mRNA_S-ischiensis_contig11.2094.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig11.2094.1 vs. uniprot
Match: D8LPW9_ECTSI (Putative S-adenosylmethionine-dependent methyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPW9_ECTSI) HSP 1 Score: 345 bits (886), Expect = 2.010e-111 Identity = 181/283 (63.96%), Postives = 224/283 (79.15%), Query Frame = 3
Query: 216 QGDDAE-GDAKGPRRGARRSGLQRDGGGLPAEPVYAPRPPRH---PVSGPSRK-RVRAQGKEREQGINNPNKLRVSGGSARGRKLDSPQVFLRPMMGKVKEALYSTLTGFGVFEDENCAFLDLFAGSGSVGIEALSRGAARATFVDLSKDCCEVAMRNAEKCGFGERACAVRGDVMDVLYNPLRHSLTEPYSVVTVTPPYEEVVYADLIKAVTDSDLVREDTLVVVEYPVELGCLPHAIGEGRLVGLRNRRYGRTVLAVYIYRPSGRL-DLADSRPEEFVSLR 1046
QGDD + + RR AR + L+RD GLP+E +YAPR + V G R +VR QG+ERE INN +L+V+GG A+GR+L+SP VFLRPMM KVKEAL+STL GFGVFE E+ FLDLF+GSGSVGIEALSRGA ATFVD +KDCC+V +RNA CGF ++A AV+GDVMDVLYNP R+ L P+ V+TVTPPYEEVVY +L+KA++ SDLV +DTLVV+EYPVELGC+PHAIG+G +VGLRNRRYGRTV+ V++Y PSG+ D+ DSRPEEFVS++
Sbjct: 79 QGDDESFAEDQRYRRKARGANLRRDDTGLPSEKIYAPRQSAYGTPTVGGTGRPGKVRPQGEEREVSINNAARLKVAGGIAKGRRLESPDVFLRPMMAKVKEALFSTLMGFGVFETEDARFLDLFSGSGSVGIEALSRGAGHATFVDFAKDCCDVCLRNANLCGFSDQAKAVKGDVMDVLYNPRRYGLDAPFDVITVTPPYEEVVYTELVKALSVSDLVAQDTLVVIEYPVELGCMPHAIGDGTMVGLRNRRYGRTVVGVWVYLPSGQFGDMLDSRPEEFVSIK 361
BLAST of mRNA_S-ischiensis_contig11.2094.1 vs. uniprot
Match: A0A835Z8R5_9STRA (Putative S-adenosylmethionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8R5_9STRA) HSP 1 Score: 331 bits (848), Expect = 7.100e-106 Identity = 183/280 (65.36%), Postives = 210/280 (75.00%), Query Frame = 3
Query: 228 AEGDAKGPRRGARRSGLQRDG-GGLPAEPVYAPR----PPRHPVSGPS--RKRVRAQGKEREQGINNPNKLRVSGGSARGRKLDSPQVFLRPMMGKVKEALYSTLTGFGVFEDENCAFLDLFAGSGSVGIEALSRGAARATFVDLSKDCCEVAMRNAEKCGFGERACAVRGDVMDVLYNPLRHSLTEPYSVVTVTPPYEEVVYADLIKAVTDSDLVREDTLVVVEYPVELGCLPHAIGEGRLVGLRNRRYGRTVLAVYIYRPSGRLDLADSRPEEFVSLR 1046
AE DAK R R + L+RD GLP E VYAPR + +SG S KRVRAQG ERE+G+NN +LRV GG A+GR+L+SP+V+LRPMMGKVKEALY+TL FG+FE FLDLF GSGSVG+EALSRGA+ TFVDL+ +CC VA RNA CGF + AVRGDV+ VL P L PY VVT+TPPY EVVY DLI A S LVREDT+VV+EYPVELGCLPH IG+GRLVGLRNRRYGRTVL VYI RP+GRL LADSRPEEF+SL+
Sbjct: 70 AEKDAKKRLRRPRGAHLKRDEVTGLPIEAVYAPRFSPYLTKKKLSGTSGGSKRVRAQGSEREEGLNNAQRLRVLGGVAKGRRLESPEVYLRPMMGKVKEALYNTLLSFGLFEGAGPRFLDLFCGSGSVGVEALSRGASHVTFVDLAAECCAVAERNAVACGFEGQGSAVRGDVLRVLSQPSAFGLDAPYDVVTITPPYAEVVYGDLIAAAASSPLVREDTIVVIEYPVELGCLPHVIGDGRLVGLRNRRYGRTVLGVYICRPTGRLYLADSRPEEFISLK 349
