prot_S-ischiensis_contig9.20400.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig9.20400.1
Unique Nameprot_S-ischiensis_contig9.20400.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length277
Homology
BLAST of mRNA_S-ischiensis_contig9.20400.1 vs. uniprot
Match: D8LN71_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN71_ECTSI)

HSP 1 Score: 324 bits (831), Expect = 1.220e-99
Identity = 168/229 (73.36%), Postives = 181/229 (79.04%), Query Frame = 0
Query:   34 ARDRLLGPTRRCYAHAVLACPQNLRWKVWLAGSRMELAAGKCLLAQRLLQRGFQEVPDKSKSHVFLECSRLEEFCGNVQAAREILERARSETKSEWKVFLESVLLEIRASDWRRAAWEAQCALRIHSGAGRLWAVLVQLKQRQQGKGGSDLAQQAALKQALKEVPKSGEVWCEGARIHLNPLSKSFHLPTADKYLDFAIQFTPQYGDSFMECLRLRLLTQLLLPHAQEV 262
            AR+ LLGP R  YAHAVL CP NLRWKVWLAG+RMELAAG CL AQRLL R FQEVP+KSKSHVFLEC                  RAR ETKSEWKVFLESVLLEIRA+DW+RAA EAQ AL++HSGAGRLWAVLVQLKQR      SD AQQA+LKQALKEVPKSGEVWCEGARIHLNPLSK+F L TA KYL FA+QFTPQYGDSFMECLRL LL  + LP A+ +
Sbjct:  536 ARNSLLGPCRSAYAHAVLTCPHNLRWKVWLAGARMELAAGNCLHAQRLLNRAFQEVPEKSKSHVFLECXXXXXXXXXXXXXXXXXXRARVETKSEWKVFLESVLLEIRANDWQRAATEAQEALKVHSGAGRLWAVLVQLKQRD-----SDQAQQASLKQALKEVPKSGEVWCEGARIHLNPLSKAFDLETAGKYLGFAVQFTPQYGDSFMECLRLGLLNDIFLPKARAI 759          
BLAST of mRNA_S-ischiensis_contig9.20400.1 vs. uniprot
Match: W7TFT0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TFT0_9STRA)

HSP 1 Score: 265 bits (677), Expect = 2.950e-77
Identity = 137/233 (58.80%), Postives = 169/233 (72.53%), Query Frame = 0
Query:   31 ITVARDRLLGPTRRCYAHAVLACPQNLRWKVWLAGSRMELAAGKCLLAQRLLQRGFQEVPDKSKSHVFLECSRLEEFCGNVQAAREILERARSETKSEWKVFLESVLLEIRASDWRRAAWEAQCALRIHSGAGRLWAVLVQLKQRQQGKGGSDLAQQAALKQALKEVPKSGEVWCEGARIHLNPLSKSFHLPTADKYLDFAIQFTPQYGDSFMECLRLRLLTQLLLPHAQEVV 263
            I   R  LLG  R+ Y  A L  P NLRWKVWLAG+R EL AG+  +A+ LL+R F+EVPDKSK+HVFLEC+RLEE+ G       +L +AR E + EWKVFLESVLLE+RA +W RA  +A+ AL +H+G GRLWA+LVQL  R  G  G  +     L+QAL EVPKSGEVWCEGARIHL+P+S +F L  A +YLDFAIQFTPQYGDSF+E LRL L+ Q++ P A+ V+
Sbjct:  925 IPAVRGELLGRCRQYYVDAALTAPSNLRWKVWLAGARTELGAGRVDVARALLRRAFREVPDKSKAHVFLECARLEEYVGXXXXXXSVLAQARVEARGEWKVFLESVLLEMRAGEWVRAIDQARSALSVHTGTGRLWAILVQL--RYLGGAGEQVR---VLRQALSEVPKSGEVWCEGARIHLSPVSFNFDLELAQRYLDFAIQFTPQYGDSFLELLRLTLVRQVIEPVARSVI 1152          
BLAST of mRNA_S-ischiensis_contig9.20400.1 vs. uniprot
Match: A0A6S8EA78_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A6S8EA78_9STRA)

