALCVYDMCKALSHEIVIESTRLVEKTGGKRDFS 203
BLAST of mRNA_S-firma_F_contig10.48.1 vs. uniprot
Match: W2PYA6_PHYPN (Cyclic pyranopterin monophosphate synthase n=12 Tax=Phytophthora TaxID=4783 RepID=W2PYA6_PHYPN) HSP 1 Score: 203 bits (516), Expect = 2.540e-61 Identity = 101/157 (64.33%), Postives = 127/157 (80.89%), Query Frame = 3
Query: 243 THVSSDGLTPRMVDVGGKATTRRTATARSRVRLPPEVSSKMETVGGE-VVGKKGPVFTTAIIAGVQAAKRTSDLVPFCHPLPIEDCRVELNLTEGGKVIEVDCTVRVTHKTGVEMEAMMGASVAALTVYDMLKGLSHDIVIESTALVSKTGGKRDFS 710
THVS DG +P MVDVG K TRR+ATARS +RLPP V ++++ +G + ++G KGP+ +TA+IAGV AK+TS L+PFCHPLP++DC+V L +T G I+V+C V+VTHKTGVEMEA+ GAS+AAL VYDM K LSH+IVIEST LV KTGGKRDFS
Sbjct: 26 THVSRDGTSPHMVDVGSKKVTRRSATARSTIRLPPSVLAELQKLGDDQLMGPKGPIASTAVIAGVLGAKQTSSLIPFCHPLPLDDCQVRLKVT-GPDAIDVECQVKVTHKTGVEMEALTGASIAALCVYDMCKALSHEIVIESTRLVEKTGGKRDFS 181
BLAST of mRNA_S-firma_F_contig10.48.1 vs. uniprot
Match: A0A3F2RJA8_9STRA (Cyclic pyranopterin monophosphate synthase n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RJA8_9STRA) HSP 1 Score: 202 bits (515), Expect = 5.460e-61 Identity = 106/162 (65.43%), Postives = 126/162 (77.78%), Query Frame = 3
Query: 243 THVSSDGLTPRMVDVGGKATTRRTATARSRVRLPPEVSSKM-----ETVGGE-VVGKKGPVFTTAIIAGVQAAKRTSDLVPFCHPLPIEDCRVELNLTEGGKVIEVDCTVRVTHKTGVEMEAMMGASVAALTVYDMLKGLSHDIVIESTALVSKTGGKRDFS 710
THVS+DG P MVDVG K TRR+ATARS +RLPP V +++ ET GGE ++G KGP+ TTAIIAGV AK+TS L+PFCHPLP+EDC+V L + IEV+C VRVTHKTGVEMEA+ GASVAAL VYDM K LSH+I+IE+T L+ KTGGKRDFS
Sbjct: 35 THVSADGSAPHMVDVGHKGVTRRSATARSTIRLPPSVLAELKRIGEETGGGEALIGPKGPIATTAIIAGVLGAKQTSSLIPFCHPLPLEDCQVRLEVV-APDAIEVECQVRVTHKTGVEMEALTGASVAALCVYDMCKALSHEIIIENTRLIEKTGGKRDFS 195
BLAST of mRNA_S-firma_F_contig10.48.1 vs. uniprot
Match: A0A6A3FJV5_9STRA (Cyclic pyranopterin monophosphate synthase n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3FJV5_9STRA) HSP 1 Score: 199 bits (506), Expect = 8.940e-60 Identity = 105/159 (66.04%), Postives = 127/159 (79.87%), Query Frame = 3
Query: 243 THVSSDGLTPRMVDVGGKATTRRTATARSRVRLPPEVSSKMETVGG---EVVGKKGPVFTTAIIAGVQAAKRTSDLVPFCHPLPIEDCRVELNLTEGGKVIEVDCTVRVTHKTGVEMEAMMGASVAALTVYDMLKGLSHDIVIESTALVSKTGGKRDFS 710
THVS DG +P+MVDVG K TRR+ATARSR+RLPP V ++++ + G E++G KGP+ +TA+IAGV AK+TS L+PFCHPLP+EDC+V L + G I+V+C VRVTHKTGVEMEA+ GASVAAL VYDM K LSHDIVIEST LV KTGGKRD S
Sbjct: 28 THVSGDG-SPQMVDVGRKQVTRRSATARSRIRLPPAVLTELQRLQGDGHELIGPKGPIASTAVIAGVLGAKQTSALLPFCHPLPLEDCQVRLEVV-GPDAIDVECRVRVTHKTGVEMEALTGASVAALCVYDMCKALSHDIVIESTRLVEKTGGKRDVS 184
BLAST of mRNA_S-firma_F_contig10.48.1 vs. uniprot
Match: A0A5D6XL32_9STRA (Cyclic pyranopterin monophosphate synthase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XL32_9STRA) HSP 1 Score: 199 bits (507), Expect = 1.240e-59 Identity = 102/169 (60.36%), Postives = 128/169 (75.74%), Query Frame = 3
Query: 219 DQDGHELSTHVSSDGLTPRMVDVGGKATTRRTATARSRVRLPPEVSSKMETVGGE----VVGKKGPVFTTAIIAGVQAAKRTSDLVPFCHPLPIEDCRVELNLTEGGKVIEVDCTVRVTHKTGVEMEAMMGASVAALTVYDMLKGLSHDIVIESTALVSKTGGKRDFSR 713
D DG +H++ DG TP+MVDVG K+ TRR+ATARS +RLPP V +++ +GG + G KGP+ TAI+AGV AK+TS L+PFCHPLP++DC+V + G IE++CTVRVTH+TGVEMEA+ GASVAAL VYDM K LSHDIVIE T LV+K+GGKRDF R
Sbjct: 40 DADGASKFSHLTPDGATPKMVDVGAKSVTRRSATARSTLRLPPAVLAELRRLGGGDGELLAGPKGPIGATAIVAGVLGAKQTSALLPFCHPLPLDDCQVAVRAV-GADAIEIECTVRVTHRTGVEMEALTGASVAALCVYDMCKALSHDIVIERTWLVAKSGGKRDFQR 207
BLAST of mRNA_S-firma_F_contig10.48.1 vs. uniprot
