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Homology
BLAST of mRNA_S-ischiensis_contig11.2017.1 vs. uniprot
Match: A0A836C920_9STRA (Gamma-tocopherol methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C920_9STRA) HSP 1 Score: 439 bits (1129), Expect = 3.790e-144 Identity = 211/315 (66.98%), Postives = 249/315 (79.05%), Query Frame = 2
Query: 173 LSMGPLTAARKAA----FLWKPKERSDEELKKGIAGFYDASSALWEDMWGEHMHHGYYEEGKRPGTIAEHRAAQVSMVDRSLDWAGLA-DQPVAPATGVDVGCGIGGSSRHISRRFGTSMKGITLSPFQRERAEDISKKAGLEDKCQFQVADALDMPFGDGEFDLVWSMESGEHMPKKRDFVRELGRVCAPGGRIIIVTWCHRDLAPGEEGLAPSEERLLASINRAYYLPRWCSVADYVGYCEEGGLEDIRRADWTDNIQYFWPAVIRSSLTTRGILGLLKSGPVTIRGAIAMLLMVRGFNKGLVKFGLITATKP 1102
+ MG TA A L + +ERS ELK GIA FYD SS LWE +WGEHMHHGYYEE +P ++ EH+AAQV+M+D+SL+WAG+ D P TGVDVGCGIGGSSRHI+R++GT M+GITLSP Q RA +++ +AGL DKC FQVADAL+ PF D FDL+WSMESGEHMP K+ FV EL RVCAPGGR++IVTWCHRDL GEE L P E+RLLA+IN+AYYLP+WCSVADYV YC+E GL D+RR DWTD IQYFWPAVI+SSL+ RGI GL+++GP IRGA+AMLLMVRGF LVKFGLITA KP
Sbjct: 1 MQMGARTAVSSAVTKVQLLGRNRERSRAELKDGIANFYDKSSGLWESIWGEHMHHGYYEE--QPQSLEEHKAAQVAMIDKSLEWAGVGVDAASTPKTGVDVGCGIGGSSRHIARKWGTKMQGITLSPKQCARANELAAEAGLADKCSFQVADALEQPFEDNSFDLIWSMESGEHMPLKQQFVGELARVCAPGGRVLIVTWCHRDLEEGEESLKPKEQRLLAAINKAYYLPKWCSVADYVTYCQEAGLTDVRRDDWTDKIQYFWPAVIKSSLSGRGIRGLVRAGPGIIRGALAMLLMVRGFKLNLVKFGLITARKP 313
BLAST of mRNA_S-ischiensis_contig11.2017.1 vs. uniprot
Match: A0A6H5LQU7_9PHAE (Methyltransf_11 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LQU7_9PHAE) HSP 1 Score: 437 bits (1124), Expect = 1.780e-142 Identity = 218/347 (62.82%), Postives = 260/347 (74.93%), Query Frame = 2
Query: 80 HAFLPHAAWSAVRSPGSNKREHG--SSARRGGALSMGPLTAA----RKAAFLWKPKERSDEELKKGIAGFYDASSALWEDMWGEHMHHGYYEEGKRPGTIAEHRAAQVSMVDRSLDWAGLADQPVAPATGVDVGCGIGGSSRHISRRFGTSMKGITLSPFQRERAEDISKKAGLEDKCQFQVADALDMPFGDGEFDLVWSMESGEHMPKKRDFVRELGRVCAPGGRIIIVTWCHRDLAPGEEGLAPSEERLLASINRAYYLPRWCSVADYVGYCEEGGLEDIRRADWTDNIQYFWPAVIRSSLTTRGILGLLKSGPVTIRGAIAMLLMVRGFNKGLVKFGLITATKP 1102
H + A+ A S R S AR G SMG +AA ++A K K RSD ELK+GIA FYD SS +WE+MWGEHMHHGYY +G +P + HRAAQ M+ RSL+WAG+ + AP TGVD+GCG+GGSSR ISRR+GT+M GI+LSP Q ERA+++S+ AGL DKC+FQVADAL+ PF FDLVWSMESGEHMP K FV EL R+CAPGGR+++VTWCHRDL GE L P EE+LLA IN+AYYLPRWCS +DYV Y E+ GL DI+RADWTDNIQ FWPAVIRSS++ +GI+GLLKSGPVTIRGA+AMLLMVRG+ +GLVKF LIT KP
Sbjct: 49 HGHVHDCAYGAAGSARGKGRRRAAPSRARAQGDASMGLRSAAENTWKRARGGGKGKTRSDGELKEGIANFYDKSSGIWEEMWGEHMHHGYYVQGVKPKNMEHHRAAQRFMIGRSLEWAGVEEGGAAPKTGVDIGCGVGGSSRAISRRYGTNMTGISLSPVQVERAKNLSEAAGLGDKCKFQVADALNTPFDTDSFDLVWSMESGEHMPYKPKFVGELARICAPGGRVLVVTWCHRDLEEGETELTPKEEKLLAKINKAYYLPRWCSTSDYVKYFEDEGLVDIKRADWTDNIQNFWPAVIRSSVSFQGIVGLLKSGPVTIRGAVAMLLMVRGYKRGLVKFALITGKKP 395
BLAST of mRNA_S-ischiensis_contig11.2017.1 vs. uniprot
Match: A0A6S9IJ58_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9IJ58_HETAK) HSP 1 Score: 410 bits (1054), Expect = 1.300e-132 Identity = 192/292 (65.75%), Postives = 232/292 (79.45%), Query Frame = 2
Query: 230 ERSDEELKKGIAGFYDASSALWEDMWGEHMHHGYYEEGKRPGTIAEHRAAQVSMVDRSLDWAGLADQPVAPATGVDVGCGIGGSSRHISRRFGTSMKGITLSPFQRERAEDISKKAGLEDKCQFQVADALDMPFGDGEFDLVWSMESGEHMPKKRDFVRELGRVCAPGGRIIIVTWCHRDLAPGEEGLAPSEERLLASINRAYYLPRWCSVADYVGYCEEGGLEDIRRADWTDNIQYFWPAVIRSSL-TTRGILGLLKSGPVTIRGAIAMLLMVRGFNKGLVKFGLITATKP 1102
ER+D+ELK GIAGFYDASS +WED+WGEHMHHGYY EG + +H+ AQ+ M++RSLDWAG+ V VDVGCGIGGSSRHI+RR+G GITLSP Q RA +S+ GL D+C+FQVADAL+MPF + FDL+WSMESGEHMP+K FV+ L RVCAPGG++++VTWCHRDL PGE GL P EERLL IN+AYYLPRWCSVADYV Y E GL DI+ ADWTD IQ FWPAV+RS+L + R G+L+SGP T+RGA+AML M++G+N+GL+KFGLITATKP
Sbjct: 59 ERTDKELKDGIAGFYDASSGVWEDVWGEHMHHGYYPEGVK----VDHKEAQIDMINRSLDWAGV----VKADNVVDVGCGIGGSSRHIARRYGGRTTGITLSPVQAARATALSEAQGLGDRCRFQVADALNMPFEENSFDLIWSMESGEHMPEKEKFVQGLARVCAPGGKVLVVTWCHRDLEPGEAGLTPKEERLLNRINKAYYLPRWCSVADYVAYAEAAGLADIKTADWTDRIQAFWPAVVRSALGSPRNFWGMLRSGPKTVRGALAMLWMIQGYNRGLIKFGLITATKP 342
BLAST of mRNA_S-ischiensis_contig11.2017.1 vs. uniprot
Match: A0A7S4J028_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J028_9STRA) HSP 1 Score: 388 bits (997), Expect = 3.740e-124 Identity = 192/312 (61.54%), Postives = 230/312 (73.72%), Query Frame = 2
