mRNA_S-ischiensis_contig12.2608.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig12.2608.1
Unique NamemRNA_S-ischiensis_contig12.2608.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
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BLAST of mRNA_S-ischiensis_contig12.2608.1 vs. uniprot
Match: D7FGR6_ECTSI (NDK domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FGR6_ECTSI)

HSP 1 Score: 305 bits (782), Expect = 7.630e-103
Identity = 142/162 (87.65%), Postives = 153/162 (94.44%), Query Frame = 1 
Query:  148 SFPHTGVPGTDNERSFIAIKPDGVQRQLVGEVISRFERKGYKLVAMKMIWPTEKMAGEHYADLSKKPFFAGLVKYFSSGPIVAMVWEGPDVILTGRKMLGATNPNASEPGSLRGDYCIRVGRNLIHGSDGPESAKHEIGMWFTESECSAWPRTLDAWLTADN 633
            +F +TG PGT +ERSFIAIKPDGVQRQLVGEVISRFE+KGYKLVAMKMIWPT++MA  HYADLSKKPFF+GLV YFSSGPIVAMVWEGP+VILTGRKMLGATNPN+SEPGSLRGDYCIRVGRNLIHGSDG ESA+HEIGMWFTE ECSAWPRTLDAW+ ADN
Sbjct:   76 AFKYTGEPGTAHERSFIAIKPDGVQRQLVGEVISRFEKKGYKLVAMKMIWPTKEMAANHYADLSKKPFFSGLVDYFSSGPIVAMVWEGPEVILTGRKMLGATNPNSSEPGSLRGDYCIRVGRNLIHGSDGGESAQHEIGMWFTEEECSAWPRTLDAWIVADN 237
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BLAST of mRNA_S-ischiensis_contig12.2608.1 vs. uniprot
Match: A0A835YSZ5_9STRA (Nucleoside diphosphate kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSZ5_9STRA)

HSP 1 Score: 270 bits (690), Expect = 4.660e-89
Identity = 123/163 (75.46%), Postives = 142/163 (87.12%), Query Frame = 1 
Query:  145 ASFPHTGVPGTDNERSFIAIKPDGVQRQLVGEVISRFERKGYKLVAMKMIWPTEKMAGEHYADLSKKPFFAGLVKYFSSGPIVAMVWEGPDVILTGRKMLGATNPNASEPGSLRGDYCIRVGRNLIHGSDGPESAKHEIGMWFTESECSAWPRTLDAWLTADN 633
            A+FP+TGV GT NERSFIAIKPDGVQR L+ EVISRFE+KGYKLVAMKMIW TE+MA  HY DL  +PFF  LVKYF+SGPIVAMVWEGPDVI TGRK+LGATNP A++ G+LRGD+C+  GRN+IHGSDGPESA HEIGMWFTE ECSA+ R++D+W+ ADN
Sbjct:   61 AAFPYTGVAGTGNERSFIAIKPDGVQRGLIAEVISRFEKKGYKLVAMKMIWATEEMAANHYDDLKGRPFFPALVKYFASGPIVAMVWEGPDVIKTGRKILGATNPQAADVGTLRGDFCLTTGRNIIHGSDGPESAAHEIGMWFTEKECSAYSRSIDSWIVADN 223
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BLAST of mRNA_S-ischiensis_contig12.2608.1 vs. uniprot
Match: A0A7S2XZK8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZK8_9STRA)

HSP 1 Score: 261 bits (667), Expect = 1.370e-85
Identity = 125/187 (66.84%), Postives = 151/187 (80.75%), Query Frame = 1 
Query:   73 LGAAATAGLVAAVAGGERSLPACKASFPHTGVPGTDNERSFIAIKPDGVQRQLVGEVISRFERKGYKLVAMKMIWPTEKMAGEHYADLSKKPFFAGLVKYFSSGPIVAMVWEGPDVILTGRKMLGATNPNASEPGSLRGDYCIRVGRNLIHGSDGPESAKHEIGMWFTESECSAWPRTLDAWLTADN 633
            +GAA  A LVA    G  ++ AC+ S P+TG+PGT +ER+FIA+KPDGVQR LVGE+I+RFE+KGYKLVAMK+IW TE+    HY+DL+ +PFF GLVKYFSSGPIV MVWEGPD + TGRKMLGATNP AS+PG++RGD+C+ VGRNLIHGSD  +SA+ EI  WFT  EC  WPRTLDAW+T DN
Sbjct:   38 IGAAGFASLVAGA--GLTTVAACE-SVPYTGLPGTAHERTFIAVKPDGVQRGLVGEIIARFEKKGYKLVAMKLIWATEEKTKAHYSDLAARPFFGGLVKYFSSGPIVGMVWEGPDAVKTGRKMLGATNPLASDPGTIRGDFCVVVGRNLIHGSDATDSAEKEIANWFTPEECYDWPRTLDAWITEDN 221
