prot_S-ischiensis_contig110.2410.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-ischiensis_contig110.2410.1
Unique Name	prot_S-ischiensis_contig110.2410.1
Type	polypeptide
Organism	Schizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length	510

Homology

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BLAST of mRNA_S-ischiensis_contig110.2410.1 vs. uniprot
Match: PSBB_TRICV (Photosystem II CP47 reaction center protein n=85 Tax=Sar TaxID=2698737 RepID=PSBB_TRICV)

HSP 1 Score: 1003 bits (2592), Expect = 0.000e+0
Identity = 469/509 (92.14%), Postives = 496/509 (97.45%), Query Frame = 0

Query:    1 MALPWYRVHTVVLNDPGRLIAVHLMHTALVAGWAGSMTLYELAIFDPSDPVLNPMWRQGMFVMPFISRLGVTDSWGGWSITGESISNPGLWSFEGVALTHIVLSGLCFLAAIWHWVYWDLELFRDPRTGEPALDLPKIFGIHLFLSGLLCFGFGAFHVTGLFGPGIWVSDAYGVTGKVQPVAPAWGPEGFNPFNPGGIAAHHIAAGTFGILAGVFHLTVRPPQRLYRALRMGNIETVLSSSISAVFFAAFVTSGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVELSLNENLSESEAWARIPDKLAFYDYIGNNPAKGGLFRAGPMDKGDGIAEAWLGHPIFRDREGRELSVRRMPAFFETFPVILVDNDGIIRADIPFRRAESKYSIEQVGVTVSFYGGKLNGQSFKDAPTVKKFARKAQLGEVFEFDRTSLESDGVFRSSPRGWYTFGHLNFALLFFLGHLWHGSRTIFRDVFTGIGSEVTEQVEFGAFQKLGDETTRKQGIV 509
            MALPWYRVHTVVLNDPGRLIAVHLMHTALVAGWAGSM LYELA+FDPSDPVLNPMWRQGMFVMPF++RLG+TDSWGGWSITGES+SNPG+WSFEGVAL+HI+LSG+CFLAAIWHWVYWDLELFRDPRTGEPALDLPKIFGIHLFLSGLLCFGFGAFHVTGLFGPGIWVSDAYGVTGKVQPVAPAWG +GFNPFNPGGIAAHHIAAG FGI AG+FHLTVRPPQRLYRALRMGNIETVLSSSI+AVFFAAFVTSGTMWYG+A TPIELFGPTRYQWDSGYFQQEIER+VE S++E LSES+AW+RIPDKLAFYDYIGNNPAKGGLFRAGPM+KGDGIAEAWLGHPIFRD++GREL+VRRMPAFFETFPVILVD DGIIRADIPFRRAESKYSIEQVGVTV FYGGKLNGQ+FKDAPTVKKFARKAQLGEVFEFDRTSLESDGVFRSSPRGWYTFGH NFALLFF GHLWHG RTIFRDVFTGIG+EVTEQVEFGAFQKLGD++T+KQG V
Sbjct:    1 MALPWYRVHTVVLNDPGRLIAVHLMHTALVAGWAGSMALYELAVFDPSDPVLNPMWRQGMFVMPFMTRLGITDSWGGWSITGESVSNPGIWSFEGVALSHIILSGMCFLAAIWHWVYWDLELFRDPRTGEPALDLPKIFGIHLFLSGLLCFGFGAFHVTGLFGPGIWVSDAYGVTGKVQPVAPAWGADGFNPFNPGGIAAHHIAAGIFGIFAGIFHLTVRPPQRLYRALRMGNIETVLSSSIAAVFFAAFVTSGTMWYGAAATPIELFGPTRYQWDSGYFQQEIERQVETSVSEGLSESQAWSRIPDKLAFYDYIGNNPAKGGLFRAGPMNKGDGIAEAWLGHPIFRDKDGRELTVRRMPAFFETFPVILVDKDGIIRADIPFRRAESKYSIEQVGVTVDFYGGKLNGQTFKDAPTVKKFARKAQLGEVFEFDRTSLESDGVFRSSPRGWYTFGHANFALLFFFGHLWHGGRTIFRDVFTGIGAEVTEQVEFGAFQKLGDKSTKKQGAV 509

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BLAST of mRNA_S-ischiensis_contig110.2410.1 vs. uniprot
Match: A0A7U0QGP2_OLILU (Photosystem II CP47 reaction center protein n=13 Tax=Ochrophyta TaxID=2696291 RepID=A0A7U0QGP2_OLILU)

HSP 1 Score: 992 bits (2565), Expect = 0.000e+0
Identity = 468/509 (91.94%), Postives = 494/509 (97.05%), Query Frame = 0

