mRNA_S-ischiensis_contig11.2245.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig11.2245.1
Unique NamemRNA_S-ischiensis_contig11.2245.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
[Close]
BLAST of mRNA_S-ischiensis_contig11.2245.1 vs. uniprot
Match: A0A6H5KCF8_9PHAE (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCF8_9PHAE)

HSP 1 Score: 316 bits (810), Expect = 6.870e-98
Identity = 175/379 (46.17%), Postives = 231/379 (60.95%), Query Frame = 1 
Query:   13 MGAHRRKLRTPRPTRRRFIQIEHV----------EVGPLSPDNTPPAP------------PVHEGSSGGANPRHAQDRAYV--YHRDDPCSRLEGYWGNLNLAQEAALSELQGLVSARGLDLTPIVGDGARAL---CPAEPKELALLRFLRANKWAVEAALAQVEENLRWRREMDMEALVASPPRDVLGCGSDDALDFLFGAYYPHYHLGWDRVGRPVLVQQYGNFNTTRLKEVAPLEGLARYHAWEQEKNAELLRCRSRADGCLIETYTLILDFKGMGIGLVTGDFLWLLRTLSEMDRTYYPGRGGNTFIVNTPPLFGMVWAGIKGFMERTQARIHMHSREQDWKAALAEAIDPAHLPPEYGGTGPPLSEMPFLSVSH 1068
            MGAHRR++   R  R+R ++              E G L      PA             PV   SS G +     +R  V  YH    C+ + GY   L+ + EAAL  L+  ++   ++++P++GD   AL   CP E ++L LLRFLR N W VE   AQ+E +L WR E  + +     P +V GC S +A + L   +YPHY +G DR GRP+LVQ+YGNF+T++L+E   L GL RYHAWEQE NA+LLR  S   G L+ETY +I+DFKGM +G V  DFLWLLR LSEMDRT+YPGRGG  F++NTPPLFG+ W GI+GF+  TQA +H+   E++WKAALAEA+DPA LP +YGGT P L++ P L   H
Sbjct:    1 MGAHRRRILRQRGARKRHVKSPDTTSLEGDTDCGEDGSLGSCWEEPASRRLSRGTLIRHHPVPCSSSHGTD---NGNRRMVPPYHSGAACAEMIGYARRLSPSHEAALGGLRQWLTRESVNISPLLGDVGLALAVSCPPEEEDLVLLRFLRHNAWDVELTRAQLEASLSWRIETGVASNARREPWEVSGCASKEAFEELCRTHYPHYTIGTDRAGRPILVQKYGNFDTSKLQEFTTLPGLLRYHAWEQENNADLLRRASARTGYLVETYAVIMDFKGMSMGQVNRDFLWLLRKLSEMDRTHYPGRGGVIFVINTPPLFGLAWQGIRGFLT-TQATVHIFGVEKEWKAALAEAVDPAVLPLDYGGTAPHLADTPLLPAFH 375
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BLAST of mRNA_S-ischiensis_contig11.2245.1 vs. uniprot
Match: D8LT58_ECTSI (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT58_ECTSI)

HSP 1 Score: 260 bits (665), Expect = 1.700e-81
Identity = 126/246 (51.22%), Postives = 167/246 (67.89%), Query Frame = 1 
Query:  190 YHRDDPCSRLEGYWGNLNLAQEAALSELQGLVSARGLDLTPIVGDGARAL---CPAEPKELALLRFLRANKWAVEAALAQVEENLRWRREMDMEALVASPPRDVLGCGSDDALDFLFGAYYPHYHLGWDRVGRPVLVQQYGNFNTTRLKEVAPLEGLARYHAWEQEKNAELLRCRSRADGCLIETYTLILDFKGMGIGLVTGDFLWLLRTLSEMDRTYYPGRGGNTFIVNTPPLFGMVWAGIKGFM 918
            YH    C+ +  Y   L+ + EAAL  L+  ++   ++L+P++GD    L   CP E ++L LLRFLR N W VE   AQ+E +L WR E  + +     P +V GC S +A + L   +YPHY +G DRVGRP+LVQ+YGNF+T++L+E   L GL RYHAWEQE NA+LLR  S   G L+ETY +++DFKGM +G V  DFLWLLR LSEMDR +YPGRGG  F++NTPPLFG+VW GI+GF+
Sbjct:    5 YHPGAACAEMIDYARRLSSSHEAALGGLRQWLTRESVNLSPLLGDVGLTLAASCPPEEEDLVLLRFLRHNAWDVELTRAQLEASLSWRVETGVASNARREPWEVSGCASAEAFEELCRTHYPHYTIGTDRVGRPILVQKYGNFDTSKLQEFTTLPGLLRYHAWEQENNADLLRRTSARTGYLVETYAVVMDFKGMSMGQVNRDFLWLLRELSEMDRKHYPGRGGVIFVINTPPLFGLVWQGIRGFL 250
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BLAST of mRNA_S-ischiensis_contig11.2245.1 vs. uniprot
Match: A0A835ZHE9_9STRA (CRAL-TRIO domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHE9_9STRA)

HSP 1 Score: 174 bits (440), Expect = 1.350e-47
Identity = 104/273 (38.10%), Postives = 149/273 (54.58%), Query Frame = 1 
