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Homology
BLAST of mRNA_S-ischiensis_contig9.20505.1 vs. uniprot
Match: D8LSJ6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSJ6_ECTSI) HSP 1 Score: 226 bits (577), Expect = 1.820e-64 Identity = 122/223 (54.71%), Postives = 156/223 (69.96%), Query Frame = 1
Query: 46 ERADPAQDNLFRVFLVFQEMKSAGVRPDLRAYNALINSCAAVGDLARAMSVVEEMA--GDEAGVEPDVITHTSLIKAAANARPPKVAEAEEIFAAMQQRTNHFATFQAPTERTYSHVMAANLRAGRPERALDLWTEMLHVGGPDGEGLAPGHRSSTVAIHACQDLGDLSAALEVYSAMQTAGVRLDNRSLLALVRLCEAEGHHDIASRIRRERSALPPPTTSR 708
+ A+PA DNLFRVFLVFQEM+S GVRPDLRAYNAL+N+CA +G+ RA+ VV M G+ G++PD +T+TSLIKAAA A PP+V EAEEIFA MQQRTNHF+TF PTE TY+H+M A++ A RAL++W + L G +APG RS+ A+ AC GD+ AL+VY M+ G+R ++R+LL LV LC A G +A+RI RERS T R
Sbjct: 866 DNANPALDNLFRVFLVFQEMRSRGVRPDLRAYNALVNTCADLGEFDRALGVVRLMVDDGEGGGLQPDAVTYTSLIKAAARAVPPRVEEAEEIFATMQQRTNHFSTFARPTEVTYAHLMRASVMAEDYGRALEIWRQQLSAG------VAPGPRSTRAALAACGGAGDVDTALQVYDVMREGGIRPNSRALLDLVNLCRANGLQSVAARIMRERSKTDATTNRR 1082
BLAST of mRNA_S-ischiensis_contig9.20505.1 vs. uniprot
Match: A0A836CEM1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEM1_9STRA) HSP 1 Score: 222 bits (566), Expect = 1.080e-63 Identity = 126/217 (58.06%), Postives = 151/217 (69.59%), Query Frame = 1
Query: 55 DPAQDNLFRVFLVFQEMKSAGVRPDLRAYNALINSCAAVGDLARAMSVVEEMAGDEAGVEPDVITHTSLIKAAANARPPKVAEAEEIFAAMQQRTNHFATFQAPTERTYSHVMAANLRAGRPERALDLWTEMLHVGGPDGEGLAPGHRSSTVAIHACQDLGDLSAALEVYSAMQTAGVRLDNRSLLALVRLCEAEGHHDIASRIRRERSALPPPTTS 705
DPA DNLFRVFLVF EMKS GV+PD AYNALINSCAAVGDL RAM+V+ +M DE + PD IT TSLIK AA A AE EIFAAMQQRTNHF+TF P+ERT+ H++ AN+ R R +LW +ML EGLAP R+ ++ + AC+ GDL+ AL VY M TAG+R DNRSLL+LVRLCE+ G D A I R+RS+L +S
Sbjct: 654 DPAADNLFRVFLVFGEMKSQGVQPDRPAYNALINSCAAVGDLERAMAVLRQMYEDEHCLPPDAITFTSLIKTAAAAHNADAAE--EIFAAMQQRTNHFSTFHRPSERTFRHMITANMNIKRFSRVQELWAQML------AEGLAPSSRTCSLVLGACRHQGDLTQALSVYGVMNTAGIRPDNRSLLSLVRLCESAGMADKARDIIRDRSSLEHKNSS 862
BLAST of mRNA_S-ischiensis_contig9.20505.1 vs. uniprot
Match: A0A0G4F8K7_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4F8K7_VITBC) HSP 1 Score: 120 bits (302), Expect = 1.500e-27 Identity = 76/208 (36.54%), Postives = 109/208 (52.40%), Query Frame = 1
Query: 64 QDNLFRVFLVFQEMKSAGVRPDLRAYNALINSCAAVGDLARAMSVVEEMAGDEAGVEPDVITHTSLIKAAANARPPKVAEAEEIFAAMQQRTNHFATFQAPTERTYSHVMAANLRAGRPERALDLWTEMLHVGGPDGEGLAPGHRSSTVAIHACQDLGDLSAALEVYSAMQTAGVRLDNRSLLALVRLCEAEGHHDIASRIRRERSAL 687
++NLFR+FLVFQEM+S+GV+PDL AYN L+++C G++ +AM V AMQQRTNHFA+ P+E T+ +M AN A R R +L+ M G+ P R+ +AI ++ + AL++Y + VRLDNRSL AL+ L +G HD+ASRIR++RS +
