mRNA_S-ischiensis_contig9.20818.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig9.20818.1 vs. uniprot
Match: A0A836CAX1_9STRA (Exonuclease 1 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAX1_9STRA) HSP 1 Score: 299 bits (766), Expect = 3.720e-97 Identity = 152/282 (53.90%), Postives = 198/282 (70.21%), Query Frame = 2
Query: 2 YVNFCMKRVAMLKHNGVVPYMVFDGASLPAKQGKNRERRESRKSNRGKGMAAIAAGEDRAAQRHFAKGVEVTHFMAHKLMKELRRAGVKFVVAPYEADAQLAYMMRVGIIDAVISEDSDCLAYGCAKVLFKLNNEGSGQEIQLRNLPANEGLDLTGWKNSMFLDWCCLTGCDYLQPVRGLGIATAHKLVSRHRTMDKILAALES--KWDLPPDFSRNYKMARLTFRHQIVYDPARKRTTHLRPVGDAAH-RMDLSFLGKDLPAEAAEGVAAGRLMPSTYEPY 838
+V FCM+R+ +L +GV P++VFDGA LP K G N+ RR++R +N K AA+AAGE AAQ+H+A+ V +TH +A ++ L R G+KFVVAPYEADAQLA+M + G+IDA+I+EDSDCL + C ++LFKL N+GS QEI+ R+L +NE L GW SMFLD C L GCDYL V GLGI TAHKLV+RHR+ +LAAL + K+ LP DF ++MARLTFRHQ VYDP + L P+ +A R +L FLG +LP AE +A + P T EPY
Sbjct: 55 FVRFCMRRIELLLSHGVTPWVVFDGAPLPMKHGVNKARRDARAANLAKAEAAMAAGEPIAAQQHYARSVAITHELARMFIRSLARRGIKFVVAPYEADAQLAFMSQQGLIDAIITEDSDCLPFCCKRMLFKLENDGSAQEIRARDLSSNENPSLAGWTYSMFLDMCLLAGCDYLPRVHGLGIGTAHKLVARHRSHKPMLAALRASRKFALPDDFEDRFEMARLTFRHQRVYDPRSRCVVPLMPLPPSARERQNLDFLGPELPPHIAEAIANSTMDPYTREPY 336
BLAST of mRNA_S-ischiensis_contig9.20818.1 vs. uniprot
Match: D7FQX9_ECTSI (Exonuclease 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQX9_ECTSI) HSP 1 Score: 291 bits (744), Expect = 1.110e-90 Identity = 148/233 (63.52%), Postives = 179/233 (76.82%), Query Frame = 2
Query: 2 YVNFCMKRVAMLKHNGVVPYMVFDGASLPAKQGKNRERRESRKSNRGKGMAAIAAGEDRAAQRHFAKGVEVTHFMAHKLMKELRRAGVKFVVAPYEADAQLAYMMRVGIIDAVISEDSDCLAYGCAKVLFKLNNEGSGQEIQLRNLPANEGLDLTGWKNSMFLDWCCLTGCDYL-QPVRGLGIATAHKLVSRHRTMDKILAALES-KWDLPPDFSRNYKMARLTFRHQIVYDP 694
YV FCMKRV +L H+G+ P MVFDGASLP K+ N ERR R++ R KG AA+AAGE AA +HF+K V VTH MA LMK LR+AGV+ VVAPYEADAQLA++ R G +D V+SEDSDCL YGC KVLFK++NEG GQEIQLRNL AN L L+ WKNSMFLD C L GCDY+ V+GLGIATA+KLV RHR++DKI+ A+ S ++ +P + YK ARLTFRH I+Y+P
Sbjct: 55 YVAFCMKRVNLLLHHGIQPVMVFDGASLPIKRSINLERRRQRETARSKGEAALAAGEAGAAAQHFSKAVGVTHDMAFLLMKALRQAGVELVVAPYEADAQLAFLSRTGAVDVVLSEDSDCLPYGCKKVLFKMDNEGHGQEIQLRNLAANTPLSLSNWKNSMFLDLCLLVGCDYIPSSVKGLGIATAYKLVDRHRSLDKIIGAINSSRFVIPEGYWEQYKRARLTFRHHIIYNP 287
BLAST of mRNA_S-ischiensis_contig9.20818.1 vs. uniprot
Match: W7TNX5_9STRA (Exonuclease 1 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TNX5_9STRA) HSP 1 Score: 272 bits (695), Expect = 3.580e-86 Identity = 143/283 (50.53%), Postives = 181/283 (63.96%), Query Frame = 2