HSP 1 Score: 238 bits (608), Expect = 2.520e-68
Identity = 128/220 (58.18%), Postives = 152/220 (69.09%), Query Frame = 0
Query:   43 RRCYAHAVLACPQNLRWKVWLAGSRMELA----AGKCLL-------AQRLLQRGFQEVPDKSKSHVFLECSRLEEFCGNVQAAREILERARSETKSEWKVFLESVLLEIRASDWRRAAWEAQCALRIHSGAGRLWAVLVQLKQRQQGKGGSDLAQQAALKQALKEVPKSGEVWCEGARIHLNPLSKSFHLPTADKYLDFAIQFTPQYGDSFMECLRLRLL 251
            R  Y  +VL CP NLRWKVWLAG R ELA      K  +       AQ+LL R   +VPDKS++ V LECSR+EE+ G +  AREIL +AR ETK EWKVFLESV+LE+R  +   A  EA+ AL IHSG GRLWA+LVQL        G D  Q+   ++ALK+VPKSGEVWCEGAR+HL+PLS  F L TA +YL+FAIQFTPQYGDSF+E LR  LL
Sbjct:  696 RAAYVQSVLRCPNNLRWKVWLAGVRTELANADSKNKLTVDNAGVQKAQKLLNRALMDVPDKSRAQVLLECSRVEEYIGKIDKAREILAKARKETKHEWKVFLESVMLEVRCGNRDGALKEAKSALEIHSGTGRLWAILVQLTHAH----GPD-QQRLVFREALKQVPKSGEVWCEGARVHLHPLSPHFDLETASRYLEFAIQFTPQYGDSFVEALRFHLL 910          
BLAST of mRNA_S-ischiensis_contig9.20400.1 vs. uniprot
Match: A0A4D9D155_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D155_9STRA)

HSP 1 Score: 236 bits (603), Expect = 2.740e-67
Identity = 126/233 (54.08%), Postives = 153/233 (65.67%), Query Frame = 0
Query:   31 ITVARDRLLGPTRRCYAHAVLACPQNLRWKVWLAGSRMELAAGKCLLAQRLLQRGFQEVPDKSKSHVFLECSRLEEFCGNVQAAREILERARSETKSEWKVFLESVLLEIRASDWRRAAWEAQCALRIHSGAGRLWAVLVQLKQRQQGKGGSDLAQQAALKQALKEVPKSGEVWCEGARIHLNPLSKSFHLPTADKYLDFAIQFTPQYGDSFMECLRLRLLTQLLLPHAQEVV 263
            I   R  LLG  R+CY  A L  P NLRWKVWLAG+R EL AG+   A+ LL+R F EVPDKSK+H                        AR E + EWKVFLESVLLE+RA +W RA  +A+ AL +H+G GRLWA+LVQL  R  G  G  +     L+QAL EVPKSGEVWCEGARIHL+P+S +F L  A +YLDFAIQFTPQYGDSF+E LRL L+ Q++ P A+ ++
Sbjct: 1275 IPAVRGELLGRCRQCYVDAALTAPSNLRWKVWLAGARTELGAGRVDFARALLRRAFCEVPDKSKAHXXXXXXXXXXXXXXXXXXXXXXXXARVEARGEWKVFLESVLLEMRAGEWARAIDQARSALSVHTGTGRLWAILVQL--RYLGGAGEQVR---VLRQALSEVPKSGEVWCEGARIHLSPVSFNFDLELAQRYLDFAIQFTPQYGDSFLELLRLTLVRQVIEPVARSII 1502          
BLAST of mRNA_S-ischiensis_contig9.20400.1 vs. uniprot
Match: A0A7S4MSC1_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MSC1_9STRA)