Query: 173 LSMGPLTAARKAAFLWKPKERSDEELKKGIAGFYDASSALWEDMWGEHMHHGYYEEGKRPGTIAEHRAAQVSMVDRSLDWAGLADQ--PVAPATGVDVGCGIGGSSRHISRRFGTSMKGITLSPFQRERAEDISKKAGLEDKCQFQVADALDMPFGDGEFDLVWSMESGEHMPKKRDFVRELGRVCAPGGRIIIVTWCHRDLAPGEEGLAPSEERLLASINRAYYLPRWCSVADYVGYCEEGGLEDIRRADWTDNIQYFWPAVIRSSLTTRGILGLLKSGPVTIRGAIAMLLMVRGFNKGLVKFGLITATKP 1102
L MG +AAR+ KER+ E+LK GIAGFYD SS LWED+WGEHMHHGYY P +H AQ+ M+D SL WAG+ ++ P P+ VDVGCGIGGSSRHI+R++G S KGITLSP+Q +R +++ + GL D+C+F+VADALDMPF D EFDLVWS ESGEHMP K FV EL RV APGGRII+VTWCHRDL GEE L EE+LLA INRAYYLPRWCSV DYV EE G I+R DW+ I FW AVI+SSL+ + ++GL+KSG TIRGA AM LM++GFN GL+KFG+IT KP
Sbjct: 47 LQMGVGSAARRVRDSVLSKERNREDLKIGIAGFYDRSSKLWEDIWGEHMHHGYYV----PEDRTDHIQAQIDMIDESLKWAGVPNEGEPGTPSKVVDVGCGIGGSSRHIARKYGASTKGITLSPYQAQRGNELASEQGLADQCEFRVADALDMPFHDEEFDLVWSFESGEHMPDKTKFVDELCRVVAPGGRIILVTWCHRDLEEGEESLTKKEEKLLAKINRAYYLPRWCSVDDYVKLLEERGAVGIKRDDWSYTIAPFWKAVIKSSLSLKSVVGLMKSGFSTIRGAYAMFLMLKGFNMGLIKFGMITCQKP 354
BLAST of mRNA_S-ischiensis_contig11.2017.1 vs. uniprot
Match: K0T305_THAOC (Methyltransf_11 domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T305_THAOC) HSP 1 Score: 380 bits (975), Expect = 8.130e-121 Identity = 188/307 (61.24%), Postives = 227/307 (73.94%), Query Frame = 2
Query: 182 GPLTAARKAAFLWKPKERSDEELKKGIAGFYDASSALWEDMWGEHMHHGYYEEGKRPGTIAEHRAAQVSMVDRSLDWAGLADQPVAPATGVDVGCGIGGSSRHISRRF-GTSMKGITLSPFQRERAEDISKKAGLEDKCQFQVADALDMPFGDGEFDLVWSMESGEHMPKKRDFVRELGRVCAPGGRIIIVTWCHRDLAPGEEGLAPSEERLLASINRAYYLPRWCSVADYVGYCEEGGLEDIRRADWTDNIQYFWPAVIRSSLTTRGILGLLKSGPVTIRGAIAMLLMVRGFNKGLVKFGLITATK 1099
G TAAR+ A ++RS+ +LK GIA FYD SS LWED+WGEHMHHGYY P +H+ AQV ++D L W+G AD P VDVGCGIGGSSRHI+ ++ G + +GITLSP+Q +R +++ + GL D+ FQVADALDMPFGDGEFDL WS+ESGEHMP K+ FV EL RV PGGR+IIVTWCHRDL GE L+ EER+LA INRAYYLPRWCSV DYV E G E+IRR DW+ I FW AVI+SSL + + GL++SGP TIRGA AMLLM+RGF+KG++KFGLITATK
Sbjct: 39 GIRTAARRVADSVLARDRSESDLKSGIAFFYDRSSRLWEDVWGEHMHHGYYV----PADRTDHQQAQVDLIDEVLKWSG-ADDGEPPRKVVDVGCGIGGSSRHIASKYDGCTARGITLSPYQAQRGNELAAERGLADRASFQVADALDMPFGDGEFDLAWSLESGEHMPDKKKFVGELMRVVRPGGRVIIVTWCHRDLEKGEPSLSRKEERILAKINRAYYLPRWCSVDDYVKILEGEGAENIRREDWSHIIAPFWKAVIKSSLNLKSVAGLIRSGPATIRGAYAMLLMLRGFDKGVIKFGLITATK 340
BLAST of mRNA_S-ischiensis_contig11.2017.1 vs. uniprot
Match: A0A7S4BL88_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BL88_CHRCT) HSP 1 Score: 375 bits (962), Expect = 1.440e-118 Identity = 181/290 (62.41%), Postives = 213/290 (73.45%), Query Frame = 2
Query: 233 RSDEELKKGIAGFYDASSALWEDMWGEHMHHGYYEEGKRPGTIAEHRAAQVSMVDRSLDWAGLADQPVAPATGVDVGCGIGGSSRHISRRFGTSMKGITLSPFQRERAEDISKKAGLEDKCQFQVADALDMPFGDGEFDLVWSMESGEHMPKKRDFVRELGRVCAPGGRIIIVTWCHRDLAPGEEGLAPSEERLLASINRAYYLPRWCSVADYVGYCEEGGLEDIRRADWTDNIQYFWPAVIRSSLTTRGILGLLKSGPVTIRGAIAMLLMVRGFNKGLVKFGLITATKP 1102
RS EEL+KGIA FYD+SS +WE +WGEHMHHGYY + ++ H+ AQV M++ +L WAG D P P + +DVGCGIGGSSR I+R++G + GITLSP Q RA+ +S AGL D QFQVADALDMPF D FDL+WSMESGEHMP KR F+ EL RVC PGGRII+V WCHRDL PGE L P EERLL INRAYYLPRWCSVADY + GLE IR DWTD ++ FWPAVI S+ +LGL +SG TIRGA+ M LM+RG +GLVKFGL+TA KP
Sbjct: 71 RSPEELRKGIAKFYDSSSGIWERVWGEHMHHGYYNDNEKKN----HQEAQVDMINEALKWAGADDNP--PKSVLDVGCGIGGSSRVIARKYGNTGAGITLSPVQAGRAQALSDAAGLGDALQFQVADALDMPFEDNSFDLIWSMESGEHMPDKRQFISELSRVCKPGGRIIVVAWCHRDLLPGETQLLPREERLLRRINRAYYLPRWCSVADYAKLASDFGLEQIRTDDWTDRVKRFWPAVILSAFRPNSLLGLFRSGFTTIRGALVMPLMIRGQRRGLVKFGLMTAVKP 354
BLAST of mRNA_S-ischiensis_contig11.2017.1 vs. uniprot
Match: A0A7S0L5W0_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L5W0_9EUKA) HSP 1 Score: 373 bits (957), Expect = 8.170e-118 Identity = 176/289 (60.90%), Postives = 218/289 (75.43%), Query Frame = 2
Query: 233 RSDEELKKGIAGFYDASSALWEDMWGEHMHHGYYEEGKRPGTIAEHRAAQVSMVDRSLDWAGLADQPVAPATGVDVGCGIGGSSRHISRRFGTSMKGITLSPFQRERAEDISKKAGLEDKCQFQVADALDMPFGDGEFDLVWSMESGEHMPKKRDFVRELGRVCAPGGRIIIVTWCHRDLAPGEEGLAPSEERLLASINRAYYLPRWCSVADYVGYCEEGGLEDIRRADWTDNIQYFWPAVIRSSLTTRGILGLLKSGPVTIRGAIAMLLMVRGFNKGLVKFGLITATK 1099