Query:    1 MALPWYRVHTVVLNDPGRLIAVHLMHTALVAGWAGSMTLYELAIFDPSDPVLNPMWRQGMFVMPFISRLGVTDSWGGWSITGESISNPGLWSFEGVALTHIVLSGLCFLAAIWHWVYWDLELFRDPRTGEPALDLPKIFGIHLFLSGLLCFGFGAFHVTGLFGPGIWVSDAYGVTGKVQPVAPAWGPEGFNPFNPGGIAAHHIAAGTFGILAGVFHLTVRPPQRLYRALRMGNIETVLSSSISAVFFAAFVTSGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVELSLNENLSESEAWARIPDKLAFYDYIGNNPAKGGLFRAGPMDKGDGIAEAWLGHPIFRDREGRELSVRRMPAFFETFPVILVDNDGIIRADIPFRRAESKYSIEQVGVTVSFYGGKLNGQSFKDAPTVKKFARKAQLGEVFEFDRTSLESDGVFRSSPRGWYTFGHLNFALLFFLGHLWHGSRTIFRDVFTGIGSEVTEQVEFGAFQKLGDETTRKQGIV 509
            M LPWYRVH+VVLNDPGRLIAVHLMHT+LV+GWAGSM LYELA+FDPSDPVLNPMWRQGMFVMPF++RLG+TDSWGGWSI+GES+SNPGLWSFEGVALTHIVLSGLCFLAAIWHWVYWDLELFR P T EPALDLPKIFGIHLFLSGLLCFGFGAFHVTGLFGPGIWVSD+YG+TGKVQ   P+WGPEGFNPFNPGG+AAHHIAAGTFGILAGVFH+TVRPPQRLYRALRMGNIETVLSSSISAVFFAAFVTSGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERR+E SL +N+S S+AW+ IPDKLAFYDYIGNNPAKGGLFRAGPM+KGDGIAEAWLGHPIFRD+EGREL+VRRMPAFFETFPVILVD DGIIRADIPFRRAESKYSIEQVGVTVSFYGGKLNGQSFKDAPTVKKFARKAQLGEVFEFDRTSLESDGVFRSSPRGWYTFGH NFALLFF GHLWHGSRTIFRDVFTGIG+EVTEQVEFGAFQKLGDE+TRK+G+V
Sbjct:    1 MGLPWYRVHSVVLNDPGRLIAVHLMHTSLVSGWAGSMALYELAVFDPSDPVLNPMWRQGMFVMPFMTRLGITDSWGGWSISGESVSNPGLWSFEGVALTHIVLSGLCFLAAIWHWVYWDLELFRAP-TREPALDLPKIFGIHLFLSGLLCFGFGAFHVTGLFGPGIWVSDSYGLTGKVQAAIPSWGPEGFNPFNPGGVAAHHIAAGTFGILAGVFHITVRPPQRLYRALRMGNIETVLSSSISAVFFAAFVTSGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRIETSLEQNVSLSDAWSEIPDKLAFYDYIGNNPAKGGLFRAGPMNKGDGIAEAWLGHPIFRDKEGRELTVRRMPAFFETFPVILVDKDGIIRADIPFRRAESKYSIEQVGVTVSFYGGKLNGQSFKDAPTVKKFARKAQLGEVFEFDRTSLESDGVFRSSPRGWYTFGHANFALLFFFGHLWHGSRTIFRDVFTGIGAEVTEQVEFGAFQKLGDESTRKKGLV 508

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BLAST of mRNA_S-ischiensis_contig110.2410.1 vs. uniprot
Match: A0A7S2V2W1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2W1_9STRA)

HSP 1 Score: 990 bits (2560), Expect = 0.000e+0
Identity = 462/509 (90.77%), Postives = 491/509 (96.46%), Query Frame = 0

Query:    1 MALPWYRVHTVVLNDPGRLIAVHLMHTALVAGWAGSMTLYELAIFDPSDPVLNPMWRQGMFVMPFISRLGVTDSWGGWSITGESISNPGLWSFEGVALTHIVLSGLCFLAAIWHWVYWDLELFRDPRTGEPALDLPKIFGIHLFLSGLLCFGFGAFHVTGLFGPGIWVSDAYGVTGKVQPVAPAWGPEGFNPFNPGGIAAHHIAAGTFGILAGVFHLTVRPPQRLYRALRMGNIETVLSSSISAVFFAAFVTSGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVELSLNENLSESEAWARIPDKLAFYDYIGNNPAKGGLFRAGPMDKGDGIAEAWLGHPIFRDREGRELSVRRMPAFFETFPVILVDNDGIIRADIPFRRAESKYSIEQVGVTVSFYGGKLNGQSFKDAPTVKKFARKAQLGEVFEFDRTSLESDGVFRSSPRGWYTFGHLNFALLFFLGHLWHGSRTIFRDVFTGIGSEVTEQVEFGAFQKLGDETTRKQGIV 509
            MALPWYRVHTVVLNDPGRLIAVHLMHTALVAGWAGSM LYELAIFDPSDPVLNPMWRQGMFVMPF++R+G+TDSWGGWSITG+S SNPGLWS+EGVALTHIVLSG  FLAAIWHWVYWDLELFRDP++G+P LDLPKIFGIHLFLSGLLCFGFGAFHVTGLFGPGIWVSDAYG+TGKVQP AP+WGPEGFNPFNPGG+AAHH+AAGT G+LAG FHL VRPPQRLYRAL MGNIETVLSSSI+AVFFAAFVTSGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVE SL  NLSE+EAW+RIPDKLAFYDYIGNNPAKGGLFR+GPM+KGDGIAEAWLGHPIFRDREGREL+VRRMPAFFETFPVILVD+DG++RADIPFRRAESKYSIEQVGV VSFYGGKLNGQSFKDAPTVKK+ARKAQLGEVFEFD+TSLESDGVFRSSPRGWYTFGH NFALLFF GHLWHGSRT+FRDVFTGIG+EVTEQVEFG FQKLGD+TTR+QG V
Sbjct:    1 MALPWYRVHTVVLNDPGRLIAVHLMHTALVAGWAGSMALYELAIFDPSDPVLNPMWRQGMFVMPFMTRIGITDSWGGWSITGDSTSNPGLWSYEGVALTHIVLSGTLFLAAIWHWVYWDLELFRDPKSGDPGLDLPKIFGIHLFLSGLLCFGFGAFHVTGLFGPGIWVSDAYGLTGKVQPAAPSWGPEGFNPFNPGGVAAHHMAAGTVGVLAGTFHLVVRPPQRLYRALSMGNIETVLSSSIAAVFFAAFVTSGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVEASLTGNLSENEAWSRIPDKLAFYDYIGNNPAKGGLFRSGPMNKGDGIAEAWLGHPIFRDREGRELTVRRMPAFFETFPVILVDSDGVVRADIPFRRAESKYSIEQVGVNVSFYGGKLNGQSFKDAPTVKKYARKAQLGEVFEFDKTSLESDGVFRSSPRGWYTFGHANFALLFFFGHLWHGSRTLFRDVFTGIGAEVTEQVEFGVFQKLGDDTTRRQGAV 509

