mRNA_S-ischiensis_contig9.20564.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig9.20564.1 vs. uniprot
Match: A0A6H5KKK8_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK8_9PHAE) HSP 1 Score: 142 bits (359), Expect = 8.240e-35 Identity = 96/228 (42.11%), Postives = 126/228 (55.26%), Query Frame = 1
Query: 61 YVTQEDVHAAELTPREALEFAAKLRMGRGSSRAEHTACVDAVLRRLALLPCADQRIGDALARGVSGGQRKRLSIGCGIIGLADLRLLFLDEPTTGLDSGAALRVLQTVRALARAPAGSGPGIPGPGSVGPLGGPGFSAGPAPGPGGRXXXXXXXXXPPQLVVLATVHQPSPELFALFDRVLVLAEGRQVYYGPAGAAAADYFSGPALGHLFRCPPGRNPAEFVLSVAQ 744
YVTQ+D H AELT RE+L FA +L MG G R + A V+ +L L L CAD R+G+ L RG+SGG+ +RLS+G G+ L +RLL LDEPTTGLDS +A V+ R LA + VV+A+VHQPS E+F+LFD+VLV+ GRQ ++G A + AAD S P LG + PG+N AEF+L A+
Sbjct: 266 YVTQDDFHVAELTVRESLAFAVRLSMG-GRER-DRRARVEELLDVLGLRACADVRVGNPLERGISGGEARRLSMGIGVAALESVRLLLLDEPTTGLDSSSAAEVMLLARKLAS------------------------------------------RRDRRVVVASVHQPSAEMFSLFDKVLVMVGGRQAFFGSA-SKAADILSRPELGIMPT--PGQNSAEFILLAAK 446
BLAST of mRNA_S-ischiensis_contig9.20564.1 vs. uniprot
Match: W7TLH8_9STRA (Abc transporter g family member 29 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TLH8_9STRA) HSP 1 Score: 133 bits (335), Expect = 1.230e-31 Identity = 92/230 (40.00%), Postives = 118/230 (51.30%), Query Frame = 1
Query: 61 YVTQEDVHAAELTPREALEFAAKLRMGRGSSRAEHTACVDAVLRRLALLPCADQRIGDALARGVSGGQRKRLSIGCGIIGLADLRLLFLDEPTTGLDSGAALRVLQTVRALARAPAGSGPGIPGPGSVGPLGGPGFSAGPAPGPGGRXXXXXXXXXPPQLVVLATVHQPSPELFALFDRVLVLAEGRQVYYGPAGAAAADYFSGPALGHLFRCPPGRNPAEFVLSVAQGA 750
YVTQ++VH T RE L FAA LR+ G A+ VD VL L L AD +GD+L +G+SGGQ +RL+IG II L + +FLDEPTTGLDS + V+ VR LA V T+HQPS E+FALFD+++++A+G QVY+G A A YFS PAL F G NPAEFV+S + G+
Sbjct: 737 YVTQDNVHIGCFTVRETLHFAALLRIKEGVRPAQREKMVDDVLGMLGLDSVADVMVGDSLRKGISGGQARRLTIGVEIINLPGM--IFLDEPTTGLDSNISYEVMAAVRNLANQ--------------------------------------------NRTVCCTIHQPSIEVFALFDKLILMAKGEQVYFG-ATHEAVKYFSSPALDFAFS--KGVNPAEFVMSASSGS 917
BLAST of mRNA_S-ischiensis_contig9.20564.1 vs. uniprot
Match: A0A5A7RGC2_STRAF (ABC transporter family protein n=1 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7RGC2_STRAF) HSP 1 Score: 127 bits (318), Expect = 2.840e-30 Identity = 97/252 (38.49%), Postives = 129/252 (51.19%), Query Frame = 1
Query: 1 GGVLVDGRAPSAAFLRERAAYVTQEDVHAAELTPREALEFAAKLRMGRGSSRAEHTACVDAVLRRLALLPCADQRIGDALARGVSGGQRKRLSIGCGIIGLADLRLLFLDEPTTGLDSGAALRVLQTVRALARAPAGSGPGIPGPGSVGPLGGPGFSAGPAPGPGGRXXXXXXXXXPPQLVVLATVHQPSPELFALFDRVLVLAEGRQVYYGPAGAAAADYFSGPALGHLFRCPPGRNPAEFVLSVAQGAEP 756
G V +GR P + +R R +V+Q+DV LT E L F A LR+ + S A D V+ L L C + IG L RG+SGG+RKR+SIG + L D LL LDEPT+GLDS A R+L TV+ LA GGR V+ T+HQPS L+ +FD++++L+EGR +YYG A AAA DYFS ++G F NPA+F+L +A G P