Query:  220 EGYWGNLNLAQEAALSELQGLVS---ARGLDLTPIVGDGARALCPAEPKELALLRFLRANKWAVEAALAQVEENLRWRREMDMEALVASPPRDVLGCGSDDALDFLFGAYYPHYHLGWDRVGRPVLVQQYGNFNTTRLKEVAPLEGLARYHAWEQEKNAELLRCRSRA--------------------DGCLIETYTLILDFKGMGIGLVTGDFLWLLRTLSEMDRTYYPGRGGNTFIVNTPPLFGMVWAGIKGFMERTQARIHMHSREQDWK 969
            +GY GNL  AQ AAL+ L+  VS    +GL     +         +E  +  LLR+LRA+ + VE  L  + EN+ WR +    AL A  P +VLG  + + L  L  A YPH+ LG DR GRPVL+ +YG F+   L        L RYH WEQE+NA LL  R+R                      GC ++ Y+LILD +G+G+G +T + + LLR ++E D  +YP R   T++VNTPPLFG++W  I+G +E + A + + S  + W+
Sbjct:   12 KGYLGNLAEAQTAALAALRARVSDGQQQGLLDISSITLSCDGYGESEDLDRCLLRYLRAHGFDVERTLVILGENVAWRAQEGTAALRAQTPAEVLGVPAAE-LRALIAARYPHWLLGDDRRGRPVLLYRYGAFDARALLRRTTARRLQRYHVWEQEQNARLLARRARXXXXXXXXXXXXXXXXXXXXXSGCDMDAYSLILDLQGLGVGQITSELVALLRYIAETDARHYPRRCATTYVVNTPPLFGVIWGAIRGCLEGSSADLRVLSDRKRWQ 283
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BLAST of mRNA_S-ischiensis_contig11.2245.1 vs. uniprot
Match: A0A7S0LSP1_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LSP1_9EUKA)

HSP 1 Score: 149 bits (375), Expect = 1.040e-37
Identity = 89/275 (32.36%), Postives = 146/275 (53.09%), Query Frame = 1 
Query:  226 YWGNLNLAQEAALSELQGLVSARGLDLTPIVGDGARALCPAEPKELALLRFLRANKWAVEAALAQVEENLRWRREMDMEALVASPPRDVLGCGSDDALDFLFGAYYPHYHLGWDRVGRPVLVQQYGNFNTTRLKEVAP--LEGLARYHAWEQEKNAELLRCRSRADGCLIETYTLILDFKGMGIGLVTGDFLWLLRTLSEMDRTYYPGRGGNTFIVNTPPLFGMVWAGIKGFMER-TQARIHMHSREQDWKAALAEAIDPAHLPPEYGGTGPPLS 1041
            Y  NL+   +A L+EL   +    ++L  +  D          + L LLR+LRAN + V+     +  N+ WR+  ++  L+   P D+LGC   D + F     +PH+H G+D+ GRP+L +Q G F+   +K++     E + RYH WEQE  + L   +S     +IET T++LD KG+ +  ++ DF  ++  + +MD+  YP   G   I+N P +F M++  +K  ++  T A+I++  +  D KA L  +I    LP  Y GT PPL+
Sbjct:   45 YIRNLSAPNQAILTELIQWIVTENINLNDLSLD-------ILDESLLLLRYLRANNFNVKKTKKHIVTNIEWRKSQNIPELMKQNPEDILGCKLADLVGF-----FPHWHSGYDKTGRPLLFKQQGAFDIKEIKKLCGGNFESMLRYHIWEQEVASRLCYEQSLKTRTIIETVTVVLDVKGLTLSSISSDFRAMMNGIIKMDQDMYPETLGKILIINAPSVFPMIFGLLKPLLDPITAAKINI--KGTDHKALLDSSIGLEFLPENYCGTLPPLT 305
[Close]
BLAST of mRNA_S-ischiensis_contig11.2245.1 vs. uniprot
Match: A0A8J5XDN7_DIALT (CRAL-TRIO domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XDN7_DIALT)

HSP 1 Score: 133 bits (334), Expect = 4.380e-32
Identity = 87/258 (33.72%), Postives = 126/258 (48.84%), Query Frame = 1 
Query:  262 LSELQGLVSARGLDLTPIVGDGAR--ALCPAEPKELALLRFLRANKWAVEAALAQVEENLRWRREMDMEALVASPPRDVLGCGSDDALDFLFGAYYPHYHLGWDRVGRPVLVQQYGNFNTTRLKEVAPLEGLARYHAWEQEKNAELLRCRSRADGCLIETYTLILDFKGMGIGLVTGDFLWLLRTLSEMDRTYYPGRGGNTFIVNTPPLFGMVWAGIKGFMER-TQARIHMHSREQDWKAALAEAIDPAHLPPEYGGT 1026
            L+EL   V ARGL       +  R  AL PAE +   L  FL    + V  ALA +  NL WR  + ++AL       V G       + +   +YP +H G DR GRPV   + G F+   + +  PLE L  +H WE+E+    LR  S   G  I+  TL+LD K  G  L++   L     L  +D   +  R G  +++N P +F   WA +  FM + T  ++ + S +  W+ AL  AI+P+ +P EYGGT
Sbjct:   14 LAELAAAVDARGL------AERVRKAALLPAEDEAGFLHHFLALRDFDVGGALAMLVANLEWRASLGLDALADMSLAQVTGVD-----ERVMAHWYPAWHDGLDRAGRPVGWAKLGAFDVAAVSKTVPLERLRMFHLWERERMCRRLRKASALRGERIDRMTLVLDLKHWGTRLMSRAALAFAEELMGLDTELFAQRVGTVYVINAPFMFSACWALLTPFMGKDTLDKVKLFSADALWRPALLAAIEPSEMPVEYGGT 260
[Close]
BLAST of mRNA_S-ischiensis_contig11.2245.1 vs. uniprot
Match: A0A7S1DS59_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DS59_HEMAN)

HSP 1 Score: 117 bits (293), Expect = 1.200e-25
