mRNA_S-ischiensis_contig15.3795.1 (mRNA) Schizocladia ischiensis KU_0333
|
Overview
Homology
BLAST of mRNA_S-ischiensis_contig15.3795.1 vs. uniprot
Match: A0A7S0PH88_CAFRO (Hypothetical protein (Fragment) n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0PH88_CAFRO) HSP 1 Score: 96.3 bits (238), Expect = 3.500e-21 Identity = 42/79 (53.16%), Postives = 59/79 (74.68%), Query Frame = 1
Query: 1 LNWGITTFDNIGAAVLTIFQCITMEGWTNVLYMHMDGYSTWFSAIFFCTVVIVGSFFMINLLFAVMWEKFSSFQDMSDE 237
LNWG+T+FD+I AVL+IFQ ITMEGWT ++YM MD Y+ ++F +++ GSFF++NLL AV+WE+FS Q +E
Sbjct: 437 LNWGLTSFDHILVAVLSIFQSITMEGWTTIMYMVMDSYNGVVGGVYFVVLILFGSFFLLNLLLAVIWEQFSESQKQEEE 515
BLAST of mRNA_S-ischiensis_contig15.3795.1 vs. uniprot
Match: A0A5A8D5B1_CAFRO (Uncharacterized protein n=5 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D5B1_CAFRO) HSP 1 Score: 96.3 bits (238), Expect = 4.210e-21 Identity = 42/79 (53.16%), Postives = 59/79 (74.68%), Query Frame = 1
Query: 1 LNWGITTFDNIGAAVLTIFQCITMEGWTNVLYMHMDGYSTWFSAIFFCTVVIVGSFFMINLLFAVMWEKFSSFQDMSDE 237
LNWG+T+FD+I AVL+IFQ ITMEGWT ++YM MD Y+ ++F +++ GSFF++NLL AV+WE+FS Q +E
Sbjct: 401 LNWGLTSFDHILVAVLSIFQSITMEGWTTIMYMVMDSYNGVVGGVYFVVLILFGSFFLLNLLLAVIWEQFSESQKQEEE 479
BLAST of mRNA_S-ischiensis_contig15.3795.1 vs. uniprot
Match: A0A7S1G9I4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G9I4_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 6.300e-20 Identity = 43/85 (50.59%), Postives = 60/85 (70.59%), Query Frame = 1
Query: 1 LNWGITTFDNIGAAVLTIFQCITMEGWTNVLYMHMDGYSTWFSAIFFCTVVIVGSFFMINLLFAVMWEKFSSFQDMSDEVVEIAA 255
LNWG T FDN+ AA+LTIFQ ITMEGWT+V+Y D ++ SA++F +++ GSFF++NL AV+W+ FS +D+ E AA
Sbjct: 324 LNWGYTNFDNMFAALLTIFQMITMEGWTDVMYQVQDAHNAVVSAVYFIFLILFGSFFLLNLTLAVIWDNFSMGSKEADDEAEAAA 408
BLAST of mRNA_S-ischiensis_contig15.3795.1 vs. uniprot
Match: A0A0R3WUB9_HYDTA (Ion_trans domain-containing protein n=1 Tax=Hydatigena taeniaeformis TaxID=6205 RepID=A0A0R3WUB9_HYDTA) HSP 1 Score: 88.6 bits (218), Expect = 8.080e-20 Identity = 39/70 (55.71%), Postives = 55/70 (78.57%), Query Frame = 1
Query: 4 NWGITTFDNIGAAVLTIFQCITMEGWTNVLYMHMDGYSTWFSAIFFCTVVIVGSFFMINLLFAVMWEKFS 213
N+GIT+FDNIG A+LT+FQCITMEGWT+++YM D FSA +F ++I+GSFFM+NL+ V+ +F+
Sbjct: 94 NFGITSFDNIGYAMLTVFQCITMEGWTDIMYMTFDAVGDRFSAFYFSPLIILGSFFMLNLILGVLSGEFA 163
BLAST of mRNA_S-ischiensis_contig15.3795.1 vs. uniprot
Match: A0A7J6Q648_PEROL (Ion_trans domain-containing protein (Fragment) n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6Q648_PEROL) HSP 1 Score: 84.7 bits (208), Expect = 4.200e-19 Identity = 35/69 (50.72%), Postives = 53/69 (76.81%), Query Frame = 1
Query: 4 NWGITTFDNIGAAVLTIFQCITMEGWTNVLYMHMDGYSTWFSAIFFCTVVIVGSFFMINLLFAVMWEKF 210
N+ IT FDN+ A LT+FQ IT+EGWT+V+Y+ D +S WF++ +F ++IVGSFF++N+ AV+W+ F
Sbjct: 56 NFRITRFDNLLGAALTVFQSITLEGWTDVMYLLQDSHSDWFASAYFVVLIIVGSFFLLNVALAVVWDAF 124
BLAST of mRNA_S-ischiensis_contig15.3795.1 vs. uniprot
Match: A0A2A4TCJ7_9BACT (Ion_trans domain-containing protein n=1 Tax=Candidatus Kaiserbacteria bacterium TaxID=2030810 RepID=A0A2A4TCJ7_9BACT) HSP 1 Score: 85.9 bits (211), Expect = 4.470e-19 Identity = 40/77 (51.95%), Postives = 55/77 (71.43%), Query Frame = 1
Query: 7 WGITTFDNIGAAVLTIFQCITMEGWTNVLYMHMDGYSTWFSAIFFCTVVIVGSFFMINLLFAVMWEKFSSFQDMSDE 237
+GI TFDNIG ++TIFQ IT+EGW +++Y MD T FSAIFFC +V++GSFFM+ L+ AV+ F S + +E