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BLAST of mRNA_S-ischiensis_contig110.2410.1 vs. uniprot
Match: A0A2U9NM32_9STRA (Photosystem II CP47 reaction center protein n=2 Tax=Bacillariophyta TaxID=2836 RepID=A0A2U9NM32_9STRA)

HSP 1 Score: 989 bits (2556), Expect = 0.000e+0
Identity = 459/509 (90.18%), Postives = 491/509 (96.46%), Query Frame = 0

Query:    1 MALPWYRVHTVVLNDPGRLIAVHLMHTALVAGWAGSMTLYELAIFDPSDPVLNPMWRQGMFVMPFISRLGVTDSWGGWSITGESISNPGLWSFEGVALTHIVLSGLCFLAAIWHWVYWDLELFRDPRTGEPALDLPKIFGIHLFLSGLLCFGFGAFHVTGLFGPGIWVSDAYGVTGKVQPVAPAWGPEGFNPFNPGGIAAHHIAAGTFGILAGVFHLTVRPPQRLYRALRMGNIETVLSSSISAVFFAAFVTSGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVELSLNENLSESEAWARIPDKLAFYDYIGNNPAKGGLFRAGPMDKGDGIAEAWLGHPIFRDREGRELSVRRMPAFFETFPVILVDNDGIIRADIPFRRAESKYSIEQVGVTVSFYGGKLNGQSFKDAPTVKKFARKAQLGEVFEFDRTSLESDGVFRSSPRGWYTFGHLNFALLFFLGHLWHGSRTIFRDVFTGIGSEVTEQVEFGAFQKLGDETTRKQGIV 509
            MALPWYRVHTVVLNDPGRLIAVH+MHTALVAGWAGSM LYELA+FDPSDPVLNPMWRQGMFVMPF++RLG+TDSWGGWSITGES+SNPGLWSFEGVAL+HIVLSG+CFLAAIWHWVYWDLELF+DPRTG+ ALDLP +FGIHLFLSGLLCFGFGAFHVTGLFGPGIW+SDAYG+TGKVQPVAP+WG +GFNPFN GGIAAHHIAAG FGI AGVFHLTVRPPQRLYR LRMGNIET+LSSSI+AVFFAAF+TSGTMWYG+A TPIELFGPTRYQWDSGYFQQEIER+VE S+ E L+ES+AW+RIPDKLAFYDYIGNNPAKGGLFRAGPM+KGDGIAEAWLGHPIFRD+EGREL+VRRMPAFFETFPVILVD DGIIRADIPFRRAESKYSIEQVGVTV FYGGKLNGQ+FKDAPTVKKFARKAQLGEVFEFDRTSLESDGVFRSSPRGWYTFGH NFALLFFLGHLWHG RTIFRDVFTGIG+EVTEQVEFGAFQKLGD +T+KQG +
Sbjct:    1 MALPWYRVHTVVLNDPGRLIAVHIMHTALVAGWAGSMALYELAVFDPSDPVLNPMWRQGMFVMPFMTRLGITDSWGGWSITGESVSNPGLWSFEGVALSHIVLSGMCFLAAIWHWVYWDLELFKDPRTGQTALDLPNVFGIHLFLSGLLCFGFGAFHVTGLFGPGIWISDAYGITGKVQPVAPSWGADGFNPFNSGGIAAHHIAAGIFGIFAGVFHLTVRPPQRLYRGLRMGNIETILSSSIAAVFFAAFITSGTMWYGAAATPIELFGPTRYQWDSGYFQQEIERQVEASVTEGLTESQAWSRIPDKLAFYDYIGNNPAKGGLFRAGPMNKGDGIAEAWLGHPIFRDKEGRELTVRRMPAFFETFPVILVDKDGIIRADIPFRRAESKYSIEQVGVTVDFYGGKLNGQTFKDAPTVKKFARKAQLGEVFEFDRTSLESDGVFRSSPRGWYTFGHANFALLFFLGHLWHGGRTIFRDVFTGIGAEVTEQVEFGAFQKLGDSSTKKQGAI 509

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BLAST of mRNA_S-ischiensis_contig110.2410.1 vs. uniprot
Match: A0A3G2QYB8_9STRA (Photosystem II CP47 reaction center protein n=14 Tax=Ochrophyta TaxID=2696291 RepID=A0A3G2QYB8_9STRA)

HSP 1 Score: 984 bits (2545), Expect = 0.000e+0
Identity = 460/509 (90.37%), Postives = 495/509 (97.25%), Query Frame = 0