R+ EEL+ GIAGFYD+SS +WE +WGEHMHHG+Y++ ++ +H AQV M+D+ L+W+G D P P + +DVGCGIGGSSRHI+R++G+S GITLSP Q RA+ +S GL + FQVADAL MPF D FDL+WSMESGEHMP K+ FV EL RVC PGGR+I+V WCHRDL PGE+ LA EERLL +INRAY+LPRWCSVADY+ Y E GL +I+R DWTD ++ FWPAVI S+L R +GLL+SG TIRGA+ M LM+RG +GLVKFGL T K
Sbjct: 53 RTVEELRAGIAGFYDSSSGVWEKVWGEHMHHGFYDDSRK-----DHVQAQVDMIDKVLEWSGADDAP--PTSVLDVGCGIGGSSRHIARKYGSSGIGITLSPVQAARAQQLSNDQGLGEALSFQVADALRMPFADNSFDLIWSMESGEHMPDKQQFVSELARVCKPGGRVIVVAWCHRDLEPGEQALAMREERLLRTINRAYFLPRWCSVADYMRYASEQGLSEIKRDDWTDKVKRFWPAVILSALRPRAFVGLLRSGTKTIRGALVMPLMIRGQRRGLVKFGLWTGRK 334
BLAST of mRNA_S-ischiensis_contig11.2017.1 vs. uniprot
Match: B8C7V7_THAPS (Methyltransf_11 domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C7V7_THAPS) HSP 1 Score: 371 bits (952), Expect = 3.430e-117 Identity = 182/296 (61.49%), Postives = 219/296 (73.99%), Query Frame = 2
Query: 227 KERSDEELKKGIAGFYDASSALWEDMWGEHMHHGYYEEGKRPGTIAEHRAAQVSMVDRSLDWAGLADQPVAPATGVDVGCGIGGSSRHISRRF-GTSMKGITLSPFQRERAEDISKKAGLEDKCQFQVADALDMPFGDGEFDLVWSMESGEHMPKKRDFVRELGRVCAPGGRIIIVTWCHRDLAPGEEGLAPSEERLLASINRAYYLPRWCSVADYVGYCEEGGLEDIRRADWTDNIQYFWPAVIRSSLTTRGILGLLKSGPVTIRGAIAMLLMVRGFNKGLVKFGLITATKPLRE 1111
+ER+D +LK GIA FYD SS LWED+WGEHMHHGYY P +H AQ+ ++D L WAG+ D V P VDVGCGIGGSSRHI +++ G++ KGITLSP+Q R +++K+ GLE + FQVADAL+MPF D FDLVWS+ESGEHMP K FV EL RV APGGRII+VTWCHRDL PGE L+ EE++LA INRAYYLP+WCSV+DYV E G DI+R DW+ I FW AVI+SSL + ++GLLKSG TIRGA AMLLM+RGFN G++KFGLIT TK E
Sbjct: 80 RERTDADLKSGIAFFYDRSSKLWEDVWGEHMHHGYYV----PEDRTDHVQAQIDLIDEVLKWAGV-DDAVPPKRVVDVGCGIGGSSRHIVKKYEGSTAKGITLSPYQAGRGNELAKEQGLEGRASFQVADALNMPFDDNSFDLVWSLESGEHMPDKSKFVHELMRVAAPGGRIILVTWCHRDLEPGETSLSKKEEKILAKINRAYYLPKWCSVSDYVKLLENEGAVDIKREDWSYIIAPFWKAVIKSSLNLKSVMGLLKSGFSTIRGAYAMLLMLRGFNSGVIKFGLITCTKKKVE 370
BLAST of mRNA_S-ischiensis_contig11.2017.1 vs. uniprot
Match: A0A7S1B3A8_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B3A8_9STRA) HSP 1 Score: 369 bits (948), Expect = 1.060e-116 Identity = 184/298 (61.74%), Postives = 221/298 (74.16%), Query Frame = 2
Query: 221 KPKERSDEELKKGIAGFYDASSALWEDMWGEHMHHGYYEEGKRPGTIAEHRAAQVSMVDRSLDWAGLADQPVAPATGVDVGCGIGGSSRHISRRFGTSM-KGITLSPFQRERAEDISKKAGLEDKCQFQVADALDMPFGDGEFDLVWSMESGEHMPKKRDFVRELGRVCAPGGRIIIVTWCHRDLAPGEEGLAPSEERLLASINRAYYLPRWCSVADYVGYCEEGGLEDIRRADWTDNIQYFWPAVIRSSLTTRGILGLLKSGPVTIRGAIAMLLMVRGFNKGLVKFGLITATKPLRE 1111
+ KERS EELK GIAGFYD SS LWE++WGEHMHHGYY P +H AQ+ ++D L W+G+ D P P++ VDVGCG+GGSSRHI+R++G +GITLSP+Q R +++ + GL D C ++VADAL+MPF D FDLVWS+ESGEHMP+K FV EL RV APGGRIIIVTWCHRDL GE+ L E++LLA INRAYYLP WCSVADYV EE G +DIRR DW+ I FW AVI+SSL + ++GL KSG T RGA AM LM+RGFNKGL+KFGLIT TKP E
Sbjct: 72 RSKERSREELKVGIAGFYDRSSKLWEEVWGEHMHHGYYV----PENRTDHVQAQIDLIDEVLAWSGI-DSP--PSSVVDVGCGVGGSSRHIARKYGCERAEGITLSPYQAARGNELAVETGLADACTYRVADALEMPFDDDAFDLVWSLESGEHMPEKTKFVGELLRVAAPGGRIIIVTWCHRDLEEGEKDLTKKEKKLLAKINRAYYLPPWCSVADYVTMLEERGAKDIRRDDWSHIIAPFWKAVIKSSLNFKSVVGLAKSGFSTQRGAYAMFLMLRGFNKGLIKFGLITCTKPELE 362
BLAST of mRNA_S-ischiensis_contig11.2017.1 vs. uniprot
Match: A0A7S2R2U7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R2U7_9STRA) HSP 1 Score: 367 bits (941), Expect = 2.030e-116 Identity = 181/300 (60.33%), Postives = 219/300 (73.00%), Query Frame = 2
Query: 227 KERSDEELKKGIAGFYDASSALWEDMWGEHMHHGYYEEGKRPGTIAEHRAAQVSMVDRSLDWAGLADQPV------APATGVDVGCGIGGSSRHISRRFGTSMKGITLSPFQRERAEDISKKAGLEDKCQFQVADALDMPFGDGEFDLVWSMESGEHMPKKRDFVRELGRVCAPGGRIIIVTWCHRDLAPGEEGLAPSEERLLASINRAYYLPRWCSVADYVGYCE-EGGLEDIRRADWTDNIQYFWPAVIRSSLTTRGILGLLKSGPVTIRGAIAMLLMVRGFNKGLVKFGLITATKPL 1105
KERS E+LK GIAGFYD SS LWED+WGEHMHHGYY P T +H+ AQ+ M+D+ L+W+ +AD P + VDVGCGIGGSSRHI+R++G + +G+TLSP+Q RA +++K+ GL+D CQFQVADALDMPF + FDLVWS+ESGEHMP K F+ EL RV PGGRIIIVTWCHRD GE L E +LLA INRAYYLP WCSVADYV + + DI+R DW+ I FW AVI+SSL + I GLLKSG T RGA AM LM++GF+ GL+KFGLIT TKP+
Sbjct: 12 KERSREDLKIGIAGFYDRSSKLWEDVWGEHMHHGYYV----PETRTDHQQAQIDMIDKVLEWSHVADDEDDATNNNKPKSMVDVGCGIGGSSRHIARKYGCTTQGLTLSPYQANRANELAKEQGLQDSCQFQVADALDMPFENDSFDLVWSLESGEHMPDKEQFISELFRVACPGGRIIIVTWCHRDFNEGETSLTKKETKLLAKINRAYYLPPWCSVADYVNVLKHQHNAVDIQREDWSYIIAPFWKAVIQSSLNLKSIWGLLKSGFQTQRGAYAMFLMLKGFHNGLIKFGLITCTKPI 307