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BLAST of mRNA_S-ischiensis_contig12.2608.1 vs. uniprot
Match: A0A6G0XYC2_9STRA (Nucleoside diphosphate kinase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XYC2_9STRA)

HSP 1 Score: 258 bits (659), Expect = 2.250e-84
Identity = 124/186 (66.67%), Postives = 148/186 (79.57%), Query Frame = 1 
Query:   79 AAATAGLVAAVA-GGERSLPACKASFPHTGVPGTDNERSFIAIKPDGVQRQLVGEVISRFERKGYKLVAMKMIWPTEKMAGEHYADLSKKPFFAGLVKYFSSGPIVAMVWEGPDVILTGRKMLGATNPNASEPGSLRGDYCIRVGRNLIHGSDGPESAKHEIGMWFTESECSAWPRTLDAWLTADN 633
            AA  +G+ A +A G      A K   P+TG+PGT NER+FIAIKPDGV+R L+ EVI+RFE+KGYKL+A+K++ PTE  A EHYADL+ +PFF GLVKYFSSGPIVAMVWEG DVILTGRK+LGATNPN + PG+LRGD CI  GRNL+HGSDGPESAKHEIGMWFT  E   + R++D W+ ADN
Sbjct:   36 AAGVSGIAAGLAFGAPAEAKAVKKVSPYTGIPGTKNERTFIAIKPDGVERGLISEVIARFEKKGYKLIALKLLTPTEARAREHYADLAGRPFFNGLVKYFSSGPIVAMVWEGTDVILTGRKILGATNPNQAAPGTLRGDNCISTGRNLVHGSDGPESAKHEIGMWFTAEEIQDYERSIDEWIVADN 221
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BLAST of mRNA_S-ischiensis_contig12.2608.1 vs. uniprot
Match: A0A485KUH1_9STRA (Nucleoside diphosphate kinase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KUH1_9STRA)

HSP 1 Score: 258 bits (658), Expect = 3.190e-84
Identity = 117/160 (73.12%), Postives = 140/160 (87.50%), Query Frame = 1 
Query:  154 PHTGVPGTDNERSFIAIKPDGVQRQLVGEVISRFERKGYKLVAMKMIWPTEKMAGEHYADLSKKPFFAGLVKYFSSGPIVAMVWEGPDVILTGRKMLGATNPNASEPGSLRGDYCIRVGRNLIHGSDGPESAKHEIGMWFTESECSAWPRTLDAWLTADN 633
            P+TG+PGT NER+FIAIKPDGV+R L+ EVI+RFE+KGYKLVA+K++ PTE  A EHYADLS +PFF GLVKYFSSGPIVAMVWEG DVILTGRK+LGATNPN + PG+LRGD CI  GRNL+HGSDGP+SAKHEIGMWFT++E + + R++D W+ ADN
Sbjct:   62 PYTGIPGTKNERTFIAIKPDGVERGLISEVIARFEKKGYKLVALKLLTPTEARAREHYADLSGRPFFNGLVKYFSSGPIVAMVWEGTDVILTGRKILGATNPNQAPPGTLRGDNCISTGRNLVHGSDGPDSAKHEIGMWFTQAEINDYHRSIDDWIVADN 221
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BLAST of mRNA_S-ischiensis_contig12.2608.1 vs. uniprot
Match: A0A024UVV3_9STRA (Nucleoside diphosphate kinase (Fragment) n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A024UVV3_9STRA)

HSP 1 Score: 257 bits (656), Expect = 1.170e-83
Identity = 121/166 (72.89%), Postives = 137/166 (82.53%), Query Frame = 1 
Query:  136 ACKASFPHTGVPGTDNERSFIAIKPDGVQRQLVGEVISRFERKGYKLVAMKMIWPTEKMAGEHYADLSKKPFFAGLVKYFSSGPIVAMVWEGPDVILTGRKMLGATNPNASEPGSLRGDYCIRVGRNLIHGSDGPESAKHEIGMWFTESECSAWPRTLDAWLTADN 633
            A K   P+TG+PGT NER+FIAIKPDGV+R L+ EVI RFE+KGYKLVAMK++ PTE  A EHYADLS +PFF GLVKYFSSGPIVAMVWEG DVILTGRK+LGATNPN + PG+LRGD  I  GRNLIHGSDGPESAKHEIGMWFT +E   + R +D W+ ADN
Sbjct:   74 AVKKVTPYTGIPGTKNERTFIAIKPDGVERALISEVIGRFEKKGYKLVAMKLLTPTEARAREHYADLSSRPFFNGLVKYFSSGPIVAMVWEGQDVILTGRKILGATNPNQAAPGTLRGDNTISTGRNLIHGSDGPESAKHEIGMWFTAAEIQDYERAIDEWIVADN 239
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BLAST of mRNA_S-ischiensis_contig12.2608.1 vs. uniprot
