mRNA_S-ischiensis_contig110.2420.1 (mRNA) Schizocladia ischiensis KU_0333
|
Overview
Homology
BLAST of mRNA_S-ischiensis_contig110.2420.1 vs. uniprot
Match: A0A858LFZ1_9STRA (Ribulose bisphosphate carboxylase large chain n=9 Tax=Ochrophyta TaxID=2696291 RepID=A0A858LFZ1_9STRA) HSP 1 Score: 917 bits (2369), Expect = 0.000e+0 Identity = 443/488 (90.78%), Postives = 474/488 (97.13%), Query Frame = 2
Query: 95 MPENVQERTRLKSERYESGVIPYAKMGYWDADYVVKDTDLLALFRLTPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGTTDQFFAYISYECDLFEEGSLANMTASIIGNVFGFKALKALRLEDMRIPFAYLKTFQGPATGLIVERERLDKFGRPFLGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRWQERFLYTMEGVNRSSAATGEVKGSYLNVTAATIEQMYERAEFAKGVGTVIVMIDLVIGYTAIQTMAIWARKADMILHLHRAGNSTYARQKNHGINFRVICKWMRMAGVDHIHAGTVVGKLEGDPLMVKGFYNTLLLTELKVNLSQGIFYDMSWASLRKVVPVASGGIHCGQMHQLVYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALESMILARNEGRDYLNDGPEILRDAAKLCGPLKTALDLWKDITFNYTSTDTPDFVETATESK 1558
M +NVQERTR+KSERYESGVIPYAKMGYWDADY +K TD+LALFR+TPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGTTDQFFAYI+YEC+LFEEGSLAN+TASIIGNVFGFKA+KALRLEDMRIPF+YLKTFQGPATGLIVERER+DKFGRP LGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRW+ERFLY MEGVNR+SAATGEVKGSYLN TAATIE+MYERA +AK +G++I+M+DLVIGYTAIQTMAIWARK DMILHLHRAGNSTYARQKNHGINFRVICKWMRM+GVDHIHAGTVVGKLEGDPLMVKGFYNTLL T+L +NLSQG+F+DM WASLRKVVPVASGGIHCGQMHQL+YYLGDDVVLQFGGGTIGHPDGIQAGATANRVALE+M+LARNEGRDYLN+GP+ILRDAAK CGPLKTALDLWKDITF+YTSTDTPDFVE ATESK
Sbjct: 1 MSKNVQERTRIKSERYESGVIPYAKMGYWDADYNIKHTDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGTTDQFFAYIAYECELFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIPFSYLKTFQGPATGLIVERERMDKFGRPLLGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRWRERFLYCMEGVNRASAATGEVKGSYLNTTAATIEEMYERALYAKEIGSIIIMVDLVIGYTAIQTMAIWARKHDMILHLHRAGNSTYARQKNHGINFRVICKWMRMSGVDHIHAGTVVGKLEGDPLMVKGFYNTLLETKLSINLSQGLFFDMDWASLRKVVPVASGGIHCGQMHQLLYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALEAMVLARNEGRDYLNEGPQILRDAAKTCGPLKTALDLWKDITFDYTSTDTPDFVEVATESK 488
BLAST of mRNA_S-ischiensis_contig110.2420.1 vs. uniprot
Match: B8LGQ9_9STRA (Ribulose bisphosphate carboxylase large chain n=186 Tax=root TaxID=1 RepID=B8LGQ9_9STRA) HSP 1 Score: 908 bits (2346), Expect = 0.000e+0 Identity = 438/488 (89.75%), Postives = 469/488 (96.11%), Query Frame = 2