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 438.3 |
| Seed ortholog evalue | 3.4e-120 |
| Seed eggNOG ortholog | 2880.D8LHY0 |
| Preferred name | TMT |
| KEGG rclass | RC00003,RC01662 |
| KEGG ko | ko:K05928 |
| KEGG Reaction | R07236,R07504,R10491,R10492 |
| KEGG Pathway | ko00130,ko01100,ko01110,map00130,map01100,map01110 |
| KEGG Module | M00112 |
| GOs | GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006766,GO:0006775,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0009058,GO:0009110,GO:0009507,GO:0009536,GO:0009987,GO:0010189,GO:0016740,GO:0016741,GO:0018130,GO:0032259,GO:0042360,GO:0042362,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050342,GO:0071704,GO:1901360,GO:1901362,GO:1901576,GO:1901615,GO:1901617 |
| EggNOG free text desc. | sterol 24-C-methyltransferase activity |
| EggNOG OGs | COG0500@1,KOG1269@2759 |
| EC | 2.1.1.95 |
| COG Functional cat. | Q |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko00002,ko01000 |
| Hectar predicted targeting category | chloroplast |
| Ec32 ortholog description | Gamma-tocopherol methyltransferase |
| Ec32 ortholog | Ec-18_000910.1 |
| Exons | 10 |
| Model size | 2694 |
| Cds size | 1083 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815589.6484745-UTR-S-ischiensis_contig11:474981..476561 | 1622815589.6484745-UTR-S-ischiensis_contig11:474981..476561 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig11 474982..476561 - |
| 1695739788.537863-UTR-S-ischiensis_contig11:474981..476561 | 1695739788.537863-UTR-S-ischiensis_contig11:474981..476561 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig11 474982..476561 - |
| 1622815589.7831767-UTR-S-ischiensis_contig11:484647..484678 | 1622815589.7831767-UTR-S-ischiensis_contig11:484647..484678 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig11 484648..484678 - |
| 1695739788.6585135-UTR-S-ischiensis_contig11:484647..484678 | 1695739788.6585135-UTR-S-ischiensis_contig11:484647..484678 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig11 484648..484678 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815589.661546-CDS-S-ischiensis_contig11:476561..476636 | 1622815589.661546-CDS-S-ischiensis_contig11:476561..476636 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig11 476562..476636 - |
| 1695739788.559264-CDS-S-ischiensis_contig11:476561..476636 | 1695739788.559264-CDS-S-ischiensis_contig11:476561..476636 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig11 476562..476636 - |
| 1622815589.6802201-CDS-S-ischiensis_contig11:477688..477790 | 1622815589.6802201-CDS-S-ischiensis_contig11:477688..477790 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig11 477689..477790 - |
| 1695739788.5690644-CDS-S-ischiensis_contig11:477688..477790 | 1695739788.5690644-CDS-S-ischiensis_contig11:477688..477790 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig11 477689..477790 - |
| 1622815589.692989-CDS-S-ischiensis_contig11:478746..478861 | 1622815589.692989-CDS-S-ischiensis_contig11:478746..478861 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig11 478747..478861 - |
| 1695739788.5803561-CDS-S-ischiensis_contig11:478746..478861 | 1695739788.5803561-CDS-S-ischiensis_contig11:478746..478861 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig11 478747..478861 - |
| 1622815589.7038155-CDS-S-ischiensis_contig11:479638..479764 | 1622815589.7038155-CDS-S-ischiensis_contig11:479638..479764 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig11 479639..479764 - |
| 1695739788.593252-CDS-S-ischiensis_contig11:479638..479764 | 1695739788.593252-CDS-S-ischiensis_contig11:479638..479764 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig11 479639..479764 - |
| 1622815589.7152638-CDS-S-ischiensis_contig11:480540..480632 | 1622815589.7152638-CDS-S-ischiensis_contig11:480540..480632 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig11 480541..480632 - |