HSP 1 Score: 224 bits (571), Expect = 1.750e-66
Identity = 115/222 (51.80%), Postives = 152/222 (68.47%), Query Frame = 0
Query:   43 RRCYAHAVLACPQNLRWKVWLAGSRMELAAGKCLLAQRLLQRGFQEVPDKSKSHVFLECSRLEEFCGNVQAAREILERARSETKSEWKVFLESVLLEIRASDWRRAAWEAQCALRIHSGAGRLWAVLVQLKQRQQGKGGSDLAQQAALKQALKEVPKSGEVWCEGARIHLNPLSKSFHLPTADKYLDFAIQFTPQYGDSFMECLRLRLLTQLLLPHAQEVVR 264
            RR +A  +L CP +L WKVWLAG RMEL AG+   A++L  R    VP+K ++ V LEC+RLEEF G+++ AR IL +AR    S+WKV+LES+ LE+R     RA   AQ AL +HSG GRLWA LVQL+Q        + AQ + LK+AL  VPKSGEVWCEG R+HLNP   +F L  A+ +LDFA +FTPQYGDSF+E LRL ++ + + P A ++++
Sbjct:   66 RRSFAKTILTCPPSLCWKVWLAGGRMELMAGRTDEARQLFLRSHDVVPEKGRAAVMLECARLEEFAGDIELARAILSKARFNAGSDWKVWLESIFLEMRCGMRGRAIRLAQNALDVHSGTGRLWAALVQLRQPD-----GEAAQMSVLKRALWSVPKSGEVWCEGGRLHLNPFFPNFGLEEAELHLDFATKFTPQYGDSFLETLRLNIVLEQICPIANDMIK 282          
BLAST of mRNA_S-ischiensis_contig9.20400.1 vs. uniprot
Match: A0A7S0GLS1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GLS1_9STRA)

HSP 1 Score: 221 bits (563), Expect = 4.910e-65
Identity = 114/215 (53.02%), Postives = 147/215 (68.37%), Query Frame = 0
Query:   43 RRCYAHAVLACPQNLRWKVWLAGSRMELAAGKCLLAQRLLQRGFQEVPDKSKSHVFLECSRLEEFCGNVQAAREILERARSETKSEWKVFLESVLLEIRASDWRRAAWEAQCALRIHSGAGRLWAVLVQLKQRQQGKGGSDLAQQAALKQALKEVPKSGEVWCEGARIHLNPLSKSFHLPTADKYLDFAIQFTPQYGDSFMECLRLRLLTQLLLP 257
            RR +  A+L+CP NL WKVWLA  RMEL AG+  +A++L  R +  VPDK +S V LEC+RLEEF  +V+ AR IL +AR++  S+WK++LESV LE+R    R+A   AQ AL IHS  GRLWA+LVQ++         ++ Q   L +AL  VPKSGEVWCE  R+HLNP   +F L  A+ YL FA +FTPQYGDSF+E ++L LL  LLLP
Sbjct:  204 RRSFVRAILSCPPNLCWKVWLASGRMELTAGRTSIARKLFMRAYNVVPDKGRSTVLLECARLEEFVDDVKLARAILCKARNDNDSDWKIWLESVSLELRCGRRRKAVELAQNALDIHSCTGRLWALLVQIRHED-----GEVKQSDVLIRALSSVPKSGEVWCEAGRLHLNPFVPTFDLDRAELYLMFATKFTPQYGDSFLETVKLELLKSLLLP 413          
BLAST of mRNA_S-ischiensis_contig9.20400.1 vs. uniprot
Match: A0A7S0Q4B3_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q4B3_9EUKA)

