mRNA_S-ischiensis_contig115.2462.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig115.2462.1 vs. uniprot
Match: A0A835Z2B9_9STRA (NnrU protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2B9_9STRA) HSP 1 Score: 484 bits (1245), Expect = 4.430e-164 Identity = 218/307 (71.01%), Postives = 262/307 (85.34%), Query Frame = 2
Query: 89 LAMSARDMDQLQRGSGLVGEDSAYFSMEEQTLQAWGSFLAVLGTVLTALYFLWINPDTGFGDDFVRVLEDVSGGDTSITAVLILGIFAVAHSGLASLRPKGEELIGARAWRVLFGVVSLPLALSAVVYFINHRYDGIHLWDIKTVPGVHDLLWITNFLSFFFLYPSTFNLLEVAAVDKPKLHLWETGIIRITRHPQFVGQAMWCGAHLAWIGTSFTAVVSSMLMAHHAFAIWNGDRRLRDKHGEAFEAVKERTSFVPFQAIIEGRQQLPEDYASEFARGPYLLITVLTIGAYFAHPFMQAGSWSLQW 1009
L +S RD+++LQ SGL+GED+A FS++EQ L +W SF V V+ AL++LWIN TG+GDDF+R LE VSGG++S+T VL+LGIFAVAHSGLASLRPKGEE+IGARAWRVLFGVVSLPLALS +VYFINHRYDG+ LW++K VPGVHD WI++F+SFFFLYPSTFNLLEVAAVDKP+LH+WETG++RITRHPQFVGQ +WC AH W+GTSFT + S+MLM HH FA+WNGDRRL DK+GEAFE VK RTS +PFQA+IEGRQ+LP DY E+ARGPY +I T+GAY+ HPFMQAGSW+L W
Sbjct: 59 LQLSTRDIEELQDASGLIGEDAAAFSLQEQKLASWISFGGVFTVVMAALWYLWINESTGYGDDFIRALESVSGGNSSVTIVLLLGIFAVAHSGLASLRPKGEEIIGARAWRVLFGVVSLPLALSCLVYFINHRYDGVALWNLKGVPGVHDFCWISSFISFFFLYPSTFNLLEVAAVDKPQLHMWETGVMRITRHPQFVGQGIWCLAHALWVGTSFTLLTSAMLMGHHLFAVWNGDRRLADKYGEAFEKVKARTSVMPFQAVIEGRQKLPADYWKEWARGPYAIIAAGTVGAYYLHPFMQAGSWTLHW 365
BLAST of mRNA_S-ischiensis_contig115.2462.1 vs. uniprot
Match: D7FMZ6_ECTSI (NnrU domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMZ6_ECTSI) HSP 1 Score: 478 bits (1229), Expect = 6.530e-162 Identity = 224/296 (75.68%), Postives = 259/296 (87.50%), Query Frame = 2
Query: 53 RPRGRSSEPWWPLAMSARDMDQLQRGSGLVGEDSAYFSMEEQTLQAWGSFLAVLGTVLTALYFLWINPDTGFGDDFVRVLEDVSGGDTSITAVLILGIFAVAHSGLASLRPKGEELIGARAWRVLFGVVSLPLALSAVVYFINHRYDGIHLWDIKTVPGVHDLLWITNFLSFFFLYPSTFNLLEVAAVDKPKLHLWETGIIRITRHPQFVGQAMWCGAHLAWIGTSFTAVVSSMLMAHHAFAIWNGDRRLRDKHGEAFEAVKERTSFVPFQAIIEGRQQLPEDYASEFARGPYLLI 940
R RG S P LAMSA +++ LQR SGLVGED+A FS EEQ+L++WG+FLAVLGTVLTALY+LW+ P+TG+GDDFVR LE +SGGD++IT LILG+FAVAHSGLASLRPKGEELIGARAWRVLFGVVSLPLA++AV YFINHRYDG+ LW+IK VPGVHD WIT+F+SF FLYPSTFNLLEVAAVDKP+LHLWETG+ RITRHPQ GQA+WC AHLAW+GTSFTAV S+ LMAHH F++WNGDRRL++K+G+ FEAV+ERTS VPFQAI EGRQQLP DY EFARGPY +I
