mRNA_S-ischiensis_contig91.20914.1 (mRNA) Schizocladia ischiensis KU_0333
|
Overview
Homology
BLAST of mRNA_S-ischiensis_contig91.20914.1 vs. uniprot
Match: D3BS35_POLPP (Nucleolar protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BS35_POLPP) HSP 1 Score: 72.8 bits (177), Expect = 1.520e-12 Identity = 39/72 (54.17%), Postives = 48/72 (66.67%), Query Frame = 3
Query: 9 YREGAVVGMGVGSGFAVLALELADGQRHDLLDLCCAPGTKLVMAADMLRGRGADRSTVTGVDISLKRLNVCR 224
Y+ G + GM SG A+LAL+ G +LD+CCAPGTKL M ADM+ G G TVTGVDISL+RL C+
Sbjct: 139 YKNGLIYGMDASSGAAILALDPQPGDN--VLDICCAPGTKLSMIADMMNGEG----TVTGVDISLQRLGSCK 204
BLAST of mRNA_S-ischiensis_contig91.20914.1 vs. uniprot
Match: A0A1Y1W808_9FUNG (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Linderina pennispora TaxID=61395 RepID=A0A1Y1W808_9FUNG) HSP 1 Score: 71.6 bits (174), Expect = 3.370e-12 Identity = 39/76 (51.32%), Postives = 51/76 (67.11%), Query Frame = 3
Query: 6 AYREGAVVGMGVGSGFAVLALELADGQRHDLLDLCCAPGTKLVMAADMLRGRGADRSTVTGVDISLKRLNVCRGAV 233
AY GA+ GM V SG A LALE+ G +LDLCCAPG KL++ A+ L+G+G+ VTGVDI+ R+ +CR V
Sbjct: 82 AYARGAITGMDVSSGIAALALEVRPGDN--VLDLCCAPGAKLLLLAEHLQGKGS----VTGVDIAEHRMAICRSLV 151
BLAST of mRNA_S-ischiensis_contig91.20914.1 vs. uniprot
Match: UPI00064501BB (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI00064501BB) HSP 1 Score: 70.1 bits (170), Expect = 1.340e-11 Identity = 37/73 (50.68%), Postives = 51/73 (69.86%), Query Frame = 3
Query: 6 AYREGAVVGMGVGSGFAVLALELADGQRHDLLDLCCAPGTKLVMAADMLRGRGADRSTVTGVDISLKRLNVCR 224
AY+ G + GM SG AVLAL+ G +LD+CCAPGTKL + +D+++G+G TVTGVDIS++RL C+
Sbjct: 140 AYKNGEIYGMDASSGAAVLALDPQPGDN--VLDICCAPGTKLSLISDVMKGQG----TVTGVDISMQRLASCK 206
BLAST of mRNA_S-ischiensis_contig91.20914.1 vs. uniprot
Match: A0A5D6Y5W4_9STRA (SAM_MT_RSMB_NOP domain-containing protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y5W4_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 1.780e-11 Identity = 37/73 (50.68%), Postives = 50/73 (68.49%), Query Frame = 3
Query: 6 AYREGAVVGMGVGSGFAVLALELADGQRHDLLDLCCAPGTKLVMAADMLRGRGADRSTVTGVDISLKRLNVCR 224
AYR G + G+ + SGFAV L++ G +LDLCCAPG KL M AD+L+ RG+ VTGVD+S +RL+ C+
Sbjct: 81 AYRAGEIYGIDISSGFAVSLLDVRPGDH--VLDLCCAPGAKLTMIADLLQLRGS----VTGVDVSRQRLSACK 147
BLAST of mRNA_S-ischiensis_contig91.20914.1 vs. uniprot
Match: A0A7S4R2F3_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4R2F3_9DINO) HSP 1 Score: 69.7 bits (169), Expect = 1.840e-11 Identity = 39/72 (54.17%), Postives = 47/72 (65.28%), Query Frame = 3
Query: 9 YREGAVVGMGVGSGFAVLALELADGQRHDLLDLCCAPGTKLVMAADMLRGRGADRSTVTGVDISLKRLNVCR 224
YR+G + GM SG AVLAL + G HD+LDLCCAPG KLV A+ LRGRG + GVD++ RL CR
Sbjct: 167 YRDGRLFGMDAASGAAVLALGVEPG--HDVLDLCCAPGAKLVYLAERLRGRGR----LLGVDVAEHRLAACR 232
BLAST of mRNA_S-ischiensis_contig91.20914.1 vs. uniprot
Match: A0A8J4PS40_9MYCE (SAM_MT_RSMB_NOP domain-containing protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PS40_9MYCE) HSP 1 Score: 69.7 bits (169), Expect = 1.850e-11 Identity = 35/73 (47.95%), Postives = 50/73 (68.49%), Query Frame = 3
Query: 6 AYREGAVVGMGVGSGFAVLALELADGQRHDLLDLCCAPGTKLVMAADMLRGRGADRSTVTGVDISLKRLNVCR 224
AY++G + GM SG A+LAL+ G +LD+CCAPGTKL M +D++ G+G+ +TGVDIS RL +C+
Sbjct: 131 AYKDGLIYGMDASSGAAILALDPKPGDN--ILDICCAPGTKLCMISDLMNGQGS----LTGVDISRPRLGICK 197