BLAST of mRNA_S-ischiensis_contig11.2094.1 vs. uniprot
Match: A0A6V1VNJ1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1VNJ1_HETAK) HSP 1 Score: 285 bits (728), Expect = 1.830e-88 Identity = 156/281 (55.52%), Postives = 198/281 (70.46%), Query Frame = 3
Query: 264 RRSGLQRDGGGLPAEPVYAPRPPRHPVSGPSRK----------------RVRAQGKEREQGINNPNKLRVSGGSARGRKLDSPQVFLRPMMGKVKEALYSTLTGFGVFEDENCAFLDLFAGSGSVGIEALSRGAARATFVDLSKDCCEVAMRNAEKCGF----GERACAVRGDVMDVLYNPLRHSLTEPYSVVTVTPPYEEVVYADLIKAVTDSDLVREDTLVVVEYPVELGCLPHAIGEGRLVGLRNRRYGRTVLAVYIYRPSGRLDLADSRPEEFVSLR 1046
R++ L ++ G+P + V APRP R V+ ++ R+RAQGK+RE G NNPNKLRV GG ARGRK++SP VFLRPMMGKVKEAL+S+LT G+F+ + LDLF+GSGSVGIEALSRGA+ A FVD +K+CCEVAM+N GF G+ CA V D L +P R+ + +VTVTPPYEEVVYADL++AV DS V ED +VV+EYPVELG LPH +G+GRL+GLRN+RYGRTV+A YI PSG+L+ + +PEEF L+
Sbjct: 37 RQAQLPKNEDGVPMQQVKAPRPKRSSVASREKEELKKKLKXXXXXXXXXRIRAQGKKREGGFNNPNKLRVMGGIARGRKIESPDVFLRPMMGKVKEALFSSLTNMGLFDSGSAKALDLFSGSGSVGIEALSRGASYACFVDFAKECCEVAMKNVVNVGFEPQQGQAVCA---SVYDFLADPARYGADHRFDLVTVTPPYEEVVYADLVQAVADSPAVGEDCVVVLEYPVELGSLPHLLGDGRLIGLRNKRYGRTVIATYIKNPSGKLEY-NPKPEEFERLK 313
BLAST of mRNA_S-ischiensis_contig11.2094.1 vs. uniprot
Match: A0A7S2H4B1_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H4B1_9STRA) HSP 1 Score: 268 bits (684), Expect = 5.610e-81 Identity = 131/239 (54.81%), Postives = 182/239 (76.15%), Query Frame = 3
Query: 348 GPSRKRVRAQGKEREQGINNPNKLRVSGGSARGRKLDSPQVFLRPMMGKVKEALYSTLTGFGVFEDENCAFLDLFAGSGSVGIEALSRGAARATFVDLSKDCCEVAMRNAEKCGFGE--RACAVRGDVMDVLYNPLRHSLTE--PYSVVTVTPPYEEVVYADLIKAVTDSDLVREDTLVVVEYPVELGCLPHAIGE---GRLVGLRNRRYGRTVLAVYIYRPSGRLDLADSRPEEFVSL 1043
G S ++R QGK RE G+NNP+ LR+ G+ARGR+LDSP+V+LRPMMGKV+EA+YST T FG+++ ++ LD+F+GSGSVG+E+LSRGA+ +FVDLS+DCC+ RN + C F E +A GD + L +P + + P+ VVT+ PPYEE+VYADL++AV +S LV +DT++++EYPVELGC PH I G LVG+RNR+YGRTV+A+YI P+G +++A+SRPEEFVS+
Sbjct: 144 GSSNPKLRPQGKAREAGMNNPSNLRIMAGTARGRRLDSPEVYLRPMMGKVREAVYSTFTSFGLYDGDSTRHLDIFSGSGSVGLESLSRGASHCSFVDLSRDCCDAVERNLKWCNFEEEGKAAVYCGDAIRALSDPASMGIPDHLPFQVVTLCPPYEEIVYADLLEAVANSSLVTDDTIILIEYPVELGCFPHVIQRKDGGALVGVRNRKYGRTVVAMYIVNPTGNMEVAESRPEEFVSV 382
BLAST of mRNA_S-ischiensis_contig11.2094.1 vs. uniprot