Query: 2 YVNFCMKRVAMLKHNGVVPYMVFDGASLPAKQGKNRERRESRKSNRGKGMAAIAAGEDRAAQRHFAKGVEVTHFMAHKLMKELRRAGVKFVVAPYEADAQLAYMMRVGIIDAVISEDSDCLAYGCAKVLFKLNNEGSGQEIQLRNLPANEGLDLTGWKNSMFLDWCCLTGCDYLQPVRGLGIATAHKLVSRHRTMDKILAALES----KWDLPPDFSRNYKMARLTFRHQIVYDPARKRTTHLRPVGDAAHRMDLSFLGKDLPAEAAEGVAAGRLMPSTYEPY 838
Y+ FCM+RV +L+ NG+ P+MVFDGAS+PAK+ + RR +R R K +A G+ A+ F K V +TH MA++L+K L+ A V+++VAPYEADAQLAY+ R G++D VISEDSD L YGC +VLFKL+ EG QEI+ RNL NE D GW +MFLD C L GCDYL + GLGI TAHKLV +HRT K+L AL + + +P D+ + ARLTFRH VYDP L P A +DL FLG E A VA GRL P T + Y
Sbjct: 55 YIRFCMERVRILQENGITPFMVFDGASIPAKRDLHLSRRAARTEARAKALAVHEEGQIGQARTLFQKAVIITHEMAYELIKCLQEANVRYMVAPYEADAQLAYLARKGVVDLVISEDSDTLPYGCPRVLFKLDKEGRAQEIERRNLALNEDYDFEGWTENMFLDMCLLAGCDYLPNLPGLGIKTAHKLVRQHRTYKKVLGALATPGGKEMAVPGDYMERFARARLTFRHHYVYDPEDGGIVPLTPFTPAHLELDLRFLGPRHAPELARAVAEGRLNPDTLQAY 337
BLAST of mRNA_S-ischiensis_contig9.20818.1 vs. uniprot
Match: A0A4D9D213_9STRA (Exonuclease 1 n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D213_9STRA) HSP 1 Score: 264 bits (674), Expect = 9.950e-78 Identity = 140/278 (50.36%), Postives = 178/278 (64.03%), Query Frame = 2
Query: 17 MKRVAMLKHNGVVPYMVFDGASLPAKQGKNRERRESRKSNRGKGMAAIAAGEDRAAQRHFAKGVEVTHFMAHKLMKELRRAGVKFVVAPYEADAQLAYMMRVGIIDAVISEDSDCLAYGCAKVLFKLNNEGSGQEIQLRNLPANEGLDLTGWKNSMFLDWCCLTGCDYLQPVRGLGIATAHKLVSRHRTMDKILAALES----KWDLPPDFSRNYKMARLTFRHQIVYDPARKRTTHLRPVGDAAHRMDLSFLGKDLPAEAAEGVAAGRLMPSTYEPY 838
M+R+ +L+ NG+ P+MVFDGAS+PAK+ + RR +R R K +A G+ A+ F K V +TH MA++L+K L+ A V+++VAPYEADAQLAY+ R G++D VISEDSD L YGC +VLFKL+ EG QEI+ RNL NE D GW +MFLD C L GCDYL + GLGI TAHKLV +HRT K+L AL + + +P D+ + ARLTFRH VYDP L P A +DLSFLG E A VA GRL P T + Y
Sbjct: 1 MERIRILQENGITPFMVFDGASIPAKRDLHLSRRAARTEARAKALAVHEEGQIGQARTLFQKAVIITHEMAYELIKCLQEANVRYMVAPYEADAQLAYLARKGVVDLVISEDSDTLPYGCPRVLFKLDKEGRAQEIERRNLALNEDYDFEGWTENMFLDMCLLAGCDYLPNLPGLGIKTAHKLVRQHRTYKKVLGALATPGGKEMAVPGDYMERFARARLTFRHHYVYDPEDGGIVPLTPFTPAHLELDLSFLGPRHAPELARAVAEGRLNPDTLQAY 278
BLAST of mRNA_S-ischiensis_contig9.20818.1 vs. uniprot
Match: A0A024UER0_9STRA (Exonuclease 1 n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UER0_9STRA) HSP 1 Score: 247 bits (631), Expect = 1.170e-74 Identity = 125/282 (44.33%), Postives = 182/282 (64.54%), Query Frame = 2
Query: 2 YVNFCMKRVAMLKHNGVVPYMVFDGASLPAKQGKNRERRESRKSNRGKGMAAIAAGEDRAAQRHFAKGVEVTHFMAHKLMKELRRAGVKFVVAPYEADAQLAYMMRVGIIDAVISEDSDCLAYGCAKVLFKLNNEGSGQEIQLRNLPANEGLDLTGWKNSMFLDWCCLTGCDYLQPVRGLGIATAHKLVSRHRTMDKILAAL--ESKWDLPPDFSRNYKMARLTFRHQIVYDPARKRTTHLRPVGDAAHRMDLSFLGKDLPAEAAEGVAAGRLMPSTYEPYP 841
