prot_S-ischiensis_contig9.20741.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig9.20741.1
Unique Nameprot_S-ischiensis_contig9.20741.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length184
Homology
BLAST of mRNA_S-ischiensis_contig9.20741.1 vs. uniprot
Match: D8LSM7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSM7_ECTSI)

HSP 1 Score: 184 bits (467), Expect = 1.720e-51
Identity = 96/177 (54.24%), Postives = 124/177 (70.06%), Query Frame = 0
Query:   10 RPPPQLFHFPPAEGTDRTAAVENLEEVLPVQQRVVKYLTDDKVFGVHVLCSAYFLCSALAYTR--SRAVSAYQGALIAVMVKQWGFILGRLRSVLVPHLHYQPRRYGKFRSRVEALVRDPAVQSLVCCAVFLALPHPLGQALVPLALREAVYLLWVGKELLCIVAPGVGKALARWME 184
            RP   LF FPP     RT A + L+EVLPVQQR+VKYLT+D+VFGV +LCS YF  SA+AY    ++   +YQ AL  + +KQWG ++GR+R VLVPHL Y+P+RY K+R+RV AL  DPAVQ +V C +F+ +P  L  AL+PL L+E+VYLLWV KE L I APG+ + L    E
Sbjct:  253 RPVAPLFSFPPGPRVRRTEAEDGLQEVLPVQQRLVKYLTEDRVFGVQILCSIYFFMSAVAYLMDSTKFGGSYQAALAVLTLKQWGTVVGRVRRVLVPHLIYEPQRYVKYRARVSALALDPAVQGIVYCGIFMLMP--LSLALIPLLLKESVYLLWVMKEALQITAPGLVETLTTLSE 427          
BLAST of mRNA_S-ischiensis_contig9.20741.1 vs. uniprot
Match: A0A835YJH6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJH6_9STRA)

HSP 1 Score: 136 bits (343), Expect = 7.150e-34
Identity = 79/171 (46.20%), Postives = 103/171 (60.23%), Query Frame = 0
Query:   23 GTDRTAAVENLEEVLPVQQRVVKYLTDDKVFGVHVLCSAYFLCSALAYTRSRA-------VSAYQGALIAVMVKQWGFILGRLRSVLVPHLHYQPRRYGKFRSRVEALVRDPAVQSLVCCAVFLALPHPLGQALVPLALREAVYLLWVGKELLCIVAP----GVGKALARW 182
            G   TAA   L+  LP+QQR++KY TDDK+F V +  S YF  +A     S A         AYQGAL+A+++K W  +LGR+R  LVP L  +P ++G FR+R  AL RDPAVQ+ + CA+ L    PL  AL PLALRE  YL  V +E++ I AP     +G AL RW
Sbjct:   26 GQAHTAAEAGLDGFLPLQQRLIKYFTDDKLFTVQIAGSLYFAANAAILALSSAPDASAARARAYQGALLALIIKYWCVVLGRMRRTLVPGLAREPGKFGLFRARARALARDPAVQTSLFCALALTRQPPLSAALAPLALREGAYLFLVAREVVSIAAPRALPALG-ALVRW 195          
BLAST of mRNA_S-ischiensis_contig9.20741.1 vs. uniprot
Match: A0A836CE38_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE38_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 8.030e-14
Identity = 51/141 (36.17%), Postives = 69/141 (48.94%), Query Frame = 0
Query:   13 PQLFHFPPAEGTDRTAAVENLEEVLPVQQRVVKYLTDDKVFGVHVLCSAYFLCSALAYTRSRAVSA------YQGALIAVMVKQWGFILGRLRSVLVPHLHYQP------RRYGKFRSRVEALVRDPAVQSLVCCAVFLAL 141
            P LF+ P   G   T A   LE  LP+QQR+V+Y TDD+ F +    S +F   A     + + +A      Y+ AL  V  K    +  R+R V +P L          R Y +FR+R  AL RDPA Q+LV CA+   L
Sbjct:  113 PPLFNAPLRPGRAHTVAEAGLEGFLPLQQRLVRYFTDDRAFALQAAGSLWFAAHAALTLAAPSAAAMDPLRMYRSALAGVAAKNAALLAQRVRRVALPPLLAAEAPGGGARAYARFRARAAALARDPAAQALVYCALMATL 253          
BLAST of mRNA_S-ischiensis_contig9.20741.1 vs. uniprot
Match: A0A6H5KS72_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS72_9PHAE)

HSP 1 Score: 74.3 bits (181), Expect = 4.170e-13
Identity = 39/73 (53.42%), Postives = 50/73 (68.49%), Query Frame = 0
Query:  112 RYGKFRSRVEALVRDPAVQSLVCCAVFLALPHPLGQALVPLALREAVYLLWVGKELLCIVAPGVGKALARWME 184
            RY K+R+RV AL  DPAVQ +V C +F+ +P  L  AL+PL L+E+VYLLWV KE L I APG+ + L    E
Sbjct:   16 RYVKYRARVSALALDPAVQGIVYCGIFMLMP--LSLALIPLLLKESVYLLWVMKEALQITAPGLVETLTTLSE 86          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20741.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LSM7_ECTSI1.720e-5154.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YJH6_9STRA7.150e-3446.20Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CE38_9STRA8.030e-1436.17Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5KS72_9PHAE4.170e-1353.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 123..145
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 52..70
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 181..184
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 157..180
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 71..81
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..51
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 82..102
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 146..156
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 103..122

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig9contigS-ischiensis_contig9:2895684..2901249 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig9.20741.1mRNA_S-ischiensis_contig9.20741.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig9 2895657..2901249 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig9.20741.1 ID=prot_S-ischiensis_contig9.20741.1|Name=mRNA_S-ischiensis_contig9.20741.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=184bp
MAPGAAREGRPPPQLFHFPPAEGTDRTAAVENLEEVLPVQQRVVKYLTDD
KVFGVHVLCSAYFLCSALAYTRSRAVSAYQGALIAVMVKQWGFILGRLRS
VLVPHLHYQPRRYGKFRSRVEALVRDPAVQSLVCCAVFLALPHPLGQALV
PLALREAVYLLWVGKELLCIVAPGVGKALARWME
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