mRNA_S-ischiensis_contig122.2810.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig122.2810.1 vs. uniprot
Match: A0A7S6UA16_9STRA (Nad9 n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6UA16_9STRA) HSP 1 Score: 342 bits (878), Expect = 2.760e-117 Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 1
Query: 4 IQLINSQVVLTVDPSHLIQVLVFLRDHTQCQYKVLSAISGVDYPERENRFEVSYELLSVSLNTRLRLKTYVNEVTALDSAVEVYSNANWWEREVWDLFGVFFRGHPDLRRILTDYGFVGHPLRKDFPLSGYVELRYDENQKRVVCESLEFSQEFRAFQFHTPWKTA 501
IQLINSQVVLTVDPSHLIQVLVFLRDHTQCQYKVLSAISGVDYPERENRFEVSYELLSVSLNTRLRLKTYVNEVTALDSAVEVYSNANWWEREVWDLFGVFFRGHPDLRRILTDYGFVGHPLRKDFPLSGYVELRYDENQKRVVCESLEFSQEFRAFQFHTPWKTA
Sbjct: 22 IQLINSQVVLTVDPSHLIQVLVFLRDHTQCQYKVLSAISGVDYPERENRFEVSYELLSVSLNTRLRLKTYVNEVTALDSAVEVYSNANWWEREVWDLFGVFFRGHPDLRRILTDYGFVGHPLRKDFPLSGYVELRYDENQKRVVCESLEFSQEFRAFQFHTPWKTA 187
BLAST of mRNA_S-ischiensis_contig122.2810.1 vs. uniprot
Match: A0A649UBS3_AURAN (NADH dehydrogenase subunit 9 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=A0A649UBS3_AURAN) HSP 1 Score: 259 bits (661), Expect = 4.910e-84 Identity = 115/166 (69.28%), Postives = 141/166 (84.94%), Query Frame = 1
Query: 4 IQLINSQVVLTVDPSHLIQVLVFLRDHTQCQYKVLSAISGVDYPERENRFEVSYELLSVSLNTRLRLKTYVNEVTALDSAVEVYSNANWWEREVWDLFGVFFRGHPDLRRILTDYGFVGHPLRKDFPLSGYVELRYDENQKRVVCESLEFSQEFRAFQFHTPWKTA 501
+Q++N++V+ TV P H++ VL FLRDH CQYKVLSA++G DYPER +RFEVSY+LLSV N RLR+KT +NEV +LDSA +VYS+A+WWEREVWD+FGVFF GHPDLRRILTDYGF G+PLRKDFPLSGYVE+RYD+ KRVVCE LE +QEFR+F F +PW +
Sbjct: 24 VQVLNNEVICTVQPQHIVFVLTFLRDHVNCQYKVLSALTGTDYPERVDRFEVSYDLLSVKFNNRLRIKTSINEVGSLDSATKVYSSADWWEREVWDMFGVFFSGHPDLRRILTDYGFEGYPLRKDFPLSGYVEVRYDDTVKRVVCEPLELAQEFRSFNFESPWSKS 189
BLAST of mRNA_S-ischiensis_contig122.2810.1 vs. uniprot
Match: A0A7U0QGG2_9STRA (NADH dehydrogenase subunit 9 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7U0QGG2_9STRA) HSP 1 Score: 249 bits (636), Expect = 3.050e-80 Identity = 108/166 (65.06%), Postives = 140/166 (84.34%), Query Frame = 1
Query: 4 IQLINSQVVLTVDPSHLIQVLVFLRDHTQCQYKVLSAISGVDYPERENRFEVSYELLSVSLNTRLRLKTYVNEVTALDSAVEVYSNANWWEREVWDLFGVFFRGHPDLRRILTDYGFVGHPLRKDFPLSGYVELRYDENQKRVVCESLEFSQEFRAFQFHTPWKTA 501
+Q++N++V+ TV P ++ VL FLRDH CQYKVLSAI+G DYPER +RFE+SYELLS+ N+RLR+KT +NEV +++SA +++++ANWWEREVWD+FG+FF HPDLRRILTDYGF G+PLRKDFPLSGYVE+RYD+ KRVVCE LE +QEFR+F F +PW +