Sbjct: 61 YGIVTFDNIGIGMITIFQIITLEGWVDMMYDLMDNSQTIFSAIFFCLMVLIGSFFMLQLILAVIMGTFDSMEKDEEE 137
BLAST of mRNA_S-ischiensis_contig15.3795.1 vs. uniprot
Match: A0A6J8BFX2_MYTCO (CACNA1B n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8BFX2_MYTCO) HSP 1 Score: 89.7 bits (221), Expect = 6.220e-19 Identity = 39/70 (55.71%), Postives = 56/70 (80.00%), Query Frame = 1
Query: 4 NWGITTFDNIGAAVLTIFQCITMEGWTNVLYMHMDGYSTWFSAIFFCTVVIVGSFFMINLLFAVMWEKFS 213
N+GIT+FD+IG A+LT+FQC+TMEGWTNVLY D +WF+ I+F ++I+GSFFM+NL+ V+ +F+
Sbjct: 343 NYGITSFDDIGYAMLTVFQCVTMEGWTNVLYYTNDAMGSWFNWIYFYPLIILGSFFMLNLVLGVLSGEFA 412
BLAST of mRNA_S-ischiensis_contig15.3795.1 vs. uniprot
Match: A0A6J8BGW3_MYTCO (CACNA1B n=2 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8BGW3_MYTCO) HSP 1 Score: 89.7 bits (221), Expect = 7.850e-19 Identity = 39/70 (55.71%), Postives = 56/70 (80.00%), Query Frame = 1
Query: 4 NWGITTFDNIGAAVLTIFQCITMEGWTNVLYMHMDGYSTWFSAIFFCTVVIVGSFFMINLLFAVMWEKFS 213
N+GIT+FD+IG A+LT+FQC+TMEGWTNVLY D +WF+ I+F ++I+GSFFM+NL+ V+ +F+
Sbjct: 506 NYGITSFDDIGYAMLTVFQCVTMEGWTNVLYYTNDAMGSWFNWIYFYPLIILGSFFMLNLVLGVLSGEFA 575
BLAST of mRNA_S-ischiensis_contig15.3795.1 vs. uniprot
Match: A0A8K0KAY6_LADFU (Uncharacterized protein n=1 Tax=Ladona fulva TaxID=123851 RepID=A0A8K0KAY6_LADFU) HSP 1 Score: 84.7 bits (208), Expect = 1.090e-18 Identity = 38/71 (53.52%), Postives = 55/71 (77.46%), Query Frame = 1
Query: 4 NWGITTFDNIGAAVLTIFQCITMEGWTNVLYMHMDGYSTWFSAIFFCTVVIVGSFFMINLLFAVMWEKFSS 216
N+GIT+FDNIG A+LT+FQCITMEGWT +LY D + F+ I+F ++++GSFFM+NL+ V+ +FS+
Sbjct: 56 NFGITSFDNIGFAMLTVFQCITMEGWTAILYWTNDALGSTFNWIYFVPLIVLGSFFMLNLVLGVLSGEFSN 126
BLAST of mRNA_S-ischiensis_contig15.3795.1 vs. uniprot
Match: UPI0008DC5D6F (voltage-dependent calcium channel type A subunit alpha-1 isoform X1 n=1 Tax=Bactrocera latifrons TaxID=174628 RepID=UPI0008DC5D6F) HSP 1 Score: 89.4 bits (220), Expect = 1.130e-18 Identity = 40/81 (49.38%), Postives = 60/81 (74.07%), Query Frame = 1
Query: 4 NWGITTFDNIGAAVLTIFQCITMEGWTNVLYMHMDGYSTWFSAIFFCTVVIVGSFFMINLLFAVMWEKFSSFQDMSDEVVE 246
NWGIT+FDNIG A+LT+FQCITMEGWT +LY D + F+ I+F ++++GSFFM+NL+ V+ +FS+ ++ + +E
Sbjct: 282 NWGITSFDNIGFAMLTVFQCITMEGWTAILYWTNDALGSAFNWIYFVPLIVIGSFFMLNLVLGVLSGEFSNERNRVERRME 362 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig15.3795.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig15.3795.1 >prot_S-ischiensis_contig15.3795.1 ID=prot_S-ischiensis_contig15.3795.1|Name=mRNA_S-ischiensis_contig15.3795.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=98bp LNWGITTFDNIGAAVLTIFQCITMEGWTNVLYMHMDGYSTWFSAIFFCTVback to top mRNA from alignment at S-ischiensis_contig15:2187008..2189891- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig15.3795.1 ID=mRNA_S-ischiensis_contig15.3795.1|Name=mRNA_S-ischiensis_contig15.3795.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=2884bp|location=Sequence derived from alignment at S-ischiensis_contig15:2187008..2189891- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig15:2187008..2189891- >mRNA_S-ischiensis_contig15.3795.1 ID=mRNA_S-ischiensis_contig15.3795.1|Name=mRNA_S-ischiensis_contig15.3795.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=588bp|location=Sequence derived from alignment at S-ischiensis_contig15:2187008..2189891- (Schizocladia ischiensis KU_0333)back to top |