Y+ + M+RV +L G++PY+VFDG LP K+ K ERR SR+ +R G+ + + + A++ F K V+V+ +MAH++++ L+ G+++VVAPYEADAQ+AY++R+GI+DAVISEDSDCL +GC VLFKL+ G+ I+ NL N GL G+ + MFLD C L+GCDY+ + GLGI +H LV R+ K++ AL E K + + + ARLTFRHQ VYDP + TH+ P+ + D FLG + E A G+A G + P + EP+P
Sbjct: 55 YIGYFMERVDLLVKCGIIPYIVFDGGYLPMKKLKEDERRTSREKHRDAGLHFLKSKKFDMARQSFVKAVDVSPYMAHRVIQRLKHKGIQYVVAPYEADAQMAYLVRMGIVDAVISEDSDCLPFGCKTVLFKLDAAGNVDVIETANLAKNSGLSFVGFTDDMFLDMCILSGCDYVASIPGLGIKKSHGLVLRYGGYQKVIRALRLEGKLSITATYETDVAQARLTFRHQRVYDPVTQTLTHVTPLPHSLDTHDTDFLGPVITNELARGIAEGDVDPISTEPFP 336
BLAST of mRNA_S-ischiensis_contig9.20818.1 vs. uniprot
Match: A0A2P6NV18_9EUKA (Exonuclease 1 n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NV18_9EUKA) HSP 1 Score: 244 bits (623), Expect = 5.560e-73 Identity = 124/285 (43.51%), Postives = 182/285 (63.86%), Query Frame = 2
Query: 2 YVNFCMKRVAMLKHNGVVPYMVFDGASLPAKQGKNRERRESRKSNRGKGMAAIAAGEDRAAQRHFAKGVEVTHFMAHKLMKELRRAGVKFVVAPYEADAQLAYMMRVGIIDAVISEDSDCLAYGCAKVLFKLNNEGSGQEIQLRNLPANEGLDLTGWKNSMFLDWCCLTGCDYLQPVRGLGIATAHKLVSRHRTMDKILAALESKWDL----PPDFSRNYKMARLTFRHQIVYDPARKRTTHLRPVGDAA--HRMDLSFLGKDLPAEAAEGVAAGRLMPSTYEPY 838
Y+ FCMKR+ ML+ NG+ P VFDGA+LP K G ++RR++R+ +R KGM I G AA+ F+K ++++ M +++ LR ++ +V+PYEADAQLAY+++ GI ISEDSD LA+GC +VLFK++N G+EI+L +LP N GL + + MF C L+GCDYL V G+GI AH LV + R++D+++ + S L P D+ ++ A LTF+HQ V+DP T L+P+ D MDLSF+G ++ E A G+A G++ P T E Y
Sbjct: 55 YIKFCMKRIEMLRQNGITPIAVFDGAALPMKSGTEKDRRQNREKHRSKGMLLIREGNAAAARESFSKAIDISPNMVCRVIDTLRSEDIQVIVSPYEADAQLAYLVQQGIAHFAISEDSDLLAFGCDRVLFKMDNYCQGKEIKLSDLPNNAGLSFVHFTHEMFRHVCILSGCDYLPSVPGMGIKKAHDLVKKFRSIDRVIGHMRSHGKLSAVVPADYEEKFRRADLTFQHQRVWDPLNGVLTRLQPLPDWLDDENMDLSFMGGEVEHEVAVGIATGKVNPRTGESY 339
BLAST of mRNA_S-ischiensis_contig9.20818.1 vs. uniprot
Match: W4H3P1_9STRA (Exonuclease 1 n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H3P1_9STRA) HSP 1 Score: 241 bits (614), Expect = 5.530e-72 Identity = 123/281 (43.77%), Postives = 179/281 (63.70%), Query Frame = 2
Query: 2 YVNFCMKRVAMLKHNGVVPYMVFDGASLPAKQGKNRERRESRKSNRGKGMAAIAAGEDRAAQRHFAKGVEVTHFMAHKLMKELRRAGVKFVVAPYEADAQLAYMMRVGIIDAVISEDSDCLAYGCAKVLFKLNNEGSGQEIQLRNLPANEGLDLTGWKNSMFLDWCCLTGCDYLQPVRGLGIATAHKLVSRHRTMDKILAAL--ESKWDLPPDFSRNYKMARLTFRHQIVYDPARKRTTHLRPVGDAAHRMDLSFLGKDLPAEAAEGVAAGRLMPSTYEPY 838
