mRNA_S-firma_F_contig10.44.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig10.44.1
Unique NamemRNA_S-firma_F_contig10.44.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
BLAST of mRNA_S-firma_F_contig10.44.1 vs. uniprot
Match: A0A6H5K9S3_9PHAE (Methyltransf_25 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K9S3_9PHAE)

HSP 1 Score: 730 bits (1884), Expect = 1.090e-256
Identity = 363/391 (92.84%), Postives = 374/391 (95.65%), Query Frame = 3
Query:   78 PPPPAGEVMEP---VESVDPKLTVMGGSDSQKASDYANYFCSYASLYHQKQMLTDHRRMQAYYSAITDNAELFAGKRVLDVGTGSGILALWAAKAGASK---VYAVEFTDMANHARRLVAKNGMEDVVEVIQCSVEDLKLDAKVDIIISEWMGYFLLRESMLDSLVRARDRWLIPGGLMFPSRCTMMWGLVSDEQDRLSKQQEYIRTMQDWYSFKAETKEFYGVDMTVLEAVYEEEQRGYYILSSFWAELDRDQVLGEPAVVRTFDMHTCTLEDVQGVDETNVSITVEDDARVSGFAGWFTADFHGTEANPCPCPVTLSTGPENGYTHWGQQVFHLQVPHDVVGGGKVEGTIAVKRQKENVRLYDVYIKHKNVLPTGEDKSPLVSVKYAMP 1232
            PP P  E M+    VESVDPKLTVMGG   ++A+DYANYFCSYASLYHQKQMLTDHRRMQAYYSAITDNAELFAGKRVLDVGTGSGILALWAAKAGASK   VYAVEFTDMANHARRLVAKNGME VVEVIQCSVEDLKLDAKVDIIISEWMGYFLLRESMLDSLVRARDRWL+PGGLMFPSRCTMMWGLV+DEQDRLSKQQEYIRTMQDWYSFK ETKEFYGVDMTVLEAVYEEEQRGYYILSSFWAELD+DQVLGEP VV+TFDMHTCTLEDVQGVDETNVSI++E+DARVSGFAGWFTADFHGTEANPCPCPVTLSTGPENGYTHWGQQVFHLQVPHDVVGGGKVEGTIAVKRQKENVRLYDVYIKHKNVLPTGEDKSPLVSVKYAMP
Sbjct:    5 PPTPPAEEMDSSIGVESVDPKLTVMGGGPKEQAADYANYFCSYASLYHQKQMLTDHRRMQAYYSAITDNAELFAGKRVLDVGTGSGILALWAAKAGASKANHVYAVEFTDMANHARRLVAKNGMEGVVEVIQCSVEDLKLDAKVDIIISEWMGYFLLRESMLDSLVRARDRWLVPGGLMFPSRCTMMWGLVNDEQDRLSKQQEYIRTMQDWYSFKGETKEFYGVDMTVLEAVYEEEQRGYYILSSFWAELDKDQVLGEPVVVQTFDMHTCTLEDVQGVDETNVSISLEEDARVSGFAGWFTADFHGTEANPCPCPVTLSTGPENGYTHWGQQVFHLQVPHDVVGGGKVEGTIAVKRQKENVRLYDVYIKHKNVLPTGEDKSPLVSVKYAMP 395          
BLAST of mRNA_S-firma_F_contig10.44.1 vs. uniprot
Match: A0A835YPE5_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPE5_9STRA)

HSP 1 Score: 525 bits (1353), Expect = 5.200e-177
Identity = 257/365 (70.41%), Postives = 297/365 (81.37%), Query Frame = 3
Query:  141 MGGSDSQKASDYANYFCSYASLYHQKQMLTDHRRMQAYYSAITDNAELFAGKRVLDVGTGSGILALWAAKAGASKVYAVEFTDMANHARRLVAKNGMEDVVEVIQCSVEDLKLDAKVDIIISEWMGYFLLRESMLDSLVRARDRWLIPGGLMFPSRCTMMWGLVSDEQDRLSKQQEYIRTMQDWYSFKAETKEFYGVDMTVLEAVYEEEQRGYYILSSFWAELDRDQVLGEPAVVRTFDMHTCTLEDVQGVDETNVSITVEDDARVSGFAGWFTADFHGTEANPCPCPVTLSTGPENGYTHWGQQVFHLQVPHDVVGGGKVEGTIAVKRQKENVRLYDVYIKHKNVLPTGEDK-SPLVSVKYAMP 1232
            M G + +KA+D+ANYFCSYASLYHQKQMLTDHRRMQAY+ AI  N  LFAGKRVLDVGTGSGILALW AKAGA+KV+AVE+TDMA HAR+L+  NG  D+VEVIQ SVE L+LD  VDIIISEWMGYFLLRESMLDS+VRARDRWL PGGLMFPS  TM WGLVSDE+DRL+K  EY+++ Q+W+ FK E +++Y  DM VLE VYEEEQ+GYYILSSFWAEL  DQ +G+ A+++ FDMHTCTLEDVQGV+ET   I VE D RVSGFAGWFTADF GTEANP P PV LST P+NGYTHWGQQVF+L+VPH V  GG VEGT+A+ RQKEN+RLYDV +KH+    + E    P+    Y MP
Sbjct:    1 MKGGEEEKAADFANYFCSYASLYHQKQMLTDHRRMQAYHGAIMQNRGLFAGKRVLDVGTGSGILALWCAKAGAAKVFAVEYTDMAKHARKLIEANGASDIVEVIQSSVEALQLDGPVDIIISEWMGYFLLRESMLDSVVRARDRWLAPGGLMFPSHATMYWGLVSDEEDRLAKAAEYLQSTQEWHRFKREMRQYYDCDMNVLEGVYEEEQKGYYILSSFWAELQPDQCVGQGAMIKHFDMHTCTLEDVQGVEETPFRINVEHDCRVSGFAGWFTADFRGTEANPLPVPVLLSTAPDNGYTHWGQQVFYLEVPHWVPRGGAVEGTLALTRQKENIRLYDVGVKHRRHGNSQEPNLGPMQEATYTMP 365          
BLAST of mRNA_S-firma_F_contig10.44.1 vs. uniprot
Match: A0A7S2V4Q5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4Q5_9STRA)

HSP 1 Score: 426 bits (1095), Expect = 9.300e-138
Identity = 221/372 (59.41%), Postives = 267/372 (71.77%), Query Frame = 3
Query:  135 TVMGGSDSQKASDYANYFCSYASLYHQKQMLTDHRRMQAYYSAITDNAELFAGKRVLDVGTGSGILALWAAKAGASKVYAVEFTDMANHARRLVAKNGMEDVVEVIQCSVEDLKLDAKVDIIISEWMGYFLLRESMLDSLVRARDRWLIPGGLMFPSRCTMMWGLVSDEQDRLSKQQEYIRTMQDWYSFKAETKEFYGVDMTVLEAVYEEEQRGYYILSSFWAELDRDQVLGEPAVVRTFDMHTCTLEDVQGVDETNVSITV-EDDARVSGFAGWFTADFHGTEANPCPCPVTLSTGPENGYTHWGQQVFHLQVPHDVVGGGKVEGTIAVKRQKENVRLYDVYIKHK----NVLP-TGEDKSPLVSVKYAMP 1232
            T++ G+ + KA+DYANYFCSYA LYHQKQMLTDH+RM+AYYSA+  N E+F    VLDVGTGSG+LA WAA AGA KVYAVEFTDMA HARRLV  NG  D VEVI+ SVE+L L  KVDIIISEWMGYFLLRESM+DSL++ARDR+L P GL+FPS  TM W  +  E++RL KQQEYI+++Q+W++FKAETKE YG+ M  LEA YE+EQR YYI ++ W+EL  DQV+  P  ++  D+HTCT  +  GV E            RVSGFAGWFT DF G         V LSTGPE GYTHWGQQVF+L  P D+  G K+ GT  ++RQKEN+RLYD+Y+ HK      LP  GE +   V  KY +P