Sbjct: 24 VQVLNNEVICTVHPQYIPFVLTFLRDHVNCQYKVLSAITGTDYPERSDRFEISYELLSIKFNSRLRVKTSINEVGSVESATKIFNSANWWEREVWDMFGIFFSNHPDLRRILTDYGFEGYPLRKDFPLSGYVEVRYDDTVKRVVCEPLELAQEFRSFNFESPWSKS 189
BLAST of mRNA_S-ischiensis_contig122.2810.1 vs. uniprot
Match: A0A0K2RWJ9_9STRA (NADH dehydrogenase subunit 9 n=1 Tax=Triparma laevis TaxID=1534972 RepID=A0A0K2RWJ9_9STRA) HSP 1 Score: 239 bits (609), Expect = 2.630e-76 Identity = 107/160 (66.88%), Postives = 133/160 (83.12%), Query Frame = 1
Query: 16 NSQVVLTVDPSHLIQVLVFLRDHTQCQYKVLSAISGVDYPERENRFEVSYELLSVSLNTRLRLKTYVNEVTALDSAVEVYSNANWWEREVWDLFGVFFRGHPDLRRILTDYGFVGHPLRKDFPLSGYVELRYDENQKRVVCESLEFSQEFRAFQFHTPWK 495
S+++LTV P HLI L FL++ T QYK+L+ ISGVDYP R +RFEV YELLS++ N+R+R+KT+V E+ ++DSAV +Y A+WWERE+WDLFGVFF+ HPDLRRILTDYGF GHPLRKDFPLSGYVE+RYDE +KRVVCE L F+QEFR F F++PW
Sbjct: 31 GSELILTVSPKHLISTLFFLKNSTAHQYKLLTCISGVDYPGRTDRFEVVYELLSLTFNSRIRVKTHVGEINSVDSAVALYPAADWWEREIWDLFGVFFKNHPDLRRILTDYGFEGHPLRKDFPLSGYVEVRYDERKKRVVCEPLSFAQEFRNFDFNSPWN 190
BLAST of mRNA_S-ischiensis_contig122.2810.1 vs. uniprot
Match: A0A140F2X6_9STRA (NADH dehydrogenase subunit 9 n=1 Tax=Monodopsis sp. MarTras21 TaxID=1745953 RepID=A0A140F2X6_9STRA) HSP 1 Score: 235 bits (600), Expect = 5.710e-75 Identity = 106/165 (64.24%), Postives = 135/165 (81.82%), Query Frame = 1
Query: 7 QLINSQVVLTVDPSHLIQVLVFLRDHTQCQYKVLSAISGVDYPERENRFEVSYELLSVSLNTRLRLKTYVNEVTALDSAVEVYSNANWWEREVWDLFGVFFRGHPDLRRILTDYGFVGHPLRKDFPLSGYVELRYDENQKRVVCESLEFSQEFRAFQFHTPWKTA 501
++++++++LTV P +LI V+ FL+ + CQ+ L+AISG DYPERENRFEV+YELLSV N R+R+KT+VNEVT L+S +Y ANWWERE+WDLFGVFF+ HPDLRRILTDYGF GHPLRKDFPLSGYVE+ YDE KRV+ + LE +QEFR+F F +PW T+
Sbjct: 20 KILDNEIILTVHPKNLIGVITFLKHNVLCQFICLTAISGTDYPERENRFEVAYELLSVYHNRRVRVKTFVNEVTPLNSITLLYRAANWWEREIWDLFGVFFKDHPDLRRILTDYGFQGHPLRKDFPLSGYVEVSYDEKLKRVISQPLELTQEFRSFDFRSPWSTS 184
BLAST of mRNA_S-ischiensis_contig122.2810.1 vs. uniprot
Match: A0A4Y5T7L5_9PHAE (NADH dehydrogenase subunit 9 n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A4Y5T7L5_9PHAE) HSP 1 Score: 234 bits (596), Expect = 2.230e-74 Identity = 108/164 (65.85%), Postives = 133/164 (81.10%), Query Frame = 1
Query: 7 QLINSQVVLTVDPSHLIQVLVFLRDHTQCQYKVLSAISGVDYPERENRFEVSYELLSVSLNTRLRLKTYVNEVTALDSAVEVYSNANWWEREVWDLFGVFFRGHPDLRRILTDYGFVGHPLRKDFPLSGYVELRYDENQKRVVCESLEFSQEFRAFQFHTPWKT 498