Identity = 66/223 (29.60%), Postives = 114/223 (51.12%), Query Frame = 1 
Query:  373 RFLRANKWAVEAALAQVEENLRWRREMDMEALVASPPRDVLGCGSDDALDFLFGAYYPHYHLGWDRVGRPVLVQQYGNFNTTRL-KEVAPLEGLARYHAWEQEKNAELLRCRSRADGCLIETYTLILDFKGMGIGLVTGDFLWLLRTLSEMDRTYYPGRGGNTFIVNTPPLFGMVWAGIKGFMER-TQARIHMHSREQDWKAALAEAIDPAHLPPEYGGTGPP 1035
            RFLRA K  VEAA   +  ++ WR + +++ L   P  ++ G   +   +     Y+P +H G+D+ GRPVL   YGN     L  + + +E L  YH ++QE+   LL  +S      IET+  ++D KG G+ L T   +  ++ ++++D  +YP R G  +++N P      +  I  +++  T  +I +     +W+  L + +D + L   YGG  PP
Sbjct:   39 RFLRARKGNVEAAFGMLSNDVTWRVDNEIDKLAQKPVSEIAGVDEETLWN-----YFPAWHQGFDKQGRPVLYSAYGNCEVDTLCAKGSSVEKLLMYHVFQQEQCVGLLASQSELLNRRIETFFFVVDAKGWGLRLWTRKAMAFIKGMADIDGAHYPERLGQMYVINCPRALVWTYRVITSWVDPVTSQKIQLLGGPSEWQHLLTQHVDASQLCSVYGGNAPP 256
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BLAST of mRNA_S-ischiensis_contig11.2245.1 vs. uniprot
Match: A0A820AV61_9BILA (Hypothetical protein n=1 Tax=Adineta steineri TaxID=433720 RepID=A0A820AV61_9BILA)

HSP 1 Score: 90.9 bits (224), Expect = 3.340e-17
Identity = 61/218 (27.98%), Postives = 102/218 (46.79%), Query Frame = 1 
Query:  367 LLRFLRANKWAVEAALAQVEENLRWRREMDMEALVASPPRDVLGCGSDDALDFLFGAYYPHYHLGWDRVGRPVLVQQYGNFNTTRLKEVAPLEGLARYHAWEQEKNAELLRCRSRADGCLIETYTLILDFKGMGIGLVTGDFLWLLRTLSEM---DRTYYPGRGGNTFIVNTPPLFGMVWAGIKGFMER-TQARIHMHSREQDWKAALAEAIDPAHLP 1008
            + RFLRA KW     +  + E ++WR +  ++         +L   S  +   LF    P    G  +  +P+ +++ G  N   + +   +E + + + +  E N +  R  SR  G  IET+ +I D  GM +     D   LL +  E+   D  YYP R G TF++N P +F ++W  IK F++  T+ +IH+  +  +    L E ID   LP
Sbjct:   44 IYRFLRAKKWNTTQTITSILEMIQWRIDNHVDT--------ILNDQSVISRMKLFEKLVPTAFHGHTKSYQPLYIEKTGQMNVDEILKTFTIEEMIQGYIYGLEYNCQQARDFSRQVGQHIETFAIIYDLNGMKL-----DIRKLLHSCKEIFYVDENYYPKRSGQTFVLNPPTVFPVIWNMIKHFLDLVTKTKIHVLRKGHETTETLLEYIDSEQLP 248
[Close]
BLAST of mRNA_S-ischiensis_contig11.2245.1 vs. uniprot
Match: A0A1Y1WTT9_9FUNG (CRAL-TRIO domain-containing protein n=1 Tax=Anaeromyces robustus TaxID=1754192 RepID=A0A1Y1WTT9_9FUNG)

HSP 1 Score: 90.5 bits (223), Expect = 2.030e-16
Identity = 76/273 (27.84%), Postives = 123/273 (45.05%), Query Frame = 1 
Query:  217 LEGYWGNLNLAQEAALSELQGLVSARGLDLTPIVGDGARALCPAEPKELALLRFLRANKWAVEAALAQVEENLRWRREMDMEALVASPPRDVLGCGSDDALDFLFGAYYPHYHLGWDRVGRPVLVQQYGNFNTTRLKEVAPLEGLARYHAWEQEKNAELLRCR----SRADGCLIETYTLILDFKGMGIGLVTGDFLWLLRTLSEMDRTYYPGRGGNTFIVNTPPLFGMVWAGIKGFMERTQARIHMHSREQDWKAALAEAIDPAHLPPEYGG 1023
            L+G +GNL   +E  L  L  ++  +  DL           C         LRFLRA  + +E          +WR+  +++ L  +     L               YP ++   DR+GRP+ V+Q+GNF+  +L EV   + L +Y   + E     LR R    S A G  +ET   I+D K + +   +  F +L +T +++   YYP   GN F++N P LF   W  IKG ++   A   +    ++++  L +  +P +LP  YGG
Sbjct:    6 LKGRYGNLTTYEEQVLRSL--ILRVKKEDL----------YCKERHDIHYFLRFLRARDFDLEKTFLMFSNCEKWRKTNNIDELYETFTFPEL---------HKVQKIYPKFYHSIDRLGRPIYVEQFGNFSIKKLFEVTNEDKLLKYFILDYETG---LRKRFPSCSNAAGHHVETGLTIMDLKDVSLLQFSKCFNFLKKT-TKIASDYYPECMGNLFVINAPKLFSGCWKLIKGILDPVTAE-KIQILGKNYEHTLLKYANPENLPKMYGG 252
[Close]
BLAST of mRNA_S-ischiensis_contig11.2245.1 vs. uniprot
Match: A0A815SHN1_9BILA (Hypothetical protein n=1 Tax=Adineta steineri TaxID=433720 RepID=A0A815SHN1_9BILA)

HSP 1 Score: 80.5 bits (197), Expect = 2.550e-13
