mRNA_S-ischiensis_contig11.1968.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig11.1968.1 vs. uniprot
Match: A0A835YTG3_9STRA (Putative NIN-like transcription factor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTG3_9STRA) HSP 1 Score: 84.3 bits (207), Expect = 6.340e-14 Identity = 42/97 (43.30%), Postives = 73/97 (75.26%), Query Frame = 2
Query: 227 KLTLHDLESMYHMPLAEVAKHHNLSVTMIKTICRQFGIRRWPYRQVHSINRTIEQLQQQARTVSSASEASRVAAQIAALQTKKMYITKLGRTSSLRT 517
++TL L+S Y++PLAE+AK LS+T++K ICR+FGI+RWP+RQ+ S+N+T ++L+++A+ +A E + + AQ+ L+ KK +T+ G +S L++
Sbjct: 10 QITLELLQSYYNVPLAELAKELGLSLTLLKKICRKFGIQRWPHRQIRSLNKTAQELKERAQCALTAEEHAEIEAQLQLLEKKKRLVTR-GASSGLQS 105
BLAST of mRNA_S-ischiensis_contig11.1968.1 vs. uniprot
Match: H6WBB7_VAULI (Putative NIN-like transcription factor n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WBB7_VAULI) HSP 1 Score: 83.6 bits (205), Expect = 1.040e-13 Identity = 44/97 (45.36%), Postives = 69/97 (71.13%), Query Frame = 2
Query: 227 KLTLHDLESMYHMPLAEVAKHHNLSVTMIKTICRQFGIRRWPYRQVHSINRTIEQLQQQARTVSSASEASRVAAQIAALQTKKMYITKLGRTSSLRT 517
++TL L+S Y++PLAE+AK LS+T++K ICR+FGI+RWP+RQ+ SIN+ I+ L ++ +V+S E + + QI L+ K+ +TK G +S L T
Sbjct: 13 EITLELLQSYYNVPLAELAKELGLSLTLLKKICRKFGIQRWPHRQIRSINKNIQDLNERINSVNSPDEHAELRNQIGLLEKKRRLVTK-GASSGLHT 108
BLAST of mRNA_S-ischiensis_contig11.1968.1 vs. uniprot
Match: M4BJE9_HYAAE (RWP-RK domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BJE9_HYAAE) HSP 1 Score: 77.8 bits (190), Expect = 6.990e-12 Identity = 48/135 (35.56%), Postives = 78/135 (57.78%), Query Frame = 2
Query: 206 RLTARGPKLTLHDLESMYHMPLAEVAKHHNLSVTMIKTICRQFGIRRWPYRQVHSINRTIEQLQQQARTVSSASEASRVAAQIAALQTKKMYITK-LGRTSSLRTGSAPCSDEDEAPEMLAVRSFSEPEGLRATN 607
RLTA +LTL +L + P+ EVA+ + T +K +CRQ GI+RWP+RQ+ S+NRTI+ L+Q +S E + AAQI L+ K+ + + T L+ P + + A E+++ R+ + E L++ N
Sbjct: 77 RLTALSRELTLEELRPHFGQPIVEVAREFGICTTFLKKLCRQCGIKRWPHRQIRSLNRTIQMLEQVESATTSPEEKATYAAQIKELKDKQRAVMEDPDVTGGLKRMKKPGTPKS-ATEIISTRADRDKESLQSRN 210
BLAST of mRNA_S-ischiensis_contig11.1968.1 vs. uniprot
Match: A0A835Z1M5_9STRA (Putative NIN-like transcription factor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1M5_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 1.790e-11 Identity = 39/96 (40.62%), Postives = 69/96 (71.88%), Query Frame = 2
Query: 230 LTLHDLESMYHMPLAEVAKHHNLSVTMIKTICRQFGIRRWPYRQVHSINRTIEQLQQQARTVSSASEASRVAAQIAALQTKKMYITKLGRTSSLRT 517
+TL L+S Y++PLAE+AK LS+T++K ICR++GI+RWP+RQ+ SIN++ ++L ++ +S E + + +Q+ L+ KK +T+ G +S L++
Sbjct: 14 ITLELLQSFYNVPLAELAKELGLSLTLLKKICRKYGIQRWPHRQIRSINKSAQELTERINGATSHEERAELQSQLHLLEKKKRLVTR-GASSGLQS 108
BLAST of mRNA_S-ischiensis_contig11.1968.1 vs. uniprot
Match: A0A2P4X9X3_9STRA (RWP-RK domain-containing protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X9X3_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 4.740e-11 Identity = 38/96 (39.58%), Postives = 59/96 (61.46%), Query Frame = 2
Query: 197 RPERLTARGPKLTLHDLESMYHMPLAEVAKHHNLSVTMIKTICRQFGIRRWPYRQVHSINRTIEQLQQQARTVSSASEASRVAAQIAALQTKKMYI 484
R RLTA +LTL +L + P+ EVA+ + T +K ICR+ GI+RWP+RQ+ S+NRTIE L+Q ++ + + A+QI L+ K+ +
Sbjct: 76 RGARLTALSRELTLEELRPHFGRPIVEVAREFGICTTFLKKICRRCGIKRWPHRQIRSLNRTIEMLEQVESVATNVEDKEKYASQIEELKEKQRAV 171
BLAST of mRNA_S-ischiensis_contig11.1968.1 vs. uniprot
Match: A0A225V2I8_9STRA (Putative extracellular protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225V2I8_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 9.710e-11 Identity = 44/133 (33.08%), Postives = 70/133 (52.63%), Query Frame = 2
Query: 197 RPERLTARGPKLTLHDLESMYHMPLAEVAKHHNLSVTMIKTICRQFGIRRWPYRQVHSINRTIEQLQQQARTVSSASEASRVAAQIAALQTKKMYITKLGRTSSLRTGSAPCSDEDEAPEMLAVRSFSEPEGL 595