Sbjct: 6 RHRGSSVNP---LAMSASELEDLQRQSGLVGEDAAVFSFEEQSLKSWGAFLAVLGTVLTALYYLWLKPETGYGDDFVRFLEGLSGGDSTITVTLILGVFAVAHSGLASLRPKGEELIGARAWRVLFGVVSLPLAVTAVAYFINHRYDGVQLWNIKMVPGVHDACWITSFISFVFLYPSTFNLLEVAAVDKPQLHLWETGVTRITRHPQTFGQALWCAAHLAWVGTSFTAVTSAGLMAHHLFSLWNGDRRLKEKYGDDFEAVRERTSAVPFQAIFEGRQQLPSDYWKEFARGPYFII 298
BLAST of mRNA_S-ischiensis_contig115.2462.1 vs. uniprot
Match: A0A7S3YAC1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YAC1_HETAK) HSP 1 Score: 421 bits (1081), Expect = 2.960e-139 Identity = 195/335 (58.21%), Postives = 240/335 (71.64%), Query Frame = 2
Query: 47 DVRPRGRSSEPWWPLAMSARDMD--------------QLQRGSGLVGEDSAYFSMEEQTLQAWGSFLAVLGTVLTALYFLWINPDTGFGDDFVRVLEDVSGGDTSITAVLILGIFAVAHSGLASLRPKGEELIGARAWRVLFGVVSLPLALSAVVYFINHRYDGIHLWDIKTVPGVHDLLWITNFLSFFFLYPSTFNLLEVAAVDKPKLHLWETGIIRITRHPQFVGQAMWCGAHLAWIGTSFTAVVSSMLMAHHAFAIWNGDRRLRDKHGEAFEAVKERTSFVPFQAIIEGRQQLPEDYASEFARGPYLLITVLTIGAYFAHPFMQAGSWSLQW 1009
+VR S E W L++ R Q LVGED+A F Q +Q+WG F ++ +VL LY WI DTGFGDD++R+LE ++GGD+ + ++L IF V HSGLASLR KGE +IGARAWRVLF + SLPLALSAVVYFINHRYDG LW ++ PG+H L W +F+SF FLYPSTFNLLEVAAVD+P+ HLWETG+ R+TRHPQ VGQ +WC AH W+GTSF V ++ LMAHH FA W+GDRRL ++HG+AF VKERTS +PFQAI+EGRQQLP+DY EF RGPYL++TV T+GAYFAHP+MQA S+ QW
Sbjct: 37 NVRSYANSQEARWQLSLPIRTRSSSSGLLRFEKSLPAQADPTQELVGEDAAVFEFSNQKIQSWGIFSVLVTSVLGLLYVTWIKADTGFGDDYIRLLESIAGGDSHVVMGMLLTIFGVVHSGLASLRTKGESIIGARAWRVLFALASLPLALSAVVYFINHRYDGALLWSLRDFPGMHGLCWALSFVSFLFLYPSTFNLLEVAAVDRPEQHLWETGVARVTRHPQAVGQGLWCLAHTLWVGTSFMCVATAGLMAHHLFACWHGDRRLEERHGDAFRRVKERTSIMPFQAILEGRQQLPQDYYKEFLRGPYLIVTVATVGAYFAHPYMQAYSYLTQW 371
BLAST of mRNA_S-ischiensis_contig115.2462.1 vs. uniprot
Match: A0A8J4AM61_9CHLO (NnrU domain-containing protein n=2 Tax=Volvox TaxID=3066 RepID=A0A8J4AM61_9CHLO) HSP 1 Score: 416 bits (1068), Expect = 1.960e-137 Identity = 187/291 (64.26%), Postives = 234/291 (80.41%), Query Frame = 2
Query: 137 LVGEDSAYFSMEEQTLQAWGSFLAVLGTVLTALYFLWINPDTGFGDDFVRVLEDVSGGDTSITAVLILGIFAVAHSGLASLRPKGEELIGARAWRVLFGVVSLPLALSAVVYFINHRYDGIHLWDIKTVPGVHDLLWITNFLSFFFLYPSTFNLLEVAAVDKPKLHLWETGIIRITRHPQFVGQAMWCGAHLAWIGTSFTAVVSSMLMAHHAFAIWNGDRRLRDKHGEAFEAVKERTSFVPFQAIIEGRQQLPEDYASEFARGPYLLITVLTIGAYFAHPFMQAGSWSLQW 1009