Query: 95 MPENVQERTRLKSERYESGVIPYAKMGYWDADYVVKDTDLLALFRLTPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGTTDQFFAYISYECDLFEEGSLANMTASIIGNVFGFKALKALRLEDMRIPFAYLKTFQGPATGLIVERERLDKFGRPFLGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRWQERFLYTMEGVNRSSAATGEVKGSYLNVTAATIEQMYERAEFAKGVGTVIVMIDLVIGYTAIQTMAIWARKADMILHLHRAGNSTYARQKNHGINFRVICKWMRMAGVDHIHAGTVVGKLEGDPLMVKGFYNTLLLTELKVNLSQGIFYDMSWASLRKVVPVASGGIHCGQMHQLVYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALESMILARNEGRDYLNDGPEILRDAAKLCGPLKTALDLWKDITFNYTSTDTPDFVETATESK 1558
M +NVQERTR+KSERYESGVIPYAKMGYWDADY + TD+LALFR+TPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGTTDQFFAYI+Y+C+LFEEGSLAN+TASIIGNVFGFKA+KALRLEDMRIPFAYLKTFQGPATGL+VERER+DKFGRPFLGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRW+ERFLY MEG+NR++A+TGEVKGSYLNVTA +E MYERAE+AK +G++IVMIDLVIGYTAIQ+M IWARK DMILHLHRAGNSTYARQKNHGINFRVICKWMRMAGVDHIHAGTVVGKLEGDPLMVKGFYNTLL T L +NL QGIF++M WA LRK VPVASGGIHCGQMHQL YYLGDDVVLQFGGGTIGHPDGIQAGATANRVALESM+LARNEGRDYLN+GP+ILRDAAK+CGPLKTALDLWKDITF+YTSTDTPDFVETATESK
Sbjct: 1 MSKNVQERTRIKSERYESGVIPYAKMGYWDADYNIAHTDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGTTDQFFAYIAYQCELFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIPFAYLKTFQGPATGLVVERERMDKFGRPFLGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRWRERFLYCMEGINRAAASTGEVKGSYLNVTAGNMEDMYERAEYAKVIGSIIVMIDLVIGYTAIQSMGIWARKNDMILHLHRAGNSTYARQKNHGINFRVICKWMRMAGVDHIHAGTVVGKLEGDPLMVKGFYNTLLQTTLDINLPQGIFFEMDWALLRKTVPVASGGIHCGQMHQLTYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALESMVLARNEGRDYLNEGPQILRDAAKMCGPLKTALDLWKDITFDYTSTDTPDFVETATESK 488
BLAST of mRNA_S-ischiensis_contig110.2420.1 vs. uniprot
Match: Q8HSH1_9STRA (Ribulose bisphosphate carboxylase large chain n=106 Tax=root TaxID=1 RepID=Q8HSH1_9STRA) HSP 1 Score: 906 bits (2341), Expect = 0.000e+0 Identity = 436/488 (89.34%), Postives = 473/488 (96.93%), Query Frame = 2
Query: 95 MPENVQERTRLKSERYESGVIPYAKMGYWDADYVVKDTDLLALFRLTPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGTTDQFFAYISYECDLFEEGSLANMTASIIGNVFGFKALKALRLEDMRIPFAYLKTFQGPATGLIVERERLDKFGRPFLGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRWQERFLYTMEGVNRSSAATGEVKGSYLNVTAATIEQMYERAEFAKGVGTVIVMIDLVIGYTAIQTMAIWARKADMILHLHRAGNSTYARQKNHGINFRVICKWMRMAGVDHIHAGTVVGKLEGDPLMVKGFYNTLLLTELKVNLSQGIFYDMSWASLRKVVPVASGGIHCGQMHQLVYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALESMILARNEGRDYLNDGPEILRDAAKLCGPLKTALDLWKDITFNYTSTDTPDFVETATESK 1558