Identity = 58/220 (26.36%), Postives = 103/220 (46.82%), Query Frame = 1 
Query:  373 RFLRANKWAVEAALAQVEENLRWRREMDMEALVASPPRDVLGCGSDDALDFLFGAYYPHYHLGWDRVGRPVLVQQYGNFNTTRLKEVAPLEGLARYHAWEQEKNAELLRCRSRADGCLIETYTLILDFKGMGIGLVTGDFLWLLRTLSEM---DRTYYPGRGGNTFIVNTPPLFGMVWAGIKGFMER-TQARIHMHSREQDWKAALAEAIDPAHLPPEYG 1020
            RFLRA KW     +  + E ++WR +  ++ ++    + V+       ++         +H G  +  +P+ +++        + +   +E + + H +  E N +  R  SR  G  IET+ +I D  GM +     D   LL +  E+   D +YYP R G TF++N P +F ++W  IK F++  T+ +I +  +  +    L E ID   L  EYG
Sbjct:   46 RFLRAKKWNTTQTITSILEMIQWRIDNHVDTILND--QSVIS-----QMELFEKLVLTAFH-GHTKAYQPLYIEKTDQMYVDEILKTFTIEEMIQGHIYWLEYNCQQARDFSRQLGQHIETFAIIYDLNGMKL-----DIRKLLHSCKEIFYVDESYYPERLGQTFVLNPPTVFPVIWNLIKHFLDPVTKTKILVLKKGHETTETLLEYIDSEQLSCEYG 252
[Close]
BLAST of mRNA_S-ischiensis_contig11.2245.1 vs. uniprot
Match: A0A815EBS7_ADIRI (Hypothetical protein n=3 Tax=Adineta ricciae TaxID=249248 RepID=A0A815EBS7_ADIRI)

HSP 1 Score: 80.1 bits (196), Expect = 8.260e-13
Identity = 61/232 (26.29%), Postives = 113/232 (48.71%), Query Frame = 1 
Query:  358 ELALLRFLRANKWAVEAALAQVEENLRWRREMDMEALVASPPRDVLGCGSDDALDFLFGAYYPHYHLGWDRVGRPVLVQQYGNFNTTRLKEVAPLEGLARYHAWEQEKNAELLRCRSRADGCLIETYTLILDFKGMGIGLVTGDFLWLLRTLSEMDRTYYPGRGGNTFIVNTPPLFGMVWAGIKGFMERT-QARIHMHSREQDWKAALAEAIDPAHLPPEYGGTGPPLSEMP 1050
            ++ +LR+LRA KW ++AA+ Q+ E L+WR+E  ++ L+     ++        LD +       Y++G+D+ GRP+    Y +     +K+  P+E   ++  +  E   +LL+         IET T+++D  G G+  +  +   L++    +   +YP   G   I+++P +F   W  IK +++   Q +IH     QD    L E I P+++P    G  P    +P
Sbjct:   64 DVLILRWLRARKWDIDAAVQQLMETLKWRKESTVDNLLLKGENEL-------NLDEI--QTNKSYYMGYDKAGRPI---SYIHVRE-HIKDQFPIEQTEKFGIFSVEIGRKLLKEP-------IETGTVVIDMSGFGMNNMDYN---LVKYFLHLLENFYPESLGLALIIHSPLIFYSCWTVIKHWLDPVIQNKIHFLRNNQD----LLEFIHPSNIPKCLQGNHPDFQYIP 268
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig11.2245.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KCF8_9PHAE6.870e-9846.17CRAL-TRIO domain-containing protein n=1 Tax=Ectoca... [more]
D8LT58_ECTSI1.700e-8151.22CRAL-TRIO domain-containing protein n=1 Tax=Ectoca... [more]
A0A835ZHE9_9STRA1.350e-4738.10CRAL-TRIO domain-containing protein n=1 Tax=Tribon... [more]
A0A7S0LSP1_9EUKA1.040e-3732.36Hypothetical protein (Fragment) n=1 Tax=Coccolithu... [more]
A0A8J5XDN7_DIALT4.380e-3233.72CRAL-TRIO domain-containing protein n=1 Tax=Diacro... [more]
A0A7S1DS59_HEMAN1.200e-2529.60Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A820AV61_9BILA3.340e-1727.98Hypothetical protein n=1 Tax=Adineta steineri TaxI... [more]
A0A1Y1WTT9_9FUNG2.030e-1627.84CRAL-TRIO domain-containing protein n=1 Tax=Anaero... [more]
A0A815SHN1_9BILA2.550e-1326.36Hypothetical protein n=1 Tax=Adineta steineri TaxI... [more]
A0A815EBS7_ADIRI8.260e-1326.29Hypothetical protein n=3 Tax=Adineta ricciae TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig11contigS-ischiensis_contig11:2242129..2247767 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score261.9
Seed ortholog evalue5e-67
Seed eggNOG ortholog2880.D8LT58
EggNOG free text desc.macromolecule localization
EggNOG OGsKOG1471@1,KOG1471@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionCRAL-TRIO domain
Ec32 orthologEc-12_005330.1