+++N ++V++V +L+ VL FL HT +++L+ ISGVDYPERE+RFEV YELLS+S N+RLR+KTY NEVT L S V ++ ANWWERE+WDLFGVFF HPDLRRILTDYGF GHPLRKDFPLSG+ ELRYDE+Q+ VVCES+E +QEFRAF F TPW
Sbjct: 26 RVVNQEMVISVPKEYLLFVLTFLHHHTNGFFQLLTCISGVDYPEREDRFEVVYELLSISHNSRLRVKTYTNEVTPLFSVVNLFPCANWWEREIWDLFGVFFYTHPDLRRILTDYGFEGHPLRKDFPLSGFFELRYDEDQRVVVCESIELTQEFRAFNFSTPWSN 189
BLAST of mRNA_S-ischiensis_contig122.2810.1 vs. uniprot
Match: A0A8F0FDI1_9PHAE (NADH dehydrogenase subunit 9 n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0FDI1_9PHAE) HSP 1 Score: 230 bits (587), Expect = 5.170e-73 Identity = 100/163 (61.35%), Postives = 131/163 (80.37%), Query Frame = 1
Query: 7 QLINSQVVLTVDPSHLIQVLVFLRDHTQCQYKVLSAISGVDYPERENRFEVSYELLSVSLNTRLRLKTYVNEVTALDSAVEVYSNANWWEREVWDLFGVFFRGHPDLRRILTDYGFVGHPLRKDFPLSGYVELRYDENQKRVVCESLEFSQEFRAFQFHTPWK 495
Q+ ++V++V +L+ L+FL H+ Y++L++ISGVDYPERE RFE+ Y+LL++ N+RLR+KTY +E+ L S V ++ +ANWWERE+WDLFGVFF HPDLRRILTDYGF GHPLRKDFPLSGY ELRYDE+Q+ VVCE++E +QEFR+F FHTPW
Sbjct: 22 QVFGHEIVISVSKKYLLATLIFLHHHSNGNYQLLTSISGVDYPEREERFEIVYDLLNLRSNSRLRVKTYTDEINPLPSVVSLFPSANWWEREIWDLFGVFFSDHPDLRRILTDYGFEGHPLRKDFPLSGYFELRYDEDQRVVVCEAIELTQEFRSFDFHTPWS 184
BLAST of mRNA_S-ischiensis_contig122.2810.1 vs. uniprot
Match: D2Z200_9STRA (NADH dehydrogenase subunit 9 n=1 Tax=Chattonella marina TaxID=90936 RepID=D2Z200_9STRA) HSP 1 Score: 229 bits (585), Expect = 9.100e-73 Identity = 104/165 (63.03%), Postives = 135/165 (81.82%), Query Frame = 1
Query: 7 QLINSQVVLTVDPSHLIQVLVFLRDHTQCQYKVLSAISGVDYPERENRFEVSYELLSVSLNTRLRLKTYVNEVTALDSAVEVYSNANWWEREVWDLFGVFFRGHPDLRRILTDYGFVGHPLRKDFPLSGYVELRYDENQKRVVCESL-EFSQEFRAFQFHTPWKT 498
+L ++V+++V +L++ + FL+ HTQ QYK+L++ISGVDYP+ + RFE+ Y+LL++ N RLR+KTYV+EVT L S + V+ +NWWEREVWDLFGVFF HPDLRRILTDYGF GHPLRK+FPLSGYVE+RYDE+QKRVVCE + + SQEFR+F F TPWK
Sbjct: 22 KLFKNEVIISVPSKYLLESIYFLKFHTQSQYKILTSISGVDYPQYQQRFEIVYDLLTLVYNNRLRVKTYVDEVTPLPSIISVFPCSNWWEREVWDLFGVFFLNHPDLRRILTDYGFEGHPLRKNFPLSGYVEVRYDESQKRVVCEPIKQLSQEFRSFNFPTPWKN 186
BLAST of mRNA_S-ischiensis_contig122.2810.1 vs. uniprot
Match: A0A140F2P7_9STRA (NADH dehydrogenase subunit 9 n=1 Tax=Trachydiscus minutus TaxID=1032745 RepID=A0A140F2P7_9STRA) HSP 1 Score: 229 bits (585), Expect = 1.110e-72 Identity = 98/165 (59.39%), Postives = 128/165 (77.58%), Query Frame = 1