Sbjct:   36 TLIVGNSAAKAADYANYFCSYAFLYHQKQMLTDHQRMRAYYSAVMQNKEVFQNAVVLDVGTGSGVLAAWAAMAGAKKVYAVEFTDMATHARRLVEANGQADKVEVIKGSVEELDLAEKVDIIISEWMGYFLLRESMVDSLIKARDRFLKPDGLLFPSHATMYWAPICFEEERLGKQQEYIQSLQEWHNFKAETKERYGITMATLEADYEQEQRHYYINTASWSELHPDQVVCPPQAIKHLDLHTCTQPEAAGVAELPFCFPCGTQPTRVSGFAGWFTTDFKGRVGRSLGSEVVLSTGPEAGYTHWGQQVFYLAQPLDLQPGDKILGTFRMERQKENIRLYDLYLTHKVKRAAPLPGNGEAEDQPVVTKYELP 407          
BLAST of mRNA_S-firma_F_contig10.44.1 vs. uniprot
Match: A0A482SBI8_9ARCH (Class I SAM-dependent methyltransferase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SBI8_9ARCH)

HSP 1 Score: 388 bits (997), Expect = 1.020e-123
Identity = 191/342 (55.85%), Postives = 247/342 (72.22%), Query Frame = 3
Query:  138 VMGGSDSQKASDYANYFCSYASLYHQKQMLTDHRRMQAYYSAITDNAELFAGKRVLDVGTGSGILALWAAKAGASKVYAVEFTDMANHARRLVAKNGMEDVVEVIQCSVEDLKLDAKVDIIISEWMGYFLLRESMLDSLVRARDRWLIPGGLMFPSRCTMMWGLVSDEQDRLSKQQEYIRTMQDWYSFKAETKEFYGVDMTVLEAVYEEEQRGYYILSSFWAELDRDQVLGEPAVVRTFDMHTCTLEDVQGVDETNVSITVEDDARVSGFAGWFTADFHGTEANPCPCPVTLSTGPENGYTHWGQQVFHLQVPHDVVGGGKVEGTIAVKRQKENVRLYDVYI 1163
            +M G+++ KA+DYANYFCSYA LYHQKQML DH RM+AY+S+I  N + F GK VLDVGTGSGIL++WAA+AGA+KVYA E+TDMANHAR+LV  NG+  +VEVIQ SVEDL+L  +VDIIISEWMGY LLRESMLDS++RAR+RWL P G MFPS  TM    +S E DR  K  E+  +M+DW  F  E K +Y VD+  L   + +EQ  YY+ S  W EL  + V+G+P +++  D++TCTL+D +GVD     I +  +A VSGFAGWFT DF+G+  +P    V LSTGPE G THWGQQVF+L+   D   G  + G +A+ RQ++N RLY++ +
Sbjct:   14 IMQGTEADKAADYANYFCSYAYLYHQKQMLMDHVRMRAYHSSIMLNKDKFRGKVVLDVGTGSGILSIWAAQAGAAKVYACEYTDMANHARKLVEANGLSHIVEVIQSSVEDLQLPGQVDIIISEWMGYILLRESMLDSVIRARNRWLKPDGAMFPSHATMYLSAISYEDDRQCKIDEFTSSMRDWKVFSEEMKHYYNVDVGALTNTFHKEQEEYYVYSGLWTELKTEHVVGQPVIIKKLDLNTCTLKDAEGVDTVPYDIEIPFNATVSGFAGWFTVDFNGSVPSPVNKRVVLSTGPEAGNTHWGQQVFYLKEAVDCTPGTHLHGKVAMVRQEKNKRLYNLVL 355          
BLAST of mRNA_S-firma_F_contig10.44.1 vs. uniprot
Match: W7TTE4_9STRA (Ribosomal L11 methyltransferase, PrmA n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TTE4_9STRA)

HSP 1 Score: 388 bits (997), Expect = 4.050e-123
Identity = 205/376 (54.52%), Postives = 260/376 (69.15%), Query Frame = 3
Query:  135 TVMGGSDSQKASDYANYFCSYASLYHQKQMLTDHRRMQAYYSAITDNAELFAGKRVLDVGTGSGILALWAAKAGASKVYAVEFTDMANHARRLVAKNGMEDVVEVIQCSVEDLKL--DAKVDIIISEWMGYFLLRESMLDSLVRARDRWLIP-GGLMFPSRCTMMWGLVSDEQDRLSKQQEYIRTMQDWYSFKAETKEFYGVDMTVLEAVYEEEQRGYYILSSFWAELDRDQVLGEPAVVRTFDMHTCTLEDVQGVDETNVSITV-----EDDARVSGFAGWFTADFHGTEAN--PCPCPVTLSTGPENGYTHWGQQVFHLQVPHDVVGGGKVEGTIAVKRQKENVRLYDVYIKHKNVLPTGEDKSPLVSVKYAMP 1232
            T+M G    KA D+A YFCSYA LYHQKQMLTDHRRM AY+ AI  N+ +F GK V+DVGTG+G+LA+W+AKAGA +V AVE+TDMA  AR +VA+NG++ +VEV Q S E+++      VDII+SEWMGYFLLRESMLDSLVR R+++L   GG MFPS  TM W L+ DE++R  K+QEY + ++DW +F  +TKEFY +DM  L A YEEEQ+ YY+LSS WAEL  +QV+ EP V+R  D+ +CT E+++GV ET     +      +   VSGFAGWFT DF G      P P P TLST P+ GYTHWGQQVFH+ V  ++  G  VEGT+ + RQ EN RLY V +  +  +  G   S LV  KY MP
Sbjct:   40 TIMKGDAGAKAKDFAEYFCSYAYLYHQKQMLTDHRRMFAYHEAIMKNSSVFEGKTVVDVGTGTGVLAVWSAKAGAKRVVAVEYTDMAKMARVIVAQNGVDAIVEVQQGSAEEMEEVEPGSVDIIVSEWMGYFLLRESMLDSLVRVREKYLKKEGGHMFPSHATMYWALIEDERERQVKEQEYQQALEDWQTFSHQTKEFYDLDMAGLTAQYEEEQKEYYLLSSSWAELRAEQVVAEPVVIRRLDLKSCTFEEIKGVPETPFQFVIPPNDNNEPVYVSGFAGWFTTDFFGNAPGIEPLPHPTTLSTAPDVGYTHWGQQVFHVVVGLELFPGDVVEGTVTLVRQVENARLYHVEVAFQ--VRRGGVTSKLVRHKYQMP 413          
BLAST of mRNA_S-firma_F_contig10.44.1 vs. uniprot
Match: A0A812S7V0_SYMMI (PRMT10 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812S7V0_SYMMI)

HSP 1 Score: 363 bits (931), Expect = 1.420e-114
Identity = 177/313 (56.55%), Postives = 229/313 (73.16%), Query Frame = 3
Query:  225 LTDHRRMQAYYSAITDNAELFAGKRVLDVGTGSGILALWAAKAGASKVYAVEFTDMANHARRLVAKNGMEDVVEVIQCSVEDLKLDAKVDIIISEWMGYFLLRESMLDSLVRARDRWLIPGGLMFPSRCTMMWGLVSDEQDRLSKQQEYIRTMQDWYSFKAETKEFYGVDMTVLEAVYEEEQRGYYILSSFWAELDRDQVLGEPAVVRTFDMHTCTLEDVQGVDETNVSITVEDDARVSGFAGWFTADFHGTEANPCPCPVTLSTGPENGYTHWGQQVFHLQVPHDVVGGGKVEGTIAVKRQKENVRLYDVYI 1163