Match: A0A1W0ABA6_9STRA (Nucleoside diphosphate kinase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0ABA6_9STRA)

HSP 1 Score: 253 bits (646), Expect = 2.050e-82
Identity = 117/168 (69.64%), Postives = 140/168 (83.33%), Query Frame = 1 
Query:  130 LPACKASFPHTGVPGTDNERSFIAIKPDGVQRQLVGEVISRFERKGYKLVAMKMIWPTEKMAGEHYADLSKKPFFAGLVKYFSSGPIVAMVWEGPDVILTGRKMLGATNPNASEPGSLRGDYCIRVGRNLIHGSDGPESAKHEIGMWFTESECSAWPRTLDAWLTADN 633
            L A     P+TGVPGT +ER+FIAIKPDGV+R L+ EVI+RFE+KGYKLVAMKM+  TE  A +HYADLS KPFF GLVKYF+SGPIV MVWEG DVILTGRK+LGATNPN + PG+LRGD CI  GRNL+HGSDGP+SAKHEIGMWFT++E + + R++D W+ +DN
Sbjct:   53 LKAAPRVSPYTGVPGTKHERTFIAIKPDGVERGLISEVIARFEKKGYKLVAMKMMTATEARARDHYADLSSKPFFGGLVKYFASGPIVCMVWEGNDVILTGRKILGATNPNQAAPGTLRGDNCISTGRNLVHGSDGPDSAKHEIGMWFTQAEINDYARSIDEWVVSDN 220
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BLAST of mRNA_S-ischiensis_contig12.2608.1 vs. uniprot
Match: A0A662Y1S8_9STRA (Nucleoside diphosphate kinase n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y1S8_9STRA)

HSP 1 Score: 252 bits (644), Expect = 5.050e-82
Identity = 119/170 (70.00%), Postives = 141/170 (82.94%), Query Frame = 1 
Query:  124 RSLPACKASFPHTGVPGTDNERSFIAIKPDGVQRQLVGEVISRFERKGYKLVAMKMIWPTEKMAGEHYADLSKKPFFAGLVKYFSSGPIVAMVWEGPDVILTGRKMLGATNPNASEPGSLRGDYCIRVGRNLIHGSDGPESAKHEIGMWFTESECSAWPRTLDAWLTADN 633
            +S PA K   PHTGVPGT  ER+FIAIKPDGVQR L+ EVI+RFE+KGYKLVA+K++  +E+ A  HYADLS++PFF GLVKYF+SGPIV MVWEG DVILTGR++LGATNPN + PG+LRGD CI  GRNL+HGSDGP+SAKHEIGMWFT +E S + R LD W+ ADN
Sbjct:   59 QSKPAPK--VPHTGVPGTAKERTFIAIKPDGVQRGLISEVIARFEKKGYKLVALKLMTASEERARAHYADLSERPFFPGLVKYFTSGPIVCMVWEGTDVILTGRQILGATNPNQAAPGTLRGDNCISTGRNLVHGSDGPDSAKHEIGMWFTPAEVSDYQRALDTWIVADN 226
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BLAST of mRNA_S-ischiensis_contig12.2608.1 vs. uniprot
Match: K3W517_GLOUD (Nucleoside diphosphate kinase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W517_GLOUD)

HSP 1 Score: 248 bits (634), Expect = 1.610e-80
Identity = 125/185 (67.57%), Postives = 143/185 (77.30%), Query Frame = 1 
Query:   79 AAATAGLVAAVAGGERSLPACKASFPHTGVPGTDNERSFIAIKPDGVQRQLVGEVISRFERKGYKLVAMKMIWPTEKMAGEHYADLSKKPFFAGLVKYFSSGPIVAMVWEGPDVILTGRKMLGATNPNASEPGSLRGDYCIRVGRNLIHGSDGPESAKHEIGMWFTESECSAWPRTLDAWLTADN 633
            AAATA L   VA  E S     A   H GVPGT +ER+FIAIKPDGV+R L+ EVISRFE+KGYKLVAMK I  +E  A EHYADLS +PFF GLVKYF+SGPIV MVWEG DVILTGRK+LGATNPNA+ PG++RGD CI  GRNLIHGSDGP+SAKHEI MWF   E + + R LD+W+ +DN
Sbjct:   42 AAATAALAFGVAS-EPSQSKAVAPIAHAGVPGTKHERTFIAIKPDGVERGLIAEVISRFEKKGYKLVAMKFITASEARAREHYADLSARPFFPGLVKYFTSGPIVCMVWEGTDVILTGRKILGATNPNAAAPGTIRGDNCISTGRNLIHGSDGPDSAKHEITMWFKPEEMNNYERALDSWIVSDN 225
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BLAST of mRNA_S-ischiensis_contig12.2608.1 vs. uniprot
Match: M4B5V5_HYAAE (Nucleoside diphosphate kinase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B5V5_HYAAE)