| 1695739788.6049123-CDS-S-ischiensis_contig11:480540..480632 | 1695739788.6049123-CDS-S-ischiensis_contig11:480540..480632 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig11 480541..480632 - |
| 1622815589.7248037-CDS-S-ischiensis_contig11:482207..482267 | 1622815589.7248037-CDS-S-ischiensis_contig11:482207..482267 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig11 482208..482267 - |
| 1695739788.61341-CDS-S-ischiensis_contig11:482207..482267 | 1695739788.61341-CDS-S-ischiensis_contig11:482207..482267 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig11 482208..482267 - |
| 1622815589.7344844-CDS-S-ischiensis_contig11:482984..483156 | 1622815589.7344844-CDS-S-ischiensis_contig11:482984..483156 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig11 482985..483156 - |
| 1695739788.6214232-CDS-S-ischiensis_contig11:482984..483156 | 1695739788.6214232-CDS-S-ischiensis_contig11:482984..483156 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig11 482985..483156 - |
| 1622815589.745444-CDS-S-ischiensis_contig11:483558..483693 | 1622815589.745444-CDS-S-ischiensis_contig11:483558..483693 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig11 483559..483693 - |
| 1695739788.6296778-CDS-S-ischiensis_contig11:483558..483693 | 1695739788.6296778-CDS-S-ischiensis_contig11:483558..483693 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig11 483559..483693 - |
| 1622815589.7587636-CDS-S-ischiensis_contig11:484336..484437 | 1622815589.7587636-CDS-S-ischiensis_contig11:484336..484437 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig11 484337..484437 - |
| 1695739788.6385005-CDS-S-ischiensis_contig11:484336..484437 | 1695739788.6385005-CDS-S-ischiensis_contig11:484336..484437 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig11 484337..484437 - |
| 1622815589.7707415-CDS-S-ischiensis_contig11:484542..484647 | 1622815589.7707415-CDS-S-ischiensis_contig11:484542..484647 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig11 484543..484647 - |
| 1695739788.6481051-CDS-S-ischiensis_contig11:484542..484647 | 1695739788.6481051-CDS-S-ischiensis_contig11:484542..484647 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig11 484543..484647 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig11.2017.1 >prot_S-ischiensis_contig11.2017.1 ID=prot_S-ischiensis_contig11.2017.1|Name=mRNA_S-ischiensis_contig11.2017.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=361bp
MRCPLFVLLGALLVTTHAFLPHAAWSAVRSPGSNKREHGSSARRGGALSM
GPLTAARKAAFLWKPKERSDEELKKGIAGFYDASSALWEDMWGEHMHHGY
YEEGKRPGTIAEHRAAQVSMVDRSLDWAGLADQPVAPATGVDVGCGIGGS
SRHISRRFGTSMKGITLSPFQRERAEDISKKAGLEDKCQFQVADALDMPF
GDGEFDLVWSMESGEHMPKKRDFVRELGRVCAPGGRIIIVTWCHRDLAPG
EEGLAPSEERLLASINRAYYLPRWCSVADYVGYCEEGGLEDIRRADWTDN
IQYFWPAVIRSSLTTRGILGLLKSGPVTIRGAIAMLLMVRGFNKGLVKFG
LITATKPLRE* back to topmRNA from alignment at S-ischiensis_contig11:474982..484678- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig11.2017.1 ID=mRNA_S-ischiensis_contig11.2017.1|Name=mRNA_S-ischiensis_contig11.2017.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=9697bp|location=Sequence derived from alignment at S-ischiensis_contig11:474982..484678- (Schizocladia ischiensis KU_0333)
CAAGTGCTCTGCGACACGGGGCCCAAGCGCGATGCGTTGCCCACTTTTTG
TTCTGTTGGGTGCTCTGTTGGTCACCACGCATGCGTTTTTGCCCCACGCT
GCGTGGTCCGCCGTCCGTTCTCCTGGAAGCAACAAGGTGGGAGGAGAGAG
CAGCGCTGGCTCGCCCCAAGGCCTTGCCGCGTACCCGATGTAGTAAATGT
GCTTAACGTGGCGCGCTTTCCGTTTCTGACTGCATGAACAGAGGGAGCAT
GGTTCGTCGGCGCGGCGAGGTGGGGCTTTGAGCATGGGCCCCCTCACGGC
CGCTCGAAAGGCGGCGTTCTTGTGGAAGCCCAAGGAGCGTAGGTGCGCCC
TCAGAATGGTCGCTCTTGTCACTAAATGGCTGTCAGGCATGGTGCAGAGA
TCGTGAAAGACACGCCAGTGGGCATGTGCACAGGCTCAGACAAGTGGCGC
TGTCAAATTGTTGTGTGTCCAGTGCGTGTACGTAGTATTAGTGCGACGTA
GTTACACCACAGCAGTCTGTAGCCGTGGACGATGGTACGCTAGGCTACAG
GAATGTTTGGGGAAGCGGTGTGCAGCAGTCCTGTAAGGGGTAAGGAGAGG
CATGAGTATGGTCCAGGGGGGCAGGTTCAAAGCCGGGCTTACTGACTCAT
GCCGACACCCCAGTCCCTCCCTGCCCAGGCACCGTATCGTTGGGCCCCTG