++GED+A F +E+Q +++W F +L TVL ALY +WI P G DD++ ++ ++G + IT LIL FA+AHSGLA LRP GEE+IGARA+RV+F +VSLPLA+ A+VYFINHRYDG+ LWD++ VPGVH+L+W+ NF+SF+FLYPSTFN+LEVAAVDKPKLHLWETGI+RITRHPQ VGQA+WC AH WIG+SF V S+ LMAHH F W+GDRRL+ K+G+AFEAVK RTS VPF AI++GRQ+LP DY EFAR PY +T LTIGAY AHP MQA S+SL+W
Sbjct: 73 MIGEDAAVFDIEKQNIKSWALFTVLLSTVLGALYLVWIQPGVGLADDYLAAIQSIAGS-SEITITLILLFFAIAHSGLAGLRPYGEEVIGARAYRVIFALVSLPLAIVAIVYFINHRYDGVPLWDVRGVPGVHELVWVLNFISFWFLYPSTFNILEVAAVDKPKLHLWETGIMRITRHPQMVGQAIWCAAHTMWIGSSFMVVTSACLMAHHLFGCWHGDRRLKAKYGDAFEAVKARTSVVPFAAILDGRQKLPADYWKEFARMPYFTVTALTIGAYLAHPLMQAASFSLKW 362
BLAST of mRNA_S-ischiensis_contig115.2462.1 vs. uniprot
Match: A0A835XZY9_9CHLO (NnrU domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XZY9_9CHLO) HSP 1 Score: 410 bits (1054), Expect = 2.340e-135 Identity = 189/306 (61.76%), Postives = 236/306 (77.12%), Query Frame = 2
Query: 92 AMSARDMDQLQRGSGLVGEDSAYFSMEEQTLQAWGSFLAVLGTVLTALYFLWINPDTGFGDDFVRVLEDVSGGDTSITAVLILGIFAVAHSGLASLRPKGEELIGARAWRVLFGVVSLPLALSAVVYFINHRYDGIHLWDIKTVPGVHDLLWITNFLSFFFLYPSTFNLLEVAAVDKPKLHLWETGIIRITRHPQFVGQAMWCGAHLAWIGTSFTAVVSSMLMAHHAFAIWNGDRRLRDKHGEAFEAVKERTSFVPFQAIIEGRQQLPEDYASEFARGPYLLITVLTIGAYFAHPFMQAGSWSLQW 1009
A S D + LVGEDSA F + +Q+LQ+WG F +L TVL ALY +WI P GF DD++ LE + G+ T LIL +FA+AHSGLA LRP GE++IGARA+RV+F +VSLPLAL ++VYFINHRYDG+ LWD++ VPGVH L+WI NF+SF+FLYPSTFN+LEVAAVD+PKLHLWETGI+RITRHPQ VGQ +WC AH W+G+S V S+ LMAHH F W+GDRRL+ K+G+AFEAVK RTS +PF AI +GRQQLP DY EF R PY+ IT+LT+GAY+AHP MQ+ +++L W
Sbjct: 56 ASSETDASTSASTAPLVGEDSAAFDLSKQSLQSWGLFTVLLSTVLGALYLVWIQP-AGFADDYLAALESWTSGNPEATMALILLVFAIAHSGLAGLRPYGEKVIGARAYRVIFALVSLPLALVSIVYFINHRYDGVALWDVRDVPGVHSLVWIVNFISFYFLYPSTFNILEVAAVDEPKLHLWETGIMRITRHPQMVGQGLWCAAHTLWVGSSVMLVASAGLMAHHLFGCWHGDRRLKAKYGDAFEAVKARTSVLPFAAIADGRQQLPADYWKEFLRMPYVAITILTLGAYWAHPIMQSAAFNLHW 360
BLAST of mRNA_S-ischiensis_contig115.2462.1 vs. uniprot
Match: A0A7S4G126_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4G126_9EUGL) HSP 1 Score: 414 bits (1064), Expect = 2.630e-135 Identity = 194/289 (67.13%), Postives = 228/289 (78.89%), Query Frame = 2
Query: 143 GEDSAYFSMEEQTLQAWGSFLAVLGTVLTALYFLWINPDTGFGDDFVRVLEDVSGGDTSITAVLILGIFAVAHSGLASLRPKGEELIGARAWRVLFGVVSLPLALSAVVYFINHRYDGIHLWDIKTVPGVHDLLWITNFLSFFFLYPSTFNLLEVAAVDKPKLHLWETGIIRITRHPQFVGQAMWCGAHLAWIGTSFTAVVSSMLMAHHAFAIWNGDRRLRDKHGEAFEAVKERTSFVPFQAIIEGRQQLPEDYASEFARGPYLLITVLTIGAYFAHPFMQAGSWSLQW 1009
