prot_S-ischiensis_contig11.2001.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig11.2001.1
Unique Nameprot_S-ischiensis_contig11.2001.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length251
Homology
BLAST of mRNA_S-ischiensis_contig11.2001.1 vs. uniprot
Match: D8LJ72_ECTSI (Photosystem II 11 kDa protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ72_ECTSI)

HSP 1 Score: 186 bits (473), Expect = 8.880e-56
Identity = 96/150 (64.00%), Postives = 113/150 (75.33%), Query Frame = 0
Query:   40 MTSGDQPVSRGEMLGAFAKAAAAAALTGSLPAL---AEEAAAPXXXXXXXEAPPTDWGMTRSYYEDAKKMVTHMRYCTNMEKGTPDMDKIATNCRREMTDFVALYRRSTNISGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLNQ 186
            M+ GD+ +SR   + AF+  AAA     ++PA    AEEAAAP       + PP+DWG+T+ YY DA KMV HMRYCTNMEKG P M  IA NC++EM +FV+ YRRS+NI+GKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRL Q
Sbjct:   44 MSVGDEAMSRKNAIAAFSAGAAAVLGAAAVPAAVFAAEEAAAPAPAAVSEDGPPSDWGLTKQYYPDASKMVRHMRYCTNMEKGDPYMADIANNCKKEMVEFVSNYRRSSNINGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLLQ 193          
BLAST of mRNA_S-ischiensis_contig11.2001.1 vs. uniprot
Match: A0A836CEQ5_9STRA (Photosystem II Pbs27-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEQ5_9STRA)

HSP 1 Score: 169 bits (429), Expect = 2.830e-49
Identity = 97/188 (51.60%), Postives = 119/188 (63.30%), Query Frame = 0
Query:    1 MQLVAIATLGFLGCTSAFAPVGMPVTGRATRCGAATPLSMTSGDQPVSRGEMLGAFAKAAAAAALTGSLPALAEEAAAPXXXXXXXEAP----PTDWGMTRSYYEDAKKMVTHMRYCTNMEKGTPDMDKIATNCRREMTDFVALYRRSTNISGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRL 184
            M+   +AT+  LG   AF P     +  A R  A + + M+S    V R   L + A AA   A     PA AE+AA         +AP    PTDWG+T+ YY DA K+V+HMRY T++EKG   ++  A NCR+EM DFV+ YRR  N+SGKLSYSNLYTSI+VLAGHYASYGPKFPVPEKRRKRL
Sbjct:    1 MKGAVVATISLLGGACAFQPTSFAGSALAPRTAATSAVRMSSEASDVDRRAFLSSTAAAAMTVASAFVAPAFAEDAA-------PAKAPLGPMPTDWGLTKDYYTDASKVVSHMRYATSLEKGAAGIEMTAKNCRQEMIDFVSYYRRFPNVSGKLSYSNLYTSINVLAGHYASYGPKFPVPEKRRKRL 181          
BLAST of mRNA_S-ischiensis_contig11.2001.1 vs. uniprot
Match: A0A836C8X1_9STRA (Photosystem II Pbs27-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8X1_9STRA)

HSP 1 Score: 161 bits (408), Expect = 2.860e-46
Identity = 97/185 (52.43%), Postives = 113/185 (61.08%), Query Frame = 0
Query:    1 MQLVAIATLGFLGCTSAFAPVGMPVTGRATRCGAATPLSMTSGDQPVSRGEMLGAFAKAAAAAALTGSLPALAEEA-AAPXXXXXXXEAPPTDWGMTRSYYEDAKKMVTHMRYCTNMEKGTPDMDKIATNCRREMTDFVALYRRSTNISGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRL 184
            M+  A+ATL  +G  SAF  V M V   A               Q  SR   L   A A AAA      PALA  A   P          P DWG+T+ YY DA K+V+HMRY T+MEKG  +++ +A NCR+EM DFV+ YRR  N+SGKLSYSNLYTSI+VLAGHYASYGPKFPVPEKRRKRL
Sbjct:    1 MKSTAVATLALVGAASAFHSVTMTVPKSAQVA------------QDFSRRGFLSTVAAAGAAAVA----PALAIAADGTPAVEKVPLGPMPVDWGLTKDYYTDASKVVSHMRYATSMEKGAANIENVAKNCRQEMIDFVSYYRRFPNVSGKLSYSNLYTSINVLAGHYASYGPKFPVPEKRRKRL 169          
BLAST of mRNA_S-ischiensis_contig11.2001.1 vs. uniprot
Match: A0A7S3ZPN6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZPN6_9STRA)