Sbjct: 641 RENLFRIFLVFQEMQSSGVQPDLCAYNTLLDACGRAGEVEKAMEVXXXXXXXXXXXXXXXXXXXXXXXX----XXXXXXXXXXXXTAMQQRTNHFASCVLPSELTFKQLMLANRNAYRLRRVFELFDMMQRQ-----HGIRPTLRTGAIAIQLACEVKQVERALDIYRTLTANRVRLDNRSLHALLSLLNEKGLHDMASRIRQQRSLM 839
BLAST of mRNA_S-ischiensis_contig9.20505.1 vs. uniprot
Match: A0A7S4F7G9_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F7G9_CHRCT) HSP 1 Score: 98.6 bits (244), Expect = 3.180e-22 Identity = 57/133 (42.86%), Postives = 76/133 (57.14%), Query Frame = 1
Query: 295 VAEAEEIFAAMQQRTNHFATFQAPTERTYSHVMAANLRAGRPERALDLWTEMLHVGGPDGEGLAPGHRSSTVAIHACQDLGD----LSAALEVYSAMQTAGVRLDNRSLLALVRLCEAEGHHDIASRIRRERS 681
VA+AE I+ M QRTNHF T+ P+ Y+H+M AN +A R L+L EM GL+P + A+ AC+ L+ L +Y M + VRLDN+ +LAL RLCEA+G H A RIR+ERS
Sbjct: 7 VAQAERIWLEMGQRTNHFTTYTPPSTHCYAHLMTANRKASNITRVLELLDEM------QARGLSPTAAHFSTALQACEAFSHVPRALTLGLALYDKMVSRAVRLDNKGMLALTRLCEAQGEHQTARRIRQERS 133
BLAST of mRNA_S-ischiensis_contig9.20505.1 vs. uniprot
Match: A0A7S0XEC2_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XEC2_9STRA) HSP 1 Score: 101 bits (251), Expect = 2.580e-21 Identity = 57/112 (50.89%), Postives = 77/112 (68.75%), Query Frame = 1
Query: 64 QDNLFRVFLVFQEMK-SAGVRPDLRAYNALINSCAAVGDLARAMSVVEEMAGDEAGVEPDVITHTSLIKAAA-NARPPKVAEAEEIFAAMQQRTNHFATFQAPTERTYSHVM 393
+D+LFR++LVFQEMK + ++ D YN LIN+CA VGD+ RA+ + M E G+EP+VIT+TSLIKA A N+R + AE IF MQQR+NHF+ + P E TY +M
Sbjct: 172 RDDLFRLYLVFQEMKYNPAIQLDTAVYNTLINACAGVGDIDRALETMTAM--QENGIEPNVITYTSLIKACAFNSRNEMIELAENIFNEMQQRSNHFSNYIQPNEMTYEKLM 281
BLAST of mRNA_S-ischiensis_contig9.20505.1 vs. uniprot
Match: A0A7S0Q6N5_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q6N5_9EUKA) HSP 1 Score: 77.8 bits (190), Expect = 1.790e-14 Identity = 50/137 (36.50%), Postives = 77/137 (56.20%), Query Frame = 1
Query: 223 AGVEPDVITHTSLIKAAANARPPKVAEAEEIFAAMQQRTNHFATFQAPTERTYSHVMAANLRAGRPERALDLWTEMLHVGGPDGEGLAPGHRSSTVAIHACQDLGDL----SAALEVYSAMQTAGVRLDNRSLLALV 621
AG+ PDVI+++SL+KA A A + AE I+ M QRTNHF+++ P+ TY H+M+A R G R L+L +++ LAP ++A+ + L AL++Y M+ G+R+DNR LL L+
Sbjct: 9 AGLRPDVISYSSLLKACAVAGDVECAE--RIWVEMGQRTNHFSSYVPPSSYTYYHLMSAQRRVGNASRELELLEQLVE------RRLAPTTGHYSLALQSLSRYSQLPLSLDRALQLYEDMRVRGLRMDNRGLLPLL 137
BLAST of mRNA_S-ischiensis_contig9.20505.1 vs. uniprot
Match: A0A7S0HTE0_9EUKA (Hypothetical protein (Fragment) n=2 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HTE0_9EUKA) HSP 1 Score: 78.2 bits (191), Expect = 6.880e-13 Identity = 44/86 (51.16%), Postives = 54/86 (62.79%), Query Frame = 1