HSP 1 Score: 223 bits (568), Expect = 7.410e-65
Identity = 118/211 (55.92%), Postives = 144/211 (68.25%), Query Frame = 0
Query:   43 RRCYAHAVLACPQNLRWKVWLAGSRMELAAGKCLLAQRLLQRGFQEVPDKSKSHVFLECSRLEEFCGNVQAAREILERARSETKSEWKVFLESVLLEIRASDWRRAAWEAQCALRIHSGAGRLWAVLVQLKQRQQGKGGSDLAQQAALKQALKEVPKSGEVWCEGARIHLNPLSKSFHLPTADKYLDFAIQFTPQYGDSFMECLRLRLLTQ 253
            R  Y  +V  C  NLRWKVWL GSR EL   +  ++Q LL+R ++E P K+++ V LE SRL E CGNV+ AR++L  AR   + EWKVFLESVLLE+R+    RA  EA+ AL +H G GRLWAVL+QL+  Q         Q    +QAL EVPKSGEVWCEGARI LNP S  F+L  A  +LDFAI+FTPQYGDSF+E LRL+LL Q
Sbjct:  290 RAAYVKSVATCAANLRWKVWLGGSRTELCHSQFNVSQALLERAYEESPPKTRAIVMLEQSRLHELCGNVEQARKLLRGARKTNRQEWKVFLESVLLELRSQHVERALREARKALEVHRGTGRLWAVLIQLEHAQ-----GVHQQLRVFQQALLEVPKSGEVWCEGARICLNPFSDCFNLEAAHNFLDFAIEFTPQYGDSFIEYLRLQLLMQ 495          
BLAST of mRNA_S-ischiensis_contig9.20400.1 vs. uniprot
Match: A0A7S1VNZ6_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VNZ6_9STRA)

HSP 1 Score: 226 bits (576), Expect = 7.690e-65
Identity = 123/224 (54.91%), Postives = 155/224 (69.20%), Query Frame = 0
Query:   36 DRLLGPTRRCYAHAVLACPQNLRWKVWLAGSRMELAAGKCLLAQRLLQRGFQEVPDKSKSHVFLECSRLEEFCGNVQAAREILERARSETKSEWKVFLESVLLEIRASDWRRAAWEAQCALRIHSGAGRLWAVLVQLKQRQQGKGGSDLAQQAALKQALKEVPKSGEVWCEGARIHLNPLSKSFHLPTADKYLDFAIQFTPQYGDSFMECLRLRLLTQLLLPHA 259
            D LL P R+ +A   + C  NL WKV LAG RMELAAG    A++L  R  + VP+K K    LECSRLEEF GNV  AR IL ++R E  S+WKV+LESVL+E+R  +  RA   A+ AL+IH+G GRLWA LVQL+  ++    +D  Q AALK+AL+ VPKSGEVWCEG R++LNP ++ F L  A ++L FA +FTPQYGDSF+E LRL LL + LLP A
Sbjct:  354 DVLLEPCRKQFAMTTMTCQANLCWKVLLAGGRMELAAGNFEKARKLFHRAHRSVPEKGKVATLLECSRLEEFIGNVDRARAILTKSRIEITSDWKVWLESVLVEVRGGEKDRAIDLAKRALQIHTGTGRLWAALVQLRYSEE----TDETQYAALKKALRAVPKSGEVWCEGGRMNLNPFARCFDLDEARRHLFFATRFTPQYGDSFVESLRLELLEKWLLPVA 573          
BLAST of mRNA_S-ischiensis_contig9.20400.1 vs. uniprot
Match: A0A7R9UFL8_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UFL8_9STRA)

HSP 1 Score: 217 bits (553), Expect = 6.040e-64
Identity = 113/218 (51.83%), Postives = 155/218 (71.10%), Query Frame = 0
Query:   56 NLRWKVWLAGSRMELAAGKCLLAQRLLQRGFQEVPDKSKSHVFLECSRLEEFCGNVQAAREILERARSETKSEWKVFLESVLLEIRASDWRRAAWEAQCALRIHSGAGRLWAVLVQLKQRQQGKGGSD--LAQQAALKQALKEVPKSGEVWCEGARIHLNPLSKSFHLPTADKYLDFAIQFTPQYGDSFMECLRLRLLTQLLLPHAQEVVRRRRESKQ 271
            NLRWKVWLA +R EL  G+  LA+ L++R  +E+P K++   +LE SR+EEF G++++AR+IL  AR E  +EWK+FLESV+LE+R+   R A  +A+ AL +H G GRLWA L+ L+        SD   AQ A  ++AL+EVPKSGEVW EGAR+HLNPLS+ F    A ++L+FAI FTPQYGDSF+E +RLRL+ + LLP A  + RR R +++
Sbjct:    1 NLRWKVWLAAARTELGVGRADLARLLVKRSMREIPPKARYMAWLEMSRIEEFVGDLESARQILCAARQEAVTEWKIFLESVMLELRSGHIREATLQAETALEVHRGTGRLWAALITLR-------ASDGVTAQAAVFRRALQEVPKSGEVWAEGARLHLNPLSQLFDPECAARFLEFAILFTPQYGDSFLELIRLRLVLRCLLPQALLLYRRGRHARE 211          
BLAST of mRNA_S-ischiensis_contig9.20400.1 vs. uniprot
Match: A0A7S1YIW7_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YIW7_9STRA)