M ++VQERTR+KS+RYESGVIPYAKMGYWDA Y VK TD+LALFR+TPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGTTDQ+FAYISY+C+LFEEGSLAN+TASIIGNVFGFKA+KALRLEDMRIPFAYLKTFQGPATGL+VERER+DKFGRPFLGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRW+ERFLY MEGVNR++AATGE+KGSYLN TA T+E+MYERAE+AK +GT+IVMIDLV+GYTAIQ+MAIWARKADMILHLHRAGNSTYARQKNHGINFRVICKWMRMAGVDHIHAGTVVGKLEGDPLMVKGFYNTLL T+L +NL QG+F++M WA+LRK VPVASGGIHCGQMHQL+YYLGDDVVLQFGGGTIGHPDGIQAGATANRVALE+M+LARNEGRDYLN+GP+ILRDAAK CGPLKTALDLWKDITF+YTSTDTPDFVE AT+SK
Sbjct: 1 MSKSVQERTRIKSQRYESGVIPYAKMGYWDAFYNVKHTDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGTTDQYFAYISYQCELFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIPFAYLKTFQGPATGLVVERERMDKFGRPFLGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRWRERFLYCMEGVNRAAAATGEIKGSYLNTTAGTMEEMYERAEYAKQLGTIIVMIDLVVGYTAIQSMAIWARKADMILHLHRAGNSTYARQKNHGINFRVICKWMRMAGVDHIHAGTVVGKLEGDPLMVKGFYNTLLETKLDINLPQGLFFEMEWAALRKTVPVASGGIHCGQMHQLLYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALEAMVLARNEGRDYLNEGPQILRDAAKTCGPLKTALDLWKDITFDYTSTDTPDFVEIATKSK 488
BLAST of mRNA_S-ischiensis_contig110.2420.1 vs. uniprot
Match: RBL_ECTSI (Ribulose bisphosphate carboxylase large chain n=2255 Tax=PX clade TaxID=569578 RepID=RBL_ECTSI) HSP 1 Score: 904 bits (2336), Expect = 0.000e+0 Identity = 434/488 (88.93%), Postives = 471/488 (96.52%), Query Frame = 2
Query: 95 MPENVQERTRLKSERYESGVIPYAKMGYWDADYVVKDTDLLALFRLTPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGTTDQFFAYISYECDLFEEGSLANMTASIIGNVFGFKALKALRLEDMRIPFAYLKTFQGPATGLIVERERLDKFGRPFLGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRWQERFLYTMEGVNRSSAATGEVKGSYLNVTAATIEQMYERAEFAKGVGTVIVMIDLVIGYTAIQTMAIWARKADMILHLHRAGNSTYARQKNHGINFRVICKWMRMAGVDHIHAGTVVGKLEGDPLMVKGFYNTLLLTELKVNLSQGIFYDMSWASLRKVVPVASGGIHCGQMHQLVYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALESMILARNEGRDYLNDGPEILRDAAKLCGPLKTALDLWKDITFNYTSTDTPDFVETATESK 1558
MPE+VQ RTR+KSERYESGVIPYAKMGYWDADY +KDTD+LALFR+TPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGT+DQFFAYI+YECDLFEEGSLAN+TASIIGNVFGFKA+KALRLEDMRIP+AYLKTFQGPATG++VERERLDKFGRPFLGATVKPKLGLSGKNYGRVVYEGL GGLDFLKDDENINSQPFMRW+ERFLY MEGVNR++AATGEVKGSYLN+TAAT+EQMYERAE+A +G+VIVMIDLVIGYTAIQ+MAIWARKA++ILHLHRAGNSTYARQKNHGINFRVICKWMRM GVDHIHAGTVVGKLEGDPLMVKGFYN+LLLT LK+NL++G+F+DM WASLRK VPVASGGIHCGQMHQL+YYLGDDVVLQFGGGTIGHPDGIQ+GATANRVALESM+LARNEGRDY+ +GP+ILR AA CGPLK ALDLWKDITF+YTSTDTPDFVE AT S+
Sbjct: 1 MPEDVQNRTRIKSERYESGVIPYAKMGYWDADYKLKDTDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGTSDQFFAYIAYECDLFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIPYAYLKTFQGPATGVVVERERLDKFGRPFLGATVKPKLGLSGKNYGRVVYEGLTGGLDFLKDDENINSQPFMRWKERFLYCMEGVNRAAAATGEVKGSYLNITAATVEQMYERAEYAHAIGSVIVMIDLVIGYTAIQSMAIWARKAEVILHLHRAGNSTYARQKNHGINFRVICKWMRMCGVDHIHAGTVVGKLEGDPLMVKGFYNSLLLTHLKINLAEGLFFDMDWASLRKCVPVASGGIHCGQMHQLLYYLGDDVVLQFGGGTIGHPDGIQSGATANRVALESMVLARNEGRDYVGEGPDILRRAASTCGPLKAALDLWKDITFDYTSTDTPDFVEVATGSR 488