HSP 1 Score: 248 bits (634), Expect = 1.720e-80
Identity = 114/160 (71.25%), Postives = 133/160 (83.12%), Query Frame = 1 
Query:  154 PHTGVPGTDNERSFIAIKPDGVQRQLVGEVISRFERKGYKLVAMKMIWPTEKMAGEHYADLSKKPFFAGLVKYFSSGPIVAMVWEGPDVILTGRKMLGATNPNASEPGSLRGDYCIRVGRNLIHGSDGPESAKHEIGMWFTESECSAWPRTLDAWLTADN 633
            PH GVPGT  ER+FIAIKPDGVQR L+ EVI+RFE+KGYKLVA+K++  TE+ A  HYADLS++PFF GLV YF+SGPIV MVWEG DVILTGRK+LGATNPN + PG+LRGD CI  GRNL+HGSDGP+SAKHEI MWFT +E S + R LD W+ ADN
Sbjct:   68 PHAGVPGTSKERTFIAIKPDGVQRGLISEVIARFEKKGYKLVALKLMTATEERAKAHYADLSERPFFPGLVDYFTSGPIVCMVWEGTDVILTGRKILGATNPNQAAPGTLRGDNCISTGRNLVHGSDGPDSAKHEISMWFTAAEMSNYDRALDTWIVADN 227
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig12.2608.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FGR6_ECTSI7.630e-10387.65NDK domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835YSZ5_9STRA4.660e-8975.46Nucleoside diphosphate kinase n=1 Tax=Tribonema mi... [more]
A0A7S2XZK8_9STRA1.370e-8566.84Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6G0XYC2_9STRA2.250e-8466.67Nucleoside diphosphate kinase n=1 Tax=Aphanomyces ... [more]
A0A485KUH1_9STRA3.190e-8473.13Nucleoside diphosphate kinase n=1 Tax=Aphanomyces ... [more]
A0A024UVV3_9STRA1.170e-8372.89Nucleoside diphosphate kinase (Fragment) n=5 Tax=A... [more]
A0A1W0ABA6_9STRA2.050e-8269.64Nucleoside diphosphate kinase n=1 Tax=Thraustothec... [more]
A0A662Y1S8_9STRA5.050e-8270.00Nucleoside diphosphate kinase n=2 Tax=Nothophytoph... [more]
K3W517_GLOUD1.610e-8067.57Nucleoside diphosphate kinase n=1 Tax=Globisporang... [more]
M4B5V5_HYAAE1.720e-8071.25Nucleoside diphosphate kinase n=1 Tax=Hyaloperonos... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig12contigS-ischiensis_contig12:1237221..1241978 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score306.6
Seed ortholog evalue9e-81
Seed eggNOG ortholog2880.D7FGR6
Preferred nameNDPK2
KEGG rclassRC00002
KEGG koko:K00940
KEGG ReactionR00124,R00139,R00156,R00330,R00570,R00722,R01137,R01857,R02093,R02326,R02331,R03530,R11894,R11895
KEGG Pathwayko00230,ko00240,ko00983,ko01100,ko01110,ko01130,ko04016,map00230,map00240,map00983,map01100,map01110,map01130,map04016
KEGG ModuleM00049,M00050,M00052,M00053
GOsGO:0000302,GO:0003674,GO:0003824,GO:0004550,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005740,GO:0005758,GO:0006139,GO:0006165,GO:0006213,GO:0006220,GO:0006221,GO:0006241,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0007154,GO:0007165,GO:0007602,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009132,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009208,GO:0009209,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009314,GO:0009411,GO:0009416,GO:0009507,GO:0009526,GO:0009532,GO:0009536,GO:0009570,GO:0009579,GO:0009581,GO:0009582,GO:0009583,GO:0009585,GO:0009605,GO:0009628