BLAST of mRNA_S-ischiensis_contig91.20914.1 vs. uniprot
Match: H3GIW7_PHYRM (SAM_MT_RSMB_NOP domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GIW7_PHYRM) HSP 1 Score: 68.6 bits (166), Expect = 4.130e-11 Identity = 37/72 (51.39%), Postives = 48/72 (66.67%), Query Frame = 3
Query: 9 YREGAVVGMGVGSGFAVLALELADGQRHDLLDLCCAPGTKLVMAADMLRGRGADRSTVTGVDISLKRLNVCR 224
YR+G + G+ + SGFAV L++ G+ +LDLCCAPG KL M AD+L+ RG+ VTGVD S RL CR
Sbjct: 111 YRDGQLYGIDISSGFAVSLLDVRPGEH--VLDLCCAPGAKLTMIADLLQLRGS----VTGVDFSRPRLGACR 176
BLAST of mRNA_S-ischiensis_contig91.20914.1 vs. uniprot
Match: G4ZY87_PHYSP (SAM_MT_RSMB_NOP domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZY87_PHYSP) HSP 1 Score: 68.2 bits (165), Expect = 5.700e-11 Identity = 36/72 (50.00%), Postives = 48/72 (66.67%), Query Frame = 3
Query: 9 YREGAVVGMGVGSGFAVLALELADGQRHDLLDLCCAPGTKLVMAADMLRGRGADRSTVTGVDISLKRLNVCR 224
Y+EG + G+ + SG+AV L++ G+ +LDLCCAPG KL M AD+L+ RG+ VTGVD S RL CR
Sbjct: 115 YKEGQLYGIDISSGYAVSLLDIQPGEH--VLDLCCAPGAKLTMIADLLQLRGS----VTGVDFSRSRLGACR 180
BLAST of mRNA_S-ischiensis_contig91.20914.1 vs. uniprot
Match: D0NW96_PHYIT (SAM_MT_RSMB_NOP domain-containing protein n=3 Tax=Phytophthora infestans TaxID=4787 RepID=D0NW96_PHYIT) HSP 1 Score: 68.2 bits (165), Expect = 5.790e-11 Identity = 36/72 (50.00%), Postives = 47/72 (65.28%), Query Frame = 3
Query: 9 YREGAVVGMGVGSGFAVLALELADGQRHDLLDLCCAPGTKLVMAADMLRGRGADRSTVTGVDISLKRLNVCR 224
Y+EG + G+ + SG+AV L + G+ +LDLCCAPG KL M AD+L+ RG+ VTGVD S RL CR
Sbjct: 113 YKEGQIYGIDISSGYAVTLLNINPGEH--VLDLCCAPGAKLTMIADLLQLRGS----VTGVDFSRSRLGACR 178
BLAST of mRNA_S-ischiensis_contig91.20914.1 vs. uniprot
Match: A0A3M6VKX8_9STRA (SAM_MT_RSMB_NOP domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VKX8_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 5.990e-11 Identity = 37/72 (51.39%), Postives = 48/72 (66.67%), Query Frame = 3
Query: 9 YREGAVVGMGVGSGFAVLALELADGQRHDLLDLCCAPGTKLVMAADMLRGRGADRSTVTGVDISLKRLNVCR 224
Y++G V G+ + SGFAV LE+ G+ +LDLCCAPG KL M AD+L+ RG+ VTG+D S RL CR
Sbjct: 109 YQDGQVYGIDISSGFAVSLLEIQPGEH--VLDLCCAPGAKLTMIADLLQLRGS----VTGIDYSRSRLCACR 174 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig91.20914.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig91.20914.1 >prot_S-ischiensis_contig91.20914.1 ID=prot_S-ischiensis_contig91.20914.1|Name=mRNA_S-ischiensis_contig91.20914.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=111bp MGVGSGFAVLALELADGQRHDLLDLCCAPGTKLVMAADMLRGRGADRSTVback to top mRNA from alignment at S-ischiensis_contig91:315028..318113- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig91.20914.1 ID=mRNA_S-ischiensis_contig91.20914.1|Name=mRNA_S-ischiensis_contig91.20914.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=3086bp|location=Sequence derived from alignment at S-ischiensis_contig91:315028..318113- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig91:315028..318113- >mRNA_S-ischiensis_contig91.20914.1 ID=mRNA_S-ischiensis_contig91.20914.1|Name=mRNA_S-ischiensis_contig91.20914.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=666bp|location=Sequence derived from alignment at S-ischiensis_contig91:315028..318113- (Schizocladia ischiensis KU_0333)back to top |