BLAST of mRNA_S-ischiensis_contig110.2420.1 vs. uniprot
Match: RBL_OLILU (Ribulose bisphosphate carboxylase large chain n=38 Tax=root TaxID=1 RepID=RBL_OLILU) HSP 1 Score: 886 bits (2290), Expect = 0.000e+0 Identity = 431/487 (88.50%), Postives = 461/487 (94.66%), Query Frame = 2
Query: 95 MPENVQERTRLKSERYESGVIPYAKMGYWDADYVVKDTDLLALFRLTPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGTTDQFFAYISYECDLFEEGSLANMTASIIGNVFGFKALKALRLEDMRIPFAYLKTFQGPATGLIVERERLDKFGRPFLGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRWQERFLYTMEGVNRSSAATGEVKGSYLNVTAATIEQMYERAEFAKGVGTVIVMIDLVIGYTAIQTMAIWARKADMILHLHRAGNSTYARQKNHGINFRVICKWMRMAGVDHIHAGTVVGKLEGDPLMVKGFYNTLLLTELKVNLSQGIFYDMSWASLRKVVPVASGGIHCGQMHQLVYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALESMILARNEGRDYLNDGPEILRDAAKLCGPLKTALDLWKDITFNYTSTDTPDFVETATES 1555
M NV ER R+K++RYESGVIPYAKMGYWDA+Y VKDTDLLALFRLTPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACD+YRAKAYRVDPVP DQ+FAYI+YECDLFEEGSLANMTASIIGNVFGFKA+ ALRLEDMRIP+AYLKTFQGPATG+IVERERLD FGRP LGATVKPKLGLSGKNYGRVVYEGLRGG+DFLKDDENINSQPFMRW+ERFLY MEG+NR+SAA+GEVKGSYLNVTAAT+E+MYERA++AK VG+VIVMIDLVIGYTAIQ+MAIWARK DMILHLHRAGNSTYARQKNHGINFRVICKWMRMAGVDHIHAGTVVGKLEGDPLMVKGFY+ L TEL +NL QGIF++M WASLRK PVASGGIHCGQMHQLVYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALE+MILARNEGRDY+++GPEILRD AKLCGPLKTALDLWK ITFNYTSTDT DFVETAT +
Sbjct: 1 MSNNVYERNRIKNDRYESGVIPYAKMGYWDANYSVKDTDLLALFRLTPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDVYRAKAYRVDPVPSAADQYFAYIAYECDLFEEGSLANMTASIIGNVFGFKAVAALRLEDMRIPYAYLKTFQGPATGIIVERERLDTFGRPLLGATVKPKLGLSGKNYGRVVYEGLRGGIDFLKDDENINSQPFMRWRERFLYCMEGINRASAASGEVKGSYLNVTAATMEEMYERADYAKAVGSVIVMIDLVIGYTAIQSMAIWARKNDMILHLHRAGNSTYARQKNHGINFRVICKWMRMAGVDHIHAGTVVGKLEGDPLMVKGFYDVLRETELSINLPQGIFFEMDWASLRKCCPVASGGIHCGQMHQLVYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALEAMILARNEGRDYVSEGPEILRDIAKLCGPLKTALDLWKGITFNYTSTDTADFVETATSN 487
BLAST of mRNA_S-ischiensis_contig110.2420.1 vs. uniprot
Match: A0A3R5QND5_9STRA (Ribulose bisphosphate carboxylase large chain n=93 Tax=Eukaryota TaxID=2759 RepID=A0A3R5QND5_9STRA) HSP 1 Score: 868 bits (2242), Expect = 7.730e-313 Identity = 417/486 (85.80%), Postives = 460/486 (94.65%), Query Frame = 2