GCCCGGCTGGGCCAATGTCCAGGAGGGGCAATACACTACTAGCTGCCAGC
CGGTGCCCAAAGCAACGACACAGCTCTACGGCTGACCGTTTCATTACCCA
TGGGTGCTAACTGGGCCGTGATGATTACTTGACTTGAACGGCTGTTTGGG
TTCTGCAGCGTACTGGGGGGTTGAGCGCCGTCGGCACGAACCGTGGGACG
GGATGGCGGTCGTGCAAAACTACTTACAATGTCGTTTCACTTAACTCGCT
GCTACCCGTTTTCCTCCCTTGAACGCTGCCTGTAGTGACGAGGAGCTAAA
AAAAGGCATCGCGGGCTTCTATGACGCGTCCTCGGCACTGTGGGAGGACA
TGTGGGGAGAGCACATGCACCACGGCTACTACGAGGAGGGAAAACGACCC
GGCACCATTGCAGAGCATCGGTGAGCCCGGGCGCGGCGCCGCTTGGGGGA
ATCAGCGGTGGGCCTTGAACTACTGGTATGCCGTCCGTTGTACTGTTCTC
GTGCTTGATAACTACTTGGAAAGTGTGATTGCCATTGCTGTACGCGCCAT
GTACTTAAGAGCACGCGACAAGCACGTGCTTCATAGTACTTGGACGCACT
ACTTTACTATGCCGTACTCGTACTACTGTGTGTGCTCGCATGCACTCTAC
AACGTCCACGAACATTTCAAAGTAAGCCCGTCAAAGCAAACTACTAGCAC
CGGTTGTCTGGCCGGACGTACGCACTAGTACTGTACTTGGACGAGCTTCT
TCAACAAAGCGCCGTGCACGAGGTCACCATCAGTGATCACCACCGTGGCC
GCCACGGCCGCCCGCACCAAAGGGCCGCGCAGGTGTCGATGGTTGACAGG
AGCCTGGACTGGGCCGGGCTAGCTGACCAGCCTGTGGCGCCGGCCACCGG
CGTGGATGTGGGGTGTGGAATCGGCGGGTCTTCGAGGCACATCAGCCGAC
GCTTCGGCACAAGCATGAAGGGCATCACCCTGTCCCCGTTCCAGGTAACT
TACTGTTGTAGTTGTGATTCATACTTCGAAGTATACATTGTAACGAGGTA
CAATCGCACGCGTGTGAGATGAGTGTTCTCGTACCACAGTAGTGGTTGTC
CTACTGTACTTGGGTTGACAATCCTTTAGTCACTGGTTCCTCATTGGTGT
TGTGTACCTCCGTCCTCCAGGAGTCGAGTGGGTCGAGGGGGGGGGTGGGG
GGAGGCTTGGGGCACGGGCCTATCGGTGTGGTTGGTGTGCGACGACATCG
CTGGCTGTTGTTTACAGCCACCAAGGAATTTGGACGCGCGTGGTAGGTTA
GGCATGCTTGCCGCAAGTACTGCTACGTCGACGTGGGAGGAGAGTACAGT
GGCTGCAAGTATATACTCGTGCTACAGCATGTACTGTAGTGCGGGGTACG
TAGTGCGGTAGTGGTGCAGGTTTGCCACTTTGCTCCCGAGTGCAGCTCCG
TTACAAAATAGAGGCCAATAACGTGAGTACATATACTACTTAGTGCACAA
CTTGAGTACTCGAGTACATATATAGACTTCACAGTAGGTGCCCCAAGCAA
GACGACTCCACACACAGCAGAATATGCGGGAGGGCAAGGTTGAAAGCCGA
ATTCCGCCTTTGAAAGGGACACCCAAAGTCATTGACCGCCGGGTTGCCAA
CCCCCCGCCTCGGCCCTGCCCTGCCTCCGGCCCTCGCTCCGCCCCCGCCG
TCCTCCTGAAGAGGGAACGCGCAGAAGACATCTCCAAGAAAGCCGGGCTG
GAAGACAAGTGCCAGTTCCAGGTGCATGCCCCCCCCCCCCGCCTGCTGTA
TGCTTTGAAGCGCGTAGTTGCTGTGAAGGGTGTGTTTGTGTGTGTGTGCA
CCCATGTTGGACAGGGTTACCCCATGCCCTGTGCATGCCACCCACCGCTG
TGTGCGTTGTGTGTGTACTCTCGTCTCTGTGCATGCCCTGGACCCGAACG
ATCCGCGTATCCTTTGTGCTTTGAAGTACTTCGAAGTACTTCGAAGTACA
TATTTACTATGAAGTGTGTGTGCGTGTGTGTGTGTGTGTGTGCACTCGTG
TGGGGCTGGGTTCCCCCATGCCCTGTGCGTGCCACCGACCGATGGCCCAC
TAGAGTATACTGCTTGCTGGGCCACCGACCAACCTACGAAGGGTAGGTAG
CCTTTGCAGTTGCCGGGTGCGTGGTCAGTGGTCTCAGGACTACGGCGAGC
ACAGCCAGAGTTTGATATACATTATGCTCCGTCTTGATCGAGGCGCGTGG
TCAATGGTCTCGGGACTACGGCAAGCACAACGTGAGTAGGTACATATATA
TACTATGGTCCACTGTTGAGGTCATTGGTGACGTGGACCGCCCCTCGCCC
GGTGTTTTTCCGCTACAGTAGGAGCAATACACACTTCCAGGAAGTACTTC
AAAGTGCTTCAAAGTACTTCCGGAAGTATGTACCATGCAAACACTTGCAG
CGCCGTGCCTGCAGTGTGGTGATTGTACTCTCTATGCATAAGTTATGCGC
GGGGGGATGGTCCCGCCCTCCCACCCTGGCTTGCCAGGGGCGGGAGGGAG
ATTGTCCCGTCGTCACGCCGCGTGGTCAATGGTCTCGGGACTACGGAAAG
CACAACATGAGTACGAGTACATACTTAAGAATACACACACACACATATAT
ATATATGGTCAAATGGTCTCGGGACTAGTGTACGACAAGCACAGTGTGAG
TGCGAGCAATAAATATACTTCGAGGTACTTTGAAGTACTGTGCTCTGTTG
TGACGAGGAAGTCCTCATTGGTAGAGTCCCGTGTATTTTGAAGCGCTTAG
CGCTTGGCGGTTCATACCATTCGTGGCGGCTAGTCAGCCCTCTGCCCCCC
TCCCCTCCCCTCGCCTCGCCCCCCCCTTCCTCCCTCCGGCGACAATGGGA
GACTTCAAGACCTTGCTGTCTATATACAGTATGTATTACTCACGCTGTGC
TTGCCGTAGTCCCGAGGCCATTGACCAGGCGCCTCGGTCCAGACGGAGCA
GTTGTCTATATACTTCAAAGTCTTTCTGTTTCCTCTCTCTCTTCTGTGGC
CTCCGACAGCCTGCTTCGACCCCGCAGAACTTCAGAATGACCCCGACCCG
CTGCCTGCGGAGCTGCCGCCTCCACTTAACCCTTTTACCCCTGGGGTCCG
TATAATCATAGGTTTTTAGTGTGTTAAGTCCAATTTAGCAGGGGTAAAAG
GGTTAACAGCTCTGCCGCCTCCACTGACAGCTCTGCCGCCGCCGCGCCTC
CACCGCCGCCGTCACTGCTGCCACCGCCGCCACTGATACCTCCGTCTCCA
CCACCGCCGCCGCTGCCACCATGCCCTGTGCCTGTGCTGCATGCAGGTGG
CGGATGCTCTGGACATGCCCTTTGGGGACGGGGAGTTTGACCTGGTGTGG
AGCATGGAGAGCGGGGAACACATGCCCAAAAAGCGCGAGTGAGTGATGAG
GAGTGGGGGCAATGATGGAATATTCATCAGTAGATAGTTATCGGGCTCGA
CTGATTTTGAGGGCGGCGCTACTAACTACTTGGATTTAGTGTGGGTCAAA
CTATCGAATATCGACTCTCGATAGGTATATACTTAGATCAGTACTGTCGA
TACATCGGTCGATTTGCTTATATATTCCATCACTGACTGGGGGGTCTTGG
TGGCTCTGAAGGGCGAGAGGGGCAGGGGGGGGGAGGAGGCGGTGGGAGTT
GCTGAGTTTTCAGCTTGTGGGCTTGCTGCACGAGTTTTGTTGACGCGGTT
TCGTTTCGGTTTATTTTGTGGGGGGAGGGCATCAAAGGCTTTGGACTCAA
CCATCCTTGCTGTATCAACAGGAACAACACAGGGCGAGGTGCAGGCCACG