            + DH RM+AY+ AI  N  LF GK +LDVGTGSG+L++WAA+AGA+KV+A+EFT+MA HAR LV  NGM D+VEVIQ SVED+ L  +VDIIISEWMGYFLLRESMLDS++RAR++W+ PGG MFPS  TM+ G +S+EQDR  K  +Y ++M +W+ FK E +EFY VDM +LE  + +EQ  YYI SS W EL ++ V+G+P VV+  D++TC LED  GV  T     V    R SGFAGWFT DF G+  NP    VTLSTGPE GYTHWGQQVF+ +   + V G  + GT+++ RQ++N RLY++ +
Sbjct:    1 MMDHVRMRAYHDAIMANKSLFEGKIILDVGTGSGVLSIWAAQAGAAKVFAIEFTEMAMHARALVEANGMSDIVEVIQSSVEDINLPCQVDIIISEWMGYFLLRESMLDSVIRARNKWMKPGGSMFPSTATMLLGCISNEQDREGKFDDYSQSMHEWHMFKQEMQEFYQVDMNILEPKFTKEQEDYYIYSSLWTELSQEHVIGQPVVVKRLDLNTCALEDALGVAPTEYRFDVPYPVRASGFAGWFTVDFAGSVENPAEKRVTLSTGPEMGYTHWGQQVFYWKEAVNCVPGTVISGTMSLVRQEKNKRLYNMEV 313          
BLAST of mRNA_S-firma_F_contig10.44.1 vs. uniprot
Match: A0A6U5M0R9_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5M0R9_9STRA)

HSP 1 Score: 365 bits (936), Expect = 1.830e-113
Identity = 207/413 (50.12%), Postives = 262/413 (63.44%), Query Frame = 3
Query:  147 GSDSQKASDYANYFCSYASLYHQKQMLTDHRRMQAYYSAITDNAELFAGKRVLDVGTGSGILALWAAKAGASKVYAVEFTDMANHARRLVAKNGMEDVVEVIQCSVEDLKL-------------DAKVDIIISEWMGYFLLRESMLDSLVRARDRWLIPG-GLMFPSRCTMMWGLVSDEQDRLSKQQEYIRTMQDWYSFKAETKEFYGVDMTVLEAVYEEEQRGYYILSSFWAELDRDQVLGEPAVVRTFDMHTCTLEDVQGV------DETNVSITVEDD--------------ARVSGFAGWFTADFH------GTEANPCPCPVTLSTGPENGYTHWGQQVFHLQVPHDVVGGG--KVEGTIAVKRQKENVRLYDVYIKHKNVLP-TGEDKS--------PLVSVKYAMP 1232
            G D  +A+D+ANYFCSYA LYHQKQMLTDH+RM+AYY AI  NA++F  K V+DVGTGSGILA+WAA AGA +VYAVE+TDMANHARRLV +NG+  VV VIQ +VED+               D  +DIIISEWMGYFLLRESMLDSL+RARD++L    GLMFPS  TM +  V DE++R +  +EY  +M DW  F   TK  YGVDM  L++ ++ EQ+ YY+LSS W EL  +QVL EP +V+  DM TCTLE+ +G+         +  +  EDD              A VSGF+GWFTADF       G+ A     P  LSTGPENGYTHWGQQVFHL     V+ G   +++G + + R K+N RLY+  ++       TGE K+        P++   Y +P
Sbjct:   47 GDDRARATDFANYFCSYAQLYHQKQMLTDHKRMEAYYDAIMGNADVFRDKVVMDVGTGSGILAVWAAHAGARRVYAVEYTDMANHARRLVEENGVGHVVTVIQGAVEDIDPQSLEGGKEAMECNDGCIDIIISEWMGYFLLRESMLDSLIRARDKFLKKNTGLMFPSHTTMYFAPVMDEEERKTSVKEYTSSMTDWNDFVESTKTMYGVDMGALDSAFQREQKEYYLLSSRWCELRMEQVLAEPCMVKYLDMCTCTLEESRGILRGAPGSSFDFDVVGEDDDTASSSLNPMPARHAVVSGFSGWFTADFKSRTDADGSMAPKISHPTLLSTGPENGYTHWGQQVFHLLSNIPVIRGQTTRIKGELELARNKDNARLYNCRVRFSTTRRRTGEPKAAGTVLMNGPVIETVYQIP 459          
BLAST of mRNA_S-firma_F_contig10.44.1 vs. uniprot
Match: A0A448ZRU7_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZRU7_9STRA)

HSP 1 Score: 357 bits (916), Expect = 5.260e-111
Identity = 193/393 (49.11%), Postives = 258/393 (65.65%), Query Frame = 3
Query:  129 KLTVMGGSDSQKASDYANYFCSYASLYHQKQMLTDHRRMQAYYSAITDNAELFAGKRVLDVGTGSGILALWAAKAGASKVYAVEFTDMANHARRLVAKNGMEDVVEVIQCSVEDLKLDAK---------------VDIIISEWMGYFLLRESMLDSLVRARDRWLIPG-GLMFPSRCTMMWGLVSDEQDRLSKQQEYIRTMQDWYSFKAETKEFYGVDMTVLEAVYEEEQRGYYILSSFWAELDRDQVLGEPAVVRTFDMHTCTLEDVQGVDET----NVSITVEDDAR---VSGFAGWFTADFH------GTEANPCPCPVTLSTGPENGYTHWGQQVFHLQVPHDVVGGGK--VEGTIAVKRQKENVRLYDVYIKHKNVLPTGEDKSPLVS 1214
            ++    G +  KA+D+ANYFCSYA LYHQKQML DH RM AY+SAI  N+++F  K V+DVGTGSGIL++WAA+AGA KVYA+E+TDMA HAR+++  NG+ED+V VIQ +VE++KL  +               VDI+ISEWMGYFLLRESMLDSL+RARD++L P  GLMFPS CTM    V+DE++R     ++  TM DW  F+  TK+ YGV+M VL+  +++EQR Y++ SS W EL ++ VL  P  ++ +DM TCT+ED +GV  +    +    V  D +   +SG AGWFT+DF       G +A     P  LSTGPENGYTHWGQQVF+ Q    ++ G    ++G + + R KEN RLY+  IKH       E  + L+S
Sbjct:   21 EIPSFNGDEQAKATDFANYFCSYAQLYHQKQMLADHNRMAAYHSAILGNSDVFKDKVVMDVGTGSGILSVWAAQAGARKVYAIEYTDMAKHARQVMKANGVEDIVTVIQGAVEEIKLPIEEDSLESDCPEHPERVVDIVISEWMGYFLLRESMLDSLIRARDKYLKPATGLMFPSHCTMYVAPVNDEEERRINCSDHAATMSDWDEFQETTKQVYGVNMEVLKKDFDKEQRDYFLWSSRWRELPQESVLANPKAIKYYDMMTCTVEDSKGVQASEELSSFEFGVSGDRKQGPISGIAGWFTSDFKSRTDEGGGDAPKLSAPAFLSTGPENGYTHWGQQVFYFQSGIPLMKGQTTHLKGGLEMTRTKENARLYNCRIKHTATRTANESGNVLMS 413          
BLAST of mRNA_S-firma_F_contig10.44.1 vs. uniprot
Match: A0A6U3STS5_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3STS5_9STRA)

HSP 1 Score: 353 bits (906), Expect = 1.710e-109
Identity = 197/404 (48.76%), Postives = 259/404 (64.11%), Query Frame = 3