Sbjct: 102 GKVTYNGR-PFSGPIRRRTGFVSQDDVLYPHLTVFETLLFTALLRLPQSLSPAHKAHQADRVVAELGLARCRNSIIGGPLLRGISGGERKRVSIGQEL--LIDPSLLLLDEPTSGLDSTTAHRILATVKGLAA-------------------------------GGR-------------TVITTIHQPSSRLYHMFDKLVLLSEGRPIYYG-AAAAALDYFS--SVG--FSVSVAVNPADFLLDLANGIGP 301
BLAST of mRNA_S-ischiensis_contig9.20564.1 vs. uniprot
Match: A0A7J6NSQ2_PEROL (ABC transporter domain-containing protein n=2 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6NSQ2_PEROL) HSP 1 Score: 123 bits (309), Expect = 8.370e-30 Identity = 87/250 (34.80%), Postives = 121/250 (48.40%), Query Frame = 1
Query: 1 GGVLVDGRAPSAAFLRERAAYVTQEDVHAAELTPREALEFAAKLRMGRGSSRAEHTACVDAVLRRLALLPCADQRIGDALARGVSGGQRKRLSIGCGIIGLADLRLLFLDEPTTGLDSGAALRVLQTVRALARAPAGSGPGIPGPGSVGPLGGPGFSAGPAPGPGGRXXXXXXXXXPPQLVVLATVHQPSPELFALFDRVLVLAEGRQVYYGPAGAAAADYFSGPALGHLFRCPPGRNPAEFVLSVAQGA 750
G V +G+ R AYV Q+D A TPRE LE +A+LRM E A V +L L L PC D +G+ + +G+SGG+RKR S+G +I + +++FLDEP +GLDS AA+ ++ ++ LAR+ + V+ TVHQPS E+F++FD LV+ G VY GP D+F A +CPP NPA+FVLS Q A
Sbjct: 101 GEVSFNGKVQDPVNFRSHIAYVMQDDHLTATATPREVLEMSARLRM-HDQDEKEIQALVTDLLDSLKLTPCKDTVVGNGVIKGISGGERKRTSVGMELI--SKPQMIFLDEPLSGLDSYAAVTTMKVLKELARS--------------------------------------------GVAVMVTVHQPSSEIFSMFDNTLVICSGMMVYQGPT-TDLKDFFQDNAS---IKCPPDYNPADFVLSELQTA 299
BLAST of mRNA_S-ischiensis_contig9.20564.1 vs. uniprot
Match: A0A1X6N8G3_9APHY (Uncharacterized protein n=2 Tax=Postia placenta TaxID=104341 RepID=A0A1X6N8G3_9APHY) HSP 1 Score: 128 bits (321), Expect = 8.450e-30 Identity = 88/237 (37.13%), Postives = 124/237 (52.32%), Query Frame = 1
Query: 52 RAAYVTQEDVHAAELTPREALEFAAKLRMGRGSSRAEHTACVDAVLRRLALLPCADQRIGDALARGVSGGQRKRLSIGCGIIGLADLRLLFLDEPTTGLDSGAALRVLQTVRALARAPAGSGPGIPGPGSVGPLGGPGFSAGPAPGPGGRXXXXXXXXXPPQLVVLATVHQPSPELFALFDRVLVLAEGRQVYYGPAGAAAADYFSGPALGHLFRCPPGRNPAEFVLSVAQGAEPPL 762
R +V Q+D+ L+ REAL FAA+LR+ AE A VDAV+ +L L D IGD RG+SGG+ +R+SIG ++ D+ L LDEPT+GLDS +A +V + + ALA P V+A++HQPS +LF FDR+L+LA GR +YYG G A A++FSG + + P G N A+++L VA ++PPL
Sbjct: 445 RVGFVPQQDILPHTLSVREALLFAAELRLPESIPHAEKLARVDAVIDQLGLSHIRDMHIGDGEKRGISGGEMRRVSIGLELVARPDI--LILDEPTSGLDSVSAKKVTEVLAALAHDPQNP-----------------------------------------TAVIASIHQPSSQLFQTFDRILLLAHGRALYYGKGGLAPAEHFSGQGIPY----PNGYNVADYLLDVA--SDPPL 632
BLAST of mRNA_S-ischiensis_contig9.20564.1 vs. uniprot
Match: A0A2K3CSN3_CHLRE (ABC transporter domain-containing protein n=5 Tax=Chlamydomonas TaxID=3052 RepID=A0A2K3CSN3_CHLRE) HSP 1 Score: 126 bits (316), Expect = 2.670e-29 Identity = 94/256 (36.72%), Postives = 125/256 (48.83%), Query Frame = 1
Query: 1 GGVLVDGRAPSAAFLRERAAYVTQEDVHAAELTPREALEFAAKLRMGRGSSRAEHTACVDAVLRRLALLPCADQRIGDALARGVSGGQRKRLSIGCGIIGLADLRLLFLDEPTTGLDSGAALRVLQTVRALARAPAGSGPGIPGPGSVGPLGGPGFSAGPAPGPGGRXXXXXXXXXPPQLVVLATVHQPSPELFALFDRVLVLAEGRQVYYGPAGAAAADYFSGPALGHLFR-----CPPGRNPAEFVLSVAQGAE 753