YV + M+RV +L G++PY+VFDG LP K+ K ERR SR+ +R G+A + A + A++ F K V+V+ MAH++++ L+ GVK++VAPYEADAQ+AY++R G +DAVISEDSDCL YGC VLFK++ G+ + IQ +L N L G+ + MFLD C L+GCDY+ + GLG+ +H L+ R+ + K++ AL E K + + + ARLTFRHQ VYDP + TH+ P+ + D FLG + A G+A G + P T +P+
Sbjct: 55 YVGYFMERVGLLIKCGIIPYIVFDGGYLPMKKLKEDERRLSREKHREAGLAYLKANKLDLARQSFVKAVDVSPSMAHRVIQRLQETGVKYIVAPYEADAQMAYLVRTGAVDAVISEDSDCLPYGCHHVLFKMDTPGNVEVIQAAHLALNTTLSFVGFTDDMFLDMCILSGCDYVASIPGLGVKKSHGLMLRYGSYQKVVRALRLEGKLPITKTYEADVARARLTFRHQRVYDPVSQTLTHVTPLPASLDGQDTDFLGPIISTVLARGIAEGHIDPITGKPF 335
BLAST of mRNA_S-ischiensis_contig9.20818.1 vs. uniprot
Match: A0A1V9YDM5_9STRA (Exonuclease 1 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YDM5_9STRA) HSP 1 Score: 238 bits (607), Expect = 2.220e-71 Identity = 126/297 (42.42%), Postives = 186/297 (62.63%), Query Frame = 2
Query: 2 YVNFCMKRVAMLKHNGVVPYMVFDGASLPAKQGKNRERRESRKSNRGKGMAAIAAGEDRAAQRHFAKGVEVTHFMAHKLMKELRRAGVKFVVAPYEADAQLAYMMRVGIIDAVISEDSDCLAYGCAKVLFKLNNEGSGQEIQLRNLPANEGLDLTGWKNSMFLDWCCLTGCDYLQPVRGLGIATAHKLVSRHRTMDKILAAL--ESKWDLPPDFSRNYKMARLTFRHQIVYDPARKRTTHLRPVGDAAHRMDLSFLGKDLPAEAAEGVAAGRLMPSTYEPYPDD----SPPARPARL 874
Y+N+ M+RV L G++PY+VFDG LP K+ K ERR R+ +R G+ + AA++ F K V+V+ +MAH++++ L++ V++VVAPYEADAQ+AY+ R G++DAVISEDSDCL +GC VLFK++N G EI+L +L N+ L G+ + MFLD C L+GCDY+ + GLG+ +H L+ R+ T K++ AL E K + + + ARLTFRHQ VYDP K L + + D FLG ++ + A+ +A G L P + + +P +PP RPA+L
Sbjct: 55 YINYFMERVDHLLTCGIIPYIVFDGGYLPMKKLKEEERRSGREKHRTAGLQHLENKNYEAARQCFVKAVDVSPYMAHRVIQSLKKRKVQYVVAPYEADAQMAYLARAGLVDAVISEDSDCLPFGCPTVLFKMDNTGHVDEIRLADLAKNKALSFVGFNDDMFLDMCILSGCDYVASIPGLGVKKSHGLLQRYGTWQKVVRALRLEGKLAITKSYEADVTQARLTFRHQRVYDPRTKTLVTLTEMAPTKNATD--FLGPEISNDVAQLIAEGDLDPISMDRFPTTPVKATPPPRPAKL 349
BLAST of mRNA_S-ischiensis_contig9.20818.1 vs. uniprot
Match: T0QIF5_SAPDV (Exonuclease 1 n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QIF5_SAPDV) HSP 1 Score: 233 bits (595), Expect = 7.670e-71 Identity = 128/291 (43.99%), Postives = 177/291 (60.82%), Query Frame = 2
Query: 2 YVNFCMKRVAMLKHNGVVPYMVFDGASLPAKQGKNRERRESRKSNRGKGMAAIAAGEDRAAQRHFAKGVEVTHFMAHKLMKELR--RAGVKFVVAPYEADAQLAYMMRVGIIDAVISEDSDCLAYGCAKVLFKLNNEGSGQEIQLRNLPANEGLDLTGWKNSMFLDWCCLTGCDYLQPVRGLGIATAHKLVSRHRTMDKILAALESKW-DLPPDFSRNYKMARLTFRHQIVYDPARKRTTHLRPVGD-----AAHRMDLSFLGK-DLPAEAAEGVAAGRLMPSTYEPYPDD 847
Y+++C+ R+ +L + + P VFDGA++PAK N++RR R++ R +G+ AAG + F + + VT MA KL LR V+ +VAPYEADAQLA + + ++D V SEDSDC+ YGC V FKL N G G+E + R L ANE + TGW MF+ +C L+GCDY ++G+G A AH LV+ HRT +ILAALE+ + D P F ++Y A LTFRH +V+D R++ L P+ A H LS LG+ DLP GVA G L P+T+ P P D