Query: 95 MPENVQERTRLKSERYESGVIPYAKMGYWDADYVVKDTDLLALFRLTPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGTTDQFFAYISYECDLFEEGSLANMTASIIGNVFGFKALKALRLEDMRIPFAYLKTFQGPATGLIVERERLDKFGRPFLGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRWQERFLYTMEGVNRSSAATGEVKGSYLNVTAATIEQMYERAEFAKGVGTVIVMIDLVIGYTAIQTMAIWARKADMILHLHRAGNSTYARQKNHGINFRVICKWMRMAGVDHIHAGTVVGKLEGDPLMVKGFYNTLLLTELKVNLSQGIFYDMSWASLRKVVPVASGGIHCGQMHQLVYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALESMILARNEGRDYLNDGPEILRDAAKLCGPLKTALDLWKDITFNYTSTDTPDFVETATE 1552
M ++V+ERTR+K+ERYESGVIPYA+MGYWDA Y VKDTD+LALFR+TPQPGVDP+EAAAAVAGESSTATWTVVWTDLLTACDIYRAKAY+VDPVPG DQ+F YI+YECDLFEEGSLAN+TASIIGNVFGFKA+KALRLEDMRIP+AYLKTFQGPATG++VERERLDKFGRP LGATVKPKLGLSGKNYGRVV+EGLRGGLDFLKDDENINSQPFMRW+ERF Y MEGVNRS+AA+GEVKGSYLNVTA T+E MYERAEFAK +G+VI+MIDLVIGYTAIQ+MA+WAR+ DMILHLHRAGNSTYARQKNHGINFRVICKWMRMAGVDHIHAGTVVGKLEGDPLMVKGFYN LLLT+L+VNL QGIF+DM WASLRKV+PVASGGIHCGQMHQL++YLG+D VLQFGGGTIGHPDGI +GATANRVALESM+LARNEGRDYL +GP+ILR AA+ C PL+ ALDLWKDI FNY+STDT DFVET T+
Sbjct: 1 MFQSVEERTRIKNERYESGVIPYAEMGYWDAAYTVKDTDVLALFRITPQPGVDPIEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYKVDPVPGAADQYFGYIAYECDLFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIPYAYLKTFQGPATGVVVERERLDKFGRPLLGATVKPKLGLSGKNYGRVVFEGLRGGLDFLKDDENINSQPFMRWRERFAYVMEGVNRSAAASGEVKGSYLNVTAGTMENMYERAEFAKLIGSVIIMIDLVIGYTAIQSMAVWARQNDMILHLHRAGNSTYARQKNHGINFRVICKWMRMAGVDHIHAGTVVGKLEGDPLMVKGFYNVLLLTDLEVNLPQGIFFDMDWASLRKVLPVASGGIHCGQMHQLLHYLGEDCVLQFGGGTIGHPDGIASGATANRVALESMLLARNEGRDYLKEGPKILRTAAEQCTPLRVALDLWKDIAFNYSSTDTADFVETTTK 486
BLAST of mRNA_S-ischiensis_contig110.2420.1 vs. uniprot
Match: B1Q459_9STRA (Ribulose bisphosphate carboxylase large chain n=1 Tax=Aurearena cruciata TaxID=479719 RepID=B1Q459_9STRA) HSP 1 Score: 865 bits (2235), Expect = 3.610e-312 Identity = 419/463 (90.50%), Postives = 447/463 (96.54%), Query Frame = 2
Query: 170 MGYWDADYVVKDTDLLALFRLTPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGTTDQFFAYISYECDLFEEGSLANMTASIIGNVFGFKALKALRLEDMRIPFAYLKTFQGPATGLIVERERLDKFGRPFLGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRWQERFLYTMEGVNRSSAATGEVKGSYLNVTAATIEQMYERAEFAKGVGTVIVMIDLVIGYTAIQTMAIWARKADMILHLHRAGNSTYARQKNHGINFRVICKWMRMAGVDHIHAGTVVGKLEGDPLMVKGFYNTLLLTELKVNLSQGIFYDMSWASLRKVVPVASGGIHCGQMHQLVYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALESMILARNEGRDYLNDGPEILRDAAKLCGPLKTALDLWKDITFNYTSTDTPDFVETATESK 1558