GED+A F++ +Q + W F+AVL TVL L+ +WI P TG D+FV LE + GG+T T +LIL IF +AHSGLA LRPKGE +IG RA+RVLFG+VSLPLA+ A+VYFINHRYDG LWDIK VPGVH +WI F+SF FLYPSTFNLLE+AAV+KPKLH+WETGI+RITRHPQFVGQ +WC AH AWIG+SF V S LMAHH F +W+GDRRL K+GEAFE VK RTS PF AI++GRQQLP+DY EFARGPYL I V T+GAYFAHP MQ GS+SL W
Sbjct: 178 GEDAAAFTLSDQRTEDWVKFVAVLVTVLGGLFVVWIYPPTGLADEFVDALEGLMGGNTEATMMLILVIFGIAHSGLAGLRPKGEAIIGERAYRVLFGLVSLPLAILALVYFINHRYDGTLLWDIKGVPGVHSAVWILTFISFIFLYPSTFNLLEIAAVEKPKLHMWETGIMRITRHPQFVGQGLWCIAHTAWIGSSFAVVTSIGLMAHHTFGVWHGDRRLFAKYGEAFEEVKARTSIWPFAAILDGRQQLPKDYWLEFARGPYLAIVVGTVGAYFAHPLMQLGSYSLHW 466
BLAST of mRNA_S-ischiensis_contig115.2462.1 vs. uniprot
Match: A0A0G4ECX7_VITBC (NnrU domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4ECX7_VITBC) HSP 1 Score: 408 bits (1048), Expect = 2.070e-134 Identity = 191/322 (59.32%), Postives = 241/322 (74.84%), Query Frame = 2
Query: 41 PGDVRPRGRSSEPWWPLAMSARDMDQLQRGSGLVGEDSAYFSMEEQTLQAWGSFLAVLGTVLTALYFLWINPDTGFGDDFVRVLEDVSGGDTSITAVLILGIFAVAHSGLASLRPKGEELIGARAWRVLFGVVSLPLALSAVVYFINHRYDGIHLWDIKTVPGVHDLLWITNFLSFFFLYPSTFNLLEVAAVDKPKLHLWETGIIRITRHPQFVGQAMWCGAHLAWIGTSFTAVVSSMLMAHHAFAIWNGDRRLRDKHGEAFEAVKERTSFVPFQAIIEGRQQLPEDYASEFARGPYLLITVLTIGAYFAHPFMQAGSWSLQ 1006
P RPR +P + A D+ G VGED+A F +EEQ+L++WG F +L TVL ALY WI+P+TGFG D++R+LE S + L +GIFAVAHSGLASLRP+ E +IGARAWRV+F ++SLPLA SA+ YFINHRYDG+ LWD++ VPGVH+++W + +SFFFLYPSTFNLLEVAAVDKP+LHLWE+G++RITRHPQ VGQ +WC AH WIG SFT S +LMAHH F +W+GD+RLR K+GEAF+ V+ RTS VPF A+I+GRQ+LP+DY EF R PY ++ T+GAY+AHPFMQA SW Q
Sbjct: 43 PTQERPRHHVFQP---VRFEATREDRAADAVGFVGEDAARFDLEEQSLKSWGIFSVLLVTVLGALYVSWISPETGFGKDYLRLLESTSDSPEVVMTEL-MGIFAVAHSGLASLRPRMEGIIGARAWRVVFALMSLPLAFSAIAYFINHRYDGVQLWDLRNVPGVHEVVWGLSLVSFFFLYPSTFNLLEVAAVDKPQLHLWESGVMRITRHPQMVGQGLWCLAHTLWIGNSFTLWTSVLLMAHHLFGVWHGDQRLRAKYGEAFDQVQRRTSVVPFAAVIDGRQRLPDDYWKEFVRLPYAVVLAATLGAYWAHPFMQAYSWQSQ 360
BLAST of mRNA_S-ischiensis_contig115.2462.1 vs. uniprot
Match: A0A061R8M7_9CHLO (Zeta-carotene isomerase n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R8M7_9CHLO) HSP 1 Score: 401 bits (1031), Expect = 1.010e-131 Identity = 186/291 (63.92%), Postives = 222/291 (76.29%), Query Frame = 2