Sbjct: 68 YISYCLARLDLLLEHDITPTFVFDGATVPAKAATNQKRRADREAYRNQGIELHAAGNSGKSFSAFCRSLHVTRAMARKLFVTLRAKHPSVRCLVAPYEADAQLALLSKEKLVDVVFSEDSDCIPYGCKTVFFKLENTGYGEEFRRRYLGANEDITFTGWSEFMFVQFCILSGCDYCPTLKGVGPAAAHALVAAHRTPTRILAALEATYKDFSPSFRQSYLEAILTFRHHLVFDETRQKCRMLNPLSVSTEVLALHGGSLSCLGRVDLPDAVVVGVANGALNPNTHTPEPVD 358
BLAST of mRNA_S-ischiensis_contig9.20818.1 vs. uniprot
Match: A0A485L1J1_9STRA (Exonuclease 1 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L1J1_9STRA) HSP 1 Score: 235 bits (600), Expect = 1.050e-70 Identity = 122/277 (44.04%), Postives = 176/277 (63.54%), Query Frame = 2
Query: 2 YVNFCMKRVAMLKHNGVVPYMVFDGASLPAKQGKNRERRESRKSNRGKGMAAIAAGEDRAAQRHFAKGVEVTHFMAHKLMKELRRAGVKFVVAPYEADAQLAYMMRVGIIDAVISEDSDCLAYGCAKVLFKLNNEGSGQEIQLRNLPANEGLDLTGWKNSMFLDWCCLTGCDYLQPVRGLGIATAHKLVSRHRTMDKILAAL--ESKWDLPPDFSRNYKMARLTFRHQIVYDPARKRTTHLRPVGDAAHRMDLSFLGKDLPAEAAEGVAAGRLMPST 826
YV + M+RV L G+ PY+VFDG LP K+ K ERR SR+ + G+ + A A++ F K V+V+ +MAH++++ L++ GVK+VVAPYEADAQ+A+M+R G++DAVISEDSDCL YGC KVLFK++ GS + I + +L N+ L G+ + MFLD C L+GCDY+ + GLGI +H L+ R+ + K++ AL E K + + + AR TFRHQ VYDP + H+ P+ A + FLG + E A+G+A G + P T
Sbjct: 55 YVAYFMERVDFLLKCGIHPYIVFDGGFLPMKKLKEDERRASREKHHAAGVEYLKAKNLEMARQSFIKAVDVSPYMAHRVIQSLKKKGVKYVVAPYEADAQMAFMVRAGLVDAVISEDSDCLPYGCKKVLFKMDQYGSVEVIDMISLAKNKTLSFVGFTDDMFLDMCILSGCDYVASIPGLGIKKSHGLILRYGSYQKVVRALRLEGKMAIAKSYENDVAQARWTFRHQRVYDPVTQTLVHVTPLPAALIGQNTDFLGPVISNELAKGIAEGEIDPIT 331 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20818.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig9.20818.1 >prot_S-ischiensis_contig9.20818.1 ID=prot_S-ischiensis_contig9.20818.1|Name=mRNA_S-ischiensis_contig9.20818.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=319bp MKRVAMLKHNGVVPYMVFDGASLPAKQGKNRERRESRKSNRGKGMAAIAAback to top mRNA from alignment at S-ischiensis_contig9:3504493..3514855- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig9.20818.1 ID=mRNA_S-ischiensis_contig9.20818.1|Name=mRNA_S-ischiensis_contig9.20818.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=10363bp|location=Sequence derived from alignment at S-ischiensis_contig9:3504493..3514855- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig9:3504493..3514855- >mRNA_S-ischiensis_contig9.20818.1 ID=mRNA_S-ischiensis_contig9.20818.1|Name=mRNA_S-ischiensis_contig9.20818.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1914bp|location=Sequence derived from alignment at S-ischiensis_contig9:3504493..3514855- (Schizocladia ischiensis KU_0333)back to top |