Exons6
Model size1256
Cds size1242
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815609.3520372-UTR-S-ischiensis_contig11:2242128..22421401622815609.3520372-UTR-S-ischiensis_contig11:2242128..2242140Schizocladia ischiensis KU_0333UTRS-ischiensis_contig11 2242129..2242140 +
1695739801.35741-UTR-S-ischiensis_contig11:2242128..22421401695739801.35741-UTR-S-ischiensis_contig11:2242128..2242140Schizocladia ischiensis KU_0333UTRS-ischiensis_contig11 2242129..2242140 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815609.3659496-CDS-S-ischiensis_contig11:2242140..22423831622815609.3659496-CDS-S-ischiensis_contig11:2242140..2242383Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 2242141..2242383 +
1695739801.371897-CDS-S-ischiensis_contig11:2242140..22423831695739801.371897-CDS-S-ischiensis_contig11:2242140..2242383Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 2242141..2242383 +
1622815609.3785603-CDS-S-ischiensis_contig11:2243319..22434841622815609.3785603-CDS-S-ischiensis_contig11:2243319..2243484Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 2243320..2243484 +
1695739801.387499-CDS-S-ischiensis_contig11:2243319..22434841695739801.387499-CDS-S-ischiensis_contig11:2243319..2243484Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 2243320..2243484 +
1622815609.390174-CDS-S-ischiensis_contig11:2243695..22439051622815609.390174-CDS-S-ischiensis_contig11:2243695..2243905Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 2243696..2243905 +
1695739801.3973258-CDS-S-ischiensis_contig11:2243695..22439051695739801.3973258-CDS-S-ischiensis_contig11:2243695..2243905Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 2243696..2243905 +
1622815609.4008079-CDS-S-ischiensis_contig11:2245632..22457381622815609.4008079-CDS-S-ischiensis_contig11:2245632..2245738Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 2245633..2245738 +
1695739801.4074209-CDS-S-ischiensis_contig11:2245632..22457381695739801.4074209-CDS-S-ischiensis_contig11:2245632..2245738Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 2245633..2245738 +
1622815609.4175441-CDS-S-ischiensis_contig11:2247006..22471431622815609.4175441-CDS-S-ischiensis_contig11:2247006..2247143Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 2247007..2247143 +
1695739801.4204953-CDS-S-ischiensis_contig11:2247006..22471431695739801.4204953-CDS-S-ischiensis_contig11:2247006..2247143Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 2247007..2247143 +
1622815609.4274848-CDS-S-ischiensis_contig11:2247386..22477671622815609.4274848-CDS-S-ischiensis_contig11:2247386..2247767Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 2247387..2247767 +
1695739801.434053-CDS-S-ischiensis_contig11:2247386..22477671695739801.434053-CDS-S-ischiensis_contig11:2247386..2247767Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 2247387..2247767 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig11.2245.1prot_S-ischiensis_contig11.2245.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig11 2242141..2247767 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig11.2245.1

>prot_S-ischiensis_contig11.2245.1 ID=prot_S-ischiensis_contig11.2245.1|Name=mRNA_S-ischiensis_contig11.2245.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=414bp