Query: 137 LVGEDSAYFSMEEQTLQAWGSFLAVLGTVLTALYFLWINPDTGFGDDFVRVLEDVSGGDTSITAVLILGIFAVAHSGLASLRPKGEELIGARAWRVLFGVVSLPLALSAVVYFINHRYDGIHLWDIKTVPGVHDLLWITNFLSFFFLYPSTFNLLEVAAVDKPKLHLWETGIIRITRHPQFVGQAMWCGAHLAWIGTSFTAVVSSMLMAHHAFAIWNGDRRLRDKHGEAFEAVKERTSFVPFQAIIEGRQQLPEDYASEFARGPYLLITVLTIGAYFAHPFMQAGSWSLQW 1009
LVGEDSA F +++QTLQAWG F +L TVL LY +WI P GF DD+VR+L + +T T ++ILG+FAVAHSGLA LR KGE ++G RA+RV+F +VSL LA+ A+VYFINHRY G LWD++ P VH+ +W TNF+SF FLYPSTFN+LEVAAVDKPK+HLWETGIIRITRHPQ VGQA+WC AH WIG SF S LMAHH F W+GDRRLR ++GEAFEAVK RTS VPF AI++GRQQLP+DY EFAR PYL +T T+GAY HP Q S+ L W
Sbjct: 82 LVGEDSAAFDLQKQTLQAWGLFFLLLSTVLGGLYEVWIQPGYGFADDYVRLLTSFTKDNTEATMLVILGVFAVAHSGLAGLRAKGEAVVGERAYRVVFALVSLSLAIVALVYFINHRYSGTPLWDLRGTPLVHEAVWATNFVSFLFLYPSTFNILEVAAVDKPKVHLWETGIIRITRHPQMVGQALWCLAHTLWIGNSFMVTTSLGLMAHHLFGCWHGDRRLRSRYGEAFEAVKSRTSIVPFAAILDGRQQLPKDYWKEFARVPYLAVTAFTVGAYLCHPLFQQASYFLGW 372
BLAST of mRNA_S-ischiensis_contig115.2462.1 vs. uniprot
Match: A0A833VUZ3_9POAL (15-cis-zeta-carotene isomerase n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833VUZ3_9POAL) HSP 1 Score: 399 bits (1026), Expect = 4.820e-131 Identity = 184/306 (60.13%), Postives = 234/306 (76.47%), Query Frame = 2
Query: 92 AMSARDMDQLQRGSGLVGEDSAYFSMEEQTLQAWGSFLAVLGTVLTALYFLWINPDTGFGDDFVRVLEDVSGGDTSITAVLILGIFAVAHSGLASLRPKGEELIGARAWRVLFGVVSLPLALSAVVYFINHRYDGIHLWDIKTVPGVHDLLWITNFLSFFFLYPSTFNLLEVAAVDKPKLHLWETGIIRITRHPQFVGQAMWCGAHLAWIGTSFTAVVSSMLMAHHAFAIWNGDRRLRDKHGEAFEAVKERTSFVPFQAIIEGRQQLPEDYASEFARGPYLLITVLTIGAYFAHPFMQAGSWSLQW 1009
++ +R+ D L+GEDSA F + EQ L +W F +LG+VL AL FLWINP TGFG FV + ++SG +T ++++ IFA HSGLASLR +GE+LIG RA+RVLF +SLPLA+S VVYFINHRYDG LW ++ VPGVH+L+W ++F+SFFFLYPSTFNLLEVAAVDKPK+HLWETGI+RITRHPQ VGQ +WC AH WIG + S L+AHH F +WNGDRRL ++G++FE +K+RTS +PF AI++GRQ+LPEDY EF R PY+ ITVLT+GAYFAHP MQ+ S++L W
Sbjct: 63 SVGSRETDDPIPDESLLGEDSAAFQLSEQKLSSWVYFTVILGSVLLALNFLWINPSTGFGTAFVDSISNISGSP-EVTMLVLMAIFATVHSGLASLRDQGEKLIGERAFRVLFAGISLPLAVSTVVYFINHRYDGTQLWQVQAVPGVHELVWFSSFVSFFFLYPSTFNLLEVAAVDKPKMHLWETGIMRITRHPQMVGQVIWCLAHSLWIGKTVAISASVGLIAHHLFGVWNGDRRLSIRYGKSFEVLKKRTSVIPFVAILDGRQKLPEDYYKEFLRLPYVAITVLTLGAYFAHPLMQSSSYNLHW 367
BLAST of mRNA_S-ischiensis_contig115.2462.1 vs. uniprot
