prot_S-ischiensis_contig9.20439.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig9.20439.1
Unique Nameprot_S-ischiensis_contig9.20439.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length257
Homology
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BLAST of mRNA_S-ischiensis_contig9.20439.1 vs. uniprot
Match: A0A6H5JK20_9PHAE (Hist_deacetyl domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK20_9PHAE)

HSP 1 Score: 103 bits (257), Expect = 2.240e-21
Identity = 73/179 (40.78%), Postives = 108/179 (60.34%), Query Frame = 0 
Query:   31 ERLLGRLRLLLET------DPHASQGDGSYAGGGAVAEYLSLLEEAGRWVERFGRERRDRAVGRYQEEREWRLGGLKETLRRLGTRKGAILADLEKVRRVTGSKATQIQRLQGLAKEGWAESELSLSRNTLAGLESLARRERSHMARLRAREWELEALLREVEASLEDTRKDREKCLHD 203
            E L G++RLLL        D     G G       + EY+SL+E+  R VER  R++ D  + + +  +E  LG LKE LRRL +++GAI ADL+++RR   SK  +I+ L+ LA E WAE E S+ R+TL  LE++ R+E++H++R RAR  ELEA   + EA L   ++D+ + L D
Sbjct:  614 EELAGKMRLLLRAGLSWGGDAEGDCGRGVMRLEMGLEEYISLVEDVHRAVERTTRQKHDSLMQQRKNSKEDGLGKLKERLRRLESKRGAIRADLDRLRRRMVSKTDRIKTLRTLADECWAEGEPSIGRDTLDNLEAMIRKEKTHLSRFRARAKELEAHGVDTEALLAGMKEDKVRRLAD 792
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BLAST of mRNA_S-ischiensis_contig9.20439.1 vs. uniprot
Match: D8LN85_ECTSI (Histone deacetylase superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN85_ECTSI)

HSP 1 Score: 101 bits (252), Expect = 1.020e-20
Identity = 70/173 (40.46%), Postives = 105/173 (60.69%), Query Frame = 0 
Query:   31 ERLLGRLRLLLETDPHASQGDGSYAGGGAVA------EYLSLLEEAGRWVERFGRERRDRAVGRYQEEREWRLGGLKETLRRLGTRKGAILADLEKVRRVTGSKATQIQRLQGLAKEGWAESELSLSRNTLAGLESLARRERSHMARLRAREWELEALLREVEASLEDTRKDR 197
            E+L G++RLLL              GGG +       EY+SL+E+  R VER  R++ D  +   +  RE  LG LKE LRRL +++G+I ADL+++RR   SK  +I+ L+ LA E WAE E S+ R+TL  LE++ R+E++H+++ RAR  ELEA   + EA L   ++D+
Sbjct:  728 EQLAGKMRLLLRAGLSWGGNAEGDRGGGVMRLEMGLEEYISLVEDVHRAVERTTRQKHDSLMQERKNSREDGLGKLKERLRRLESKRGSIRADLDRLRRRMVSKTDRIKTLRTLADECWAEGEPSIGRDTLDNLEAMIRKEKTHLSKFRARAKELEAHGVDTEALLAGMKEDK 900
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20439.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JK20_9PHAE2.240e-2140.78Hist_deacetyl domain-containing protein n=1 Tax=Ec... [more]
D8LN85_ECTSI1.020e-2040.46Histone deacetylase superfamily n=1 Tax=Ectocarpus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig9contigS-ischiensis_contig9:435132..437544 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig9.20439.1mRNA_S-ischiensis_contig9.20439.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig9 435132..437544 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig9.20439.1 ID=prot_S-ischiensis_contig9.20439.1|Name=mRNA_S-ischiensis_contig9.20439.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=257bp
SLSSSSVYSGPAGKTVAAAAAAVQLEALHKERLLGRLRLLLETDPHASQG
DGSYAGGGAVAEYLSLLEEAGRWVERFGRERRDRAVGRYQEEREWRLGGL
KETLRRLGTRKGAILADLEKVRRVTGSKATQIQRLQGLAKEGWAESELSL
SRNTLAGLESLARRERSHMARLRAREWELEALLREVEASLEDTRKDREKC
LHDMDSTTTSSSKPRGAGGLGAAALGGGGRSHPPAEVLASVPEEEGGGEA
PRAGKGG
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