MGAHRRKLRTPRPTRRRFIQIEHVEVGPLSPDNTPPAPPVHEGSSGGANP
RHAQDRAYVYHRDDPCSRLEGYWGNLNLAQEAALSELQGLVSARGLDLTP
IVGDGARALCPAEPKELALLRFLRANKWAVEAALAQVEENLRWRREMDME
ALVASPPRDVLGCGSDDALDFLFGAYYPHYHLGWDRVGRPVLVQQYGNFN
TTRLKEVAPLEGLARYHAWEQEKNAELLRCRSRADGCLIETYTLILDFKG
MGIGLVTGDFLWLLRTLSEMDRTYYPGRGGNTFIVNTPPLFGMVWAGIKG
FMERTQARIHMHSREQDWKAALAEAIDPAHLPPEYGGTGPPLSEMPFLSV
SHSSSDGGGAPIAAATAPAATARPGAPESAAPAATCHQCFIGACNGGGRG
CCRRDDKGEGSAGR
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mRNA from alignment at S-ischiensis_contig11:2242129..2247767+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig11.2245.1 ID=mRNA_S-ischiensis_contig11.2245.1|Name=mRNA_S-ischiensis_contig11.2245.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=5639bp|location=Sequence derived from alignment at S-ischiensis_contig11:2242129..2247767+ (Schizocladia ischiensis KU_0333)
TGTGGAAAAGGCATGGGAGCTCATCGGCGGAAGCTGCGAACGCCTCGACC
CACTCGGCGTCGCTTCATTCAAATCGAGCATGTTGAGGTAGGGCCTCTGT
CTCCGGATAACACACCCCCAGCGCCCCCTGTCCATGAAGGCTCCAGTGGA
GGCGCCAACCCCCGCCATGCACAAGATCGTGCGTATGTTTACCACAGGGA
CGACCCGTGCTCACGTCTTGAGGGCTATTGGGGAAACCTCAACTTGGCGC
AGGAGGTACGTACTTCGAAGTATGCGTGCGCTTTTTCAAGCGTTCTTGTT
GGGCAGGCCTTTTCAAGGGGTTCCGCGACCGTACCGGAAGTAAAATCGGA
GAACATGCAGTGCCCACAGCTTGTGCAACTGTCGACAGAAACCGTGATGA
GCTTGAAGCCCAAGGCGGTTGCTGTCAGGACCGATGTGTGCTCGGCCTTG
CAATTTGCCGGGCCCAAAGCTCTGCCCCTGAATATCGGCCAAGCAACCGC
CATGCACTTGGCACCGACCAGCATTTGAAAAGGCACTACGGCATGGAATG
TGTCAAACATTTACCCGTCTGGCTGCCAAATTGGACTGAATTGACTTTCA
TGTACTGTAGTTGAAGCACAGTACTTCGAAGCACCCAAACTCCGTGTAGT
ACACGTCAAAAAAGTGCATTGAAGTTCTTGCTTGAGTAAGTGAACACTTA
CTTGAAGTGCAGCACTATGAGAGCATTTTGATCGGTTTGCCCCTAGCAAG
GATGCAGCTCCGATTAGCGCACAACATGTTGCGTGAAAATGGCCTGTCGG
TAGTACTTCAAGTACAAGCCGAACCGCAGCAAGTTTCGTATCAAGCTACT
GCTGCAGCACGCGTTCCCCTCTAAGGGCTGCGAGCCCCCGCGGGTCGCCC
CACAAACGTGACGCTGCTCGCACCAAAAAGCTACTGCAGCATCGTTGCCC
TCTAATTCTTAATAGGGCACTTTGGGCGCAATTTCTCATGAAGAAAAAAA
TGGTTTTCTTGCGTTTTCTTTCAACCACTTTTTTTAAAACTCTCTTTTAA
AAGTATAGCAAAGACAAATCGTTGAAAAAAACTCGCTCTTCACGAGAAAA
TAGCGCCCAAAGTGCCCCGTTAAAAATGGCCCTAAGGCTCACGAGCCCCT
GCGGGCCGCCCCGCAAAACGTGACGCTCCTCGCGCATGCAGGCCGCCCTG
TCCGAGCTCCAGGGCCTGGTGTCCGCACGGGGCCTGGATCTGACACCCAT
CGTGGGCGACGGCGCCCGCGCCTTGTGCCCCGCGGAGCCCAAGGAGCTGG
CGCTGCTGCGCTTCCTGCGGGCCAACAAGTGGGCCGTGGAGGCCGCGCTC
GCGCAGGTGGCAGTGATGGAATATCCAAGCGAATCAACCTATTCATCGAC
AGTGCTGATCTATTTTGAGTGGTAGTACTGACCTGTACATCTGTCGATAG
TCGATATTCGATAGTTTGACCCACACTGAATCCAAGTAGAGTAGTTGGTA
ACGCCACCCACAAAATCAGCGAGAGCCCGATAACTATCTACTGATCGATA
TTCCATCACTGGCGCAGGTGGAGGAGAACCTGCGCTGGAGGAGGGAGATG
GATATGGAGGCCCTGGTGGCAAGCCCGCCGCGAGACGTGCTCGGGTGCGG
CAGCGACGACGCGCTGGACTTCCTATTCGGGGCCTACTACCCGCACTACC
ACCTCGGGTGGGACAGGGTGGGGCGGCCCGTGCTGGTGCAGCAGTACGGG
AACTTCAACACCACGCGGTTGAAGGAGGTGAGAGCGGGAAGCTGGGTAGT
CTGCAGCGCTGTGCTGTACTGCAGCTGGTTTTGCGTGCTGCTGGTACGTG
CGTAGGTGGCGCACGTCCCCTGGAGGCGCGACACAAAGGAGCGGCAGGTT
CAGTTTGCATAGTACTGGCAAAACAAGTACTGTACGAGTACGAGTACGTA
GCTGGTGCGTACTACGTAGTATATATACATCTACTGGTGTGACAAGTACT
GTACGAGTACGAGCACGTAGCTGGTGCAGCTAAGTACACACAGTTTCAAA
GGCGCATGCCTCCTCAGGCTCAACAGAAGTAGGGCAACTTGCAGCACCGC
CCGGCTGTGAAGCAAGTGCGGGGAGAGCTGCTGTGCTTTGCTCGTAGCTG
ATTTGTATGATGTGCTGCCTCTCTGTCTCGGTCGAGCCGCGCGGTCAATG
GTCTCGGGACTACGGCCAGCTCTGTTCGATGTTGAGTGCGAGTACATGTT