HSP 1 Score: 150 bits (378), Expect = 2.030e-42
Identity = 73/121 (60.33%), Postives = 89/121 (73.55%), Query Frame = 0
Query:   69 LPALAEEAAAPXXXXXXXEAP---PTDWGMTRSYYEDAKKMVTHMRYCTNMEKGTPDMDKIATNCRREMTDFVALYRRSTNISGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLNQ 186
            +PA A++A A         AP   P DWG+T  YY DA K+V HMR  T++EKG P+M+ IA NC++EM DFV+ YRR TN+SGK S+S LYT+I+VLAGHY SYGPKFPVPEKRRKRL Q
Sbjct:    1 MPAFADDAPAAPPAEAEAPAPVEFPKDWGITSDYYTDAAKVVAHMRLATSLEKGAPNMEMIALNCKKEMIDFVSFYRRFTNVSGKQSFSTLYTAINVLAGHYTSYGPKFPVPEKRRKRLFQ 121          
BLAST of mRNA_S-ischiensis_contig11.2001.1 vs. uniprot
Match: A0A7R9U8B8_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8B8_9STRA)

HSP 1 Score: 145 bits (365), Expect = 1.680e-39
Identity = 72/128 (56.25%), Postives = 93/128 (72.66%), Query Frame = 0
Query:   59 AAAAAALTGSLPALAEEAAAPXXXXXXXEAPPTDWGMTRSYYEDAKKMVTHMRYCTNMEKGTPDMDKIATNCRREMTDFVALYRRSTNISGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLNQ 186
            AA  + L G+  A+A+E AAP         PPTDWG++  YY+DA ++V HMRY T M K TP+ + IATNC++EM DFV+ YRR  N++GK S+S LYT+I+VLAGHY +YG KFPVPEKR+KRL Q
Sbjct:   70 AALGSLLAGAQMAVADEVAAPASTELGP--PPTDWGLSNQYYDDAVRVVNHMRYATIMPKSTPNYEAIATNCKKEMIDFVSFYRRFPNVAGKPSFSTLYTAINVLAGHYTNYGVKFPVPEKRKKRLLQ 195          
BLAST of mRNA_S-ischiensis_contig11.2001.1 vs. uniprot
Match: A0A7S2UVY8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVY8_9STRA)

HSP 1 Score: 145 bits (365), Expect = 2.230e-39
Identity = 80/152 (52.63%), Postives = 103/152 (67.76%), Query Frame = 0
Query:   37 PLSMTSGDQPVSRGEMLGAFAKAAAAAALTGSLPALAEEAAAPXXXXXXXEAPP--TDWGMTRSYYEDAKKMVTHMRYCTNMEKGTPDMDKIATNCRREMTDFVALYRRSTNISGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLNQ 186
            PL M +G  PVSR +++   A  + A  +T    A AEEA AP       +  P  TD+ +   YY DA  +V +MRY T M+KGTP+M++I  + R++M DFVA YRR+  ++G+LSYS LYTSI+VLAGHYASYGPKFPVPEKRRKRL Q
Sbjct:   56 PLQMAAG--PVSRRDLISNIATISVAGVMTTGAAAFAEEAVAPAAAPAKPDMGPVPTDFKVKGEYYPDAILLVKNMRYATLMDKGTPNMEQIGKSVRKQMVDFVAQYRRNNKVNGRLSYSTLYTSINVLAGHYASYGPKFPVPEKRRKRLLQ 205          
BLAST of mRNA_S-ischiensis_contig11.2001.1 vs. uniprot
Match: A0A7S1XRA0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XRA0_9STRA)

HSP 1 Score: 140 bits (352), Expect = 1.320e-37
Identity = 61/97 (62.89%), Postives = 80/97 (82.47%), Query Frame = 0
Query:   90 PTDWGMTRSYYEDAKKMVTHMRYCTNMEKGTPDMDKIATNCRREMTDFVALYRRSTNISGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLNQ 186
            PTDWG+T  YY+DA ++V+HMRY T+M KGTP+ + IA +C++EM DFV+ YRR  N++GK S+S LYT+I+VLAGHY +YG KFPVPEKR+KRL Q
Sbjct:   95 PTDWGLTNEYYKDAPRVVSHMRYATSMPKGTPNYENIAKSCKKEMIDFVSFYRRFPNVAGKPSFSTLYTAINVLAGHYTNYGLKFPVPEKRKKRLFQ 191          
BLAST of mRNA_S-ischiensis_contig11.2001.1 vs. uniprot
Match: F0YDF6_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDF6_AURAN)

HSP 1 Score: 135 bits (341), Expect = 2.850e-37
Identity = 62/88 (70.45%), Postives = 74/88 (84.09%), Query Frame = 0
Query:   99 YYEDAKKMVTHMRYCTNMEKGTPDMDKIATNCRREMTDFVALYRRSTNISGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLNQ 186
            YY DA+K+V HMR  T+++KG PDM+KIA N ++EM DFVA YRR TN+SGK S+S LYT+I+VLAGHY SYGPKFPVPEKRRKRL Q
Sbjct:    2 YYTDAQKVVAHMRLATSLDKGAPDMEKIALNTKKEMIDFVAFYRRFTNVSGKQSFSTLYTAINVLAGHYTSYGPKFPVPEKRRKRLYQ 89          
BLAST of mRNA_S-ischiensis_contig11.2001.1 vs. uniprot
Match: W7TYA6_9STRA (Photosystem ii 11 kd protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TYA6_9STRA)