Match: H3G7B1_PHYRM (Cyclic pyranopterin monophosphate synthase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G7B1_PHYRM) HSP 1 Score: 197 bits (501), Expect = 1.860e-59 Identity = 104/156 (66.67%), Postives = 124/156 (79.49%), Query Frame = 3
Query: 243 THVSSDGLTPRMVDVGGKATTRRTATARSRVRLPPEVSSKMETVGGE-VVGKKGPVFTTAIIAGVQAAKRTSDLVPFCHPLPIEDCRVELNLTEGGKVIEVDCTVRVTHKTGVEMEAMMGASVAALTVYDMLKGLSHDIVIESTALVSKTGGKRDF 707
THV SDG +PRMVDVG K TRR+ATARS +RLPP V +++ VGGE +VG KGP+ TTAIIAGV AK TS L+PFCHPLP+E+C+V+L++ I V+C V+VTHKTGVEMEA+ GASVAAL VYDM K LSH+IVIE T LV K+GGKRDF
Sbjct: 3 THVGSDG-SPRMVDVGNKQVTRRSATARSTIRLPPAVLLELQRVGGEQLVGPKGPISTTAIIAGVMGAKSTSSLLPFCHPLPLENCQVQLHVV-APDAIHVECKVQVTHKTGVEMEALTGASVAALCVYDMCKALSHEIVIEDTRLVDKSGGKRDF 156
BLAST of mRNA_S-firma_F_contig10.48.1 vs. uniprot
Match: K3WVA7_GLOUD (Cyclic pyranopterin monophosphate synthase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WVA7_GLOUD) HSP 1 Score: 196 bits (497), Expect = 1.060e-58 Identity = 101/162 (62.35%), Postives = 125/162 (77.16%), Query Frame = 3
Query: 249 VSSDGLTPRMVDVGGKATTRRTATARSRVRLPPEVSSKMETVGGE--------VVGKKGPVFTTAIIAGVQAAKRTSDLVPFCHPLPIEDCRVELNLTEGGKVIEVDCTVRVTHKTGVEMEAMMGASVAALTVYDMLKGLSHDIVIESTALVSKTGGKRDFS 710
+S DG P+MVDVG K TRRTATA++ +RLPP V S++ +GG +VG KGP+ TTAIIAGV AK+TS L+PFCHPLPIEDC++++++ G IE++CTVRVTHKTGVEMEA+ GASVAAL VYDM K LSHDIVIE+T L+ KTGGK DF+
Sbjct: 1 MSPDGKAPQMVDVGHKHVTRRTATAKTTIRLPPIVLSELRRLGGSGDSSPSELLVGPKGPIGTTAIIAGVLGAKQTSSLIPFCHPLPIEDCQIQIHVA-GEDRIEIECTVRVTHKTGVEMEALTGASVAALCVYDMCKALSHDIVIENTRLIKKTGGKSDFA 161
BLAST of mRNA_S-firma_F_contig10.48.1 vs. uniprot
Match: A0A662YIF6_9STRA (Cyclic pyranopterin monophosphate synthase n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YIF6_9STRA) HSP 1 Score: 191 bits (485), Expect = 4.030e-57 Identity = 99/150 (66.00%), Postives = 116/150 (77.33%), Query Frame = 3
Query: 276 MVDVGGKATTRRTATARSRVRLPPEVSSKMETVGGE-----VVGKKGPVFTTAIIAGVQAAKRTSDLVPFCHPLPIEDCRVELNLTEGGKVIEVDCTVRVTHKTGVEMEAMMGASVAALTVYDMLKGLSHDIVIESTALVSKTGGKRDFS 710
MVDVG K TRR+ATARS +RLPP V +++ +G E + G KGP+ TTAIIAGV AK+TS L+PFCHPLP+EDC+V L + G IE++C VRVTHKTGVEMEA+ GASVAAL VYDM K LSH+IVIEST LV KTGGKRDFS
Sbjct: 1 MVDVGSKRVTRRSATARSTIRLPPAVLDELKRIGKEQGGELLTGPKGPIATTAIIAGVLGAKQTSSLIPFCHPLPLEDCQVRLQVV-GRDTIEIECQVRVTHKTGVEMEALTGASVAALCVYDMCKALSHEIVIESTRLVEKTGGKRDFS 149 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10.48.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10.48.1 >prot_S-firma_F_contig10.48.1 ID=prot_S-firma_F_contig10.48.1|Name=mRNA_S-firma_F_contig10.48.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=235bp MRVVALRGAALRVVETSCFCLLGPSAQATRKINCSGARQPGAGAAASGGRback to top mRNA from alignment at S-firma_F_contig10:31602..33455- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10.48.1 ID=mRNA_S-firma_F_contig10.48.1|Name=mRNA_S-firma_F_contig10.48.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=1854bp|location=Sequence derived from alignment at S-firma_F_contig10:31602..33455- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10:31602..33455- >mRNA_S-firma_F_contig10.48.1 ID=mRNA_S-firma_F_contig10.48.1|Name=mRNA_S-firma_F_contig10.48.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1410bp|location=Sequence derived from alignment at S-firma_F_contig10:31602..33455- (Sphaerotrichia firma ET2_F female)back to top |