AGTATATGTATATATGTGTGTGTGTGTACTCACGTTGTGCTTGCCATAGT
CCCGAGACCATTGGTCATATATATATATGTATGTACTCACGTGGTGCTTG
CCGTAGTCCCGAGACCATTGACCCCATAACATATATATATACTCGTATGT
ACTCACGTTGTGCTGGCCGCAGTCCCGAGACCATTGACCATTTACATGTA
CTCGTATACGGGCATGATGCGTAGCTGGTGCAGTGGCGAGTAGTTCCGCG
CTCGGACGCCTTCTCGGAGGCGTACAATACCATGGGATGGGGACGGTGGT
GTGCTCTGAAACTGCCGGGGATTGCTGAGGGATTGTGTGCAGTAGCGGCA
GGCCTGCACGCTCGACTGATACTTCCCAAGTACTTCCGGAAGTACTGTCC
AAAGCACTACAGTACTATACTACAGTAGGGCTCCGTTTACAATCACCCGA
TTTCATATGACTTTCTTATATGTGCCCACATTGTGCATGCCGTAGTCCCG
AGACCATTGATTTTTAGGAAGTAAATAGGACAGAAGTAGGACCGGCACAG
CACATTTATGAACCCCCGAGGCGGGTGCAATACACAATAGAACAGTGCAG
TATATACTGTACATATGTCTGTCTAGGCGAGTGGTCTACCGACGGCTCTC
GCGAGCCCAAGGTCGCGAGTTCGATTCCCAGTGTGTGGAGTCGGTTTTTC
CGCGAAAAATGGACTCCTCCCGAAACACGCGCAAAATTGAAAAAATCGTG
ATCGCCGTACCGGCTTGTCGGCCTCGAGCCCAATGGCAAAGTCGGGATCG
GTGCCTGCGCCTGTCCGGTGAAAACCCGGGATGCTCCGGCCCGGCGTAGT
AGGGCCGCGTGGCCAATGGCCGCAAGGCTACCCCAAATGGGGACTGACCT
GGGTCAGTGGAGTATACTGGCTCGAGTCGGTGGCAAGCACAGGGTGGGAT
CCCCATCTGCCATGAGTACACACGTATGTACTCACGTTGTGCTTGCCGTA
GTCCCGAGACCATTGACCATTCAATATTGTACAAAATCAATGTAGTCCTT
GCTCGCCTACTCTACCCCTACACCAAAACGTCGGAGGACAACTACAGTAC
GAAGTGCTCGAGTACTTCGAAGTACTTATTATTACGTGGAAGTATATGGT
ACGGTACCCACAACGTTGTCGCCGCCATCACTGCAGTGTACTGCCGGGCT
CTACTCCAGGAGTATTGGGTTTTCACCCCCCCCCCCAACCCCCGGTGCAC
AAAGGTGGCTCCGCTCGAGGGCCTGGCGAGGTACCACGCGTGGGAGCAGG
AGAAGAATGCGGAGCTTCTGCGGTGCAGGTCGCGGGCGGATGGCTGCCTC
ATTGAGACGTGTGAGTGTGGCCTGCGTTGCTGCCGACTGTGAGCGGCCGT
GTCGAGTACTCCAAGTATGCGATCCTCGCACTGTGCTTGCCACGGCACTT
CTAGCTCGTTGGCCTTCCAAAGAACAGTACAGTAGAGTGCTACCCACCAC
AGCCCATATGTCCTCCTCGCCCTCCTCCTCCTCCTCCTCCCCCCCCTCCT
GCTCCTCCTCCGCCTCCTCCTTCTCCTCCTGCTCCTCCTGCTCCTCCTCC
TCCTCCTCCTCCTCCTCCGCCGCCGCCGCCGCCGCCGCCGCCTCTTCCCC
AGCCTTCCCACTCCCTCCGTCTCCTATTCCCCTCAGTACTCCAGTCACTG
CTGCTTTGCGGAAGGTGCACCGTTGAGGTCCCTTGTAGTGTAGCGACGCG
ATCGTCCGTAAGGTCGCTTGCCCAATCATATTTACATACTTCGAAGTACA
TAGGTATACTTCGGAAGTACATATACTACGTAGTATGTATGTATATGTAC
TCACGTGGTGCTTGCCGTAGTCCCGAGACCATTGACCCCGCGCCTCGTTC
GAGGCATAGAATTCACACTCGTACACAGCACAGACGTACAAAGTCTTATT
AGTTCTTGGCCTAGGTAAACTTCGGGAGTACATAGAACTCATACTTCTAC
ACAGCACGGAGTACAAAGTCTTGTTAGTTCTTGGCCCGGGGCCAGCGACT
CTATCTACAGTACACACCCTCCTCTTGGGCTCGGAGGACAACAATTTGGA
AAGATGTTCTCTCATACGTGTTTTTATATACCTCGAAGCCCTGCGTACCA
CATGTTTACTGGACTGAAACCGTGCCTGATGGAAGCGTGCCGGGCGCGTT
TTAAGCACGAGCCCTGCAGATTGAGCGAAAGTCTTACAACACGTGTGCCC
TTCCTCGAGGTGAGCTCAAGGTCCTGGCACTTCGCACGCGCGCGCGCGCA
CACACACACACACACATGTGTTCCCTATGTACTGTGTCGTTTTCAAGCAC
TCTACTGTCACCTGCATCGATGTGTGTACAGAGTACTCAAGTATGCATTG
AGGTGGGGTACCAGTGTGTGTGTGTGTGTGTGTGTGCGTGTGTGTGCGCA
TACTGTACTCGCGTTGTGCTTGCCATAGCCGAGACACCATTGACCAGGCA
CACCGAAGCGCCAAGCTACGTACGCTGGACGTTGGTTTACTCGCAGATAC
ATCTACTGTACCGCCGTCTGCTAAGGGCCAAGTTTGACAAGTCGCCCGGG
CTCGCTGCTGCCTTGCCTCCCTCAATAGACACGCTCATCCTGGACTTCAA
GGGCATGGGTATTGGGCTGGTGACGGGCGACTTCCTGTGGCTGCTGCGCA
CACTCTCAGAGATGGACCGCACCTACTACCCGGGCCGGGGCGGGAATACG
TTCATCGTTAACACGGTGAGATACGCTGTTGCTTTCGTTGTACTCGGTGT
TGACTATGGAGTGCCTGTAGTTGTTCGTGTGATAGTACTCTATGTAGTAC
GTCGAGGTAATTTAGTACAGTAGTACGTACTGTAGTGTACCAGTACACGG
CTCAGGCAGTGCTGTACCGTATGATACGAGTACTTGTAGTGCTCACGTGG
CTCCTGCCTCACCCCCGTGCACGCACCCGCCACAAAATACCCCTCGGTGC
TGCCACAGCCGCCGCTGTTTGGGATGGTCTGGGCGGGCATCAAGGGATTC
ATGGAGCGCACCCAGGCGCGCATCCACATGCACTCCCGCGAGCAGGACTG
GAAGGCGGCGCTGGCAGAAGCCATCGACCCCGCCCATCTCCCGCCCGAGT
ACGGGGGCACCGGCCCGCCGCTGTCCGAGATGCCCTTCCTGTCCGTTTCC