,GO:0009636,GO:0009639,GO:0009719,GO:0009725,GO:0009733,GO:0009734,GO:0009755,GO:0009941,GO:0009987,GO:0010017,GO:0010033,GO:0010035,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0023052,GO:0031967,GO:0031970,GO:0031974,GO:0031975,GO:0032870,GO:0033554,GO:0034404,GO:0034599,GO:0034614,GO:0034641,GO:0034654,GO:0035690,GO:0042221,GO:0042455,GO:0042493,GO:0042542,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044429,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046036,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0046677,GO:0046939,GO:0050789,GO:0050794,GO:0050896,GO:0051606,GO:0051716,GO:0055086,GO:0061508,GO:0065007,GO:0070013,GO:0070301,GO:0070887,GO:0071214,GO:0071236,GO:0071310,GO:0071365,GO:0071478,GO:0071482,GO:0071489,GO:0071495,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:0097237,GO:0104004,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659,GO:1901700,GO:1901701
EggNOG free text desc.Nucleoside diphosphate kinase
EggNOG OGsCOG0105@1,KOG0888@2759
EC2.7.4.6
COG Functional cat.F
BiGG ReactioniRC1080.CRv4_Au5_s16_g6072_t1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04131
Hectar predicted targeting categorymitochondrion
Ec32 ortholog descriptionNucleoside diphosphate kinase
Ec32 orthologEc-04_001140.1
Exons6
Model size636
Cds size636
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig12.2608.1prot_S-ischiensis_contig12.2608.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig12 1237221..1241978 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815648.827486-CDS-S-ischiensis_contig12:1237220..12375511622815648.827486-CDS-S-ischiensis_contig12:1237220..1237551Schizocladia ischiensis KU_0333CDSS-ischiensis_contig12 1237221..1237551 +
1695739826.7952995-CDS-S-ischiensis_contig12:1237220..12375511695739826.7952995-CDS-S-ischiensis_contig12:1237220..1237551Schizocladia ischiensis KU_0333CDSS-ischiensis_contig12 1237221..1237551 +
1622815648.8502653-CDS-S-ischiensis_contig12:1238510..12385781622815648.8502653-CDS-S-ischiensis_contig12:1238510..1238578Schizocladia ischiensis KU_0333CDSS-ischiensis_contig12 1238511..1238578 +
1695739826.8070536-CDS-S-ischiensis_contig12:1238510..12385781695739826.8070536-CDS-S-ischiensis_contig12:1238510..1238578Schizocladia ischiensis KU_0333CDSS-ischiensis_contig12 1238511..1238578 +
1622815648.8623292-CDS-S-ischiensis_contig12:1239366..12394421622815648.8623292-CDS-S-ischiensis_contig12:1239366..1239442Schizocladia ischiensis KU_0333CDSS-ischiensis_contig12 1239367..1239442 +
1695739826.8154893-CDS-S-ischiensis_contig12:1239366..12394421695739826.8154893-CDS-S-ischiensis_contig12:1239366..1239442Schizocladia ischiensis KU_0333CDSS-ischiensis_contig12 1239367..1239442 +
1622815648.8724413-CDS-S-ischiensis_contig12:1240761..12408171622815648.8724413-CDS-S-ischiensis_contig12:1240761..1240817Schizocladia ischiensis KU_0333CDSS-ischiensis_contig12 1240762..1240817 +