Query:    1 MALPWYRVHTVVLNDPGRLIAVHLMHTALVAGWAGSMTLYELAIFDPSDPVLNPMWRQGMFVMPFISRLGVTDSWGGWSITGESISNPGLWSFEGVALTHIVLSGLCFLAAIWHWVYWDLELFRDPRTGEPALDLPKIFGIHLFLSGLLCFGFGAFHVTGLFGPGIWVSDAYGVTGKVQPVAPAWGPEGFNPFNPGGIAAHHIAAGTFGILAGVFHLTVRPPQRLYRALRMGNIETVLSSSISAVFFAAFVTSGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVELSLNENLSESEAWARIPDKLAFYDYIGNNPAKGGLFRAGPMDKGDGIAEAWLGHPIFRDREGRELSVRRMPAFFETFPVILVDNDGIIRADIPFRRAESKYSIEQVGVTVSFYGGKLNGQSFKDAPTVKKFARKAQLGEVFEFDRTSLESDGVFRSSPRGWYTFGHLNFALLFFLGHLWHGSRTIFRDVFTGIGSEVTEQVEFGAFQKLGDETTRKQGIV 509
            MALPWYRVHTVVLNDPGRLIAVHLMHTALV+GWAGSM LYELAIFDPSDPVLNPMWRQGMFVMPF++RLG+T+SWGGW+ITGES + PG+WSFEGVALTHIVLSGL FLAAIWHWVYWDL+LF+DPRTGEPALDLPKIFGIHL LSG LCFGFGAFHVTGLFGPGIWVSDA+G+TG+VQPVAP+WGPEGFNPFNPGGIA+HHIAAGT GI+AG+FHLTVRPPQRLYRALRMGNIETVLSSSISAVF+AAFVTSGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVE S+++NLSE++AW++IPDKLAFYDYIGNNPAKGGLFR+GPM+KGDGIAEAWLGHPIFRDREGREL+VRRMPAFFETFPVILVD DGIIRADIPFRRAESKYSIEQVGVTVSFYGGKLNGQ+FKDAPTVKKFARKAQLGEVFEFDRTSLESDGVFRSSPRGWYTFGH NFALLFF GHLWHG+RTIFRDVFTGIG EVTEQVEFGAF+K+GD+TT ++G V
Sbjct:    1 MALPWYRVHTVVLNDPGRLIAVHLMHTALVSGWAGSMALYELAIFDPSDPVLNPMWRQGMFVMPFMARLGITESWGGWTITGESSTTPGIWSFEGVALTHIVLSGLLFLAAIWHWVYWDLDLFQDPRTGEPALDLPKIFGIHLLLSGFLCFGFGAFHVTGLFGPGIWVSDAFGLTGRVQPVAPSWGPEGFNPFNPGGIASHHIAAGTLGIIAGIFHLTVRPPQRLYRALRMGNIETVLSSSISAVFWAAFVTSGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVETSVSQNLSETDAWSQIPDKLAFYDYIGNNPAKGGLFRSGPMNKGDGIAEAWLGHPIFRDREGRELTVRRMPAFFETFPVILVDKDGIIRADIPFRRAESKYSIEQVGVTVSFYGGKLNGQTFKDAPTVKKFARKAQLGEVFEFDRTSLESDGVFRSSPRGWYTFGHANFALLFFFGHLWHGARTIFRDVFTGIGPEVTEQVEFGAFRKIGDKTTPRKGTV 509

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BLAST of mRNA_S-ischiensis_contig110.2410.1 vs. uniprot
Match: Q4G3C5_EMIHU (Photosystem II CP47 reaction center protein n=20 Tax=Eukaryota TaxID=2759 RepID=Q4G3C5_EMIHU)

HSP 1 Score: 984 bits (2543), Expect = 0.000e+0
Identity = 459/509 (90.18%), Postives = 491/509 (96.46%), Query Frame = 0

Query:    1 MALPWYRVHTVVLNDPGRLIAVHLMHTALVAGWAGSMTLYELAIFDPSDPVLNPMWRQGMFVMPFISRLGVTDSWGGWSITGESISNPGLWSFEGVALTHIVLSGLCFLAAIWHWVYWDLELFRDPRTGEPALDLPKIFGIHLFLSGLLCFGFGAFHVTGLFGPGIWVSDAYGVTGKVQPVAPAWGPEGFNPFNPGGIAAHHIAAGTFGILAGVFHLTVRPPQRLYRALRMGNIETVLSSSISAVFFAAFVTSGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVELSLNENLSESEAWARIPDKLAFYDYIGNNPAKGGLFRAGPMDKGDGIAEAWLGHPIFRDREGRELSVRRMPAFFETFPVILVDNDGIIRADIPFRRAESKYSIEQVGVTVSFYGGKLNGQSFKDAPTVKKFARKAQLGEVFEFDRTSLESDGVFRSSPRGWYTFGHLNFALLFFLGHLWHGSRTIFRDVFTGIGSEVTEQVEFGAFQKLGDETTRKQGIV 509
            MALPWYRVHTVVLNDPGRLIAVHLMHTALVAGWAGSM LYELA+FDPSDPVLNPMWRQGMFVMPF++RLGVTDSWGGWSITGES+SNPG+WSFEGVALTHIVLSG+CFLAAIWHWVYWDLELFRDPRTGEPALDLPKIFGIHLFLS LLCFGFGAFHVTG FGPGIWVSDAYG+TG+VQ VAPAWG EGFNPFNPGGIA+HHIAAG  G+LAGVFHLT+RPPQRLYRALRMGNIETVLSSSISAVFFAAF+TSGTMWYG+ATTPIELFGPTRYQWDSGYFQQEIERRVE SL+E LS S+AW+RIPDKLAFYDYIGNNPAKGGLFRAGPM+KGDGIAEAWLGHP+F+D+EGREL+VRRMPAFFETFPVILVD DGI+RADIPFRRAESKYSIEQVGV+ +FYGGKLNGQ F DAPTVKK+ARK+QLGEVFEFDRT+LESDGVFRSSPRGWYTFGH NFALLFFLGHLWHG RT+FRDVF GIG+EV EQVEFGAFQKLGD++T+KQGIV
Sbjct:    1 MALPWYRVHTVVLNDPGRLIAVHLMHTALVAGWAGSMALYELAVFDPSDPVLNPMWRQGMFVMPFMARLGVTDSWGGWSITGESVSNPGIWSFEGVALTHIVLSGMCFLAAIWHWVYWDLELFRDPRTGEPALDLPKIFGIHLFLSSLLCFGFGAFHVTGTFGPGIWVSDAYGITGRVQAVAPAWGAEGFNPFNPGGIASHHIAAGILGLLAGVFHLTIRPPQRLYRALRMGNIETVLSSSISAVFFAAFITSGTMWYGAATTPIELFGPTRYQWDSGYFQQEIERRVESSLSEGLSLSQAWSRIPDKLAFYDYIGNNPAKGGLFRAGPMNKGDGIAEAWLGHPVFQDKEGRELTVRRMPAFFETFPVILVDKDGIVRADIPFRRAESKYSIEQVGVSCNFYGGKLNGQVFTDAPTVKKYARKSQLGEVFEFDRTTLESDGVFRSSPRGWYTFGHANFALLFFLGHLWHGGRTLFRDVFAGIGAEVLEQVEFGAFQKLGDKSTKKQGIV 509