MGYWDADY VKDTD+LALFR+TPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACD+YRAKAYRVDPVPGTTDQFF+YI+YECDLFEEGSLAN+TASIIGNVFGFKA+KALRLEDMRIP+AYLKTFQGPATGLIVERERLD FGRP LGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRWQERFLY MEGVNR++AA+GEVKGSYLN TAAT+E MYERAEFAK +G+VI+MIDLVIGYTAIQ+MAIW+R A+MILHLHRAGNSTYARQKNHGINFRVICKWMRMAGVDHIHAGTVVGKLEGDPLMVKGFYN LL T+L +NL QGIF+DM WASLRKVVPVASGGIHCGQMHQL+YYLGDDVVLQFGGGTIGHPDGIQAGATANRVALESM+LARNEGRDYLN+GP+ILRDAAK CGPLK+ALDLWKDITFNYTSTDT DFVET T+S+
Sbjct: 1 MGYWDADYNVKDTDVLALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDVYRAKAYRVDPVPGTTDQFFSYIAYECDLFEEGSLANLTASIIGNVFGFKAVKALRLEDMRIPYAYLKTFQGPATGLIVERERLDTFGRPLLGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRWQERFLYVMEGVNRAAAASGEVKGSYLNATAATMEDMYERAEFAKRIGSVIIMIDLVIGYTAIQSMAIWSRXANMILHLHRAGNSTYARQKNHGINFRVICKWMRMAGVDHIHAGTVVGKLEGDPLMVKGFYNVLLETQLSLNLPQGIFFDMDWASLRKVVPVASGGIHCGQMHQLIYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALESMVLARNEGRDYLNEGPDILRDAAKSCGPLKSALDLWKDITFNYTSTDTADFVETPTQSR 463
BLAST of mRNA_S-ischiensis_contig110.2420.1 vs. uniprot
Match: A0A0H5BNA2_9PHAE (Ribulose bisphosphate carboxylase large chain (Fragment) n=3 Tax=Choristocarpus tenellus TaxID=116065 RepID=A0A0H5BNA2_9PHAE) HSP 1 Score: 865 bits (2235), Expect = 4.710e-312 Identity = 417/470 (88.72%), Postives = 450/470 (95.74%), Query Frame = 2
Query: 149 GVIPYAKMGYWDADYVVKDTDLLALFRLTPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGTTDQFFAYISYECDLFEEGSLANMTASIIGNVFGFKALKALRLEDMRIPFAYLKTFQGPATGLIVERERLDKFGRPFLGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRWQERFLYTMEGVNRSSAATGEVKGSYLNVTAATIEQMYERAEFAKGVGTVIVMIDLVIGYTAIQTMAIWARKADMILHLHRAGNSTYARQKNHGINFRVICKWMRMAGVDHIHAGTVVGKLEGDPLMVKGFYNTLLLTELKVNLSQGIFYDMSWASLRKVVPVASGGIHCGQMHQLVYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALESMILARNEGRDYLNDGPEILRDAAKLCGPLKTALDLWKDITFNYTSTDTPDFVETATESK 1558
GVIPYAKMGYWDADY VKDTD+LALFR+TPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVP T +QFFAY++YECDLFEEGSLAN+TASIIGNVFGFKA+ ALRLEDMRIPFAYLKTFQGPATGLIVERERLDKFGRP LGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRW+ERFLY MEGVNR++A TGEVKGSYLNVTA T+E MYERA++AK +GTVI+MIDLVIGY+AIQ+MA++ARKA +ILHLHRAGNSTYARQKNHGINFRVICKWMRM GVDHIHAGTVVGKLEGDPLMVKGFYNTLLLT L+++L+QGIF+DM WASLRK VPVASGGIHCGQMHQL+YYLGDDVVLQFGGGTIGHPDGIQAGATANRVALESM+LARNEG DY+ GPEILR+AA++CGPLK ALDLWKDITF YTSTDTPDF+ETATE+K
Sbjct: 1 GVIPYAKMGYWDADYNVKDTDILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPNTANQFFAYVAYECDLFEEGSLANLTASIIGNVFGFKAISALRLEDMRIPFAYLKTFQGPATGLIVERERLDKFGRPLLGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRWKERFLYCMEGVNRAAAGTGEVKGSYLNVTAGTMENMYERADYAKQIGTVIIMIDLVIGYSAIQSMAVYARKAQLILHLHRAGNSTYARQKNHGINFRVICKWMRMCGVDHIHAGTVVGKLEGDPLMVKGFYNTLLLTSLEIDLAQGIFFDMDWASLRKCVPVASGGIHCGQMHQLLYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALESMVLARNEGVDYVEQGPEILRNAARVCGPLKAALDLWKDITFEYTSTDTPDFIETATEAK 470