G + G PSAA+ R+ YV Q D LT RE L + A+L+ G A+ A VD +L LAL CA RIG ARG+SGGQ KR +I +I D R+LFLDEPTTGLDS A V+ TV+ALAR GG + V+AT+H P+ F+LFD+++++A GR VY+G A+A YF L + PG N AEF++ + A+
Sbjct: 103 GELRFSGVRPSAAYQRKHTGYVEQFDTLLPILTVREMLLYTAELKRPLGEPLADKKAAVDQLLDALALTRCAGVRIGSPEARGISGGQAKRTNIAIALI--TDPRVLFLDEPTTGLDSYTANEVMLTVQALAR-------------------------------GG-------------VTVVATIHSPTAFCFSLFDKLMMMASGRTVYFGAQDASAVSYFQRTCTSVLGQDVEALAGPGSNSAEFLVDIITEAD 312
BLAST of mRNA_S-ischiensis_contig9.20564.1 vs. uniprot
Match: A0A7S4DHM8_9EUKA (Hypothetical protein n=2 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DHM8_9EUKA) HSP 1 Score: 123 bits (309), Expect = 2.820e-29 Identity = 86/251 (34.26%), Postives = 125/251 (49.80%), Query Frame = 1
Query: 1 GGVLVDGRAPSAAFLRERAAYVTQEDVHAAELTPREALEFAAKLRMGRGSSRAEHTACVDAVLRRLALLPCADQRIGDALARGVSGGQRKRLSIGCGIIGLADLRLLFLDEPTTGLDSGAALRVLQTVRALARAPAGSGPGIPGPGSVGPLGGPGFSAGPAPGPGGRXXXXXXXXXPPQLVVLATVHQPSPELFALFDRVLVLAEGRQVYYGPAGAAAADYFSGPALGHLFRCPPGRNPAEFVLSVAQGAE 753
G VL +G+A + A + AYV QE+ A TPREAL F+A +R+ + +S E V+ +L L L CAD IG L +G+SGG++KR SIG +I +++FLDEPT+GLD+ +A + ++ L + G S V+ T+HQPS E+F LFD+ L++ G VY+G A YF +LG + CPP NPA+ V+ + Q E
Sbjct: 117 GSVLANGQAVNPAKFAKNIAYVMQEEALFATATPREALHFSAAMRLPQNTSIEERNELVEGLLMDLDLTKCADTLIGSVLIQGISGGEKKRTSIGVELI--TQPKIIFLDEPTSGLDTYSAFNACEILKKLCKR--------------------GCS------------------------VVCTIHQPSSEIFHLFDKTLLIQSGYIVYHGAVNDMPA-YFD--SLGEKYACPPNYNPADHVMFLMQAKE 318
BLAST of mRNA_S-ischiensis_contig9.20564.1 vs. uniprot
Match: A0A833VF75_9POAL (ABC transporter G family member 11-like protein n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833VF75_9POAL) HSP 1 Score: 125 bits (315), Expect = 4.290e-29 Identity = 93/244 (38.11%), Postives = 126/244 (51.64%), Query Frame = 1
Query: 1 GGVLVDGRAPSAAFLRERAAYVTQEDVHAAELTPREALEFAAKLRMGRGSSRAEHTACVDAVLRRLALLPCADQRIGDALARGVSGGQRKRLSIGCGIIGLADLRLLFLDEPTTGLDSGAALRVLQTVRALARAPAGSGPGIPGPGSVGPLGGPGFSAGPAPGPGGRXXXXXXXXXPPQLVVLATVHQPSPELFALFDRVLVLAEGRQVYYGPAGAAAADYFSGPALGHLFRCPPGRNPAEFVL 732
G VL++GR +F AAYVTQ+D LT RE + ++A+LR+ S E A V+ + + L CAD IG+ RGVSGG+++R+SI I L RLLFLDEPT+GLDS +A V QT+RALAR GR V+A+VHQPS E+F LFD + +L+ G+ VY+G A + A ++F F CPP RNP++ L
Sbjct: 102 GSVLLNGRKTKLSF--GTAAYVTQDDTLIGTLTVREMISYSARLRLSNKMSCEEKRALVEGTISEMGLQDCADTMIGNWHLRGVSGGEKRRVSIALEI--LMRPRLLFLDEPTSGLDSASAFFVTQTLRALAR-------------------------------DGR-------------TVIASVHQPSSEVFELFDHLYLLSGGKSVYFGQA-SEACEFFDQAG----FPCPPLRNPSDHFL 292
BLAST of mRNA_S-ischiensis_contig9.20564.1 vs. uniprot
Match: A0A7J6R577_PEROL (Nitric oxide associated protein 1 n=2 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6R577_PEROL) HSP 1 Score: 126 bits (316), Expect = 4.460e-29 Identity = 92/254 (36.22%), Postives = 128/254 (50.39%), Query Frame = 1