Query: 7 QLINSQVVLTVDPSHLIQVLVFLRDHTQCQYKVLSAISGVDYPERENRFEVSYELLSVSLNTRLRLKTYVNEVTALDSAVEVYSNANWWEREVWDLFGVFFRGHPDLRRILTDYGFVGHPLRKDFPLSGYVELRYDENQKRVVCESLEFSQEFRAFQFHTPWKTA 501
+L+ ++++ V P +L V+ F ++H CQY L+AISG DYPERENRFEV+YELLS N R+R+KT+VNE T + S +Y ANWWERE+WDL+GVFF+ HPDLRR+LTDYGF GHP+RKDFPLSGYVE+ YDE KRV+ + LE +QEFR+F F +PW ++
Sbjct: 20 KLLGDEIIIVVHPKNLYNVINFFKNHVLCQYNCLAAISGTDYPERENRFEVAYELLSTHYNRRIRVKTFVNEFTPISSVTAIYPAANWWEREIWDLYGVFFQNHPDLRRLLTDYGFQGHPMRKDFPLSGYVEVSYDEKLKRVITQPLELTQEFRSFDFRSPWSSS 184
BLAST of mRNA_S-ischiensis_contig122.2810.1 vs. uniprot
Match: Q2TUA8_DICDH (NADH dehydrogenase subunit 9 n=1 Tax=Dictyota dichotoma TaxID=2876 RepID=Q2TUA8_DICDH) HSP 1 Score: 229 bits (583), Expect = 2.230e-72 Identity = 103/161 (63.98%), Postives = 126/161 (78.26%), Query Frame = 1
Query: 16 NSQVVLTVDPSHLIQVLVFLRDHTQCQYKVLSAISGVDYPERENRFEVSYELLSVSLNTRLRLKTYVNEVTALDSAVEVYSNANWWEREVWDLFGVFFRGHPDLRRILTDYGFVGHPLRKDFPLSGYVELRYDENQKRVVCESLEFSQEFRAFQFHTPWKT 498
++V++V HL+ VL+FL HT +++L+ +SGVDYPERENRFE+ YELLS+ N R+R+KTY NEV + S V ++ ANWWERE+WDLFGVFF HPDLRRILTDYGF GHPLRKDFPLSG+VELRYDE+Q+ VVCE +E SQEFR F F TPW
Sbjct: 29 GQEMVISVSKEHLLVVLIFLHHHTNGGFQLLTCVSGVDYPERENRFEIVYELLSLGYNCRIRVKTYTNEVNPVFSCVSLFPCANWWEREIWDLFGVFFFTHPDLRRILTDYGFEGHPLRKDFPLSGFVELRYDEDQRVVVCEPIELSQEFRMFSFSTPWSN 189 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig122.2810.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig122.2810.1 >prot_S-ischiensis_contig122.2810.1 ID=prot_S-ischiensis_contig122.2810.1|Name=mRNA_S-ischiensis_contig122.2810.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=168bp KIQLINSQVVLTVDPSHLIQVLVFLRDHTQCQYKVLSAISGVDYPERENRback to top mRNA from alignment at S-ischiensis_contig122:7537..8339+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig122.2810.1 ID=mRNA_S-ischiensis_contig122.2810.1|Name=mRNA_S-ischiensis_contig122.2810.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=803bp|location=Sequence derived from alignment at S-ischiensis_contig122:7537..8339+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig122:7537..8339+ >mRNA_S-ischiensis_contig122.2810.1 ID=mRNA_S-ischiensis_contig122.2810.1|Name=mRNA_S-ischiensis_contig122.2810.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1008bp|location=Sequence derived from alignment at S-ischiensis_contig122:7537..8339+ (Schizocladia ischiensis KU_0333)back to top |