mRNA_S-ischiensis_contig12.2534.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig12.2534.1 vs. uniprot
Match: D7G790_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G790_ECTSI) HSP 1 Score: 144 bits (362), Expect = 3.370e-40 Identity = 67/105 (63.81%), Postives = 84/105 (80.00%), Query Frame = 2
Query: 80 ELGTRLMFHRPEDPNAFLLEVLGTLAKAKTANKPTTFFTPEDVNAMFSLFDPTGKGHISPDQYKQALKSLGIEDSRVAVPQGARISRADFEKCITEGLAANSLTA 394
ELGTR+M+HRP+DPN FLLEVLGTL A+ PTTFFT ED++AMFSLFDPTG+GHIS +QY+ ALK+LGI+D V P+ RIS+ +F CI++ L ANS+TA
Sbjct: 34 ELGTRVMYHRPKDPNKFLLEVLGTLKSAQGQGTPTTFFTDEDIDAMFSLFDPTGRGHISHEQYENALKTLGIDDPSVGAPKHKRISKDEFRSCISKELLANSVTA 138
BLAST of mRNA_S-ischiensis_contig12.2534.1 vs. uniprot
Match: A0A7S2CBI3_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CBI3_9STRA) HSP 1 Score: 142 bits (357), Expect = 1.450e-39 Identity = 73/126 (57.94%), Postives = 91/126 (72.22%), Query Frame = 2
Query: 20 DPREEARQYMAEKGIDKLFQELGTRLMFHRPEDPNAFLLEVLGTLAKAKTANKPTTFFTPEDVNAMFSLFDPTGKGHISPDQYKQALKSLGIEDSRVAVPQGA--RISRADFEKCITEGLAANSLT 391
DPR++A+ Y+AEK +D LFQELGTRL+F RPEDPNAFLL VL L K ++ P+TFFT EDV +F +FDPTG+G IS QY QAL S+GIE V +P A ++ RA F +C+ E LAA SLT
Sbjct: 4 DPRKDAQDYIAEKRVDILFQELGTRLVFERPEDPNAFLLSVLEGLKKNRSDKVPSTFFTTEDVMTLFDMFDPTGRGEISAAQYDQALLSMGIESPTVTLPGHATTKVDRATFARCVKEELAALSLT 129
BLAST of mRNA_S-ischiensis_contig12.2534.1 vs. uniprot
Match: A0A7S2S3G4_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S3G4_9STRA) HSP 1 Score: 134 bits (336), Expect = 3.540e-36 Identity = 66/124 (53.23%), Postives = 89/124 (71.77%), Query Frame = 2
Query: 20 DPREEARQYMAEKGIDKLFQELGTRLMFHRPEDPNAFLLEVLGTLAKAKTANKPTTFFTPEDVNAMFSLFDPTGKGHISPDQYKQALKSLGIEDSRVAVPQGARISRADFEKCITEGLAANSLT 391
DPR++A+QYM + I++LFQELGTRL++ R EDPNAFLLEVL + K ++KPT FFT ED+ MF +FDPT KG IS +QY+QAL S+G+E +V V +I R F +CI + + A SL+
Sbjct: 23 DPRKDAQQYMEKHKINELFQELGTRLVYERREDPNAFLLEVLEEIQKNSASSKPTEFFTSEDIITMFEMFDPTNKGEISREQYEQALASIGVETPKVNVMTKMKIDRQTFCRCIADEIRALSLS 146
BLAST of mRNA_S-ischiensis_contig12.2534.1 vs. uniprot
Match: A0A835ZCG4_9STRA (EF-hand domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCG4_9STRA) HSP 1 Score: 121 bits (304), Expect = 6.920e-32 Identity = 58/106 (54.72%), Postives = 78/106 (73.58%), Query Frame = 2
Query: 77 QELGTRLMFHRPEDPNAFLLEVLGTLAKAKTANKPTTFFTPEDVNAMFSLFDPTGKGHISPDQYKQALKSLGIEDSRVAVPQGA--RISRADFEKCITEGLAANSL 388
QEL TR+M+HRP DPNAFLLEVL TL A+ + PT FFT ED+ A F + DPTGKG +S QY+QAL+++G+E VA+P+G R+ R+ F++C+ E LAA S+