Query: 223 AGVEPDVITHTSLIKAAANARPPKVAEAEEIFAAMQQRTNHFATFQAPTERTYSHVMAANLRAGRPERALDLWTEMLHVGGPDGEG 480
AG+ PDVI++TSLIKA A A A+EIF MQQRTNH +TF P+ERT+ H+MA +L A R L L E+ V D EG
Sbjct: 11 AGLTPDVISYTSLIKACAATGGEGAARADEIFNEMQQRTNHVSTFTPPSERTFRHLMAVHLAANSTGRVLALLGELRAVDDADAEG 96
BLAST of mRNA_S-ischiensis_contig9.20505.1 vs. uniprot
Match: A0A8J9SCF5_PHATR (Hypothetical protein n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9SCF5_PHATR) HSP 1 Score: 62.8 bits (151), Expect = 5.220e-8 Identity = 39/116 (33.62%), Postives = 67/116 (57.76%), Query Frame = 1
Query: 73 LFRVFLVFQEMKSAGVRPDLRAYNALINSCAAVGDLARAMSVVEEMAGDEAGVEPDVITHTSLIKAAANARPPKVAEA----EEIFAAMQQRTNHFATFQAPTERTYSHVMAANLR 408
L +VFLVFQEMK+AG PD+ YNAL+ +CA GD RA V+ +M + + P+ + L++AAA +AE+ ++ ++ T+ T PT ++++ ++A+ +R
Sbjct: 51 LLKVFLVFQEMKTAGAEPDVACYNALLRACARAGDFVRAQDVLAQMQATD--LSPNDNSWRELLRAAAKIGRSDLAESIWRQALVYGNRRRYTDDPETKWMPTLKSFAALVASYMR 164
BLAST of mRNA_S-ischiensis_contig9.20505.1 vs. uniprot
Match: B7G7P3_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G7P3_PHATC) HSP 1 Score: 63.2 bits (152), Expect = 7.400e-8 Identity = 39/116 (33.62%), Postives = 67/116 (57.76%), Query Frame = 1
Query: 73 LFRVFLVFQEMKSAGVRPDLRAYNALINSCAAVGDLARAMSVVEEMAGDEAGVEPDVITHTSLIKAAANARPPKVAEA----EEIFAAMQQRTNHFATFQAPTERTYSHVMAANLR 408
L +VFLVFQEMK+AG PD+ YNAL+ +CA GD RA V+ +M + + P+ + L++AAA +AE+ ++ ++ T+ T PT ++++ ++A+ +R
Sbjct: 258 LLKVFLVFQEMKTAGAEPDVACYNALLRACARAGDFVRAQDVLAQMQATD--LSPNDNSWRELLRAAAKIGRSDLAESIWRQALVYGNRRRYTDEPETKWMPTLKSFAALVASYMR 371
BLAST of mRNA_S-ischiensis_contig9.20505.1 vs. uniprot
Match: A0A1Z5J6M2_FISSO (PPR_long domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J6M2_FISSO) HSP 1 Score: 59.7 bits (143), Expect = 1.280e-6 Identity = 34/70 (48.57%), Postives = 45/70 (64.29%), Query Frame = 1
Query: 67 DNLFRVFLVFQEMKSAGVRPDLRAYNALINSCAAVGDLARAMSVVEEMAGDEAGVEPDVITHTSLIKAAA 276
D L +VFLVFQEMK+AG PDL YNAL+ +CA GDL A V+ +M A + P+ + L++AAA
Sbjct: 558 DVLVKVFLVFQEMKTAGTMPDLACYNALLRACARAGDLDHANDVLRQMVA--ADLCPNDTSWRQLLQAAA 625
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 228.8 |
| Seed ortholog evalue | 2.8e-57 |
| Seed eggNOG ortholog | 2880.D8LSJ6 |
| GOs | GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004518,GO:0004519,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0097159,GO:1901360,GO:1901363 |
| EggNOG free text desc. | endonuclease activity |
| EggNOG OGs | KOG4197@1,KOG4197@2759 |
| COG Functional cat. | S |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | Pentatricopeptide repeat |