Query:  129 KLTVMGGSDSQKASDYANYFCSYASLYHQKQMLTDHRRMQAYYSAITDNAELFAGKRVLDVGTGSGILALWAAKAGASKVYAVEFTDMANHARRLVAKNGMEDVVEVIQCSVEDLKLDAK--------------------VDIIISEWMGYFLLRESMLDSLVRARDRWLIPG-GLMFPSRCTMMWGLVSDEQDRLSKQQEYIRTMQDWYSFKAETKEFYGVDMTVLEAVYEEEQRGYYILSSFWAELDRDQVLGEPAVVRTFDMHTCTLEDVQGVDETNVSITVEDDAR-------VSGFAGWFTADFH------GTEANPCPCPVTLSTGPENGYTHWGQQVFHLQVPHDVVGGG--KVEGTIAVKRQKENVRLYDVYIKHKNVL-PTGEDKSPLVSVKYAM 1229
            ++    G+++ KA+D+ANYFCSYA LYHQKQML DH RM AY++AI  N+ +F  K V+DVGTGSGILA+WAA+AGA +VYA+E+TDMA HAR ++  NG+ D+V VIQ +VED+ L A+                    VDI+ISEWMGYFLLRESMLDS++RARD++L    GLM PS  TM +  V DE++R     +Y  +M DW  F   TK  YGVDM+VLE  +E EQR YY LSS W+EL+   VL EP +V+  DM TCTLE+ +G+   +   T + D +       +SGFAGWFTADF       G  A   P P  LSTGP +GYTHWGQQ F+L     ++ G   ++EG+I + R K+N RLY+  I+HK+      E+K   V +K A+
Sbjct:   16 EIPSFNGNETAKATDFANYFCSYAQLYHQKQMLADHNRMAAYHAAIMGNSSVFKDKVVMDVGTGSGILAVWAAQAGARRVYAIEYTDMAKHARSVMQANGVADIVTVIQGAVEDIVLPAEDDFEAEEDDMTDGSAKGTRVVDIMISEWMGYFLLRESMLDSIIRARDKFLKRRTGLMMPSHTTMYFAPVQDEEERKHSSNDYNASMSDWSEFADTTKTVYGVDMSVLERSFEREQREYYSLSSRWSELEPAAVLSEPKIVKVLDMTTCTLEESKGIFAGDPYSTFDFDVKGDEVVGPISGFAGWFTADFKSRTDEAGIGAPKLPSPAFLSTGPNDGYTHWGQQTFYLLSSIPLLKGETTRLEGSIEMSRSKDNARLYNCRIRHKSSRRKNAEEKEGTVLMKGAL 419          
BLAST of mRNA_S-firma_F_contig10.44.1 vs. uniprot
Match: D7FL25_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL25_ECTSI)

HSP 1 Score: 356 bits (914), Expect = 1.730e-109
Identity = 185/362 (51.10%), Postives = 241/362 (66.57%), Query Frame = 3
Query:  153 DSQKASDYANYFCSYASLYHQKQMLTDHRRMQAYYSAITDNAELFAGKRVLDVGTGSGILALWAAKAGASKVYAVEFTDMANHARRLVAKNGMEDVVEVIQCSVEDLKLDAKVDIIISEWMGYFLLRESMLDSLVRARDRWLIPGGLMFPSRCTMMWGLVSDEQDRLSKQQEYIRTMQDWYSFKAETKEFYGVDMTVLEAVYEEEQRGYYILSSFWAELDRDQVLGEPAVVRTFDMHTCTLEDVQGVDETNVSITVEDDAR-VSGFAGWFTADFHGTEA-NPCPCPVTLSTGPENGYTHWGQQVFHLQVPHDVVGGGKVEGTIAVKRQKENVRLYDVYIKHKNVLPTGEDKSPLVSVKYAMP 1232
            D  +++D+ANYF SYA L HQKQML D RRM+AY +++  N + F GK VLDVG+GSG+LA++AA+AGA KVYAVE+TDMA HAR +V KNG  DV++VIQ S E ++L  KVD+I+SEWMGYFLLRESMLDS+V ARD+WL   G+MFPS  TM+W  V D   +  +  +Y  ++  W +F     + YGVDM+ L+  YEEE  G + LSS W EL   QV+ EP  V+  D+HTC+LED +G+ +T  S  + D A  V+GFAGWF   F G +   P   PV  ST P  GYTHWGQQVF+LQ P        VEGT+++ RQ  N RLY+V ++H+    +G   S  VS  Y +P
Sbjct:  153 DEIESADFANYFYSYAELEHQKQMLEDDRRMEAYRNSMLLNRDAFEGKTVLDVGSGSGVLAIFAAQAGAKKVYAVEYTDMAKHARTMVEKNGFGDVIQVIQGSAESIQLPEKVDVIVSEWMGYFLLRESMLDSVVVARDKWLKDTGVMFPSHATMVWAPVDDGDQKYRRDTDYQNSLSGWSTFSEHAMQRYGVDMSGLDKAYEEECAGVFSLSSLWRELAGHQVVSEPVTVKELDLHTCSLEDTKGLAKTLFSFPLRDGAPPVTGFAGWFDVSFRGRDGVAPLQRPVEFSTAPAAGYTHWGQQVFYLQEPVVAAEDATVEGTVSMVRQANNPRLYNVKVEHRLSFASGTTDSQQVSSVYKIP 514          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10.44.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K9S3_9PHAE1.090e-25692.84Methyltransf_25 domain-containing protein n=2 Tax=... [more]
A0A835YPE5_9STRA5.200e-17770.41S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A7S2V4Q5_9STRA9.300e-13859.41Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A482SBI8_9ARCH1.020e-12355.85Class I SAM-dependent methyltransferase n=1 Tax=ar... [more]
W7TTE4_9STRA4.050e-12354.52Ribosomal L11 methyltransferase, PrmA n=2 Tax=Mono... [more]
A0A812S7V0_SYMMI1.420e-11456.55PRMT10 protein n=1 Tax=Symbiodinium microadriaticu... [more]
A0A6U5M0R9_9STRA1.830e-11350.12Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A448ZRU7_9STRA5.260e-11149.11Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A6U3STS5_9STRA1.710e-10948.76Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
D7FL25_ECTSI1.730e-10951.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10contigS-firma_F_contig10:847..7804 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Seed ortholog2880.D8LB79
Preferred namePRMT10
PFAMsPrmA
Max annot lvl2759|Eukaryota
KEGG rclassRC00003,RC02120,RC03388,RC03390
KEGG koko:K11434
KEGG ReactionR11216,R11217,R11219
KEGG Pathwayko04068,ko04922,map04068,map04922