Query: 1 GGVLVDGRAPSAAFLRERAAYVTQEDVHAAELTPREALEFAAKLRMGRGSSRAEHTACVDAVLRRLALLPCADQRIGDALARGVSGGQRKRLSIGCGIIGLADLRLLFLDEPTTGLDSGAALRVLQTVRALARAPAGSGPGIPGPGSVGPLGGPGFSAGPAPGPGGRXXXXXXXXXPPQLVVLATVHQPSPELFALFDRVLVLAEGRQVYYGPAGAAAADYFSGPALGHL-FRCPPGRNPAEFVLSVAQGAEPP 759
G V++DG+ + + RE AYV QED + TPRE LEF+A L++ +G + E VD +L L L C + +G+ L RG+SGG+RKR SIG +I ++FLDEP TGLDS AA+ + +R LA+ + VL TVHQPS E+F LFDRV+++ EG+ Y+GP A+ +D+F + H CPP N +F L Q EPP
Sbjct: 1694 GVVMLDGQPMAPSKFRESIAYVMQEDALVSTSTPREILEFSATLKLNKG--KREIKTIVDDMLEYLRLSSCQNTMVGNQLTRGISGGERKRTSIGVELI--TQPSMIFLDEPLTGLDSYAAVTTSRVLRGLAKR--------------------------------------------GVTVLMTVHQPSSEVFELFDRVMIINEGQIAYHGPR-ASLSDFF----VKHAGLNCPPHHNFGDFALYTLQ-TEPP 1893
BLAST of mRNA_S-ischiensis_contig9.20564.1 vs. uniprot
Match: A0A7J6S7V5_PEROL (ABC transporter domain-containing protein (Fragment) n=4 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6S7V5_PEROL) HSP 1 Score: 125 bits (313), Expect = 4.490e-29 Identity = 88/250 (35.20%), Postives = 122/250 (48.80%), Query Frame = 1
Query: 1 GGVLVDGRAPSAAFLRERAAYVTQEDVHAAELTPREALEFAAKLRMGRGSSRAEHTACVDAVLRRLALLPCADQRIGDALARGVSGGQRKRLSIGCGIIGLADLRLLFLDEPTTGLDSGAALRVLQTVRALARAPAGSGPGIPGPGSVGPLGGPGFSAGPAPGPGGRXXXXXXXXXPPQLVVLATVHQPSPELFALFDRVLVLAEGRQVYYGPAGAAAADYFSGPALGHLFRCPPGRNPAEFVLSVAQGA 750
G V +G+ R AYV Q+D A TPRE LE +A+LRM E A V +L L L PC D +G+ + +G+SGG+RKR S+G +I + +++FLDEP +GLDS AA+ ++ ++ LAR+ + V+ TVHQPS E+F++FD LV+ G VY GP A D+F A +CPP NPA+FVLS Q A
Sbjct: 101 GEVSFNGKVQDPVNFRSHIAYVMQDDHLTATATPREVLEMSARLRM-HDQDEKEIQALVTDLLDSLKLTPCKDTVVGNGVIKGISGGERKRTSVGMELI--SKPQMIFLDEPLSGLDSYAAVTTMKVLKELARS--------------------------------------------GVAVMVTVHQPSSEIFSMFDNTLVICSGMMVYQGPT-ADLKDFFQDNAS---IKCPPDYNPADFVLSELQTA 299 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20564.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig9.20564.1 >prot_S-ischiensis_contig9.20564.1 ID=prot_S-ischiensis_contig9.20564.1|Name=mRNA_S-ischiensis_contig9.20564.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=266bp GGVLVDGRAPSAAFLRERAAYVTQEDVHAAELTPREALEFAAKLRMGRGSback to top mRNA from alignment at S-ischiensis_contig9:1428191..1432838- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig9.20564.1 ID=mRNA_S-ischiensis_contig9.20564.1|Name=mRNA_S-ischiensis_contig9.20564.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=4648bp|location=Sequence derived from alignment at S-ischiensis_contig9:1428191..1432838- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig9:1428191..1432838- >mRNA_S-ischiensis_contig9.20564.1 ID=mRNA_S-ischiensis_contig9.20564.1|Name=mRNA_S-ischiensis_contig9.20564.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1596bp|location=Sequence derived from alignment at S-ischiensis_contig9:1428191..1432838- (Schizocladia ischiensis KU_0333)back to top |