prot_S-ischiensis_contig12.2594.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig12.2594.1
Unique Nameprot_S-ischiensis_contig12.2594.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length136
Homology
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BLAST of mRNA_S-ischiensis_contig12.2594.1 vs. uniprot
Match: A0A6H5JUP5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUP5_9PHAE)

HSP 1 Score: 54.3 bits (129), Expect = 1.070e-6
Identity = 27/54 (50.00%), Postives = 32/54 (59.26%), Query Frame = 0 
Query:   57 CREDGCTTRAHFGEEGEKATYCSAHKR--EGMVDVTSARCQAAGCTKAAXXGHE 108
            C E+ C  R  FG  G K  YC+ H R  EGMVDV+S RC+A GC K    G+E
Sbjct:   27 CVEEPCRRRPFFGPPGGKPMYCAPHARNKEGMVDVSSRRCEAVGCAKWPLYGNE 80
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BLAST of mRNA_S-ischiensis_contig12.2594.1 vs. uniprot
Match: A0A6C0HSH3_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0HSH3_9ZZZZ)

HSP 1 Score: 53.1 bits (126), Expect = 1.740e-5
Identity = 21/39 (53.85%), Postives = 26/39 (66.67%), Query Frame = 0 
Query:   56 ICREDGCTTRAHFGEEGEKATYCSAHKREGMVDVTSARC 94
            +C+E GC  R  F  EGEKA+YC  HK+EGM+DV    C
Sbjct:    1 MCKETGCNKRPSFNYEGEKASYCKDHKKEGMIDVAHKLC 39
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig12.2594.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JUP5_9PHAE1.070e-650.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6C0HSH3_9ZZZZ1.740e-553.85Uncharacterized protein n=1 Tax=viral metagenome T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig12contigS-ischiensis_contig12:1108909..1109316 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig12.2594.1mRNA_S-ischiensis_contig12.2594.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig12 1108909..1109548 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig12.2594.1 ID=prot_S-ischiensis_contig12.2594.1|Name=mRNA_S-ischiensis_contig12.2594.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=136bp
RGPGTSEISTLGSGSSQTVRATAGGEAARVGVAEARGRRGAPSGPNKKKH
SLHRVICREDGCTTRAHFGEEGEKATYCSAHKREGMVDVTSARCQAAGCT
KAASFGHEADRRRMFCGSHRMPGMVNVAKLHRTRR*
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