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BLAST of mRNA_S-ischiensis_contig110.2410.1 vs. uniprot
Match: A0A6G6D7A3_ECTSI (Photosystem II CP47 reaction center protein n=55 Tax=Phaeophyceae TaxID=2870 RepID=A0A6G6D7A3_ECTSI)

HSP 1 Score: 978 bits (2529), Expect = 0.000e+0
Identity = 463/511 (90.61%), Postives = 489/511 (95.69%), Query Frame = 0

Query:    1 MALPWYRVHTVVLNDPGRLIAVHLMHTALVAGWAGSMTLYELAIFDPSDPVLNPMWRQGMFVMPFISRLGVTDSWGGWSITGESISNP--GLWSFEGVALTHIVLSGLCFLAAIWHWVYWDLELFRDPRTGEPALDLPKIFGIHLFLSGLLCFGFGAFHVTGLFGPGIWVSDAYGVTGKVQPVAPAWGPEGFNPFNPGGIAAHHIAAGTFGILAGVFHLTVRPPQRLYRALRMGNIETVLSSSISAVFFAAFVTSGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVELSLNENLSESEAWARIPDKLAFYDYIGNNPAKGGLFRAGPMDKGDGIAEAWLGHPIFRDREGRELSVRRMPAFFETFPVILVDNDGIIRADIPFRRAESKYSIEQVGVTVSFYGGKLNGQSFKDAPTVKKFARKAQLGEVFEFDRTSLESDGVFRSSPRGWYTFGHLNFALLFFLGHLWHGSRTIFRDVFTGIGSEVTEQVEFGAFQKLGDETTRKQGIV 509
            MALPWYRVHTVVLNDPGRLIAVHLMHT LVAGWAGSM LYEL+IFD SDP+LNPMWRQGMFVMPF++RLGV+DSW GW I GE  S P   LW +EGVA THI+LSGLCFLAA+WHWVYWDLELFRDPRTGEP+LDLPKIFGIHLFLSGLLCFGFGAFHVTG FGPGIWVSDAYG+TG+VQPVAP+WGP GFNPFNPGGIA+HH+AAG+FG+LAG FHLT+RPPQRLYRALRMGNIETVLSSSI+AVFFAAF+TSGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVE+SLNE LSESEAW+ +PDKLAFYDYIGNNPAKGGLFR+GPM+KGDGIAEAWLGHPIFRDREGRELSVRRMPAFFETFPVIL+D DGIIRADIPFRRAESKYSIEQVGV VSFYGGKLNGQSFKDAPTVKKFARKAQLGEVFEFDRTSLESDGVFRSSPRGWYTFGHLN ALLFFLGHLWHGSRTIFRDVFTGIGSEVTEQVEFGAFQKLGDETTRKQG+V
Sbjct:    1 MALPWYRVHTVVLNDPGRLIAVHLMHTGLVAGWAGSMALYELSIFDFSDPILNPMWRQGMFVMPFMTRLGVSDSWTGWDIAGER-SEPIASLWCYEGVAYTHIILSGLCFLAAVWHWVYWDLELFRDPRTGEPSLDLPKIFGIHLFLSGLLCFGFGAFHVTGFFGPGIWVSDAYGLTGQVQPVAPSWGPSGFNPFNPGGIASHHMAAGSFGVLAGGFHLTLRPPQRLYRALRMGNIETVLSSSIAAVFFAAFITSGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVEVSLNEGLSESEAWSSLPDKLAFYDYIGNNPAKGGLFRSGPMNKGDGIAEAWLGHPIFRDREGRELSVRRMPAFFETFPVILIDKDGIIRADIPFRRAESKYSIEQVGVNVSFYGGKLNGQSFKDAPTVKKFARKAQLGEVFEFDRTSLESDGVFRSSPRGWYTFGHLNLALLFFLGHLWHGSRTIFRDVFTGIGSEVTEQVEFGAFQKLGDETTRKQGLV 510