HSP 1 Score: 226 bits (576), Expect = 1.130e-63
Identity = 123/224 (54.91%), Postives = 155/224 (69.20%), Query Frame = 0
Query:   36 DRLLGPTRRCYAHAVLACPQNLRWKVWLAGSRMELAAGKCLLAQRLLQRGFQEVPDKSKSHVFLECSRLEEFCGNVQAAREILERARSETKSEWKVFLESVLLEIRASDWRRAAWEAQCALRIHSGAGRLWAVLVQLKQRQQGKGGSDLAQQAALKQALKEVPKSGEVWCEGARIHLNPLSKSFHLPTADKYLDFAIQFTPQYGDSFMECLRLRLLTQLLLPHA 259
            D LL P R+ +A   + C  NL WKV LAG RMELAAG    A++L  R  + VP+K K    LECSRLEEF GNV  AR IL ++R E  S+WKV+LESVL+E+R  +  RA   A+ AL+IH+G GRLWA LVQL+  ++    +D  Q AALK+AL+ VPKSGEVWCEG R++LNP ++ F L  A ++L FA +FTPQYGDSF+E LRL LL + LLP A
Sbjct: 1214 DVLLEPCRKQFAMTTMTCQANLCWKVLLAGGRMELAAGNFEKARKLFHRAHRSVPEKGKVATLLECSRLEEFIGNVDRARAILTKSRIEITSDWKVWLESVLVEVRGGEKDRAIDLAKRALQIHTGTGRLWAALVQLRYSEE----TDETQYAALKKALRAVPKSGEVWCEGGRMNLNPFARCFDLDEARRHLFFATRFTPQYGDSFVESLRLELLEKWLLPVA 1433          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20400.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LN71_ECTSI1.220e-9973.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
W7TFT0_9STRA2.950e-7758.80Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
A0A6S8EA78_9STRA2.520e-6858.18Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A4D9D155_9STRA2.740e-6754.08Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S4MSC1_9STRA1.750e-6651.80Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S0GLS1_9STRA4.910e-6553.02Hypothetical protein (Fragment) n=1 Tax=Proboscia ... [more]
A0A7S0Q4B3_9EUKA7.410e-6555.92Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A7S1VNZ6_9STRA7.690e-6554.91Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7R9UFL8_9STRA6.040e-6451.83Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S1YIW7_9STRA1.130e-6354.91Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 104..124
NoneNo IPR availablePANTHERPTHR11246PRE-MRNA SPLICING FACTORcoord: 42..254
NoneNo IPR availablePANTHERPTHR11246:SF20TPR-CONTAINING PROTEIN DDB_G0280363coord: 42..254
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 56..204

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig9contigS-ischiensis_contig9:204582..208073 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig9.20400.1mRNA_S-ischiensis_contig9.20400.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig9 204582..208073 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig9.20400.1 ID=prot_S-ischiensis_contig9.20400.1|Name=mRNA_S-ischiensis_contig9.20400.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=277bp
SASAPAGGGEPPSGEAVIVQGQEAEGEPLPITVARDRLLGPTRRCYAHAV
LACPQNLRWKVWLAGSRMELAAGKCLLAQRLLQRGFQEVPDKSKSHVFLE
CSRLEEFCGNVQAAREILERARSETKSEWKVFLESVLLEIRASDWRRAAW
EAQCALRIHSGAGRLWAVLVQLKQRQQGKGGSDLAQQAALKQALKEVPKS
GEVWCEGARIHLNPLSKSFHLPTADKYLDFAIQFTPQYGDSFMECLRLRL
LTQLLLPHAQEVVRRRRESKQGAGGSG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf