mRNA_S-ischiensis_contig14.3279.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig14.3279.1 vs. uniprot
Match: D7FHR8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHR8_ECTSI) HSP 1 Score: 276 bits (707), Expect = 1.090e-85 Identity = 146/269 (54.28%), Postives = 186/269 (69.14%), Query Frame = 3
Query: 171 VSIIPGGADRFGELVINTGTTFVAKHPAISASWVLGLLVSILATGFAPSFEAQSRYETKLLNLDIDSLARAEEDVHAWSHAYQSSKGWLWSCDGVCQENRARLRESQRELDRLQREYDAGVAQAKSELGLFSQYGVEEARELFWGKGGGGKAFAKRATMYDAVFAGFSSM-RRDEGVASFLVKMVFRLVVNLTLGLFGAVVGFLFSVWKVIWSYQPDPMSSLAFFAAAGLAAVSLLATWLLGLAGATAGGVYVMAKAAEASMQIEAEQR 974
SI+ GGAD+FG LV++ V +HP IS SWV+GLLVS LA+G+ PS A YE K++ LD +S+ RA+ ++ W Y+ SKG W+C+ C NR ++ L + Y G A AKSELG+FS+ GVEE R+LFW K GGK FAKRATM+DA+F G +M RRDEG+AS + ++ FR VVNLT+GLF AV FLFS+W VIWSYQPDP+S+LAF A A L AVS+LATWLLGLA GVY +AK AE + QIEA ++
Sbjct: 11 TSIVVGGADQFGALVVSNAKQLVKRHPVISVSWVVGLLVSTLASGYTPSTTAMQNYENKMIGLDDESVMRAQGEMVYWDDIYRRSKGMFWTCNEQCTANRKEFERRRKTYLDLNKAYLKGEADAKSELGIFSEDGVEETRDLFWRKVSGGKQFAKRATMWDAMFVGIGTMTRRDEGLASIVARIAFRFVVNLTMGLFMAVFQFLFSMWTVIWSYQPDPLSTLAFAAMAALGAVSMLATWLLGLAAVGVTGVYTVAKLAE-TAQIEAARQ 278
BLAST of mRNA_S-ischiensis_contig14.3279.1 vs. uniprot
Match: A0A835Z0D4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0D4_9STRA) HSP 1 Score: 214 bits (544), Expect = 1.890e-61 Identity = 119/278 (42.81%), Postives = 174/278 (62.59%), Query Frame = 3
Query: 150 PQGGDGAVSIIPGGADRFGELVINT---GTTFVA-KHPAISASWVLGLLVSILATGFAPSFEAQSRYETKLLNLDI--DSLARAEEDVHAWSHAYQSSKGWLWSCDGVCQENRARLRESQRELDRLQREYDAGVAQAKSELGLFSQYGVEEARELFWGKGGGGKAFAKRATMYDAVFAGFSSMRRDEGVASFLVKMVFRLVVNLTLGLFGAVVGFLFSVWKVIWSYQPDPMSSLAFFAAAGLAAVSLLATWLLGLAGATAGGVYVMAKAAEASMQIEA 965
P +GAV++ R +L + T G VA +HP IS SWV GL ++I+ATGF P+ +A Y + +L + L +A+ + +W+ Y SKGW W CD CQEN +++ +L QR YD +A+AKS LG+FS GV EAR+LFW + GG+ FA+R+T+YDA+FAG SMRRD +A +++ M +++ N+++G GA+V FL+SVW VI ++QP + +L FF A LAA S++AT+ LGL A AG V M + A+A +EA
Sbjct: 4 PNQNNGAVAV------RLNDLTLTTVAKGAAGVAVRHPVISLSWVAGLFLAIMATGFTPAPQAMEAYSFAVEDLKFYENELLQAQYEYDSWNVEYHESKGWFWQCDDHCQENYKSFVQAREDLRGKQRSYDGKLAEAKSHLGIFSTLGVAEARDLFWRRVAGGREFARRSTLYDAIFAGIGSMRRDSSMAEYVMTMAVQVLWNMSIGAVGALVTFLWSVWGVIATFQPSAVVALLFFMCASLAAGSVIATFFLGLGAAGAGAVVGMVQLAKAQGTLEA 275
BLAST of mRNA_S-ischiensis_contig14.3279.1 vs. uniprot
Match: A0A2R5GIG8_9STRA (Uncharacterized protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GIG8_9STRA) HSP 1 Score: 202 bits (514), Expect = 5.430e-57 Identity = 112/284 (39.44%), Postives = 169/284 (59.51%), Query Frame = 3