GOsGO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006325,GO:0006355,GO:0006464,GO:0006479,GO:0006807,GO:0006996,GO:0007275,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008469,GO:0008757,GO:0009791,GO:0009889,GO:0009987,GO:0010228,GO:0010468,GO:0010556,GO:0016043,GO:0016273,GO:0016274,GO:0016277,GO:0016569,GO:0016570,GO:0016571,GO:0016740,GO:0016741,GO:0018193,GO:0018195,GO:0018216,GO:0019219,GO:0019222,GO:0019538,GO:0019919,GO:0022414,GO:0031323,GO:0031326,GO:0032259,GO:0032501,GO:0032502,GO:0034969,GO:0035241,GO:0035242,GO:0035246,GO:0035247,GO:0036211,GO:0042054,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0048608,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0051276,GO:0060255,GO:0061458,GO:0065007,GO:0071704,GO:0071840,GO:0080090,GO:0140096,GO:1901564,GO:1903506,GO:2000112,GO:2001141
Evalue1.65e-266
EggNOG OGsCOG0500@1|root,KOG1499@2759|Eukaryota
EC2.1.1.319
Descriptionprotein-arginine omega-N asymmetric methyltransferase activity
COG categoryQ
BRITEko00000,ko00001,ko01000,ko03036
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionProtein arginine N-methyltransferase
Ec32 orthologEc-27_004880.1
Exons9
Model size2750
Cds size1179
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815520.312786-UTR-S-firma_F_contig10:846..9021622815520.312786-UTR-S-firma_F_contig10:846..902Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10 847..902 +
1696949381.7001212-UTR-S-firma_F_contig10:846..9021696949381.7001212-UTR-S-firma_F_contig10:846..902Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10 847..902 +
1622815520.4605198-UTR-S-firma_F_contig10:6289..78041622815520.4605198-UTR-S-firma_F_contig10:6289..7804Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10 6290..7804 +
1696949382.2775693-UTR-S-firma_F_contig10:6289..78041696949382.2775693-UTR-S-firma_F_contig10:6289..7804Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10 6290..7804 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815520.3302538-CDS-S-firma_F_contig10:902..10291622815520.3302538-CDS-S-firma_F_contig10:902..1029Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10 903..1029 +
1696949381.7790287-CDS-S-firma_F_contig10:902..10291696949381.7790287-CDS-S-firma_F_contig10:902..1029Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10 903..1029 +
1622815520.343747-CDS-S-firma_F_contig10:2431..25091622815520.343747-CDS-S-firma_F_contig10:2431..2509Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10 2432..2509 +
1696949381.8338227-CDS-S-firma_F_contig10:2431..25091696949381.8338227-CDS-S-firma_F_contig10:2431..2509Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10 2432..2509 +
1622815520.3582313-CDS-S-firma_F_contig10:3103..32071622815520.3582313-CDS-S-firma_F_contig10:3103..3207Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10 3104..3207 +
1696949381.8910935-CDS-S-firma_F_contig10:3103..32071696949381.8910935-CDS-S-firma_F_contig10:3103..3207Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10 3104..3207 +
1622815520.3741565-CDS-S-firma_F_contig10:3519..36421622815520.3741565-CDS-S-firma_F_contig10:3519..3642Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10 3520..3642 +
1696949381.9337766-CDS-S-firma_F_contig10:3519..36421696949381.9337766-CDS-S-firma_F_contig10:3519..3642Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10 3520..3642 +
1622815520.3878224-CDS-S-firma_F_contig10:3924..40801622815520.3878224-CDS-S-firma_F_contig10:3924..4080Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10 3925..4080 +
1696949382.0328083-CDS-S-firma_F_contig10:3924..40801696949382.0328083-CDS-S-firma_F_contig10:3924..4080Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10 3925..4080 +
1622815520.401464-CDS-S-firma_F_contig10:4558..46631622815520.401464-CDS-S-firma_F_contig10:4558..4663Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10 4559..4663 +
1696949382.0728097-CDS-S-firma_F_contig10:4558..46631696949382.0728097-CDS-S-firma_F_contig10:4558..4663Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10 4559..4663 +