Match: A0A7S1Z804_TRICV (Hypothetical protein n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z804_TRICV) HSP 1 Score: 264 bits (675), Expect = 6.250e-80 Identity = 136/250 (54.40%), Postives = 182/250 (72.80%), Query Frame = 3
Query: 366 VRAQGKEREQGINNPNKLRVSGGSARGRKLDSPQVFLRPMMGKVKEALYSTLTGFGVFE-DENCAFLDLFAGSGSVGIEALSRGAARATFVDLSKDCCEVAMRNAEKCGFG---------------ERACAVRGDVMDVLYNPLRHSLTEP----YSVVTVTPPYEEVVYADLIKAVTDSDLVREDTLVVVEYPVELGCLPHAIGE---GRLVGLRNRRYGRTVLAVYIYRPSGRLDLADSRPEEFVSLR 1046
+R QG+ER+ G+NNP+ LR+ GG+ARGRKLDSP+V+LRPMMGKV+EA++ST T FG+++ N LD+FAGSGSVG+E+LSRGA TFVD + DCC+ RN ++CGF ER VR D + L +P S+ P Y +VT+ PPYEEVVYADLI+AV +S LV +DT++++EYPVELGCLPH I G+++G+RNR+YGRTV+A+Y+ P+GR+++A SRPEEFVSLR
Sbjct: 113 LRPQGRERDVGLNNPSNLRILGGTARGRKLDSPEVYLRPMMGKVREAVFSTFTSFGLYDRGSNVRHLDIFAGSGSVGLESLSRGAGHVTFVDFADDCCDAVERNVKRCGFDVDEDDDDGTGRRAGTERTRVVRADYLRALRDP--ESVGIPPLTTYGIVTLCPPYEEVVYADLIEAVCNSRLVTDDTVIMIEYPVELGCLPHVITREDGGKVIGVRNRKYGRTVIAMYVVNPTGRMEVASSRPEEFVSLR 360
BLAST of mRNA_S-ischiensis_contig11.2094.1 vs. uniprot
Match: A0A7S3PYP8_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PYP8_9STRA) HSP 1 Score: 258 bits (659), Expect = 1.310e-77 Identity = 129/235 (54.89%), Postives = 178/235 (75.74%), Query Frame = 3
Query: 363 RVRAQGKEREQGINNPNKLRVSGGSARGRKLDSPQVFLRPMMGKVKEALYSTLTGFGVFEDENCAFLDLFAGSGSVGIEALSRGAARATFVDLSKDCCEVAMRNAEKCGFGERACA--VRGDVMDVLYNPLRHSLTE--PYSVVTVTPPYEEVVYADLIKAVTDSDLVREDTLVVVEYPVELGCLPHAIGE---GRLVGLRNRRYGRTVLAVYIYRPSGRLDL-ADSRPEEFVSL 1043
++RAQGK R G+NNP+ L++ GG+ARGRK+ SP+V+LRPMMGKVKEA+YST T FG+++ LD+F+GSGSVG+E+LSRGAA TFVDL++DCCE + RN + GF E + D + L +P + E Y++VT+ PPYEE+VYADL++AV +S +V +DT+++VEYP+ELGCLPH I G L+G+RNR+YGRT++A+Y+ P+GRLD A+SRPE+FVSL
Sbjct: 122 KLRAQGKSRADGMNNPSNLKILGGTARGRKIQSPEVYLRPMMGKVKEAVYSTFTSFGLYDGVATRHLDIFSGSGSVGLESLSRGAAHCTFVDLARDCCETSQRNIDIIGFDEPGMTRVICTDAITALRDPYSVGIPEGFTYNLVTLCPPYEEIVYADLLEAVANSPVVTDDTVILVEYPIELGCLPHVITRDDGGALIGVRNRKYGRTIIAMYVVNPTGRLDSSAESRPEDFVSL 356
BLAST of mRNA_S-ischiensis_contig11.2094.1 vs. uniprot
Match: B7GEJ1_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GEJ1_PHATC) HSP 1 Score: 244 bits (623), Expect = 3.370e-74 Identity = 120/215 (55.81%), Postives = 161/215 (74.88%), Query Frame = 3