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BLAST of mRNA_S-ischiensis_contig110.2410.1 vs. uniprot
Match: PSBB_PORPU (Photosystem II CP47 reaction center protein n=231 Tax=Eukaryota TaxID=2759 RepID=PSBB_PORPU)

HSP 1 Score: 974 bits (2517), Expect = 0.000e+0
Identity = 455/509 (89.39%), Postives = 485/509 (95.28%), Query Frame = 0

Query:    1 MALPWYRVHTVVLNDPGRLIAVHLMHTALVAGWAGSMTLYELAIFDPSDPVLNPMWRQGMFVMPFISRLGVTDSWGGWSITGESISNPGLWSFEGVALTHIVLSGLCFLAAIWHWVYWDLELFRDPRTGEPALDLPKIFGIHLFLSGLLCFGFGAFHVTGLFGPGIWVSDAYGVTGKVQPVAPAWGPEGFNPFNPGGIAAHHIAAGTFGILAGVFHLTVRPPQRLYRALRMGNIETVLSSSISAVFFAAFVTSGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVELSLNENLSESEAWARIPDKLAFYDYIGNNPAKGGLFRAGPMDKGDGIAEAWLGHPIFRDREGRELSVRRMPAFFETFPVILVDNDGIIRADIPFRRAESKYSIEQVGVTVSFYGGKLNGQSFKDAPTVKKFARKAQLGEVFEFDRTSLESDGVFRSSPRGWYTFGHLNFALLFFLGHLWHGSRTIFRDVFTGIGSEVTEQVEFGAFQKLGDETTRKQGIV 509
            M LPWYRVHTVVLNDPGRLIAVHLMHTALVAGWAGSM LYELA+FDPSDPVLNPMWRQGMFVMPF++RLGVTDSWGGWSITGES+SNPGLWS EGVALTHIVLSG+ FLAAIWHWVYWDLELFRDPRTGEPALDLPKIFGIHL LS LLCFGFGAFHVTGLFGPG+WVSD YGVTGKV PVAPAWGPEGFNPFNPGG+A+HHIAAGT GILAGVFHLTVRPPQRLYRALRMGNIETVLSSSISAVFF+AF+T GTMWYGSATTPIELFGPTRYQWDSGYFQQEIE+RVE ++ +  + SEAW+RIPDKLAFYDYIGNNPAKGGLFRAGPM+KGDG+AEAWLGHP+F+D+EGRELSVRRMPAFFETFPVILVD DGIIRADIPFRRAESKYSIEQVGVT SFYGGKLNGQ F DAP+VKK+ARKAQLGEVFEFDRT+LESDGVFRSSPRGW+TFGH NFAL+FF GHLWHGSRTIFRDVF GIG+EVTEQVEFGAFQKLGD +++KQG V
Sbjct:    1 MGLPWYRVHTVVLNDPGRLIAVHLMHTALVAGWAGSMALYELAVFDPSDPVLNPMWRQGMFVMPFMARLGVTDSWGGWSITGESVSNPGLWSLEGVALTHIVLSGMLFLAAIWHWVYWDLELFRDPRTGEPALDLPKIFGIHLLLSSLLCFGFGAFHVTGLFGPGMWVSDGYGVTGKVLPVAPAWGPEGFNPFNPGGVASHHIAAGTVGILAGVFHLTVRPPQRLYRALRMGNIETVLSSSISAVFFSAFITCGTMWYGSATTPIELFGPTRYQWDSGYFQQEIEKRVENAIADGAAPSEAWSRIPDKLAFYDYIGNNPAKGGLFRAGPMNKGDGVAEAWLGHPVFQDKEGRELSVRRMPAFFETFPVILVDKDGIIRADIPFRRAESKYSIEQVGVTASFYGGKLNGQVFNDAPSVKKYARKAQLGEVFEFDRTTLESDGVFRSSPRGWFTFGHANFALIFFFGHLWHGSRTIFRDVFAGIGAEVTEQVEFGAFQKLGDRSSKKQGAV 509

[Close]

BLAST of mRNA_S-ischiensis_contig110.2410.1 vs. uniprot
Match: PSBB_GUITH (Photosystem II CP47 reaction center protein n=12 Tax=Cryptophyceae TaxID=3027 RepID=PSBB_GUITH)

HSP 1 Score: 971 bits (2511), Expect = 0.000e+0
Identity = 450/509 (88.41%), Postives = 485/509 (95.28%), Query Frame = 0