1695739826.8244514-CDS-S-ischiensis_contig12:1240761..12408171695739826.8244514-CDS-S-ischiensis_contig12:1240761..1240817Schizocladia ischiensis KU_0333CDSS-ischiensis_contig12 1240762..1240817 +
1622815648.883941-CDS-S-ischiensis_contig12:1241323..12413681622815648.883941-CDS-S-ischiensis_contig12:1241323..1241368Schizocladia ischiensis KU_0333CDSS-ischiensis_contig12 1241324..1241368 +
1695739826.8354483-CDS-S-ischiensis_contig12:1241323..12413681695739826.8354483-CDS-S-ischiensis_contig12:1241323..1241368Schizocladia ischiensis KU_0333CDSS-ischiensis_contig12 1241324..1241368 +
1622815648.8970718-CDS-S-ischiensis_contig12:1241918..12419781622815648.8970718-CDS-S-ischiensis_contig12:1241918..1241978Schizocladia ischiensis KU_0333CDSS-ischiensis_contig12 1241919..1241978 +
1695739826.845287-CDS-S-ischiensis_contig12:1241918..12419781695739826.845287-CDS-S-ischiensis_contig12:1241918..1241978Schizocladia ischiensis KU_0333CDSS-ischiensis_contig12 1241919..1241978 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig12.2608.1

>prot_S-ischiensis_contig12.2608.1 ID=prot_S-ischiensis_contig12.2608.1|Name=mRNA_S-ischiensis_contig12.2608.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=212bp
ARASVRAVSSAAAASSYKAGSVLGLGAAATAGLVAAVAGGERSLPACKAS
FPHTGVPGTDNERSFIAIKPDGVQRQLVGEVISRFERKGYKLVAMKMIWP
TEKMAGEHYADLSKKPFFAGLVKYFSSGPIVAMVWEGPDVILTGRKMLGA
TNPNASEPGSLRGDYCIRVGRNLIHGSDGPESAKHEIGMWFTESECSAWP
RTLDAWLTADN*
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mRNA from alignment at S-ischiensis_contig12:1237221..1241978+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig12.2608.1 ID=mRNA_S-ischiensis_contig12.2608.1|Name=mRNA_S-ischiensis_contig12.2608.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=4758bp|location=Sequence derived from alignment at S-ischiensis_contig12:1237221..1241978+ (Schizocladia ischiensis KU_0333)
GCCCGGGCCTCGGTCCGGGCGGTGTCGAGCGCCGCGGCGGCCTCGTCATA
CAAGGCGGGCAGTGTCCTCGGCCTCGGAGCAGCGGCCACTGCTGGCTTGG
TGGCGGCGGTCGCTGGGGGCGAGCGTAGCCTCCCGGCCTGCAAGGCCTCC
TTCCCCCACACGGGCGTGCCGGGGACCGACAACGAGAGGTCTTTCATCGC
CATCAAGCCCGATGGGGTGCAGCGCCAGCTGGTGGGGGAGGTCATCAGCC
GGTTCGAGCGCAAGGGGTACAAGTTGGTGGCTATGAAGATGATATGGCCC
ACCGAGAAGATGGCGGGCGAGCACTACGCGGGTGAGCAGCCTCAGAAGAC
GTGGTGAAAGGCATCCCGTCTGACTTTGGCACCTCCTTCGCACTCATGTT
GCCTTTGACCGGGAAGAAGCGCCATTGCCAGGCATCTGGGCCTCTGACTG
CGTTGCTTGTGGTATTTTTGCTATGGTGTGCCACGGTGCAGATGTGTATT
TTCTCTTTTTTCAAGAAGACAAACAAGCGCGTGGGAAGAAGAGGTGTTCC
TACGTACGCGAGTTCAGGGCCCCGCCTCTCTTTGCGCGGCGCATGCTTTT
TGGTTGATTACGGTTGCAGTTGCATGAACGATGGCGGCCCGCCCTTCCCC
TCCTCATCATGTTCTGTGATGCCACTCACATGCACAATGGACTTTCCATT
CCCTGCTTCATCTCAGAGGTCTCGCCTCTCACCCCTTGTCTACTAGTACA
GTGCCTGCGTTTGCTTTCGCCTCCTGTTTTGGGCATATCTTTTCGCTTCC
GCGCACTCAGTTTCCGTGTCATGGGTGCACGTGTGTGCCGTAGGATACAT
TTCTGTGCACTTGCGTGTACTTGCAGTAGTTTCGGTGTCCTGGGTGCACG