Query: 129 AARSGGRPQGGDGAVSIIPGGADRFGELVINTGTTFVAKHPAISASWVLGLLVSILATGFAPSFEAQSRYETKLLNLDIDSLARAEEDVHAWSHAYQSSKGWLWSCDGVCQENRARLRESQRELDRLQREYDAGVAQAKSELGLFSQYGVEEARELFWGKGGGGKAFAKRATMYDAVFAGFSSMRRDEGVASFLVKMVFRLVVNLTLGLFGAVVGFLFSVWKVIWSYQPDPMSSLAFFAAAGLAAVSLLATWLLGLAGATAGGVYVMAKAAEASMQIEAEQRAA 980
AAR GG GGD IP F ++IN G F ++ + W+ GL++ + ATGF S + + Y L +D L A++ V+ W H Y SKGW SCD C EN LR +Q L +++E+ + ++AK +G+FS+YGV+E RELFW + GG+ FA+R++ YD +F SSM RDE + F ++++ +++N T+GL GA+VGF + +W V+ +YQP + ++ FF A +AA SL+A +L GL A AG V+V AK A S ++ + R A
Sbjct: 17 AARRGG-DAGGD-----IPD----FSMIMINGGVRFAKRNKVTTGMWIFGLVLVLFATGFQVSHQEEQTYNRILSKIDYKRLDAAQQQVYVWQHKYAQSKGWF-SCDEACHENYENLRAAQDNLYSIEKEFASISSEAKQTVGIFSEYGVQEVRELFWSQFAGGREFAQRSSWYDFIFMSISSMGRDESLVEFGLRLIVNMLLNFTIGLIGALVGFYYYLWGVVAAYQPSFLLAVGFFFLASVAATSLVAAYLAGLYSAAAGTVFVAAKIATQSARLNDDARRA 289
BLAST of mRNA_S-ischiensis_contig14.3279.1 vs. uniprot
Match: A0A7S2VYJ2_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2VYJ2_9STRA) HSP 1 Score: 196 bits (499), Expect = 6.280e-55 Identity = 104/275 (37.82%), Postives = 174/275 (63.27%), Query Frame = 3
Query: 153 QGGDGAVSIIPGGADRFGELVINTGTTFVAKHPAISASWVLGLLVSIL-ATGFAPSFEAQSRYETKLLNLDIDSLARAEEDVHAWSHAYQSSKGWLWSCDGVCQENRARLRESQRELDRLQREYDAGVAQAKSELGLFSQYGVEEARELFWGKGGGGKAFAKRATMYDAVFAGFSSMRRDEGVASFLVKMVFRLVVNLTLGLFGAVVGFLFSVWKVIWSYQPDPMSSLAFFAAAGLAAVSLLATWLLGLAGATAGGVYVMAKAAEASMQIEAEQR 974
QGG ++IP D G +V+ T F KH IS S++LG+LV ++ TG + + + +Y + + +D+ + A + +HAYQSSKGW +CDG+CQ N+ R+ +++LD ++ E +A ++ AKS+ GLFS+ GV E ++ FW GK FAKR +M+DA+F G SM RDE + + +K++ ++++N +LGL GA+ F++ +W ++ SYQPDP+++ AFF A A + ++T+L + GA AG VY +AK E++ +++ +R
Sbjct: 5 QGGYPQRAVIPNAGD-MGSIVVRGVTNFARKHKVISGSYILGVLVLLIFTTGTKLTLQQRQQYNSIMNTIDLKAEYDASDRYGRAAHAYQSSKGWF-TCDGLCQRNKRRMEAVKQDLDEVRAEGNARMSDAKSKAGLFSEVGVAEVKDSFWDYFHKGKQFAKRRSMWDALFMGMRSMGRDENILEYCLKLLLQVLINFSLGLIGALFIFVWGLWTIVNSYQPDPLTAAAFFVGATCAGFAFVSTYLFLIYGAAAGSVYGLAKVVESNARLQNGRR 277
BLAST of mRNA_S-ischiensis_contig14.3279.1 vs. uniprot
Match: A0A7S1IGG2_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IGG2_9EUGL) HSP 1 Score: 197 bits (500), Expect = 2.000e-54 Identity = 99/258 (38.37%), Postives = 166/258 (64.34%), Query Frame = 3