Match: A0A3S3NGG2_9MAGN (15-cis-zeta-carotene isomerase n=2 Tax=Cinnamomum TaxID=13428 RepID=A0A3S3NGG2_9MAGN) HSP 1 Score: 397 bits (1021), Expect = 3.450e-130 Identity = 187/294 (63.61%), Postives = 223/294 (75.85%), Query Frame = 2
Query: 128 GSGLVGEDSAYFSMEEQTLQAWGSFLAVLGTVLTALYFLWINPDTGFGDDFVRVLEDVSGGDTSITAVLILGIFAVAHSGLASLRPKGEELIGARAWRVLFGVVSLPLALSAVVYFINHRYDGIHLWDIKTVPGVHDLLWITNFLSFFFLYPSTFNLLEVAAVDKPKLHLWETGIIRITRHPQFVGQAMWCGAHLAWIGTSFTAVVSSMLMAHHAFAIWNGDRRLRDKHGEAFEAVKERTSFVPFQAIIEGRQQLPEDYASEFARGPYLLITVLTIGAYFAHPFMQAGSWSLQW 1009
G + GEDSA F + EQ L +W F +LGTVL AL F+WI+P TGFG FV + +S + VLI IFA+AHSG+AS R GE+LIG RA+RVLF +SLPLAL+ +VYFINHRYDGI LWD+K+VPGVH+L+WI+NF+SF FLYPSTFNLLEVAAVDKPK+HLWETGI+RITRHPQ GQ +WC AHL WIG S A S L+ HH F +WNGDRRL ++G+AFE VK RTS +PF AI+ GRQ LP+DY EF R PYL ITVLT+GAYFAHP M+A S+ L W
Sbjct: 82 GFPVGGEDSAAFDLGEQKLSSWVYFSGILGTVLFALNFVWIDPKTGFGTAFVDAVAGISESHEIVMLVLI-AIFALAHSGMASFRDAGEKLIGERAYRVLFAGISLPLALTTIVYFINHRYDGIQLWDVKSVPGVHELVWISNFISFLFLYPSTFNLLEVAAVDKPKMHLWETGIMRITRHPQMAGQVVWCLAHLLWIGNSVVAAASFGLIGHHLFGVWNGDRRLASRYGKAFEVVKSRTSIIPFAAILSGRQNLPKDYYKEFFRLPYLTITVLTLGAYFAHPLMRAASFGLHW 374 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig115.2462.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig115.2462.1 >prot_S-ischiensis_contig115.2462.1 ID=prot_S-ischiensis_contig115.2462.1|Name=mRNA_S-ischiensis_contig115.2462.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=327bp MRLPGDVRPRGRSSEPWWPLAMSARDMDQLQRGSGLVGEDSAYFSMEEQTback to top mRNA from alignment at S-ischiensis_contig115:22756..29826+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig115.2462.1 ID=mRNA_S-ischiensis_contig115.2462.1|Name=mRNA_S-ischiensis_contig115.2462.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=7071bp|location=Sequence derived from alignment at S-ischiensis_contig115:22756..29826+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig115:22756..29826+ >mRNA_S-ischiensis_contig115.2462.1 ID=mRNA_S-ischiensis_contig115.2462.1|Name=mRNA_S-ischiensis_contig115.2462.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1962bp|location=Sequence derived from alignment at S-ischiensis_contig115:22756..29826+ (Schizocladia ischiensis KU_0333)back to top |