TCACTAAAGACCTCAGCAGTGGTCCTTCCTCATAGCTCGCCAGGGGAAAT
TTGCTATAGATGGATGTCCACAACCTGCCACCCCGGAGTGCTGCCTATTG
AGATAGCTACTGTAGAGAGAGGGGGGGAAGGGAGAGGGGGAGGGGAGAGG
AGAGGGAGAGGAGAGAAGAGAGAGGGGACAGGCAGAAACAGACTTCGGCT
GCACTGTGCTACGTTGTGCCCCCAACACCCGCCCCTGCCAGTAATCCCTC
CCTGCACCCGCCCCCACCCCCCCCCTGCTCCCGGACACAAAATGATGGGG
ACATACAATAAAACAAAATGTGACACAACACCGAACGAACAAATCGACAA
AACAAAACAACCAGCTTTGTGAGGGAGCTGGGGCGCGTGTGCGCCCCCGG
CGGGCGCATCATCATCGTGACGTGGTGTCACCGCGACCTCGCCCCCGGGG
AGGAGGGGCTGGCGCCCTCCGAGGAGCGGCTGCTGGCGAGGTGAGCATGG
GCAGGGCAGGCTTGCTGGCAGGCAGAAAGGCTGACAGGCAGGCAGGCAGT
CGAGGCAGGCTGGTGCAGTAGGCAGTCGGGACATGCTGGCAGGCAGTTGA
GGCAGGCAGGCAGGCAGATAGGTGCACGGGCCCTGTAGTTCGACGGATGG
CATCTCAATATCTCTTTGGTCTTGGAAGGCGAGAAATTTCCCTGAAAGTT
CCCTGCGGGTGATGGTGTGGGGCACGTGGTCAATGAATGGTCGTACGGCC
ACGGCTTGCAACAATGGGTACACTCCATAGTGTTGGGCTGCGGTGCCGAC
CCTACCTGCGGGTCATCGTACAGGCAGTTGAGCAGGCAGGCTGGCTGGCA
GGCAGGCAGGTACGCAGGCAGGTACGCAGGCAGGCATACAGCGGGTAGGC
AGTCAAGGCAGGCAGACAGACACACCCTCTTGTGACTTCTCTCACCTCCC
AGGCATTGAGTAGAACAATTTGGAGGCCTGCGGAACACAATCGCCAAGTA
CTTGAGCACCCGCACATGCCACACAACCGCACGCACACATGCACACACAG
ACACACACACGCACACCCACGCACACTCACCCCGCCCCCGCACAACCGTG
CACACACACATACACAAACGCACTCCCACGCACACCCACCCCGCCCCCGC
ACTGCTACAATGCCATGCTCTGCTCTGGCCCTGCCCTGGCTGTGCCCCGC
CCTGGCCTACTCTGGCTCCGTTCCGGCTCTCCCCCGCCTCTCTGGTTCCG
GTGACGCGCGCGGGCAGCATCAACCGCGCGTACTACCTCCCCCGCTGGTG
CTCCGTGGCGGACTACGTGGGGTACTGCGAGGAGGGGGGCCTGGAGGACA
TTCGCAGGGCCGACTGGACCGACAACATACAGGTGCGGGTGGAGTACCGT
AATCGTCGGAGAGATCTTGCCCTCCCATGCCAAACTTCGCGACGGCATTT
CTCGCCGAGTACTGGTCGGATTTGCACAGAAAAACTCGGAAAATCTCCTT
CAGGACCTGGGGGAGTTTTTCCGAGGGCTTTCGGGACAATTCAGAACCTT
CCCGGCTAGAAATAGTCCCCCGAAAATTGACCCGTGGGGGCAAAATCTCT
CCGACGATTACGGTACAGCGCGGTGGGTCGGGCACACACGCCGCGGCCAG
CGCAACTGTAGCAGTCGGCCGCGGGCATGGGTTGCATGCTTGCTTAGCGG
GGTCGATGGTCTCGGGACTACCGCAGGCACAACGTGAGTACATATGAATA
TATGTGTACCAATTGTGCTCGAGTATATGTATTCTCTGTACTTGCAAGTA
TACTTGACATACGTACGAGTACAGTGCATAGACAGCAGTACTATCGCTGT
CCTTGGAGTATGTGCTGCAGTAGGTAACGTAGGACTGTATGCACGGTGCC
TCACTTTTTTCGTCACGACCCACCTCTGACGGCCAGCGGCGGTTCGTCGC
TTGCTCACCCCTCTCCGCCCCTTCCCCCTTCCCCCTGTTTGCAACCCCCC
GCAACTTCCGCCGGCCGCCGTCCCTCTGCACGGTGTGTACCTACCCGCCG
TGCAAATGCGCCGGGTGTTGATTGGATTCAACCCCGCGGATGTTTTGTCC
ATTCCCATGGGTCGATGGACCTCTGGGTCTTTATTGCGGTGTCCTCCTTC
TCCTCCTGCCGCTGCTGCCCTGCTGCCCTGCTGGTGCTGCTGGTGCTTGG
TTGGATTCAACCCCATGGAACGTTTCGTCCATTCCGATGGGTGATGGACC
TCTGCGTCTTTTTGTGCGGTGTCCTCCTTCTCTTCCTGCCGCTGCTACCC
TGCGGGTGCTGGTGCTGCTGGTGCTGCTCCGTCTCCAGTACTTCTGGCCG
GCTGTAATCCGGTCATCGCTGACCACGCGAGGCATCTTGGGGCTCCTCAA
GTCCGGACCCGTCACCATCCGGGGAGCAATAGCTATGCTGGTGAGACTCC
CTCCCCCCCTCTCTTATCTTCTCTCTCTCTCTCTCTCTCTGTGTGTATGC
TGGAGGGTTGCTTGCGGTAGCCGTTTTACCGAATGACCACCGGGGCGTCG
CATGTGGGAGACCCTGATAAACAGTCCCGCACTGTTTTCTTGTGTGGTTT
GTTTTTTGCAAGAAGACAGAAAACAGCGGGTTAGGGTTCAGCAAAAGTAC
ACAGTACGTTTCGTACTCTCACTGTGCATTGTACTGTGGGAAAACCTTGG
ACCAGCCTCAGTGTCCTCATCTTGAGTTGTAAACCTCCTGGGCCGTGCGC
CTCCTCCCTCCCCCCTTTCCCTTGATTCTCGACATGACAACCTGTCAAGT
AATGTTTGCCAACCCAGAGCATTTGCGCCTCACCCCATCGCTCGTGATTG
TTTGGAACTGTTGACGATGCGCGACGGCTTTGTCCTGCAACCTCTTGCCC
GGCCATGCTGCAGGCCCCGAATGACCTCTCCTCTTCTTGCACTTGGTACT
TCCAAGTATACTCGTAGTCGGTAGGGGATGCAGTTACTGCGCACTGGTCC
CACACTACTGCACACTACTTCCGGAAGTCGTAAAGTACTTGAGTACTTCC
AAGTACTACAGTAGCACTAGCACTACACATGTACACTATACTGTAGTGCT
AGAGTACACTACTGCGTATACGAGTGCTGTAACTGTAGCCGAGCACTCCA
AGTAAGTCACTCGAGCACTTCGAAAAGTACTCATACCTAGTCTAGGTAGG
AGGGTCAACCAGGTGGAGGGGCGGGCGGACAGTACGGCACTGCCACGACC
CGGGACCCTTTCTCCAGGTGGACGAAACAACATTACCTGTTGCAGTGCTG
ACACCAGTGCAGTTACTCATAGACCAGTCACACAGTTCACCCCACTGATT
CGGGACCCCCATTGCCGCAATCAGCTTTTGCCTGCCTTGCTGCTTGCCTC
CGACACTGCACACTGCCTGCCTGCCTGCCCTGCCTTGCTTGCGTGTATGC
CTGCCTGGGTGGCTGCCCTCGGGCCACGCAAACGCCTGGCAGCTAATGGT
GCGCGGGTTCAACAAGGGGCTGGTCAAGTTCGGGCTGATCACCGCGACAA
AGCCCCTGCGAGAGTGATGAAGAGAGAGAGGCGCCAGCCACTTCTGTTCC
AGTACCTGCTAAATTAAACTTCACTTCTATGTTTTAGAAGTTGGGGACTC
CCGTACGTACTTCATACAGGCATTTTAAGTAGTTTTGAAGTACTCGAGTG
CTTGAGTACGCTGTACTCATACTACGACTAGCCCCGCTACACAAAAGGAT
CGATTTTTCGGTTTTGGGGGCGAAATTGGGCGATTTTCCTTTTTGAGGCA
AAAAGCAGGTTTTGGGCACGAATTCGGGCCCAGCCCGGTCCAAACGCCTG