Sbjct: 1 QELCTRVMYHRPSDPNAFLLEVLDTLRTARDSMVPTAFFTAEDIEATFGMMDPTGKGSVSRQQYEQALRNVGVEKPAVALPEGEQERVCRSTFQRCMQEELAAASV 106
BLAST of mRNA_S-ischiensis_contig12.2534.1 vs. uniprot
Match: A0A8K1C250_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C250_PYTOL) HSP 1 Score: 100 bits (250), Expect = 1.610e-23 Identity = 51/119 (42.86%), Postives = 77/119 (64.71%), Query Frame = 2
Query: 14 MEDPREEARQYMAEKGIDKLFQELGTRLMFHRPEDPNAFLLEVLGTLAKAKTANKPTTFFTPEDVNAMFSLFDPTGKGHISPDQYKQALKSLGIEDSRVAVPQG-ARISRADFEKCITE 367
M+DP+ A+ YM GI +LF LGT L+FHRPE+P AFL + LG + AK FF +D++AMF FD +G+I+P QY+QAL+SLGI+ + +P+ ++I+ F + +T+
Sbjct: 1 MKDPKVRAQLYMDSHGIKELFDGLGTLLLFHRPENPRAFLAQQLGEMQLAKQNQSHVPFFEEQDLDAMFEAFDIKDQGYITPAQYEQALRSLGIDKPTLRLPESVSQINHTLFVRSLTQ 119
BLAST of mRNA_S-ischiensis_contig12.2534.1 vs. uniprot
Match: A0A7S2UY53_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UY53_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 1.670e-21 Identity = 44/93 (47.31%), Postives = 61/93 (65.59%), Query Frame = 2
Query: 62 IDKLFQELGTRLMFHRPEDPNAFLLEVLGTLAKAKTANKPTTFFTPEDVNAMFSLFDPTGKGHISPDQYKQALKSLGIEDSRVAVPQGARISR 340
I+ +FQ+LGTRLMF RPE+PN FL+ L + A+ + FFT EDV MF ++DPT KG ++ DQY ALK++GIE V V R+++
Sbjct: 5 INTIFQDLGTRLMFARPENPNEFLVNALTEIRTARRKKQQMPFFTEEDVETMFGMYDPTNKGFVTMDQYYSALKNVGIEQPTVPVTNSGRMNQ 97
BLAST of mRNA_S-ischiensis_contig12.2534.1 vs. uniprot
Match: K3WBI5_GLOUD (EF-hand domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WBI5_GLOUD) HSP 1 Score: 95.9 bits (237), Expect = 2.240e-21 Identity = 48/119 (40.34%), Postives = 75/119 (63.03%), Query Frame = 2
Query: 14 MEDPREEARQYMAEKGIDKLFQELGTRLMFHRPEDPNAFLLEVLGTLAKAKTANKPTTFFTPEDVNAMFSLFDPTGKGHISPDQYKQALKSLGIEDSRVAVPQG-ARISRADFEKCITE 367
M+DP+ A Y GI +LF+ +GT L+FHRPE+P FL + L + +AK + FF D+ AMF+ FD T +G+I+P+QY QALK+LGI+ + +P+ + I+ F + +T+
Sbjct: 19 MKDPKVRADLYTQTHGIKELFEGMGTLLLFHRPENPRQFLAQHLAEIQRAKQSQVHVPFFEEHDLEAMFAAFDVTDRGYITPEQYDQALKNLGIDQPTLRLPESVSAINHNLFIRSMTQ 137
BLAST of mRNA_S-ischiensis_contig12.2534.1 vs. uniprot
Match: A0A8J2WMQ0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WMQ0_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 2.450e-21 Identity = 54/126 (42.86%), Postives = 73/126 (57.94%), Query Frame = 2
Query: 20 DPREEARQYMAEKGIDKLFQELGTRLMFHRPEDPNAFLLEVLGTLAKAKTANKPTTFFTPEDVNAMFSLFDPTGKGHISPDQYKQALKSLGIEDSRVAVPQGARI-SRADFEKCITEGLAANSLTA 394
DPR EA Y+ GI +LF +LG RLMF RP+DPNAFLLE L + +K FFT D+ A F+ DP G I+ QY ALKS+G+E + + +G + ++ DF + + LA LTA