1622815520.4187937-CDS-S-firma_F_contig10:4999..51371622815520.4187937-CDS-S-firma_F_contig10:4999..5137Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10 5000..5137 +
1696949382.1115863-CDS-S-firma_F_contig10:4999..51371696949382.1115863-CDS-S-firma_F_contig10:4999..5137Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10 5000..5137 +
1622815520.432723-CDS-S-firma_F_contig10:5496..57571622815520.432723-CDS-S-firma_F_contig10:5496..5757Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10 5497..5757 +
1696949382.1722422-CDS-S-firma_F_contig10:5496..57571696949382.1722422-CDS-S-firma_F_contig10:5496..5757Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10 5497..5757 +
1622815520.4456658-CDS-S-firma_F_contig10:6202..62891622815520.4456658-CDS-S-firma_F_contig10:6202..6289Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10 6203..6289 +
1696949382.2296348-CDS-S-firma_F_contig10:6202..62891696949382.2296348-CDS-S-firma_F_contig10:6202..6289Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10 6203..6289 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10.44.1prot_S-firma_F_contig10.44.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig10 903..6289 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig10.44.1

>prot_S-firma_F_contig10.44.1 ID=prot_S-firma_F_contig10.44.1|Name=mRNA_S-firma_F_contig10.44.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=393bp
MENAKTLPPPPAGEVMEPVESVDPKLTVMGGSDSQKASDYANYFCSYASL
YHQKQMLTDHRRMQAYYSAITDNAELFAGKRVLDVGTGSGILALWAAKAG
ASKVYAVEFTDMANHARRLVAKNGMEDVVEVIQCSVEDLKLDAKVDIIIS
EWMGYFLLRESMLDSLVRARDRWLIPGGLMFPSRCTMMWGLVSDEQDRLS
KQQEYIRTMQDWYSFKAETKEFYGVDMTVLEAVYEEEQRGYYILSSFWAE
LDRDQVLGEPAVVRTFDMHTCTLEDVQGVDETNVSITVEDDARVSGFAGW
FTADFHGTEANPCPCPVTLSTGPENGYTHWGQQVFHLQVPHDVVGGGKVE
GTIAVKRQKENVRLYDVYIKHKNVLPTGEDKSPLVSVKYAMP*
back to top

mRNA from alignment at S-firma_F_contig10:847..7804+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig10.44.1 ID=mRNA_S-firma_F_contig10.44.1|Name=mRNA_S-firma_F_contig10.44.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=6958bp|location=Sequence derived from alignment at S-firma_F_contig10:847..7804+ (Sphaerotrichia firma ET2_F female)
ATGCATGCGTCTGTCGTTGAAACAGGCAATTTGCTCTTCTTCCCTCGTTC GTCAAGATGGAAAACGCTAAAACGTTGCCACCGCCGCCAGCAGGAGAAGT GATGGAGCCAGTCGAGAGCGTCGACCCGAAGCTGACCGTGATGGGCGGGA GCGACTCCCAGAAAGCCTCCGACTATGCAAATTGTGAGTCGCGACTTGAC CAGTGATCCACCCTGTCACGCACTTTCGTTGGAAGCACCGCTGCCACCAA TTTCAAAGCAGAAGGAGATCGCTGACTATGATACTGTTGGATCCGTTCCT TTCTGCGCGGTCGGCGTCTTCTTCCTTGGCTCTCGCCAGTCATGAACACC ACTGAAATCGTTGGCGATATTTGTGTGGTGAATCCGACGTCCACACCACT GGCATGCAACAAACAGCACAGCAGATCACCAGAGGGAGAACAGAAAGTGT GGCAGGATTCCAGGTAGAGCATTAGCAGGCTGCGCCGTGTGGTGCTGTCC AGCGCAATCGGTACTGCGTTGCCGGTGGATAAGCACCGTGTGTAGATCAT TTTGGCCGATCTCTGTGTGCCACACACAACGCTCAGCGGAAATCAAGACA CGAGTGATTGCGCCGCATTTTTTTTCTCTTACCGATAGCGGTGGTGGAAT AGTGGAACGAGTTACGTGTGGCAGCTGTTTCCCCCAGATATCCGTCACGT GTGCACTGCAGTTAAAACAGCGGCAGTAGATCAACCGTGCAGGAGGTCTC ACTACAGGTTTCAATAGGGATGGAGAGGAAAAGACTCACCTGTATCCTAC TGCAAATCCGGACACTGCTGTTGTTGCCTGCGGCGGTTCCAACAGCAGAG CCGGGTCCTTTGTGTTTCCGGGTAGACCACGACCGACGAGGGCACACTGG GTGGCACAACAGTTGCGCCTTGGTACGTTGTTAAGAGTGATGCTTGTTGT GTACGGTACAAAGCTCCCACGTCCATCCCAGCGGGAGTGTGTAGTACATT AACACCTTGGGGAGATTGACTACAGCGGTGTTGAAGGTGCGCCGACAGCA GAAAAGTTCCCCGTGATCTTTGGTGAGATGTCTTGCTCTTGTATTTAGAC GCAGTCGTCGCTCGGCCAACCGAGCTACGCTCCGAACTCAAAAACTGCTG TGCTCGTTCACGTGTGTGCAGTACGCTAAATCCGCCCAGAGGACGCGTGT TCGAACTCGAGCTTGGCGTTGACTTGTGGCGAAACACTCTTGTATCTTAT TACCCTCGAGGTGCTACCACTGGGGTGGACGTACTCTTCGCCCAAACAGC CGGAGAGCGAACAACCGGGATGTGCTGTTTCCTCCGTACAAAGTAGGCAG CAGGAAACACTTTTCCCTGATGACGGCTGCTGCACCCATTTTTCACGAGC TTGGTATTGGTGGTTGCCAACTCAAATCAAAACCACCCCGTAGGTAACCC CGGCTCCCAGTTCCATTCACGTGCATGTCTCAACACGACAACAACTTATG ATCGCCAACGAAAGTCTCACCACCTTCCCATCCGCGGCCCTCTCCAACAA CTTTTCTGTACGCGGGCGTTTGTTGCTTTTGGCAGACTTCTGCTCCTACG CCAGCTTGTACCACCAGAAGCAGATGCTCACGGACCACCGCCGAATGCAG GCGTACTACTCGGGTGAGCGAGGAGAACAAACGGCACCGCAGCGCTTGTG TACTCAGCACACGCGGGCGGGGTGTGTTGGTTCAGCACTTGTTGTCGTAC AAGGAAATCCTCGGTGTTGCTCATTTTTTTTCTGTATCCACGCGGTCTTC ACCGCTCCCCCTGTCTACCCAGCACCTCCATATCCCGTTCTGGTCCCAAC