ATTGTGGTGTGGAAACCCCGACCCGACCCGGCCCTGGTCCCGGTCACATT
GGCCGATCAGGGCCGGACCCGGCGGGCCGACGCCCAGACCCGGCGGGTCC
GGCTCCTTGTTGGGCAATAGTTGGCCAATTTTTGGGCAACTTTCCTCGGT
TTTTCCTTTTCCTCCTTTTTTGTGGCGGGGCTAACTACGAGTGCTACTGC
TGCTGCTACTTCGAAGAACTCTACTACACAAGCACATACTGCTGTAGTAC
ATGCTCCACCACGAGTCTGCAGCCGCAGCAAACTCAACGAGTGATACACA
CAAAGCTTGCATGCCTCCTCTTGGACTAGCTCTCGCGCGCTGGAACAGGG
GCTTTTGGGAATCCTTCTCCTTAGCTCGTGCTCCGGCGTCGCGGCAGGCG
TTTGAGGAGGCATGCGAGCTTTGAGGGCATGGACCGCACATTTTGTTGCA
GATGTGGAATAGAGCATGGCCACGCGTCTACGTTTAGACTACTATTGCGG
GGGGGGGCAGTTTGTTGTGTATGATACTCTTGGTGTGTGGCACTGAATCG
GCGTATGCTCAGGTGACGCAGATGTCGACGACTAGATGCCGATTGCACAA
CCTGTTGCAATTGTTCAAAGTACCATACACAGCAAACTCCTGCCTAGTGG
CATAGGGGTCTTCTCAGTGGGGGGGGCGTGTTGCGTTTCGGTGCCTCAGG
CAGTATATAGTACAGTATGTAGGTACTACTGTACATGGTGCTTTGGAGGT
ACTTGTCCATCAGATACTGGAAGTGCTACAAATACTTACCCTTGACTACA
TGTAGCAGGCAGGGATCCTGCACACCATATTGGCTACAGCTTTAGTCTGG
GCCGACAAAGAGCAGTCTACTTTGTATATTTTGTAGGTGCATGAGATAGG
CTAGTCATATGGTCTCCCTGGCCCTGGCCTGGAAGGCATGTGTGCACAGA
CAGTCTGGAAAGGCACGTACAGTACGTTAGCAATATGAGTACCCACTTTT
TTATTTTGAGTACTTCGTGGGGGCGATGTGAGCAATACTCTCAGACTGGC
TGTGCTGACATGACCAGCTACCTTGAGGTACACGTGCAGGCTTGGGGCCT
GGAGAGGACCGGCCCCACCTTCCCACTTGCAGTGCTGAGACCAAATGCCT
TACCAAGCACATGCATGCAGAAGGTCCAAACCATGGTGAACCGGGCTCTG
CTCAGGCACGTCTCCTGCTGGTTCACCTAGGCTCACTCGCGGGGGTGCTC
GATTCGGAGGTGGTAATCTATCTCATGTCTTGCGACCATCATTGACA back to topCoding sequence (CDS) from alignment at S-ischiensis_contig11:474982..484678- >mRNA_S-ischiensis_contig11.2017.1 ID=mRNA_S-ischiensis_contig11.2017.1|Name=mRNA_S-ischiensis_contig11.2017.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2166bp|location=Sequence derived from alignment at S-ischiensis_contig11:474982..484678- (Schizocladia ischiensis KU_0333)
ATGCGTTGCCCACTTTTTGTTCTGTTGGGTGCTCTGTTGGTCACCACGCA
TGCGTTTTTGCCCCACGCTGCGTGGTCCGCCGTCCGTTCTCCTGGAAGCA
ACAAGATGCGTTGCCCACTTTTTGTTCTGTTGGGTGCTCTGTTGGTCACC
ACGCATGCGTTTTTGCCCCACGCTGCGTGGTCCGCCGTCCGTTCTCCTGG
AAGCAACAAGAGGGAGCATGGTTCGTCGGCGCGGCGAGGTGGGGCTTTGA
GCATGGGCCCCCTCACGGCCGCTCGAAAGGCGGCGTTCTTGTGGAAGCCC
AAGGAGCGTAGAGGGAGCATGGTTCGTCGGCGCGGCGAGGTGGGGCTTTG
AGCATGGGCCCCCTCACGGCCGCTCGAAAGGCGGCGTTCTTGTGGAAGCC
CAAGGAGCGTAGTGACGAGGAGCTAAAAAAAGGCATCGCGGGCTTCTATG
ACGCGTCCTCGGCACTGTGGGAGGACATGTGGGGAGAGCACATGCACCAC
GGCTACTACGAGGAGGGAAAACGACCCGGCACCATTGCAGAGCATCGTGA
CGAGGAGCTAAAAAAAGGCATCGCGGGCTTCTATGACGCGTCCTCGGCAC
TGTGGGAGGACATGTGGGGAGAGCACATGCACCACGGCTACTACGAGGAG
GGAAAACGACCCGGCACCATTGCAGAGCATCGGGCCGCGCAGGTGTCGAT
GGTTGACAGGAGCCTGGACTGGGCCGGGCTAGCTGACCAGCCTGTGGCGC
CGGCCACCGGCGTGGATGTGGGGTGTGGAATCGGCGGGTCTTCGAGGCAC
ATCAGCCGACGCTTCGGCACAAGCATGAAGGGCATCACCCTGTCCCCGTT
CCAGGGCCGCGCAGGTGTCGATGGTTGACAGGAGCCTGGACTGGGCCGGG
CTAGCTGACCAGCCTGTGGCGCCGGCCACCGGCGTGGATGTGGGGTGTGG
AATCGGCGGGTCTTCGAGGCACATCAGCCGACGCTTCGGCACAAGCATGA
AGGGCATCACCCTGTCCCCGTTCCAGAGGGAACGCGCAGAAGACATCTCC
AAGAAAGCCGGGCTGGAAGACAAGTGCCAGTTCCAGAGGGAACGCGCAGA
AGACATCTCCAAGAAAGCCGGGCTGGAAGACAAGTGCCAGTTCCAGGTGG
CGGATGCTCTGGACATGCCCTTTGGGGACGGGGAGTTTGACCTGGTGTGG
AGCATGGAGAGCGGGGAACACATGCCCAAAAAGCGCGAGTGGCGGATGCT
CTGGACATGCCCTTTGGGGACGGGGAGTTTGACCTGGTGTGGAGCATGGA
GAGCGGGGAACACATGCCCAAAAAGCGCGACTTTGTGAGGGAGCTGGGGC
GCGTGTGCGCCCCCGGCGGGCGCATCATCATCGTGACGTGGTGTCACCGC
GACCTCGCCCCCGGGGAGGAGGGGCTGGCGCCCTCCGAGGAGCGGCTGCT
GGCGAGCTTTGTGAGGGAGCTGGGGCGCGTGTGCGCCCCCGGCGGGCGCA
TCATCATCGTGACGTGGTGTCACCGCGACCTCGCCCCCGGGGAGGAGGGG
CTGGCGCCCTCCGAGGAGCGGCTGCTGGCGAGCATCAACCGCGCGTACTA
CCTCCCCCGCTGGTGCTCCGTGGCGGACTACGTGGGGTACTGCGAGGAGG
GGGGCCTGGAGGACATTCGCAGGGCCGACTGGACCGACAACATACAGCAT
CAACCGCGCGTACTACCTCCCCCGCTGGTGCTCCGTGGCGGACTACGTGG
GGTACTGCGAGGAGGGGGGCCTGGAGGACATTCGCAGGGCCGACTGGACC
GACAACATACAGTACTTCTGGCCGGCTGTAATCCGGTCATCGCTGACCAC
GCGAGGCATCTTGGGGCTCCTCAAGTCCGGACCCGTCACCATCCGGGGAG
CAATAGCTATGCTGTACTTCTGGCCGGCTGTAATCCGGTCATCGCTGACC
ACGCGAGGCATCTTGGGGCTCCTCAAGTCCGGACCCGTCACCATCCGGGG
AGCAATAGCTATGCTGCTAATGGTGCGCGGGTTCAACAAGGGGCTGGTCA
AGTTCGGGCTGATCACCGCGACAAAGCCCCTGCGAGAGTGACTAATGGTG
CGCGGGTTCAACAAGGGGCTGGTCAAGTTCGGGCTGATCACCGCGACAAA
GCCCCTGCGAGAGTGA back to top
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