Sbjct: 4 DPRAEANAYLRAHGIKELFADLGARLMFERPKDPNAFLLEELERVQDSKVRG----FFTDTDIAACFAALDPHDTGTITAKQYAHALKSMGVEAPKEPLDEGTEVVAKDDFMERMKRELAPPPLTA 125
BLAST of mRNA_S-ischiensis_contig12.2534.1 vs. uniprot
Match: A0A2D4C2E5_PYTIN (EF-hand domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C2E5_PYTIN) HSP 1 Score: 84.3 bits (207), Expect = 4.700e-17 Identity = 47/120 (39.17%), Postives = 72/120 (60.00%), Query Frame = 2
Query: 11 SMEDPREEARQYMAEKGIDKLFQELGTRLMFHRPEDPNAFLLEVLGTLAKAKTANKPTTFFTPEDVNAMFSLFDPTGKGHISPDQYKQALKSLGIEDSRVAVPQG-ARISRADFEKCITE 367
+M+ P+ A YM GI +LF LGT L+FHRP+ P AFL + L L ++K D++AMF+ FD +G I+P QY QALKSLGI+ + +P+ ++I+ + F + +T+
Sbjct: 16 NMKXPKVRANLYMQTHGIKELFDGLGTLLLFHRPDXPRAFLAQHLADLQRSKQNQS-------HDLDAMFASFDVNDQGFITPAQYDQALKSLGIDRPTLRLPESISQITHSLFTRSMTQ 128
BLAST of mRNA_S-ischiensis_contig12.2534.1 vs. uniprot
Match: A0A7L3P0V6_9DEND (EFC10 protein (Fragment) n=2 Tax=Passeriformes TaxID=9126 RepID=A0A7L3P0V6_9DEND) HSP 1 Score: 83.6 bits (205), Expect = 5.350e-17 Identity = 44/112 (39.29%), Postives = 66/112 (58.93%), Query Frame = 2
Query: 29 EEARQYMAEKGIDKLFQELGTRLMFHRPEDPNAFLLEVLGTLAKAKTANKPTTFFTPE-DVNAMFSLFDPTGKGHISPDQYKQALKSLGIEDSRVAVPQGARISRADFEKCI 361
E++RQY+ + +L Q LG L+FHRPE P FL++VL + + A E +V AMFSL D G+GHI+P QY++ALK+LG+ D + V I+ F++ +
Sbjct: 6 EQSRQYLERHRLPQLLQHLGALLLFHRPEKPREFLIQVLERVKAGRRAEGEFPDLMDEANVEAMFSLLDVLGQGHITPAQYREALKTLGLSDENLEVGDDETITLDVFKEGV 117 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig12.2534.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig12.2534.1 >prot_S-ischiensis_contig12.2534.1 ID=prot_S-ischiensis_contig12.2534.1|Name=mRNA_S-ischiensis_contig12.2534.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=128bp MEDPREEARQYMAEKGIDKLFQELGTRLMFHRPEDPNAFLLEVLGTLAKAback to top mRNA from alignment at S-ischiensis_contig12:251831..258959+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig12.2534.1 ID=mRNA_S-ischiensis_contig12.2534.1|Name=mRNA_S-ischiensis_contig12.2534.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=7129bp|location=Sequence derived from alignment at S-ischiensis_contig12:251831..258959+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig12:251831..258959+ >mRNA_S-ischiensis_contig12.2534.1 ID=mRNA_S-ischiensis_contig12.2534.1|Name=mRNA_S-ischiensis_contig12.2534.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=768bp|location=Sequence derived from alignment at S-ischiensis_contig12:251831..258959+ (Schizocladia ischiensis KU_0333)back to top |