Query: 201 FGELVINTGTTFVAKHPAISASWVLGLLVSILATGFAPSFEAQSRYETKLLNLDIDSLARAEEDVHAWSHAYQSSKGWLWSCDGVCQENRARLRESQRELDRLQREYDAGVAQAKSELGLFSQYGVEEARELFWGKGGGGKAFAKRATMYDAVFAGFSSMRRDEGVASFLVKMVFRLVVNLTLGLFGAVVGFLFSVWKVIWSYQPDPMSSLAFFAAAGLAAVSLLATWLLGLAGATAGGVYVMAKAAEASMQIEAEQR 974
G ++++ + ++ IS +WV+GLL++ ATGFA S + + +YE+ + +++ + L AE+ + Y+S KGW W+CD +C + + + ++L+ Q + ++ AK E+G+FS YGVEE R LFW G GK FAKR +M+D +F G RD+G+A++L+K++ ++++N TLGL GA +GF++S+W V+ S+QP L FF A +AA + +A+WL+GL A AGGV V+ KAA S+ ++ ++R
Sbjct: 84 LGSVMLSGAVSVAKRNWKISLTWVVGLLLASFATGFAVSEDQRVKYESMMQDINTEPLMAAEDAAYRVRGLYESHKGWFWTCDALCTQYKTEYEAAAKQLEHEQSIVNRQISDAKGEVGIFSTYGVEETRRLFWKSFGQGKDFAKRQSMWDLLFLGVGR-GRDDGLAAYLIKLLLQVLLNFTLGLIGATIGFIWSLWGVVSSFQPGIAERLLFFGLASVAACAFMASWLIGLYTAAAGGVVVLGKAAH-SLALQDQER 339
BLAST of mRNA_S-ischiensis_contig14.3279.1 vs. uniprot
Match: A0A1E7FAB6_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FAB6_9STRA) HSP 1 Score: 194 bits (493), Expect = 6.270e-54 Identity = 107/289 (37.02%), Postives = 179/289 (61.94%), Query Frame = 3
Query: 135 RSGGRPQGGDGAVSIIPGGADRFGELVINTGTTFVAKHPAISASWVLGLLVSILATGFAP-SFEAQSRYETKLLNLDIDSLARAEEDVHAWSHAYQSSKGWLWSCDGVCQENRARLRESQRELDRLQREYDAGVAQAKSELGLFSQYGVEEARELFWGKGGGGKAFAKRATMYDAVFAGFSSMRRDEGVASFLVKMVFRLVVNLTLGLFGAVVGFLFSVWKVIWSYQPDPMSSLAFFAAAGLAAVSLLATWLLGLAGATAGGVYVMAKAAEASMQIEAEQRAAGGRGGR 998
R GG P V ++P AD G+++I + F +H I+ +VLG+LV IL G + +++ + Y + +D+++ A D A + Y+++KGW SCDG+CQ N+ ++ +++ LDR++ E + ++ AK+ GLFS+ GV E ++ FW GK FAKR +M+DA+F G SM RDE + + +K++ ++++N ++GL A+V F+ +W ++ SYQP+P+ ++AFF +A AA S + T+L + GA AGGVY + K AE ++QI+ + G RGGR
Sbjct: 7 RGGGPPGQAGRQVIVLPEPAD-VGKIIIRGASDFAKQHKVITGGYVLGILVIILIGGGSKLNYDQRREYNNIMNTIDVEAEYAASNDFFAANQNYRATKGWF-SCDGLCQRNKRKMDDAKIRLDRIREEGNVRMSDAKNVAGLFSEIGVGEVQDAFWSYFSAGKKFAKRQSMWDAMFMGIRSMGRDENMVEYGMKVLMQVLLNFSIGLVMALVMFVVGLWSIVRSYQPNPIVAVAFFVSASCAAFSFVTTYLFAIYGAAAGGVYGVLKIAEGNLQIQQQ----GNRGGR 289
BLAST of mRNA_S-ischiensis_contig14.3279.1 vs. uniprot
Match: A0A7S2A693_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A693_TRICV) HSP 1 Score: 190 bits (482), Expect = 1.630e-52 Identity = 104/263 (39.54%), Postives = 165/263 (62.74%), Query Frame = 3
Query: 189 GADRFGELVINTGTTFVAKHPAISASWVLGLLVSILA-TGFAPSFEAQSRYETKLLNLDIDSLARAEEDVHAWSHAYQSSKGWLWSCDGVCQENRARLRESQRELDRLQREYDAGVAQAKSELGLFSQYGVEEARELFWGKGGGGKAFAKRATMYDAVFAGFSSMRRDEGVASFLVKMVFRLVVNLTLGLFGAVVGFLFSVWKVIWSYQPDPMSSLAFFAAAGLAAVSLLATWLLGLAGATAGGVYVMAKAAEASMQIEAEQR 974