Query: 417 LRVSGGSARGRKLDSPQVFLRPMMGKVKEALYSTLTGFGVFEDENCA-FLDLFAGSGSVGIEALSRGAARATFVDLSKDCCEVAMRNAEKCGFGERACAVRGDVMDVLYNPLRHSLTE--PYSVVTVTPPYEEVVYADLIKAVTDSDLVREDTLVVVEYPVELGCLPHAIGE---GRLVGLRNRRYGRTVLAVYIYRPSGRLDLADSRPEEFVSL 1043
LR++ G+A+GR+LDSP V+LRPMMGKV+EA+YST T FG+++ LD+FAGSGSVG+E+LSRGAA TFVDLS+DCC RN + C F + V G+ + VL P + E Y +VT+ PPYEE+VY DLI+AV +S +V +DT+V++EYPVELGCLPH + G +VG+RNRRYGRTV+A+Y+ P+GRL++A SRPEEF++L
Sbjct: 2 LRIAAGTAKGRRLDSPNVYLRPMMGKVREAVYSTFTAFGLYDPATTTRHLDIFAGSGSVGLESLSRGAAHCTFVDLSEDCCSAVERNVKWCDFAGKEQIVCGEAIQVLNEPFAAGIPELQTYQLVTLCPPYEEIVYGDLIEAVANSPVVTDDTVVLIEYPVELGCLPHVVRRRDGGAMVGVRNRRYGRTVIAIYVVNPTGRLEVAYSRPEEFITL 216
BLAST of mRNA_S-ischiensis_contig11.2094.1 vs. uniprot
Match: A0A7S1BT59_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BT59_9STRA) HSP 1 Score: 241 bits (615), Expect = 7.000e-73 Identity = 127/215 (59.07%), Postives = 156/215 (72.56%), Query Frame = 3
Query: 414 KLRVSGGSARGRKLDSPQVFLRPMMGKVKEALYSTLTGFGVFEDE----NCAFLDLFAGSGSVGIEALSRGAARATFVDLSKDCCEVAMRNAEKCGFGERACAVRGDVMDVLYNPLRHSLT---EPYSVVTVTPPYEEVVYADLIKAVTDSDLVREDTLVVVEYPVELGCLPHAIGEGRLVGLRNRRYGRTVLAVYIYRPSGRLDLADSRPEEFV 1037
+LR+ GGS RGR L SP V LRPMMGKVKEAL+STLT FG+++ LD+FAGSGSVG+E+LSRGAA TFVD ++DCC+ A N E CGFGE AV GD L +P + PY ++T+TPPYEE+ Y +LI AV S L EDT+VVVEYPVELG LPH +G GRLVG+RNR+YGRTVL +Y+ PSGR+++A SRPEEF+
Sbjct: 12 RLRILGGSRRGRILLSPSVHLRPMMGKVKEALFSTLTSFGLYDASAGGPGPRHLDVFAGSGSVGLESLSRGAAWGTFVDAAEDCCDTARNNLEMCGFGEAGDAVCGDAFRALRDPASVGIDLSKGPYEIITLTPPYEEISYDELIDAVVSSPLCGEDTVVVVEYPVELGSLPHVLG-GRLVGVRNRKYGRTVLGIYVCNPSGRMEVAGSRPEEFL 225
BLAST of mRNA_S-ischiensis_contig11.2094.1 vs. uniprot
Match: B8BT17_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BT17_THAPS) HSP 1 Score: 240 bits (612), Expect = 3.190e-72 Identity = 125/230 (54.35%), Postives = 162/230 (70.43%), Query Frame = 3
Query: 402 NNPNKLRVSGGSARGRKLDSPQVFLRPMMGKVKEALYSTLTGFGVFEDEN---------CA--FLDLFAGSGSVGIEALSRGAARATFVDLSKDCCEVAMRNAEKCGFGERACAVRGDVMDVLYNPLRHSLTEP--YSVVTVTPPYEEVVYADLIKAVTDSDLVREDTLVVVEYPVELGCLPHAIGE---GRLVGLRNRRYGRTVLAVYIYRPSGRLDLADSRPEEFVSL 1043
NNP+ LR+ GGS RGRKL+SP V+LRPMMGKVKEA+YST T FG++E+ C+ LD+F+GSGSVG+E+LSRGA TFVD+S DCC RN +CG A V D L P + Y +VT+ PPYEE+VYADL+ AV +S+LV EDT++++EYPVELGCLPHAIG G L+G+RNR+YGRTV+A+YI P+G + A+SRPEEF+++