CGTTGAGCACGAATCGCGTGGTGACAGCCTTCAACAGCCAAGGAGCTGGT AGAAGTGAAGAGGATCGATCCCACAAAAGGTTTTGTTGCCACGGTGGAAA GAGATGTGGTGCCTACGCAGTCAGCCGAGAGGGTGTGTGGCTTCAAGCTG TCCAGGCTTTGTCGATCCGTTGATGCAGGCCCGCTGCTCCCTGCGGTCAT GTGTGATCCCGGAGGTCTACAAGGTGTTGCTCGCGAGTGCCTTCATCGGA GGGTCTGCGGCTTGCACGGGAATACCCACGACGCGGGATTTTCGCCCGTT CATTTTGGGATCGGACCCCGGGTGGGATTGCCGTCTTTCTCGCCGCGCGT TAACCCCGCTGCTTGCACCTCTCCTTTTCTCGCCTTCTCCTCCTCTTCCT CTCACAGCAATCACGGACAACGCCGAGTTGTTTGCCGGCAAGCGCGTGCT TGACGTGGGCACTGGGAGCGGCATCCTGGCGCTTTGGGCGGCCAAGGCGG GGGCAAGCAAGGTCGGTTTTGTTTTTCTGCGGGCGGGCTCTTGTCTTGGT GCTTTGTCTTCGTTCAGCCGTGGCGAACGTAGCGGGAGCCCTCCCAGGCA TTCCGGTACCCACACCGACCTGCTGCGCTCATGTTGTTCCGACCTTGAGA GTACGCGTTTGTTGGTGTTTGGTTTGACGCTCGCCGACGTCACCACCAAC ACGCATGGCACCTTTGGACCAAGATCGGCGCGTCAACTACGTGGTAGCCG ATGTGGCATATCAGAAGAACACCCCACCACGCAACACTGACGAGATGCTG TTTATCGGTATTCATGCAAACAGGTGTACGCGGTGGAGTTCACCGACATG GCGAACCATGCGCGGCGCCTGGTGGCCAAGAACGGGATGGAGGACGTGGT GGAGGTGATCCAGTGCAGCGTGGAAGACCTCAAGCTGGACGCGAAGGTGC CCGCAACGCAGTCAGTAGTCTCAGTTTTCCGGTGGGGGGGGGGGGTGCAT CCGGGACAATGTGTGTGTGACGCCAAGCGGCTTGAAACCGTGTTGTTGAG TACTGGATTTTCGTTCGTGTGCTTGCGCTGGATCCCACCGCAGAAAGCAA AAACCTGTCCGAATTCGGGTCTGTTTCGGCTCAAAACTCCCCATCCAACT CGCCGTATTCCCTGGAAACAACACGTCAACGGCAAAGCTACCGCTAACGA TCCAATCGTCTGCGTGCTTTAACCCCAGGTGGACATCATTATTTCGGAGT GGATGGGGTACTTCCTGCTGAGGGAGAGCATGCTGGACTCGCTCGTGCGC GCAAGGGATCGATGGTTGATCCCGGGGGGGCTCATGTTCCCGTCGAGATG TACCATGATGTGGGGGCTCGTCAGCGATGAGCAGGTGATACGTCTACCTC CGCTTTCTGTGCAGCTTTTGCACGAAACAAGGAGTGATTTCATCCCGCAA AGGGCTCGTAGCTTGGTTTTCAGAGGCGGAAGACAAGCAGACTTGCAGCA GCTGCTGTTAAAATCGGTGCTGCGTCTTCGCCCCACATTGCTGTCGAGAG GCGTACGGTCATGACCAGGGATGAGCGGGTTTGCTTCCTCATGCGTGGAC GCTCGTCACGCACAATGCCCTCTTGTGTTGTCAAGTACTTCGAAGTGCAA GTCAACTTGGCTGGTCTTCTACCGCTGCTTTTTGCCTGTGCGCCTGGCGA TATGTCCGTGTGGGAGGATCCTGGTGATAATGTGGTCTGTGCTTGCCGGC GTCAAGAGGACAAGTGTGCGGGGAAGAGAGGGCAGCTCTAGTACATCCGA AGAAGTTGCGTTTCTCACGCGCCTGTTCGTTTCTTCCTTGGCCGTATCTC ATGGACTGACAGGACCGACTGTCCAAGCAGCAGGAGTACATCCGCACCAT GCAGGACTGGTACAGCTTCAAGGCGGAGACGAAGGAGTTCTATGGCGTCG ACATGACCGTGCTAGAGGTGATTTTTGTGATGATCCTATGATGGAATAAG TGGCGGTGCTGTGCAGAGAAGAGCGACAGGCACCCTTTCGCGAGCGCCCG CTCACCTCACCTGCATCCGCGTTGAGGTTTTCATTTTGTCTACGTCGCGA AAAAGTGAAGTCGTTTGAATCAAGGCAGAGCAGAGTCCGAATCCACGCGC CCTTGGCCGTTGCAAGCGCAAGGTATTTTCTCAGATAGTTCGAGCATGTT TCGCCGATATCGTATGATATGTCGTGGAGCCTAACCATATATCCACACCA CGCACACACACACGCACGTGTCTGGCTTGCTTGCTTGCGCCCTCGCTCGG AAGGCGGTGTACGAGGAAGAACAGCGGGGTTACTACATCTTGTCGAGCTT CTGGGCGGAGCTGGACAGGGATCAGGTGCTGGGGGAGCCCGCCGTGGTGC GAACGTTCGACATGCACACGTGCACTCTCGAGGACGTGCAGGTAAGAGGC ACCCAGGGCCGGCCGGGGTTCAGATTGTTGCCTTGTGTTCGACGCAGCTT TTTTTTTAAACATCGAACGATGAGTAGGAACCTCCCGACCACAGGAGTAC GCGATTGTGGGACACGAGAGATCTTGCCTCGCAGCGATGATGAATCAATC CTGCCTGTGTCGTGGAGGCATCAAGTCGCACACACTGGAAAGCGTGGAAA CTGCTTGGTATCCGATCACGCGAATGGTACAGGTTTTCCTTATTTGGCCC CCTTAAAACCATGAATATGCGCGCCGCTTCGCCGTCGTTGTCGGAATTTC GCCGTTTCTTTGTGCTCGACCACGTGCAACCTGCGTCGGCTGGCCACCAG GGCGTCGACGAGACGAACGTGTCCATCACGGTAGAGGACGACGCCAGGGT GTCCGGCTTCGCCGGGTGGTTCACCGCCGACTTCCACGGCACCGAGGCCA ACCCGTGCCCGTGCCCGGTCACGCTCTCCACGGGCCCGGAGAACGGGTAC ACGCACTGGGGGCAGCAGGTGTTCCACTTGCAAGTGCCGCACGACGTGGT CGGGGGGGGCAAGGTGGAGGGCACGATCGCGGTCAAGAGGCAGAAGGAGA ACGTTCGGTTGGTGAGTCCGGCGGTGGTTGTGGCGTGCCGGCAGTTTTGT GTTGTTGTTTGCGACACACGAGGACGGTTAAGAAAAGGACGAAGAGTTTG CTGTCTCAGCCGTGGACAGCTACACCTGTAGACGCTTACTTCGCACGTTG GGAGGTTCTGCCTTTTACGCCCGCGGGCGGCGGAGAGACAACCATGCGTC GGCGTAAGTCACGAGCCGGTTCCCACGGATGGGTAAATTATCACGTTGGC GACGAGACCGTCGTCGGATGATAGATACTCGTAGTGTGCTTTTGGTCGTG GTCGTGGCGGTCCATGCAGCACGTGTACAGTGAGCGTGTGTGTGCACTGG ACGCCACAACGAAGGCATGCTCGCGGCAAACAAGACTTGTGTCGGTGTCG TGACCACCTCGCCGAAATGTCCTCGTCTCTTCGTTCGTTGCTTCCGTCTC TCGCAGTACGACGTCTACATCAAGCACAAGAACGTGCTGCCGACCGGTGA GGACAAGTCGCCCCTGGTGTCTGTAAAGTACGCCATGCCATAAAGGCTGA GAGTGTGCGACACGAAAGAAGCACGTGTTGACCCCAGTTCTAGCAACCCG GAAGGCTGAGAGCGAGGCCCAGCGCTGACGTAGGTGTGGCGTGGAGGCCG GAGATGGAGCGGGCAGCTTGTGTAACGAACACCCGGTGGGGCTATTGACT GTTCTAGTTCTCGACCGTTGCAGATCGGTAATAGCGCCGCTAGGTCTACT GTCGGCGGCTCTAGTAGGGTATATATATTGCGGCTCGCCAGAGAATGCGC AGTAAGAATATCGCCGCGGTGTCACCTTGGCTGCATCAACAACCAGGTAC