G G L + F +H IS S+V GLLV +L +G + + + +Y+ + +D+++ A HAY++SKGW SCD +CQ N+AR+ +++ L+ ++ E ++ AK GLFS+ GV E ++ FW + GK FAKR +M+DA+F G SM RDE A + +KM+ ++++N ++GL A+ F+F +W ++ SYQPDP+++LAFF +A AA + + T+LL + GATAGG+Y MAK AE +M+IE +R
Sbjct: 14 GQGDIGTLALRGAAAFAKRHKVISGSYVFGLLVLLLVGSGTKLTLDQRRQYDHIMSTIDLNAEFDASNRYAHAMHAYRASKGWF-SCDSLCQRNKARMEDARAALEDIRAEGYNRMSDAKRVAGLFSEVGVGEVKDSFWERFHAGKRFAKRQSMWDAMFMGMRSMGRDESFAEYALKMIVQVLINFSIGLVMALFIFIFGLWGIVRSYQPDPLTALAFFLSAVCAAFAFVTTYLLLIYGATAGGLYGMAKMAETNMRIEQGRR 275
BLAST of mRNA_S-ischiensis_contig14.3279.1 vs. uniprot
Match: A0A7S0C9V1_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C9V1_9STRA) HSP 1 Score: 189 bits (481), Expect = 3.490e-52 Identity = 98/268 (36.57%), Postives = 169/268 (63.06%), Query Frame = 3
Query: 162 DGAVSIIPGGADRFGELVINTGTTFVAKHPAISASWVLGLLVSILA-TGFAPSFEAQSRYETKLLNLDIDSLARAEEDVHAWSHAYQSSKGWLWSCDGVCQENRARLRESQRELDRLQREYDAGVAQAKSELGLFSQYGVEEARELFWGKGGGGKAFAKRATMYDAVFAGFSSMRRDEGVASFLVKMVFRLVVNLTLGLFGAVVGFLFSVWKVIWSYQPDPMSSLAFFAAAGLAAVSLLATWLLGLAGATAGGVYVMAKAAEASMQIE 962
DG +IP +D FG L ++ F ++ I+ S++ GL++ +L +G+ S E +Y + +D+ + A + + AY+++KGW +SCD +CQ N++R+ ++R+L ++ E ++ AK+ G+FS+ GV E ++ FW GK FAKR TM+DA+F G SM RDE + +++K++ ++N +LGL A+ F+F +W ++ SYQPDP++++AFF +A AA + ++T+L + GA AG VY +AK AEA+M+I+
Sbjct: 17 DGQRIVIPNSSD-FGALAVSGVKAFAKRNKVITGSYLFGLIIVVLGGSGYQLSREQSIQYNQIMSTIDLKAEYDASNKYASANQAYRATKGWFFSCDSLCQRNKSRMEHAKRDLGMIRAEGYNRMSDAKASAGIFSEVGVGEVKDSFWEYFQSGKQFAKRQTMWDALFTGMRSMGRDESMMEYVLKVLMNALINFSLGLIMALFIFIFGLWSIVKSYQPDPLTAVAFFLSASCAAFAFVSTFLFFMYGAAAGSVYGVAKLAEANMRID 283
BLAST of mRNA_S-ischiensis_contig14.3279.1 vs. uniprot
Match: A0A7S1G116_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1G116_9STRA) HSP 1 Score: 188 bits (477), Expect = 1.000e-51 Identity = 108/277 (38.99%), Postives = 173/277 (62.45%), Query Frame = 3
Query: 147 RPQGGDGAVSIIPGGADRFGELVINTGTTFVAKHPAISASWVLGLLVSI-LATGFAPSFEAQSRYETKLLNLDIDSLARAEEDVHAWSHAYQSSKGWLWSCDGVCQENRARLRESQRELDRLQREYDAGVAQAKSELGLFSQYGVEEARELFWGKGGGGKAFAKRATMYDAVFAGFSSMRR--DEGVASFLVKMVFRLVVNLTLGLFGAVVGFLFSVWKVIWSYQPDPMSSLAFFAAAGLAAVSLLATWLLGLAGATAGGVYVMAKAAEASMQIEAE 968
R GG A + +P G LV+ +F +P I+++++ G++V + + TG +F+ Q++Y+ + +D+D+ A A ++AY SKGW SCD CQ N+ R+ S++E+D ++ E +A ++ AK GLFS+ G+ E ++ FW GK FAKR TM+DA+F G SM R DE + F +K++ +L++N +LGL A+ F+F +W +I SYQP PM ++ FF A AA + +AT+LL L GA AGGVY +A+ A+A+M+++AE