TGCGTACCGTAATGTTTGTGTGCGTGTGCGTGTACTTAGTTTCCGTGCCA
TGTCACGTGTGTTGCACTCGTACCGAACGTTTGTGTGCGCGTGCGTGCCC
TGGGCGCGTGCTTCGTCCCATGCATACATGCCTGCATTACTGACACCAAC
CCTAATGATGATAGCAGAGATTCTCCTGGACTGAGAGTGCTACAAGGGGC
TGTAAAGAGTCTTGTATAGGGGACAGAGGCCATGTGTGTCGTTTTGAACA
TCATGGATACAGATGTTCTGGCAGCTCTCACCCTTTTCCCCTGCTCTTGC
TATGCAACCTCTACTCGCCTCTCCTGTTCACCTTCCCCGACCTAGCCCTG
CCCAATTCCTTTGCCCACGCTGACCCCAACCAATCCCCAGACCTGTCGAA
GAAGCCCTTCTTTGCGGGGCTGGTCAAGTACTTCTCCAGCGGCCCCATCG
TCGCCATGGTGAGTGCATCAGTCAGGAGGGAGGGAGGGAAGGAGGGAGCA
GGTTTGGCACTTAGAGGTTAATTAGGGCCTAATTACCCTTCATTTTAGGT
CTAAATACCCGTGATTGCCTCTACTACCGGGCCTAGAAGGGCACAACTTA
GGGGTTACTGTAAGTGCCAACCCGGGTGAGTCGAGAGGGAGGGAGGGAGG
GAGAGCTGAGACCTACAGCAGTCCTCCATCCTCACAACTCACTGGGAGAG
TTGCCGAAGAGATGTTGATGTGATGTGATGAGATGTGATGTCAAACTTCA
GTACATTAGAGTACACATCGCATCAAGTCACATCACACCACATCACACTT
GTCCGAGTCAGAACTCAATGGACTTATCCCAGTCACAAGCGTGTGCATCT
GCAGCTTGGGGCGACTTGGGAAGGACGAATCTTGGATTCACTCGCACGAC
GACCGGCTACATCAAACTGCAGAGCATTGCACAACACGCCGCTTCAAATC
ACATAACGCCGCATGGCACCACTGCCTACCCCCCCCTCCCCCCCCCTAAC
CATGCTACAAAAGTGTGATCGCTATTTTTCGTGCCCGAGCCGCCCTATGA
GGGGCGCATCGGATGGCCGCGAAATTTTGACACATGAAAGAGCTCGATGA
GTACGTTTCTTTCTTTGCGCTATAGCTTTCGTATCACAACATCACATGGG
CCGAGCAACACGTCTATCGATATTCGATAGAACTATTTGGGCAAAAAAAA
AACCACTTTTGTGCTTAGCATGGTTAACCCCCCCCCCCTCTGCCAGGTGT
GGGAGGGCCCAGATGTGATCCTCACCGGGCGCAAGATGCTGGGGGCCACG
AACCCAAACGCCTCCGAGCCGGGTGAGCGCTGACAGGGTTGGCACTTGGA
GGTTAGGGCCTCTTCAGCCTCCATTTTCTGTCCAATTACCCCTAATTAGC
TGTAACTAGCGACCTAAAAGGGCACCACCTACGTAGGGGTTAAGTGCCAA
CCCTGAGCGATGATGCCTCGCCGCGGCGATGCGATGTGATGTGATGCAAC
GTGAGATCGAACTACTCTGTTGTACAAGTAGCGTACAACTCGTATCTCAT
TGCATCGCATGGCATTGCGTCCATCACATCTCATCGCACCACGTAATACC
TAACACCTCCGATCTGGGTGAGCGATGATGCCTCTCGCCCCGGCCATGCG
ATGCGGTACGATGCGATGTGATGTGAGATCGAACTACTCCGGTGTAGCGT
ACAATTCGTACCGCCGTGTCCCGGCACGGTGAGGGAACCCCCTCCCCCGA
TAGGTCTCGGTCTAGCAGGGGAGCCCCCCCCCCCATCCGGACTCTCACGA
GTCGGGGAAGGGGGGGGTATGGACCTGGCCACCCTTCCGCTTCTGGCGGG
GGGGTGGCCACCCCCTCCCACTCTGGCTCTGCCTGGGGTTGGCCCCCATA
CGGGGTAGCCTTACGGCCATTGGCCACGCGGCCCTACTACACCGGGCCGG
AGCATTCCGGTTTTTCACCGGACAGGCGCCCGCCGCTCCCGACTGTGCCA
TACCCGAGGCCGACAAGCCGGTACGGCTCCCATGATTTTTTCAATGTTGC
GCGTGTTTCGGGAGGGGTCCATTTTTCGCGGAAATCGACTCCACACAGGG
AATCGAACTCGCAACCTTGGGCTCGCTAAAGTCGTCGGTAGACCACTCGC
CTAGACGAGCGCCGTGAGTATAAACATATATCATCACATCCACGGGGGTT
CGCCAACCCAAACGCCTGCGAGACGGGTGAGCGGGATGAGGGCTTGCCCC
GGCGATGCGATGCGACCAACAGCCACGTATGTGCTCACGTTCGGACGAGG
TTTCTCGTCTCTGTGCATGCCCTGGACCTGAACGATCCTCCTCTTTTCTC
CTTCTCGCGGGATCGCTGGCTAGCTGTAGCTTTCGCCATTGGCCACCCAT
CCTATTTGACGGACCACGCTCATGTGCCACCCAAACACTTGACCTAGCGC
TGGTGCCTGCTCTTGCTCGCTGCTGCTGCCGCCGCCGCTGCTGCTGCGTG
TCCCTGGTTGCGTGGTAGGATCCCACCGGGGGGCGCTACTGCATCTTTGA
ATAGAGGTAGTTAGGGGTAATTGCTGTAGACCTACAACGAAGGCTAGTTA
GGCGCTAATTAACCTCTAATTGCCAACCCTGTGCGTGGCAGGATCCCTCC
GGGGGGACTACTGCATTCGGGTGGGGCGCAACCTCATCCACGGTTCGGTG
AGTGCCGTCTGTTGCACCGGTACTACTGTGTTTCCAATCCTCTCCTTCCT
CTTCTTCCCCCCCCTCCCCCTCCTCCTCCTCCTCCTCCTCCTCTTCCTCC