Query:    1 MALPWYRVHTVVLNDPGRLIAVHLMHTALVAGWAGSMTLYELAIFDPSDPVLNPMWRQGMFVMPFISRLGVTDSWGGWSITGESISNPGLWSFEGVALTHIVLSGLCFLAAIWHWVYWDLELFRDPRTGEPALDLPKIFGIHLFLSGLLCFGFGAFHVTGLFGPGIWVSDAYGVTGKVQPVAPAWGPEGFNPFNPGGIAAHHIAAGTFGILAGVFHLTVRPPQRLYRALRMGNIETVLSSSISAVFFAAFVTSGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVELSLNENLSESEAWARIPDKLAFYDYIGNNPAKGGLFRAGPMDKGDGIAEAWLGHPIFRDREGRELSVRRMPAFFETFPVILVDNDGIIRADIPFRRAESKYSIEQVGVTVSFYGGKLNGQSFKDAPTVKKFARKAQLGEVFEFDRTSLESDGVFRSSPRGWYTFGHLNFALLFFLGHLWHGSRTIFRDVFTGIGSEVTEQVEFGAFQKLGDETTRKQGIV 509
            M LPWYRVHTVVLNDPGRLIAVHLMHTALVAGWAGSM LYELA+FDPSDPVLNPMWRQGM+VMPF++R+GVTDSWGGWSITGES+SNPG WSFEGVAL HI LSGL FLAA+WHWVYWDLELFRDPRTG PALDLPKIFGIHL L+GLLCFGFGAFHVTG +GPGIWVSDAYG+TGKVQPVAP WGPEGFNPFNP G+A+HHIAAG  G +AG+FH+ VRPPQRLYRALRMGNIETVLSSSI+AVFFAAF+T+GTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVE SLNE LS SEAW+RIPDKLAFYDY+GNNPAKGGLFRAGPM+KGDGIAEAWLGHP+F+D+EGREL+VRRMPAFFETFPVILVD DGIIRADIPFRRAESKYS+EQVGVTVSFYGGKLNGQ++ DAPTVKK+ARKAQLGEV EFDRT+LESDGVFRSSPRGWYTFGH NFALLFFLGHLWHGSRT+FRDVF+GIG+EVTEQVEFGAFQKLGD +T+KQG V
Sbjct:    1 MGLPWYRVHTVVLNDPGRLIAVHLMHTALVAGWAGSMALYELAVFDPSDPVLNPMWRQGMYVMPFMARIGVTDSWGGWSITGESVSNPGFWSFEGVALAHIGLSGLLFLAAVWHWVYWDLELFRDPRTGNPALDLPKIFGIHLVLAGLLCFGFGAFHVTGAWGPGIWVSDAYGITGKVQPVAPTWGPEGFNPFNPSGVASHHIAAGILGFIAGIFHIAVRPPQRLYRALRMGNIETVLSSSIAAVFFAAFITTGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVENSLNEGLSLSEAWSRIPDKLAFYDYVGNNPAKGGLFRAGPMNKGDGIAEAWLGHPVFQDKEGRELTVRRMPAFFETFPVILVDKDGIIRADIPFRRAESKYSVEQVGVTVSFYGGKLNGQTYTDAPTVKKYARKAQLGEVLEFDRTTLESDGVFRSSPRGWYTFGHANFALLFFLGHLWHGSRTLFRDVFSGIGAEVTEQVEFGAFQKLGDRSTKKQGAV 509

[Close]

BLAST of mRNA_S-ischiensis_contig110.2410.1 vs. uniprot
Match: A0A1C9CDW4_PORSO (Photosystem II CP47 reaction center protein n=1 Tax=Porphyridium sordidum TaxID=28024 RepID=A0A1C9CDW4_PORSO)

HSP 1 Score: 970 bits (2507), Expect = 0.000e+0
Identity = 452/501 (90.22%), Postives = 483/501 (96.41%), Query Frame = 0

Query:    9 HTVVLNDPGRLIAVHLMHTALVAGWAGSMTLYELAIFDPSDPVLNPMWRQGMFVMPFISRLGVTDSWGGWSITGESISNPGLWSFEGVALTHIVLSGLCFLAAIWHWVYWDLELFRDPRTGEPALDLPKIFGIHLFLSGLLCFGFGAFHVTGLFGPGIWVSDAYGVTGKVQPVAPAWGPEGFNPFNPGGIAAHHIAAGTFGILAGVFHLTVRPPQRLYRALRMGNIETVLSSSISAVFFAAFVTSGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVELSLNENLSESEAWARIPDKLAFYDYIGNNPAKGGLFRAGPMDKGDGIAEAWLGHPIFRDREGRELSVRRMPAFFETFPVILVDNDGIIRADIPFRRAESKYSIEQVGVTVSFYGGKLNGQSFKDAPTVKKFARKAQLGEVFEFDRTSLESDGVFRSSPRGWYTFGHLNFALLFFLGHLWHGSRTIFRDVFTGIGSEVTEQVEFGAFQKLGDETTRKQGIV 509
            HTVVLNDPGRLIAVHLMHTALVAGWAGSM LYELA+FDPSDPVLNPMWRQGMFVMPF++RLGVTDSWGGWSITGES+SNPG+WSFEGVALTHIVLSGL FLAAIWHW+YWDLELFRDPRTGEPALDLPKIFGIHL L+ +LCFGFGAFHVTGLFGPGIWVSDAYG+TGKVQPVAPAWGPEGFNPFNPGG+A+HHIAAGT GILAGVFHL++RPPQRLYRALRMGNIETVLSSSI+AVFFAAF+TSGTMWYGSATTPIELFGPTRYQWDSGYFQQEIER+VE SL+E LS ++AW+RIPDKLAFYDYIGNNPAKGGLFR+GPMDKGDGIAEAWLGHP+F+D+EGREL+VRRMPAFFETFPVILVD DGIIRADIPFRRAESKYSIEQVGVT+ FYGGKLNGQSF DAPTVKK+ARKAQLGEVFEFDR +LESDGVFRSSPRGWYTFGH NFALLFF GHLWHGSRT+FRDVF GIG+EVTEQ EFGAF KLGD TT+KQGIV
Sbjct:    8 HTVVLNDPGRLIAVHLMHTALVAGWAGSMALYELAVFDPSDPVLNPMWRQGMFVMPFMTRLGVTDSWGGWSITGESVSNPGIWSFEGVALTHIVLSGLLFLAAIWHWIYWDLELFRDPRTGEPALDLPKIFGIHLLLASILCFGFGAFHVTGLFGPGIWVSDAYGITGKVQPVAPAWGPEGFNPFNPGGVASHHIAAGTVGILAGVFHLSIRPPQRLYRALRMGNIETVLSSSIAAVFFAAFITSGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERQVENSLSEGLSLNDAWSRIPDKLAFYDYIGNNPAKGGLFRSGPMDKGDGIAEAWLGHPVFKDKEGRELTVRRMPAFFETFPVILVDQDGIIRADIPFRRAESKYSIEQVGVTIDFYGGKLNGQSFTDAPTVKKYARKAQLGEVFEFDRITLESDGVFRSSPRGWYTFGHANFALLFFFGHLWHGSRTLFRDVFAGIGAEVTEQAEFGAFTKLGDRTTKKQGIV 508