Sbjct: 5 RQPGGTIANASMP----PMGPLVVQGVKSFAKHNPIITSTYLFGIVVLLTVGTGTKLTFDQQNQYDRIMSTIDLDAEYDAASRYAAANNAYYHSKGWF-SCDSYCQRNKKRMENSKKEVDAVRAEGNARMSDAKKVAGLFSEVGIGEVKDSFWALFNQGKRFAKRQTMWDALFVGMRSMSRGRDESIIEFGLKILLQLLINFSLGLLMALFLFVFGLWTIIKSYQPSPMMAVLFFVMATSAAFAFVATFLLALYGAAAGGVYSVAQLAQANMRLQAE 276
BLAST of mRNA_S-ischiensis_contig14.3279.1 vs. uniprot
Match: A0A7S2WRM9_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WRM9_9STRA) HSP 1 Score: 187 bits (475), Expect = 1.950e-51 Identity = 96/260 (36.92%), Postives = 157/260 (60.38%), Query Frame = 3
Query: 195 DRFGELVINTGTTFVAKHPAISASWVLGLLVSILATGFAPSFEAQSRYETKLLNLDIDSLARAEEDVHAWSHAYQSSKGWLWSCDGVCQENRARLRESQRELDRLQREYDAGVAQAKSELGLFSQYGVEEARELFWGKGGGGKAFAKRATMYDAVFAGFSSMRRDEGVASFLVKMVFRLVVNLTLGLFGAVVGFLFSVWKVIWSYQPDPMSSLAFFAAAGLAAVSLLATWLLGLAGATAGGVYVMAKAAEASMQIEAEQR 974
D +I G F +H +++++++G+++ + A GFA S E + +YE L +D+ + RA+ + Y+ SKGW SCD C N + + L +++E+ ++AKS +G+FS+YGV+E R+LFW + GGK FAKR++ +D +F SM RDE + F ++ + +++N T+GL GA++GF + VW +I SYQP + + FF A +AA S + ++LLGL A AG VYV AK A S +++ +QR
Sbjct: 18 DDVSTALIRHGVAFAKRHYVMTSAYIVGVVIMLFAGGFAVSMEQEQKYERILSQIDLKRMHRAQVAAQNAEYNYRESKGWF-SCDNHCMANYEEYQLNLARLAEVEKEFAEIQSEAKSVVGVFSEYGVQEVRDLFWSQFAGGKDFAKRSSWWDLIFMSIGSMGRDESLMEFALRFLMNMLMNFTIGLVGALIGFYWFVWGIITSYQPSVLIAFVFFMLASIAATSCVVSFLLGLYSAAAGSVYVAAKIASNSARLQDQQR 276 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig14.3279.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig14.3279.1 >prot_S-ischiensis_contig14.3279.1 ID=prot_S-ischiensis_contig14.3279.1|Name=mRNA_S-ischiensis_contig14.3279.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=328bp MAARSGGRPQGGDGAVSIIPGGADRFGELVINTGTTFVAKHPAISASWVLback to top mRNA from alignment at S-ischiensis_contig14:1248854..1257032+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig14.3279.1 ID=mRNA_S-ischiensis_contig14.3279.1|Name=mRNA_S-ischiensis_contig14.3279.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=8179bp|location=Sequence derived from alignment at S-ischiensis_contig14:1248854..1257032+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig14:1248854..1257032+ >mRNA_S-ischiensis_contig14.3279.1 ID=mRNA_S-ischiensis_contig14.3279.1|Name=mRNA_S-ischiensis_contig14.3279.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1968bp|location=Sequence derived from alignment at S-ischiensis_contig14:1248854..1257032+ (Schizocladia ischiensis KU_0333)back to top |