CTATCCGCCTCCCCCTCCTCCTTTCTCTCCTTCCCCACACAACCTTCCCC
TGGGGAGCTATGAGGAAGGGCCACTGTTGAGGTCTTTAGTGATGTGGCCT
GCACCTCGCTCTGTGTTGTTCCTGTTAATGCTGCTGCTCCAAGTGCTGCT
GTGGTCCGTACCGTGCATTACCGTAGCAGTACAGTACTGCAGCACCTGCT
GTACTTGTAATCTACTTTGTAGAGTTGCGGAAGCCGCCGGGTTCGTCGGC
AGGCGCAATCCGGCCCCAAAACCACTGCAGTTTCAATCCCGTGCGGGAAA
CCGCCGACCCTTGTGACCCCTTTTGTTTACTCCAAACCGTGCCATACGTA
ACATATGTTGACCTGTGTCCATGTCTGTCTGCGGTTGTTCCCTTGGGCGG
CAGGACGGGCCGGAGTCCGCCAAGCACGAGATTGGCATGTGGTTCACGGT
GAGAAACACCTGCCATCGATGTGGTTTTGCAGTACATAGTTTTTTGCAAG
AAGATCAACAAGCGAGTGGGAAAGAGAAGGTGTCCCTACCTACGCTAGTT
TAGGACCCCATCCCCGGAAGCCCTTCCTTTCACTCGCCTTCACTGGCAGG
GCACACAGAGCAGAAAAACCAAGAAAACAAGCAAGGAATAGGGCATGGTT
GTTGTGATGGCAACGCGATTTTGGGGCCCAAACTGGGGGCCTCACCCGAG
GACCTTGTTTCACTCGCAGGACACAAAAGCGAAGCGAAAACCGAGCAAAG
TAGCAACCGAACACGCTGGGGCAGTGCAGGGGGGGCGCGTTTGTGCCTCT
CCCCCCCCCCCCCCTCCCTGTCTGTCTCCCTCCCTCCCTCCCTCTAAGCT
CTCTCTCTCCCCCGTCTCTGACTCCCTCCAGCTCTCTTACTCCCTGACGC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCGT
CTCTCTCTCTCTCTCCCCGTTCCTACTGTATGTTGTACAAAAACGCAGGA
GTCGGAGTGCTCCGCGTGGCCCCGCACCCTGGACGCGTGGCTCACAGCCG
ACAACTGA
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Coding sequence (CDS) from alignment at S-ischiensis_contig12:1237221..1241978+

>mRNA_S-ischiensis_contig12.2608.1 ID=mRNA_S-ischiensis_contig12.2608.1|Name=mRNA_S-ischiensis_contig12.2608.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1272bp|location=Sequence derived from alignment at S-ischiensis_contig12:1237221..1241978+ (Schizocladia ischiensis KU_0333)
GCCCGGGCCTCGGTCCGGGCGGTGTCGAGCGCCGCGGCGGCCTCGTCATA
CAAGGCGGGCAGTGTCCTCGGCCTCGGAGCAGCGGCCACTGCTGGCTTGG
TGGCGGCGGTCGCTGGGGGCGAGCGTAGCCTCCCGGCCTGCAAGGCCTCC
TTCCCCCACACGGGCGTGCCGGGGACCGACAACGAGAGGTCTTTCATCGC
CATCAAGCCCGATGGGGTGCAGCGCCAGCTGGTGGGGGAGGTCATCAGCC
GGTTCGAGCGCAAGGGGTACAAGTTGGTGGCTATGAAGATGATATGGCCC
ACCGAGAAGATGGCGGGCGAGCACTACGCGGGCCCGGGCCTCGGTCCGGG
CGGTGTCGAGCGCCGCGGCGGCCTCGTCATACAAGGCGGGCAGTGTCCTC
GGCCTCGGAGCAGCGGCCACTGCTGGCTTGGTGGCGGCGGTCGCTGGGGG
CGAGCGTAGCCTCCCGGCCTGCAAGGCCTCCTTCCCCCACACGGGCGTGC
CGGGGACCGACAACGAGAGGTCTTTCATCGCCATCAAGCCCGATGGGGTG
CAGCGCCAGCTGGTGGGGGAGGTCATCAGCCGGTTCGAGCGCAAGGGGTA
CAAGTTGGTGGCTATGAAGATGATATGGCCCACCGAGAAGATGGCGGGCG
AGCACTACGCGGACCTGTCGAAGAAGCCCTTCTTTGCGGGGCTGGTCAAG
TACTTCTCCAGCGGCCCCATCGTCGCCATGACCTGTCGAAGAAGCCCTTC
TTTGCGGGGCTGGTCAAGTACTTCTCCAGCGGCCCCATCGTCGCCATGGT
GTGGGAGGGCCCAGATGTGATCCTCACCGGGCGCAAGATGCTGGGGGCCA
CGAACCCAAACGCCTCCGAGCCGGGTGTGGGAGGGCCCAGATGTGATCCT
CACCGGGCGCAAGATGCTGGGGGCCACGAACCCAAACGCCTCCGAGCCGG
GATCCCTCCGGGGGGACTACTGCATTCGGGTGGGGCGCAACCTCATCCAC
GGTTCGGATCCCTCCGGGGGGACTACTGCATTCGGGTGGGGCGCAACCTC
ATCCACGGTTCGGACGGGCCGGAGTCCGCCAAGCACGAGATTGGCATGTG
GTTCACGGACGGGCCGGAGTCCGCCAAGCACGAGATTGGCATGTGGTTCA
CGGAGTCGGAGTGCTCCGCGTGGCCCCGCACCCTGGACGCGTGGCTCACA
GCCGACAACTGAGAGTCGGAGTGCTCCGCGTGGCCCCGCACCCTGGACGC
GTGGCTCACAGCCGACAACTGA
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