The following BLAST results are available for this feature:

BLAST of mRNA_S-ischiensis_contig110.2410.1 vs. uniprot

BLAST of mRNA_S-ischiensis_contig110.2410.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
PSBB_TRICV	0.000e+0	92.14	Photosystem II CP47 reaction center protein n=85 T...	[more]
A0A7U0QGP2_OLILU	0.000e+0	91.94	Photosystem II CP47 reaction center protein n=13 T...	[more]
A0A7S2V2W1_9STRA	0.000e+0	90.77	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A2U9NM32_9STRA	0.000e+0	90.18	Photosystem II CP47 reaction center protein n=2 Ta...	[more]
A0A3G2QYB8_9STRA	0.000e+0	90.37	Photosystem II CP47 reaction center protein n=14 T...	[more]
Q4G3C5_EMIHU	0.000e+0	90.18	Photosystem II CP47 reaction center protein n=20 T...	[more]
A0A6G6D7A3_ECTSI	0.000e+0	90.61	Photosystem II CP47 reaction center protein n=55 T...	[more]
PSBB_PORPU	0.000e+0	89.39	Photosystem II CP47 reaction center protein n=231 ...	[more]
PSBB_GUITH	0.000e+0	88.41	Photosystem II CP47 reaction center protein n=12 T...	[more]
A0A1C9CDW4_PORSO	0.000e+0	90.22	Photosystem II CP47 reaction center protein n=1 Ta...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017486	Photosystem II CP47 reaction centre protein	TIGRFAM	TIGR03039	TIGR03039	coord: 1..504 e-value: 1.4E-298 score: 988.5
IPR017486	Photosystem II CP47 reaction centre protein	HAMAP	MF_01495	PSII_PsbB_CP47	coord: 1..509 score: 62.142
None	No IPR available	GENE3D	3.10.680.10		coord: 272..444 e-value: 2.3E-94 score: 315.7
None	No IPR available	PANTHER	PTHR33180:SF13		coord: 1..506
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 198..217
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 259..448
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 218..236
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 61..78
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 79..97
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 449..468
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 237..258
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 119..138
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..19
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 41..60
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 163..197
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 469..509
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 98..118
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 139..162
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 20..40
None	No IPR available	TMHMM	TMhelix		coord: 237..259
None	No IPR available	TMHMM	TMhelix		coord: 198..217
None	No IPR available	TMHMM	TMhelix		coord: 20..42
None	No IPR available	TMHMM	TMhelix		coord: 139..161
None	No IPR available	TMHMM	TMhelix		coord: 96..118
IPR000932	Photosystem antenna protein-like	PFAM	PF00421	PSII	coord: 1..500 e-value: 6.3E-260 score: 863.1
IPR000932	Photosystem antenna protein-like	PANTHER	PTHR33180	FAMILY NOT NAMED	coord: 1..506
IPR036001	Photosystem antenna protein-like superfamily	SUPERFAMILY	161077	Photosystem II antenna protein-like	coord: 3..485

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-ischiensis_contig110	contig	S-ischiensis_contig110:82111..83640 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Schizocladia ischiensis KU_0333	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-ischiensis_contig110.2410.1	mRNA_S-ischiensis_contig110.2410.1	Schizocladia ischiensis KU_0333	mRNA	S-ischiensis_contig110 82111..83640 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-ischiensis_contig110.2410.1 ID=prot_S-ischiensis_contig110.2410.1|Name=mRNA_S-ischiensis_contig110.2410.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=510bp
MALPWYRVHTVVLNDPGRLIAVHLMHTALVAGWAGSMTLYELAIFDPSDP
VLNPMWRQGMFVMPFISRLGVTDSWGGWSITGESISNPGLWSFEGVALTH
IVLSGLCFLAAIWHWVYWDLELFRDPRTGEPALDLPKIFGIHLFLSGLLC
FGFGAFHVTGLFGPGIWVSDAYGVTGKVQPVAPAWGPEGFNPFNPGGIAA
HHIAAGTFGILAGVFHLTVRPPQRLYRALRMGNIETVLSSSISAVFFAAF
VTSGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVELSLNENLSESE
AWARIPDKLAFYDYIGNNPAKGGLFRAGPMDKGDGIAEAWLGHPIFRDRE
GRELSVRRMPAFFETFPVILVDNDGIIRADIPFRRAESKYSIEQVGVTVS
FYGGKLNGQSFKDAPTVKKFARKAQLGEVFEFDRTSLESDGVFRSSPRGW
YTFGHLNFALLFFLGHLWHGSRTIFRDVFTGIGSEVTEQVEFGAFQKLGD
ETTRKQGIV*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR017486	PSII_PsbB
IPR000932	PS_antenna-like
IPR036001	PS_II_antenna-like_sf