Sbjct: 11 NNPSNLRILGGSVRGRKLESPTVYLRPMMGKVKEAVYSTFTSFGLYENNQNIGGGGTGTCSTRHLDIFSGSGSVGLESLSRGARHCTFVDMSNDCCGACERNIVRCGGEPIAKVVCTDAFRALRQPETVGIDPSCKYDLVTLCPPYEEIVYADLLDAVANSELVTEDTVILIEYPVELGCLPHAIGREDGGVLIGIRNRKYGRTVIAMYIVNPTGARETAESRPEEFITI 240
BLAST of mRNA_S-ischiensis_contig11.2094.1 vs. uniprot
Match: K0SD16_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SD16_THAOC) HSP 1 Score: 240 bits (612), Expect = 3.630e-71 Identity = 134/253 (52.96%), Postives = 172/253 (67.98%), Query Frame = 3
Query: 366 VRAQGKERE-QGINNPNKLRVSGGSARGRKLDSPQVFLRPMMGKVKEALYSTLTGFGVFED---ENCA--FLDLFAGSGSVGIEALSRGAARATFVDLSKDCCEVAMRNAEKCGF------------GERACAVRGDVMDVLYNPLRHSLT---EP---YSVVTVTPPYEEVVYADLIKAVTDSDLVREDTLVVVEYPVELGCLPHAIGE---GRLVGLRNRRYGRTVLAVYIYRPSGRLDLADSRPEEFVSL 1043
+R QG R+ Q NNP+ LRV GGS RGRKL+SP V+LRPMMGKVKEA+YST T FG ++ + C LD+F+GSGSVG+E+LSRGA TFVD+S DCC RN E+CGF G+ V V Y LR T +P Y +VT+ PPYEE+VYA+L+ AV +S LV+EDT+++VEYPVELGCLPH IG G L+G+RNR+YGRTV+A+YI P+G + A+SRPEEF+++
Sbjct: 65 LRPQGLSRDTQRYNNPSNLRVLGGSVRGRKLESPTVYLRPMMGKVKEAVYSTFTSFGFYDGVGGQPCTTRHLDIFSGSGSVGLESLSRGAKHCTFVDMSSDCCGACERNIERCGFDGWNEGGIGTEVGDSGEPVANVVCTDAYRALREPETVGIDPEAKYDLVTLCPPYEEIVYAELLDAVANSKLVKEDTVILVEYPVELGCLPHVIGREDGGVLIGVRNRKYGRTVIAMYIVNPTGDRESAESRPEEFITI 317 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig11.2094.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig11.2094.1 >prot_S-ischiensis_contig11.2094.1 ID=prot_S-ischiensis_contig11.2094.1|Name=mRNA_S-ischiensis_contig11.2094.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=341bp MAGRCNVAAPLRSSSAVIFAALVAQACVVGVDALVTAPTAASWASPQAVGback to top mRNA from alignment at S-ischiensis_contig11:1135541..1142942+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig11.2094.1 ID=mRNA_S-ischiensis_contig11.2094.1|Name=mRNA_S-ischiensis_contig11.2094.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=7402bp|location=Sequence derived from alignment at S-ischiensis_contig11:1135541..1142942+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig11:1135541..1142942+ >mRNA_S-ischiensis_contig11.2094.1 ID=mRNA_S-ischiensis_contig11.2094.1|Name=mRNA_S-ischiensis_contig11.2094.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2046bp|location=Sequence derived from alignment at S-ischiensis_contig11:1135541..1142942+ (Schizocladia ischiensis KU_0333)back to top |