BLAST of mRNA_S-ischiensis_contig110.2420.1 vs. uniprot
Match: RBL_PORPU (Ribulose bisphosphate carboxylase large chain n=8831 Tax=Eukaryota TaxID=2759 RepID=RBL_PORPU) HSP 1 Score: 863 bits (2230), Expect = 5.360e-311 Identity = 412/485 (84.95%), Postives = 460/485 (94.85%), Query Frame = 2
Query: 95 MPENVQERTRLKSERYESGVIPYAKMGYWDADYVVKDTDLLALFRLTPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGTTDQFFAYISYECDLFEEGSLANMTASIIGNVFGFKALKALRLEDMRIPFAYLKTFQGPATGLIVERERLDKFGRPFLGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRWQERFLYTMEGVNRSSAATGEVKGSYLNVTAATIEQMYERAEFAKGVGTVIVMIDLVIGYTAIQTMAIWARKADMILHLHRAGNSTYARQKNHGINFRVICKWMRMAGVDHIHAGTVVGKLEGDPLMVKGFYNTLLLTELKVNLSQGIFYDMSWASLRKVVPVASGGIHCGQMHQLVYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALESMILARNEGRDYLNDGPEILRDAAKLCGPLKTALDLWKDITFNYTSTDTPDFVETAT 1549
M ++V+ RTR+KSERYESGVIPYAKMGYWDADYV+K+TD+LALFR+TPQPGVDP+EA+AA+AGESSTATWTVVWTDLLTACD+YRAKAYRVDPVP DQ+FAYI+Y+ DLFEEGS+AN+TASIIGNVFGFKA+KALRLEDMR+P AYLKTFQGPATGLIVERER+DKFGRPFLGATVKPKLGLSGKNYGRVVYEGL+GGLDFLKDDENINSQPFMRW+ERFLY+MEGVN++SAA GE+KG YLNVTAAT+E MYERAEF+K VG++I MIDLVIGYTAIQ+MAIWARK DMILHLHRAGNSTY+RQKNHG+NFRVICKWMRMAGVDHIHAGTVVGKLEGDPLM+KGFYNTLL E ++NL QG+F+ +WASLRKVVPVASGGIH GQMHQL+ YLGDDVVLQFGGGTIGHPDGIQAGATANRVALESM++ARNEGRD++ +GP+ILRDAAK CGPL+TALDLWKDI+FNYTSTDT DFVET T
Sbjct: 1 MSQSVESRTRIKSERYESGVIPYAKMGYWDADYVIKETDILALFRITPQPGVDPIEASAAIAGESSTATWTVVWTDLLTACDLYRAKAYRVDPVPNVADQYFAYIAYDIDLFEEGSIANLTASIIGNVFGFKAVKALRLEDMRMPVAYLKTFQGPATGLIVERERMDKFGRPFLGATVKPKLGLSGKNYGRVVYEGLKGGLDFLKDDENINSQPFMRWRERFLYSMEGVNKASAAAGEIKGHYLNVTAATMEDMYERAEFSKVVGSIICMIDLVIGYTAIQSMAIWARKNDMILHLHRAGNSTYSRQKNHGMNFRVICKWMRMAGVDHIHAGTVVGKLEGDPLMIKGFYNTLLAGETEINLPQGLFFAQNWASLRKVVPVASGGIHAGQMHQLLDYLGDDVVLQFGGGTIGHPDGIQAGATANRVALESMVMARNEGRDFVAEGPQILRDAAKTCGPLQTALDLWKDISFNYTSTDTADFVETPT 485
BLAST of mRNA_S-ischiensis_contig110.2420.1 vs. uniprot
Match: A0A7U0QG21_OLILU (Ribulose bisphosphate carboxylase large chain n=2 Tax=Olisthodiscus luteus TaxID=83000 RepID=A0A7U0QG21_OLILU) HSP 1 Score: 863 bits (2229), Expect = 7.060e-311 Identity = 410/482 (85.06%), Postives = 458/482 (95.02%), Query Frame = 2