CACAGCTCCTCCGACGGCGGCGGGGCCCCCATTGCCGCCGCCACCGCCCC
TGCCGCCACGGCCAGGCCAGGTGCCCCGGAGTCCGCCGCGCCGGCCGCCA
CATGCCACCAGTGTTTCATTGGCGCGTGCAATGGTGGCGGCCGTGGTTGC
TGCCGCCGCGATGACAAGGGGGAGGGCAGCGCGGGGCGG
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Coding sequence (CDS) from alignment at S-ischiensis_contig11:2242129..2247767+

>mRNA_S-ischiensis_contig11.2245.1 ID=mRNA_S-ischiensis_contig11.2245.1|Name=mRNA_S-ischiensis_contig11.2245.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2484bp|location=Sequence derived from alignment at S-ischiensis_contig11:2242129..2247767+ (Schizocladia ischiensis KU_0333)
ATGGGAGCTCATCGGCGGAAGCTGCGAACGCCTCGACCCACTCGGCGTCG
CTTCATTCAAATCGAGCATGTTGAGGTAGGGCCTCTGTCTCCGGATAACA
CACCCCCAGCGCCCCCTGTCCATGAAGGCTCCAGTGGAGGCGCCAACCCC
CGCCATGCACAAGATCGTGCGTATGTTTACCACAGGGACGACCCGTGCTC
ACGTCTTGAGGGCTATTGGGGAAACCTCAACTTGGCGCAGGAGATGGGAG
CTCATCGGCGGAAGCTGCGAACGCCTCGACCCACTCGGCGTCGCTTCATT
CAAATCGAGCATGTTGAGGTAGGGCCTCTGTCTCCGGATAACACACCCCC
AGCGCCCCCTGTCCATGAAGGCTCCAGTGGAGGCGCCAACCCCCGCCATG
CACAAGATCGTGCGTATGTTTACCACAGGGACGACCCGTGCTCACGTCTT
GAGGGCTATTGGGGAAACCTCAACTTGGCGCAGGAGGCCGCCCTGTCCGA
GCTCCAGGGCCTGGTGTCCGCACGGGGCCTGGATCTGACACCCATCGTGG
GCGACGGCGCCCGCGCCTTGTGCCCCGCGGAGCCCAAGGAGCTGGCGCTG
CTGCGCTTCCTGCGGGCCAACAAGTGGGCCGTGGAGGCCGCGCTCGCGCA
GGCCGCCCTGTCCGAGCTCCAGGGCCTGGTGTCCGCACGGGGCCTGGATC
TGACACCCATCGTGGGCGACGGCGCCCGCGCCTTGTGCCCCGCGGAGCCC
AAGGAGCTGGCGCTGCTGCGCTTCCTGCGGGCCAACAAGTGGGCCGTGGA
GGCCGCGCTCGCGCAGGTGGAGGAGAACCTGCGCTGGAGGAGGGAGATGG
ATATGGAGGCCCTGGTGGCAAGCCCGCCGCGAGACGTGCTCGGGTGCGGC
AGCGACGACGCGCTGGACTTCCTATTCGGGGCCTACTACCCGCACTACCA
CCTCGGGTGGGACAGGGTGGGGCGGCCCGTGCTGGTGCAGCAGTACGGGA
ACTTCAACACCACGCGGTTGAAGGAGGTGGAGGAGAACCTGCGCTGGAGG
AGGGAGATGGATATGGAGGCCCTGGTGGCAAGCCCGCCGCGAGACGTGCT
CGGGTGCGGCAGCGACGACGCGCTGGACTTCCTATTCGGGGCCTACTACC
CGCACTACCACCTCGGGTGGGACAGGGTGGGGCGGCCCGTGCTGGTGCAG
CAGTACGGGAACTTCAACACCACGCGGTTGAAGGAGGTGGCTCCGCTCGA
GGGCCTGGCGAGGTACCACGCGTGGGAGCAGGAGAAGAATGCGGAGCTTC
TGCGGTGCAGGTCGCGGGCGGATGGCTGCCTCATTGAGACGTGTGGCTCC
GCTCGAGGGCCTGGCGAGGTACCACGCGTGGGAGCAGGAGAAGAATGCGG
AGCTTCTGCGGTGCAGGTCGCGGGCGGATGGCTGCCTCATTGAGACGTAC
ACGCTCATCCTGGACTTCAAGGGCATGGGTATTGGGCTGGTGACGGGCGA
CTTCCTGTGGCTGCTGCGCACACTCTCAGAGATGGACCGCACCTACTACC
CGGGCCGGGGCGGGAATACGTTCATCGTTAACACGACACGCTCATCCTGG
ACTTCAAGGGCATGGGTATTGGGCTGGTGACGGGCGACTTCCTGTGGCTG
CTGCGCACACTCTCAGAGATGGACCGCACCTACTACCCGGGCCGGGGCGG
GAATACGTTCATCGTTAACACGCCGCCGCTGTTTGGGATGGTCTGGGCGG
GCATCAAGGGATTCATGGAGCGCACCCAGGCGCGCATCCACATGCACTCC
CGCGAGCAGGACTGGAAGGCGGCGCTGGCAGAAGCCATCGACCCCGCCCA
TCTCCCGCCCGAGTACGGGGGCACCGGCCCGCCGCTGTCCGAGATGCCCT
TCCTGTCCGTTTCCCACAGCTCCTCCGACGGCGGCGGGGCCCCCATTGCC
GCCGCCACCGCCCCTGCCGCCACGGCCAGGCCAGGTGCCCCGGAGTCCGC
CGCGCCGGCCGCCACATGCCACCAGTGTTTCATTGGCGCGTGCAATGGTG
GCGGCCGTGGTTGCTGCCGCCGCGATGACAAGGGGGAGGGCAGCGCGGGG
CGGCCGCCGCTGTTTGGGATGGTCTGGGCGGGCATCAAGGGATTCATGGA
GCGCACCCAGGCGCGCATCCACATGCACTCCCGCGAGCAGGACTGGAAGG
CGGCGCTGGCAGAAGCCATCGACCCCGCCCATCTCCCGCCCGAGTACGGG
GGCACCGGCCCGCCGCTGTCCGAGATGCCCTTCCTGTCCGTTTCCCACAG
CTCCTCCGACGGCGGCGGGGCCCCCATTGCCGCCGCCACCGCCCCTGCCG
CCACGGCCAGGCCAGGTGCCCCGGAGTCCGCCGCGCCGGCCGCCACATGC
CACCAGTGTTTCATTGGCGCGTGCAATGGTGGCGGCCGTGGTTGCTGCCG
CCGCGATGACAAGGGGGAGGGCAGCGCGGGGCGG
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