R RLTA +LTL +L + P+ EVA+ + T +K ICR+ GI+RWP+RQ+ S+NRTIE L+Q + + + AAQI L+ K+ + + D D ++ ++ +S P G+
Sbjct: 56 RGARLTALSRELTLEELRPHFGRPIVEVAREFGICTTFLKKICRRCGIKRWPHRQIRSLNRTIEMLEQVESVAKNPEDKDKYAAQIEELKEKQRAVME---------------DPDTNGKLKRMKKYSTPRGV 173
BLAST of mRNA_S-ischiensis_contig11.1968.1 vs. uniprot
Match: A0A2D4BLP8_PYTIN (RWP-RK domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BLP8_PYTIN) HSP 1 Score: 73.9 bits (180), Expect = 1.990e-10 Identity = 37/96 (38.54%), Postives = 61/96 (63.54%), Query Frame = 2
Query: 197 RPERLTARGPKLTLHDLESMYHMPLAEVAKHHNLSVTMIKTICRQFGIRRWPYRQVHSINRTIEQLQQQARTVSSASEASRVAAQIAALQTKKMYI 484
R +LT +L + +L + + P+ +VA+ + T +K ICR+ GI+RWP+RQ+ S+NRTIE L+Q + ++A E + AAQIA ++ KK +
Sbjct: 105 RNAQLTTLSKELNIEELRAHFGKPIVDVAREFGICTTFLKKICRRCGIKRWPHRQIRSLNRTIEMLRQAEKNTTNAQEKVKYAAQIAEVEAKKRAV 200
BLAST of mRNA_S-ischiensis_contig11.1968.1 vs. uniprot
Match: A0A425CIF9_9STRA (RWP-RK domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A425CIF9_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 3.510e-10 Identity = 38/96 (39.58%), Postives = 57/96 (59.38%), Query Frame = 2
Query: 197 RPERLTARGPKLTLHDLESMYHMPLAEVAKHHNLSVTMIKTICRQFGIRRWPYRQVHSINRTIEQLQQQARTVSSASEASRVAAQIAALQTKKMYI 484
R RLTA +LTL L + P+ EVA+ + T +K ICR+ GI+RWP+RQ+ S+NRTI+ L+Q ++ E +R QI L+ K+ +
Sbjct: 77 RGARLTALSRELTLEKLRPHFDRPIVEVAREFGICTTFLKKICRRCGIKRWPHRQIRSLNRTIQMLEQVESATTNPEEKARYKTQIEELKDKQRAV 172
BLAST of mRNA_S-ischiensis_contig11.1968.1 vs. uniprot
Match: A0A662X6K6_9STRA (RWP-RK domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X6K6_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 4.950e-10 Identity = 40/96 (41.67%), Postives = 58/96 (60.42%), Query Frame = 2
Query: 197 RPERLTARGPKLTLHDLESMYHMPLAEVAKHHNLSVTMIKTICRQFGIRRWPYRQVHSINRTIEQLQQQARTVSSASEASRVAAQIAALQTKKMYI 484
R +L+ LTL +L + + P+ EVA+ + T +K ICR+ GI+RWP+RQ+ S+ RTIE LQQ SS E ++ AAQI L+ KK +
Sbjct: 75 RNAQLSTLSRDLTLDELRAHFDKPIVEVAREFGICTTFLKKICRRCGIKRWPHRQIRSLARTIEMLQQVEALASSPQEKAKYAAQITQLEEKKRAV 170
BLAST of mRNA_S-ischiensis_contig11.1968.1 vs. uniprot
Match: A0A835Z7T4_9STRA (RWP-RK domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7T4_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 7.560e-10 Identity = 34/88 (38.64%), Postives = 59/88 (67.05%), Query Frame = 2
Query: 227 KLTLHDLESMYHMPLAEVAKHHNLSVTMIKTICRQFGIRRWPYRQVHSINRTIEQLQQQARTVSSASEASRVAAQIAALQTKKMYITK 490
+L + LE YH+PL A+ ++S+TM+K +CRQ+GI+RWP+RQV S+N+++ +L+++ S A+ + A+ L+TK+ I K
Sbjct: 12 RLPVSVLEEFYHVPLNIAARELSVSLTMLKKLCRQYGIKRWPHRQVSSLNKSLGKLEEKILGASDDKAAAALRAKAGPLRTKRELIIK 99 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig11.1968.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig11.1968.1 >prot_S-ischiensis_contig11.1968.1 ID=prot_S-ischiensis_contig11.1968.1|Name=mRNA_S-ischiensis_contig11.1968.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=353bp MSRAGGGDQARRPQPEIRSLTGRGPRLRDALQEGGPRPERLTARGPKLTLback to top mRNA from alignment at S-ischiensis_contig11:101664..103631- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig11.1968.1 ID=mRNA_S-ischiensis_contig11.1968.1|Name=mRNA_S-ischiensis_contig11.1968.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1968bp|location=Sequence derived from alignment at S-ischiensis_contig11:101664..103631- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig11:101664..103631- >mRNA_S-ischiensis_contig11.1968.1 ID=mRNA_S-ischiensis_contig11.1968.1|Name=mRNA_S-ischiensis_contig11.1968.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2118bp|location=Sequence derived from alignment at S-ischiensis_contig11:101664..103631- (Schizocladia ischiensis KU_0333)back to top |