Query: 104 NVQERTRLKSERYESGVIPYAKMGYWDADYVVKDTDLLALFRLTPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAYRVDPVPGTTDQFFAYISYECDLFEEGSLANMTASIIGNVFGFKALKALRLEDMRIPFAYLKTFQGPATGLIVERERLDKFGRPFLGATVKPKLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRWQERFLYTMEGVNRSSAATGEVKGSYLNVTAATIEQMYERAEFAKGVGTVIVMIDLVIGYTAIQTMAIWARKADMILHLHRAGNSTYARQKNHGINFRVICKWMRMAGVDHIHAGTVVGKLEGDPLMVKGFYNTLLLTELKVNLSQGIFYDMSWASLRKVVPVASGGIHCGQMHQLVYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALESMILARNEGRDYLNDGPEILRDAAKLCGPLKTALDLWKDITFNYTSTDTPDFVETAT 1549
+V ERTR+K+ERYESGVIPYAKMGYWD +Y +K+TD+LALFR+TPQPGVDP+EAAAAVAGESSTATWTVVWTDLLTACD+YRAKAYRVDPVP +TDQ+FAYI+YECDLFEEGS+AN+TASIIGNVFGFKA++ALRLEDMRIP AYLKTFQGPATG++VERERLDKFGRP LGATVKPKLGLSGKNYGRVVYEGL+GGLDFLKDDENINSQPFMRW+ERFLY MEG+NR++A +GEVKGSYLN TAAT+E MYERAE+A+ VG+VI+MIDLVIGY+AIQ+MAIW+R DMILHLHRAGNSTYARQKNHGINFRVICKWMRMAGVDHIHAGTVVGKLEGDPLMV+GFY +LL TEL+VNL QG+F+DM WA+LRK +PVASGGIHCGQMHQL+YYLGDDVVLQFGGGTIGHPDGIQAGATANRVALE+M+LARNEGRDY+ +GP+ILR AA C PL+TALDLWKDI+FNYTSTDT DFVETAT
Sbjct: 2 SVSERTRIKNERYESGVIPYAKMGYWDGNYSIKETDVLALFRITPQPGVDPIEAAAAVAGESSTATWTVVWTDLLTACDVYRAKAYRVDPVPNSTDQYFAYIAYECDLFEEGSIANLTASIIGNVFGFKAVQALRLEDMRIPIAYLKTFQGPATGVVVERERLDKFGRPLLGATVKPKLGLSGKNYGRVVYEGLKGGLDFLKDDENINSQPFMRWRERFLYVMEGINRAAAGSGEVKGSYLNCTAATMEDMYERAEYARAVGSVIIMIDLVIGYSAIQSMAIWSRNNDMILHLHRAGNSTYARQKNHGINFRVICKWMRMAGVDHIHAGTVVGKLEGDPLMVQGFYASLLATELQVNLPQGLFFDMDWAALRKCMPVASGGIHCGQMHQLIYYLGDDVVLQFGGGTIGHPDGIQAGATANRVALEAMVLARNEGRDYVAEGPQILRTAASTCAPLQTALDLWKDISFNYTSTDTADFVETAT 483 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig110.2420.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig110.2420.1 >prot_S-ischiensis_contig110.2420.1 ID=prot_S-ischiensis_contig110.2420.1|Name=mRNA_S-ischiensis_contig110.2420.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=489bp MPENVQERTRLKSERYESGVIPYAKMGYWDADYVVKDTDLLALFRLTPQPback to top mRNA from alignment at S-ischiensis_contig110:133991..136102+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig110.2420.1 ID=mRNA_S-ischiensis_contig110.2420.1|Name=mRNA_S-ischiensis_contig110.2420.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=2112bp|location=Sequence derived from alignment at S-ischiensis_contig110:133991..136102+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig110:133991..136102+ >mRNA_S-ischiensis_contig110.2420.1 ID=mRNA_S-ischiensis_contig110.2420.1|Name=mRNA_S-ischiensis_contig110.2420.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2934bp|location=Sequence derived from alignment at S-ischiensis_contig110:133991..136102+ (Schizocladia ischiensis KU_0333)back to top |