TGCGCAATCTCGCGACCCGAGTGTGTTGTGTTTTGTTTTCCGTTTGTGTG TTTTTTGTTTTGAAGAGAGTCGAGGCCCGTCGCCAGGTCGACGTGACGCA TCAGAGGTAATCGCCCAACAAACTTATGTAGCTCGCAGCGCACGCAAGTT TTCGCGTTGCGCCTCGCGGAGGAGAGGTAGCGATATCTGGCTTCTCCGCA CCACCTCTTAACGTTTTTTGGAAACGAAAAATGTCCACACCCGCTGGAGA GCGATCGGTGGCCGAGTTAGCGCGGTTGGTACGGCAATACGTTCGGTTCT CGGAGGATTCTTGATGACTTGGGCATGTGGAGGAGGGCGGGGTGGGCGGA ATTTTCCGGCCTTTTGACCATCGAGGCTAGTTGATTAAAAGCTATTTGTG TTCGTCACTTGTGTTCCGTCACGTGATGTTCCCACTTGTTGTACGATCTG CATGGACCGTAGTTCTTCTTTGGGCTGCGTCGCAGCCTGTGCGTGCGCAC GAGACGGGTTCGATACAAGGAGTAGGGCTAGAAGACGGCGTTTATGTGGG AGTGGCATGTGTTTCGTGTGCGTGCTAAGTGAGGCAAGCTTTCGACGGCG GCAAGGGGTTTCAAAAAGCCCGTCCAGTTCTCTGCCTCACTGTTTTTGTG TGTAGGGGGGGTAGGGTTGAATAGGTTGAATAAGATGTTGCGGTGTGTGG GGACATGCGGAAATGCGGGCTGAAGCACGGAACTCGGTTTGTATCATGGG CGCCTCTTGGTTTATTCGGGTCGCATGCAGGTTGTTCTTGTTTGGGCACA ACGGACAAAGGGTAGTTGAAATTTGAAAATGTACCCATGTACCCGGAGAT GTGGTTGGTATCAAGCGGCGGCTATCCGAGAGGGGGCCTGGGTCTGGGCC TGGTATATTTATTTTTTATGTGGAGGGGATTGTTTTGAAGATAACAATTT TTTCCCCGGATTAGGGTGTTTGGCCGTGATAGTAGGCATGATTCTTGTGT GTGGAGGTCCCATGTATCCTTGTTCGACCATGTATGCAAAGAACGAAGAA TGATGCACACTTTGACCGCGGGGAATCCTTCTGTTCTTCGTATGTACTTC GAAGTTTCACTATTATGGTGTCGACTTCTACTACTCCCTCTGCTTGTCAA TCGATGGCGGCGTCTGGACCATTAACGGTGGTACTCCTACGCCTTCCTTG GGTGTTGG
back to top

Coding sequence (CDS) from alignment at S-firma_F_contig10:847..7804+

>mRNA_S-firma_F_contig10.44.1 ID=mRNA_S-firma_F_contig10.44.1|Name=mRNA_S-firma_F_contig10.44.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=2358bp|location=Sequence derived from alignment at S-firma_F_contig10:847..7804+ (Sphaerotrichia firma ET2_F female)
ATGGAAAACGCTAAAACGTTGCCACCGCCGCCAGCAGGAGAAGTGATGGA
GCCAGTCGAGAGCGTCGACCCGAAGCTGACCGTGATGGGCGGGAGCGACT
CCCAGAAAGCCTCCGACTATGCAAATTATGGAAAACGCTAAAACGTTGCC
ACCGCCGCCAGCAGGAGAAGTGATGGAGCCAGTCGAGAGCGTCGACCCGA
AGCTGACCGTGATGGGCGGGAGCGACTCCCAGAAAGCCTCCGACTATGCA
AATTACTTCTGCTCCTACGCCAGCTTGTACCACCAGAAGCAGATGCTCAC
GGACCACCGCCGAATGCAGGCGTACTACTCGGACTTCTGCTCCTACGCCA
GCTTGTACCACCAGAAGCAGATGCTCACGGACCACCGCCGAATGCAGGCG
TACTACTCGGCAATCACGGACAACGCCGAGTTGTTTGCCGGCAAGCGCGT
GCTTGACGTGGGCACTGGGAGCGGCATCCTGGCGCTTTGGGCGGCCAAGG
CGGGGGCAAGCAAGCAATCACGGACAACGCCGAGTTGTTTGCCGGCAAGC
GCGTGCTTGACGTGGGCACTGGGAGCGGCATCCTGGCGCTTTGGGCGGCC
AAGGCGGGGGCAAGCAAGGTGTACGCGGTGGAGTTCACCGACATGGCGAA
CCATGCGCGGCGCCTGGTGGCCAAGAACGGGATGGAGGACGTGGTGGAGG
TGATCCAGTGCAGCGTGGAAGACCTCAAGCTGGACGCGAAGGTGTACGCG
GTGGAGTTCACCGACATGGCGAACCATGCGCGGCGCCTGGTGGCCAAGAA
CGGGATGGAGGACGTGGTGGAGGTGATCCAGTGCAGCGTGGAAGACCTCA
AGCTGGACGCGAAGGTGGACATCATTATTTCGGAGTGGATGGGGTACTTC
CTGCTGAGGGAGAGCATGCTGGACTCGCTCGTGCGCGCAAGGGATCGATG
GTTGATCCCGGGGGGGCTCATGTTCCCGTCGAGATGTACCATGATGTGGG
GGCTCGTCAGCGATGAGCAGGTGGACATCATTATTTCGGAGTGGATGGGG
TACTTCCTGCTGAGGGAGAGCATGCTGGACTCGCTCGTGCGCGCAAGGGA
TCGATGGTTGATCCCGGGGGGGCTCATGTTCCCGTCGAGATGTACCATGA
TGTGGGGGCTCGTCAGCGATGAGCAGGACCGACTGTCCAAGCAGCAGGAG
TACATCCGCACCATGCAGGACTGGTACAGCTTCAAGGCGGAGACGAAGGA
GTTCTATGGCGTCGACATGACCGTGCTAGAGGACCGACTGTCCAAGCAGC
AGGAGTACATCCGCACCATGCAGGACTGGTACAGCTTCAAGGCGGAGACG
AAGGAGTTCTATGGCGTCGACATGACCGTGCTAGAGGCGGTGTACGAGGA
AGAACAGCGGGGTTACTACATCTTGTCGAGCTTCTGGGCGGAGCTGGACA
GGGATCAGGTGCTGGGGGAGCCCGCCGTGGTGCGAACGTTCGACATGCAC
ACGTGCACTCTCGAGGACGTGCAGGCGGTGTACGAGGAAGAACAGCGGGG
TTACTACATCTTGTCGAGCTTCTGGGCGGAGCTGGACAGGGATCAGGTGC
TGGGGGAGCCCGCCGTGGTGCGAACGTTCGACATGCACACGTGCACTCTC
GAGGACGTGCAGGGCGTCGACGAGACGAACGTGTCCATCACGGTAGAGGA
CGACGCCAGGGTGTCCGGCTTCGCCGGGTGGTTCACCGCCGACTTCCACG
GCACCGAGGCCAACCCGTGCCCGTGCCCGGTCACGCTCTCCACGGGCCCG
GAGAACGGGTACACGCACTGGGGGCAGCAGGTGTTCCACTTGCAAGTGCC
GCACGACGTGGTCGGGGGGGGCAAGGTGGAGGGCACGATCGCGGTCAAGA
GGCAGAAGGAGAACGTTCGGTTGGGCGTCGACGAGACGAACGTGTCCATC
ACGGTAGAGGACGACGCCAGGGTGTCCGGCTTCGCCGGGTGGTTCACCGC
CGACTTCCACGGCACCGAGGCCAACCCGTGCCCGTGCCCGGTCACGCTCT
CCACGGGCCCGGAGAACGGGTACACGCACTGGGGGCAGCAGGTGTTCCAC
TTGCAAGTGCCGCACGACGTGGTCGGGGGGGGCAAGGTGGAGGGCACGAT
CGCGGTCAAGAGGCAGAAGGAGAACGTTCGGTTGTACGACGTCTACATCA
AGCACAAGAACGTGCTGCCGACCGGTGAGGACAAGTCGCCCCTGGTGTCT
GTAAAGTACGCCATGCCATAATACGACGTCTACATCAAGCACAAGAACGT
GCTGCCGACCGGTGAGGACAAGTCGCCCCTGGTGTCTGTAAAGTACGCCA
TGCCATAA
back to top