HSP 1 Score: 135 bits (341), Expect = 3.930e-36
Identity = 68/128 (53.12%), Postives = 91/128 (71.09%), Query Frame = 0
Query:   60 AAAAALTGSLPALA-EEAAAPXXXXXXXEAPPTDWGMTRSYYEDAKKMVTHMRYCTNMEKGTPDMDKIATNCRREMTDFVALYRRSTNISGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLNQ 186
            AA A L+  LPALA EE   P         PP ++ +++ YY+DA ++V HM+Y T M + TP+ + IA + + EMTDFV+ YRR  N++GK S+S LYT+I+V+AGHYASYGPKFP+PEKRRKRL Q
Sbjct:   50 AAMAGLSLVLPALAAEEGGVPTAAPVDLGVPPVNFDLSKEYYKDAAQVVNHMKYATFMNRDTPNYENIAKSVKNEMTDFVSYYRRFNNVAGKPSFSTLYTAINVMAGHYASYGPKFPIPEKRRKRLQQ 177          
BLAST of mRNA_S-ischiensis_contig11.2001.1 vs. uniprot
Match: A0A7S3NKQ6_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NKQ6_9STRA)

HSP 1 Score: 132 bits (332), Expect = 7.130e-35
Identity = 59/97 (60.82%), Postives = 79/97 (81.44%), Query Frame = 0
Query:   90 PTDWGMTRSYYEDAKKMVTHMRYCTNMEKGTPDMDKIATNCRREMTDFVALYRRSTNISGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLNQ 186
            PT++G+T+ YY DA K+V HMR  T+++KG+P++++IA   ++EM  FVA YRR T ++GK S+S LYT+I+VLAGHY SYGPKFPVPEKRRKRL Q
Sbjct:   74 PTNYGITQDYYTDAAKVVAHMRLATSLDKGSPNIEQIAIETKKEMNAFVAFYRRFTTVTGKQSFSTLYTAINVLAGHYTSYGPKFPVPEKRRKRLYQ 170          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig11.2001.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJ72_ECTSI8.880e-5664.00Photosystem II 11 kDa protein n=2 Tax=Ectocarpus T... [more]
A0A836CEQ5_9STRA2.830e-4951.60Photosystem II Pbs27-domain-containing protein n=1... [more]
A0A836C8X1_9STRA2.860e-4652.43Photosystem II Pbs27-domain-containing protein n=1... [more]
A0A7S3ZPN6_9STRA2.030e-4260.33Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7R9U8B8_9STRA1.680e-3956.25Hypothetical protein n=2 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2UVY8_9STRA2.230e-3952.63Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S1XRA0_9STRA1.320e-3762.89Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
F0YDF6_AURAN2.850e-3770.45Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
W7TYA6_9STRA3.930e-3653.13Photosystem ii 11 kd protein n=2 Tax=Monodopsidace... [more]
A0A7S3NKQ6_9STRA7.130e-3560.82Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025585Photosystem II Pbs27PFAMPF13326PSII_Pbs27coord: 54..186
e-value: 8.7E-24
score: 84.4
IPR025585Photosystem II Pbs27PANTHERPTHR34041FAMILY NOT NAMEDcoord: 12..185
IPR025585Photosystem II Pbs27HAMAPMF_01481PSII_Psb27coord: 57..194
score: 20.057
IPR038450Photosystem II Pbs27 superfamilyGENE3D1.20.58.810coord: 89..189
e-value: 3.2E-33
score: 116.0
NoneNo IPR availablePANTHERPTHR34041:SF1PHOTOSYSTEM II REPAIR PROTEIN PSB27-H1, CHLOROPLASTICcoord: 12..185
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..12
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..250
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..17
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..17
score: 0.764

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig11contigS-ischiensis_contig11:329029..334010 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig11.2001.1mRNA_S-ischiensis_contig11.2001.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig11 328828..334135 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig11.2001.1 ID=prot_S-ischiensis_contig11.2001.1|Name=mRNA_S-ischiensis_contig11.2001.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=251bp
MQLVAIATLGFLGCTSAFAPVGMPVTGRATRCGAATPLSMTSGDQPVSRG
EMLGAFAKAAAAAALTGSLPALAEEAAAPAAPAPAPEAPPTDWGMTRSYY
EDAKKMVTHMRYCTNMEKGTPDMDKIATNCRREMTDFVALYRRSTNISGK
LSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLNQVKVLWWLLCRLKKV
ATVTRSCRCCLERPGLLLPSAWARQPRARAFYVKYPRRVVHGLGTTASTT
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025585PSII_Pbs27
IPR038450PSII_Pbs27_sf