| Ec32 ortholog | Ec-09_001880.1 |
| Exons | 6 |
| Model size | 735 |
| Cds size | 735 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817381.601631-CDS-S-ischiensis_contig9:848477..848576 | 1622817381.601631-CDS-S-ischiensis_contig9:848477..848576 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig9 848478..848576 + |
| 1695741070.68055-CDS-S-ischiensis_contig9:848477..848576 | 1695741070.68055-CDS-S-ischiensis_contig9:848477..848576 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig9 848478..848576 + |
| 1622817381.6126401-CDS-S-ischiensis_contig9:850296..850401 | 1622817381.6126401-CDS-S-ischiensis_contig9:850296..850401 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig9 850297..850401 + |
| 1695741070.6920714-CDS-S-ischiensis_contig9:850296..850401 | 1695741070.6920714-CDS-S-ischiensis_contig9:850296..850401 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig9 850297..850401 + |
| 1622817381.6229749-CDS-S-ischiensis_contig9:851981..852089 | 1622817381.6229749-CDS-S-ischiensis_contig9:851981..852089 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig9 851982..852089 + |
| 1695741070.7017767-CDS-S-ischiensis_contig9:851981..852089 | 1695741070.7017767-CDS-S-ischiensis_contig9:851981..852089 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig9 851982..852089 + |
| 1622817381.6333988-CDS-S-ischiensis_contig9:853343..853403 | 1622817381.6333988-CDS-S-ischiensis_contig9:853343..853403 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig9 853344..853403 + |
| 1695741070.7138822-CDS-S-ischiensis_contig9:853343..853403 | 1695741070.7138822-CDS-S-ischiensis_contig9:853343..853403 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig9 853344..853403 + |
| 1622817381.6440167-CDS-S-ischiensis_contig9:854131..854317 | 1622817381.6440167-CDS-S-ischiensis_contig9:854131..854317 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig9 854132..854317 + |
| 1695741070.7255049-CDS-S-ischiensis_contig9:854131..854317 | 1695741070.7255049-CDS-S-ischiensis_contig9:854131..854317 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig9 854132..854317 + |
| 1622817381.65449-CDS-S-ischiensis_contig9:855320..855497 | 1622817381.65449-CDS-S-ischiensis_contig9:855320..855497 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig9 855321..855497 + |
| 1695741070.7353017-CDS-S-ischiensis_contig9:855320..855497 | 1695741070.7353017-CDS-S-ischiensis_contig9:855320..855497 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig9 855321..855497 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig9.20505.1 >prot_S-ischiensis_contig9.20505.1 ID=prot_S-ischiensis_contig9.20505.1|Name=mRNA_S-ischiensis_contig9.20505.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=245bp
QALSSAGEGAGAAAAERADPAQDNLFRVFLVFQEMKSAGVRPDLRAYNAL
INSCAAVGDLARAMSVVEEMAGDEAGVEPDVITHTSLIKAAANARPPKVA
EAEEIFAAMQQRTNHFATFQAPTERTYSHVMAANLRAGRPERALDLWTEM
LHVGGPDGEGLAPGHRSSTVAIHACQDLGDLSAALEVYSAMQTAGVRLDN
RSLLALVRLCEAEGHHDIASRIRRERSALPPPTTSRTKAADIHFG back to topmRNA from alignment at S-ischiensis_contig9:848478..855497+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig9.20505.1 ID=mRNA_S-ischiensis_contig9.20505.1|Name=mRNA_S-ischiensis_contig9.20505.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=7020bp|location=Sequence derived from alignment at S-ischiensis_contig9:848478..855497+ (Schizocladia ischiensis KU_0333)
CAGGCGTTATCATCGGCGGGTGAAGGAGCGGGGGCGGCGGCGGCGGAGAG
GGCGGACCCGGCGCAGGACAACTTGTTCCGTGTGTTTTTGGTGTTCCAGG
TGAGCAAAGACGAGGATGGTTCGGGTCAGGGCATGCACTGACATGAGAAA
CCTCTTCCGAACGTGAGTACACAGGTGGGTTGTTGGGTTTTTGACGGCGC
CTGGAAGGGGTGCCCTCGATGATGATGGCGGAGGAGGAGCGGTACTTGTT
CCGGGTGTTTTTGGTGTTGTTGGGTTTTGATGCCGCAGGGTCAGCGTTGT
CGTCAATGATGGTGGAGGAGGAGCGGTACTCGTTCCGGGTGTTTTTGGTG
TTCCAGGTGGGTTGGGGTTTTCGCGCGGCCCGGAAGGGGTCTCCTCGACG
ACGGTGGAGGAGGAGTGGTGGTGTCACTGGTGTCGGAGCACAGTGCCCTG
TAGTGCACATCACGTCTGGCGTTTCCCAGACACCCGGAAGAGCTGTGGCG
CGCGGGGGCCCGGCCGCGCCCATTGGCGGCATCGGCGCTGGGCGTGGGCA
CTGGTCCGATGTCGACAATGCTCAATCTCACACACGTGCGATTGTACCTC
GTTACTTCGAAGTATATGAATCATGCCTCACCCCCCCTTCTTGGGTCCGC
AGGGAGATTTTTGGGGCGCACCTACTGGAAGTGCAATAGACCGGCTCCTG
AGTATCATTTCTTGGGCGCGACGCGCCTTTGACTGGGCGGCTGCGACGCC
CAGCCCCCTGTATTCTTGGGCTTCGGTGTGGCCTGAAGCAGGATTTTCGT
GGGCGCCGCCACTCCCGCCCGTCGGCACCTTGCTGTGGGAAGCAGTGGTC
ACATCCCATGATCACGTCACGTCACATCACACCACATCACATCGCATCAT
CACATCAAGACATTACATCACATCACGTCGCATCCCATCATCACATCACA
TCCCATCACATCGATCCGCTTCACATCACTCCGCGTCACGTGACGGCTGC
GCTTGGATGGCCTGCGATGTCGAGCTACTCGTCAGGGTATCACATCACAT
CAAATCACTCCGCGTCACGTGATGGCTGCGCTCGGATGGCATGCAAATGT
CGAGCTACTCGAGTACTTACGTTGCTGTGCGTCAGGGTGTCACATCACAT
CACATCACATCAAATCACTCCCCGTAACGTGACGGCTGCGCTTGGATGGC
GTGCGATGTCGAGCCACTGTACGTGAGGGTGCACATGGCATCATTGCATC
ACGTGTACTCTATCTAGATTGCCCCCCACCCGCCCGACACACCTCGTCAA
CAACGGAGAGGCTGGCTGTAGCCAGCCTCCCCAACAGCAGAGGACACAGC
GCCCCGTCCCTTCGGGTCACCCCTGCGATGTGATGTGACATGATATGATG
TGATGTGATGTCAAGCTACAGCACTTTAGAGTGCACATCACGTCACATCA
CATCATTTCACATCACATCACATCCTGTAGGGTCACCCCTGTGGGACTTC
GGGGTGGTCAATGGCCATACTTACCGCTACGGCAGGCACCCCATGCGTGC
GCCCACCCCACCCCCCTCCTTGTTCTTAGTTCCTTGATGTGATAAATCCT
AATATACGAACACTCAATTTTGGCATGAAGATAAACAAGCGAGTGGGAAA
GAAGAGGTGTTCCTACTTACGCAAGTTCAGGCCCCCCCCAACACTAACAT
CTCGAATGGGACAACTACTAGTAGAATCTCACACGCGTGCAATTGTACCT
TGTTACAATTTATATCAATCACCCCCCCCCCCACCCCCCACCCCCCTGGC
ATGCGCACGCCTCGAGCAGGAGATGAAATCCGCCGGGGTCCGGCCCGACC
TGCGGGCGTACAACGCGCTGATCAACTCGTGCGCCGCCGTGGGCGACCTG
GCCCGGGCCATGTCCGTCGTGGAGGTGTGTGGTGTGTGATGTGATGTGAT
GTGCACACAACAGCACTGTGGTTTGACATCACATCACATGGCAAAAAAGC
ATCGGTGTGTGTGTGAGTGAGTGAGAGTGAGAGTGAGAGAGTGACCGTGG
GCGACCTGGCCCGGGCCATGTCCGTTGTGGAGGTGCGTTCGTTCGTTCCC
TCCGCCTGTGCCCTTGCAAGCAGCGATGGAATATCGATCAGTACATAGCT
ATCGGGCTCCCATGTCCGCCGTGGAGGTGCGTCCGTTCCCTCCCCCCGCG
CCCTCGCAAGCAGTGATGGAATATCGATCGGTAGATAGTTATCCGGCTCG
ACTGATTTTGTGGCTTTACAAAGTAACTACTTGGCGAGCTATAAGGAAGG
GCCACTGCTGAGGTCTCTAGTGACGTGGCCCGCACCTCGCCCTGTGGTGT
TCCTGACAGTACTTGGATTTAGTGTGGGTCAAATCGAGTATCGACTATCG
ATAGAAAATAGATATGTACTGACGATAAATAGGTTGATCTGCTTACATAT
TCCATCACTGCTCACAAACGCCTTCTCCGAGCCTCCGCGCCGCCCGCAGC
GGGAGGCGCGTGGGTCGCCGTCGCCGTCGCCGCTCCTCGCGAATCGCGGA
CTACTTCTCCGGGCCTCGCGTGTGATTAACCCGTCTACCCCTGGGGTCCG
TATATTCATAGGGCTTTCGTGTGCAAGTCCAATTGACCAGGGGTAAAAGG
GTTAACCCCCCCCCGTGGGGGGGGGCGGGGCGGGGCGGGTCGCTACTACT
TACCCCCGGAGCGCAAACCCGAAGTTTTGACCTAACTTTGTACGAGTAGT
ATAGCTAGCCGTCCTCAAACAGTTTGAGCCGCTGCAAGGCACGCGAGGTT
GTGTCGCGAGACAAGCCAACGAGCACGTACTTGTAATTTAAGGAACAACA
CGGGGCGAGGTGCGGGCCATGTCACTAGAGACCTCAACAATGGCCCTTCC
TTAGCTCGCCAGGGGAAAGTTGTGTGGGGAAGGGGAGGTGGACGGGGAGG
AAGAGGGGGAGGAGGAGGAGGAGGAGGGGGAGGGGGGGGGGGAAAGACGA
GGGAGAGGGATGGGACAGGGCGCGTGTGTGCACCCAGAGGGGGCGAGGCA
GGCGACTTGTAGTTCCAAACCACAGGGCCCAAAACTGGATGAGACATGGA
GAGTACAGACTTGCCAACTGTGAACCCAAACCAAACCGCCCTGCGGGTGC
TTTCGCCGCGCAGCAGTGATGGAATATCTAGGCAAATTCGACCTATTTAT
CGACAGTACTGATCTATGTATCTATCGACAGTTGATATTCAATAGTTTGA
CCCAACACTGAATCCAAGTATTCTAAGGAACAACACGGGGCGAGGTGCGG
GTCACGTCACTAATCCAAGTAGTTAGTACCGCCACCCACACAATCAGTCG
AGCCCGATAACTACCTACTGATCCATATTCCATCACTGCAGGGTCATCCG
TGTGATGTTGATGTGATGTGATGTGGTGTCAAACTACAGGAAACTAGAGT
CCACATCACATCAATCACATCATTGCTGATCGATATTCCATCGCTGCCGC
ACAGGAGATGGCAGGCGACGAGGCAGGGGTGGAGCCGGACGTGATAACGC
ATACCAGCCTCATCAAGGCCGCCGCCAACGCACGCCCCCCAAAGGTGGCC
GAGGCCGAGGAGGTGCGTTGTTTACATCTCTCAACGTTAGAGAGTTTTTT
TTTCTTCTTTTTGTAGCCTCATCAAGGCCGCGGCCAACGCATGCCCCCCC
AAGGTGGCCGAGGCCGAGGAGGTGGGCGCCCTCTGTTGTTCTCTTGTGTT
GTGTTGTTGTCTCTCCTTGTTCGAAGTATGTACTGCTGTGGTTGTGGCGG
CAGCGGCGGCAGGGGTGGCACAATACTTACAGCAGTGCAGTACTTTTACT
TCGAAGTACTTGGAAGTACATTACATAGTAGAGTACGAAGGACTTGAAGT
ATGCAGTAGCGCACGCCCCCCCAAGGTGGCCGAGGCCGAGGAGGTGAGCG
CCCTCTGTTGTTATTCTCCTGCGTTGTGTTGTCGTCTCTCCTTGATGATT
CATATGAACTGTAACGAGGGAAGTACAATCGCACGTGCGTGAAATTGAGT
GGTCTCGTGCTGGTGGCTATCGCAGTTAAGAATCGAGCGTTCTCCTGTGT
TGTGTTGTCGTCTCTCGTTGTTGTACTGCTGTGGTGGTGGTGGTGGTGGC
GGCGGCGGTGGCGGCGACGGTAGTAGTACTTACGAAGGACAATACTTAAC
AGCAGTGCTGTACTTGCACATACCAGGTACTTCTAAGTAGTGGATTAGGT
GGCAGTTGCATGTAAGTAGTAGCGCTCTACTTGGCGTGGTTGTCTAAGCA
GCGCCAAGTATTGTGGTGCGGTGGTATGAATGCCACGGTACCGACTGTAG
GCTGGTGTTCGCCGTCCCCATTTCGTACTCGAGCACGAGCACACGTCTTC
CTGTGCCCGCTCCCCGCCAGCGACGGAATATCTAAGCAAGTCAGCCTATT
TATCGGCTGCACTGATCTATATATCTATCGATAGTTGATATTCGCTAGTT
TGACACCCATTAGATCCGTTTTTGGCATGAATATAAACAGCGAGTGGGAA
AGAAGAGGTGCTCCTACTTCCGCGAGGTCGGCCCCCCCCCATCCCCGGAG
GGCCGTCTTTTCACTCGCCTTCACTCGCAGGGCATACAGATAGTAACGCC
ATCCACAAAATCAGTCGAGCCCGATAACTATTACTGATTGATATTCCATC
ACTGCTCCCCGCCGTCGCCTCGGGGCTGACATTGGCTTTTTCTGCTCCCC
CCCCCCACCCCCGGCCCTGCGCCGCCCCGCCCTGGACACTCGTGCGCCGC
GGGTTTTGATGGCGTTGGGTGGCGGTTGCGGGCCCCCGGTCGGTGGCTAT
GCTTGAGGGGGGACAGATTTTCGCAGCGATGCAGCAACGCACCAACCATT
TTGCCACCTTCCAGGCGCCGACAGAGGTGTGTTGTTTGTGTGTGTGATGT
GATGTGATGTGATGTGCACACAGAAGCACTGTAGTTTGACATCACATACA
TCACAACAAATCATCGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGT
GTGCGTGTGTGCGTGTGCGTGTGTGCGTGTGCATGTGTGCGTGTGTGATG
AGTCACGTGATGGGCAGACGAACACTCGGACGTGCTCCGTTGTTTGACAT
TACAGTACTTCGAAGTACATCGCATTGCCTCATTTGATCGGTGTATGTGT
GTGTGTGTGCGTGCGTGCATGTGTGCTTATGCGTGCGTGTGTGTTTATGT
GTGTGTGTGTGTGCGGGTGTGCGCGCGTGTGTGTGTGCGTGTTCATGAAC
CACTCACCTACTGAATTACTGTGAAGTTACGAGTACCATTTTTGAGCACT
TCAGCGTACTCAGCACTAAGCAACCTTGTGTCTCTGGTGTAAGGCTCGCC
CTTGTTGCACCGCTACTTCACGTTTGTTTGCATGCCATCAATCCCCCCAC
CTTCTCTCCCCCCAACCCCCCGCCCCTCCCTCCCCCTCCCTCTCATTCCC
CCCTCCCCCCAAGGTTGGCACTTAGAGGTTAATTAGGGCCTAATTAGTCT
TCATTTTAGGTCGAATCACCCCTAGCTGACTCTAATTGATGGCCTAAAAG
GGCACCACTTGGGGTTATCTGCCAACCCTGCCCCCCCCCCCCTCCCCGTG
GCAGAGGACATATTCCCACGTCATGGCCGCTAACCTCCGGGCCGGGCGCC
CCGAGAGGGCTCTGGACCTTTGGACAGAGATGCTTCACGTGGGAGGCCCG
GACGGAGAGGGCCTGGCCCCGGGACACAGGTCCTCCACGGTGGCCATTCA
CGCCTGCCAGGACTTGGGAGACCTGTCCGCGGCGCTGGAGGTGCGAGATG
AAAAGTGCCAAGTACTTATGTGCTCGAGCAGTGCGGGACTGAGCAACTAA
GGAATGAGTAACTTACAGTAACCCCTTTACCCTTGAACCATAGGGTTTTA
GCGTGCAAAGTCCAATTTAACGGGTCCTCCACGGTGGCCATTCGCGCCGG
CCAGGACTTGGGGACCTGTCCGCGGCACTGGAGGTGAGGGCAGCTACTAG
TAGAGATATCTCCTAGACTGAGGGCTACGAGGGGCTGTAAACAGTCTTGT
ATACGGGGACAAGAGGCCATGTGTGCCGTTTTAAACATCATGGCGGCCAC
CCCCTCCCACCCTGGCACCGCCAGGGGAGGGAGGGGTCGTGCTCCGTCTC
GACCGAGGCACGTGGTCAACGGTCTCGTGACTACGGCAAGCACCACGTGA
GTACATACCTGTATATATATATATATATATATATGGATACGGATGTTCTG
ACACGATACGCGCGTGCCAAGTAATGTGCTTGAGTAGTGCGGGACTGCGT
GAGTAGGCCGTAAGACGCGCTTTCAAGTGGTTTTGAACTACTAGTATGTA
CGTCTTTCACCCCTGGGGTCCGTATAATCGCAGGGTTTTTCAATAGTGTG
CAAGTCCAATTTACCAGGGGCAAAAGGGTCAAAGGACTGTGCTGTATACA
TAGTGGGTCATGCACACATGCACACACACACGCACGCACGCGCGCAAACT
CTCACAGGCGCACACAAGTGTACAATTGCGTGTGTGCCATCTGTCCCTCC
ATCTTGCCGGCAAGTTGTCTACTGGTACCCGTCTCTCTCTCCCTCTCTTT
CCCCCTCCCCACACACCCCCCTCCCTCTGTCTCTCTTTTTCCCTCTCCCT
CCCTCCCTCCCTCTCCCTCTCCCTCTCTCTCTCCTTCCCTCTCCCCCTCT
CTCTTACATCTGCCCACCCACCCACCCACCCACCCATCACACAGCTGTAC
CACCCAACATCACTAAATCACCCCATCTACCACGCCCTGACAGGTGTATT
CCGCCATGCAGACAGCTGGCGTGCGCCTCGACAACCGCTCCCTCCTCGCC
TTAGTCCGCCTCTGTGAGGCCGAGGGCCACCACGACATCGCAAGCCGCAT
CCGACGAGAGAGGAGCGCCCTCCCCCCCCCCACCACCTCCCGGACCAAGG
CGGCAGACATCCACTTTGGG back to topCoding sequence (CDS) from alignment at S-ischiensis_contig9:848478..855497+ >mRNA_S-ischiensis_contig9.20505.1 ID=mRNA_S-ischiensis_contig9.20505.1|Name=mRNA_S-ischiensis_contig9.20505.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1470bp|location=Sequence derived from alignment at S-ischiensis_contig9:848478..855497+ (Schizocladia ischiensis KU_0333)
CAGGCGTTATCATCGGCGGGTGAAGGAGCGGGGGCGGCGGCGGCGGAGAG
GGCGGACCCGGCGCAGGACAACTTGTTCCGTGTGTTTTTGGTGTTCCAGC
AGGCGTTATCATCGGCGGGTGAAGGAGCGGGGGCGGCGGCGGCGGAGAGG
GCGGACCCGGCGCAGGACAACTTGTTCCGTGTGTTTTTGGTGTTCCAGGA
GATGAAATCCGCCGGGGTCCGGCCCGACCTGCGGGCGTACAACGCGCTGA
TCAACTCGTGCGCCGCCGTGGGCGACCTGGCCCGGGCCATGTCCGTCGTG
GAGGAGATGAAATCCGCCGGGGTCCGGCCCGACCTGCGGGCGTACAACGC
GCTGATCAACTCGTGCGCCGCCGTGGGCGACCTGGCCCGGGCCATGTCCG
TCGTGGAGGAGATGGCAGGCGACGAGGCAGGGGTGGAGCCGGACGTGATA
ACGCATACCAGCCTCATCAAGGCCGCCGCCAACGCACGCCCCCCAAAGGT
GGCCGAGGCCGAGGAGGAGATGGCAGGCGACGAGGCAGGGGTGGAGCCGG
ACGTGATAACGCATACCAGCCTCATCAAGGCCGCCGCCAACGCACGCCCC
CCAAAGGTGGCCGAGGCCGAGGAGATTTTCGCAGCGATGCAGCAACGCAC
CAACCATTTTGCCACCTTCCAGGCGCCGACAGAGATTTTCGCAGCGATGC
AGCAACGCACCAACCATTTTGCCACCTTCCAGGCGCCGACAGAGAGGACA
TATTCCCACGTCATGGCCGCTAACCTCCGGGCCGGGCGCCCCGAGAGGGC
TCTGGACCTTTGGACAGAGATGCTTCACGTGGGAGGCCCGGACGGAGAGG
GCCTGGCCCCGGGACACAGGTCCTCCACGGTGGCCATTCACGCCTGCCAG
GACTTGGGAGACCTGTCCGCGGCGCTGGAGAGGACATATTCCCACGTCAT
GGCCGCTAACCTCCGGGCCGGGCGCCCCGAGAGGGCTCTGGACCTTTGGA
CAGAGATGCTTCACGTGGGAGGCCCGGACGGAGAGGGCCTGGCCCCGGGA
CACAGGTCCTCCACGGTGGCCATTCACGCCTGCCAGGACTTGGGAGACCT
GTCCGCGGCGCTGGAGGTGTATTCCGCCATGCAGACAGCTGGCGTGCGCC
TCGACAACCGCTCCCTCCTCGCCTTAGTCCGCCTCTGTGAGGCCGAGGGC
CACCACGACATCGCAAGCCGCATCCGACGAGAGAGGAGCGCCCTCCCCCC
CCCCACCACCTCCCGGACCAAGGCGGCAGACATCCACTTTGGGGTGTATT
CCGCCATGCAGACAGCTGGCGTGCGCCTCGACAACCGCTCCCTCCTCGCC
TTAGTCCGCCTCTGTGAGGCCGAGGGCCACCACGACATCGCAAGCCGCAT
CCGACGAGAGAGGAGCGCCCTCCCCCCCCCCACCACCTCCCGGACCAAGG
CGGCAGACATCCACTTTGGG back to top
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