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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 1158 |
| Cds size | 753 |
| Stop | 0 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815581.8177-UTR-S-ischiensis_contig11:240290..240693 | 1622815581.8177-UTR-S-ischiensis_contig11:240290..240693 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig11 240291..240693 + |
| 1695739783.92423-UTR-S-ischiensis_contig11:240290..240693 | 1695739783.92423-UTR-S-ischiensis_contig11:240290..240693 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig11 240291..240693 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815581.8296452-CDS-S-ischiensis_contig11:240693..241446 | 1622815581.8296452-CDS-S-ischiensis_contig11:240693..241446 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig11 240694..241446 + |
| 1695739783.9333098-CDS-S-ischiensis_contig11:240693..241446 | 1695739783.9333098-CDS-S-ischiensis_contig11:240693..241446 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig11 240694..241446 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig11.1987.1 >prot_S-ischiensis_contig11.1987.1 ID=prot_S-ischiensis_contig11.1987.1|Name=mRNA_S-ischiensis_contig11.1987.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=251bp
MTENGGGREGGGLARECVSKPVAPEHARMSQTLPRHAACMHHIWQPSPGR
RRLTRRPLARRHCLGHLAPPPSHRHSPGLGDPRSLGGVTDCPGVTTLALP
PPPPPPPPTPTPMPPMLPLPPLRRRVGEGVLASLKSRATGCCSRAFPPPG
GTGGGTGRTPPPPPPPPPRPWPGRLPLATSRPVLMSADGVTCARLPWGLG
GGGGGRTGPSRPASAPAASWGARAASPEPCLLCGGATTEADASSPPPPCS
A back to topmRNA from alignment at S-ischiensis_contig11:240291..241446+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig11.1987.1 ID=mRNA_S-ischiensis_contig11.1987.1|Name=mRNA_S-ischiensis_contig11.1987.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1156bp|location=Sequence derived from alignment at S-ischiensis_contig11:240291..241446+ (Schizocladia ischiensis KU_0333)
CCCCTCACTCCCCCCGCCATGGCCCCACCACAATTTGAACCATTCGCCAA
TGTATTGTCTGAGCCCCGACTCGTTCGCCATCCCCCACTGTGACTGCAAG
GTGGCGCCGCGCCACACCCGCCCCCCGCACCTGTCAATATTTGCCGTTAA
CGGCCTGTGTGAGGGCTTGGAGCCCCATGTGAGCGCGTGGGCGCCTCAGG
CAACTAATTCCAGGCTACCTCCTGAACTTCACTGTATACATTTGGGACTC
GGAGGCCGCTGCGGCTGCCGCCTGGGCTTTCCCATGCAACACTTGCAGGA
CTCCGAGTCCCGTCGCCACCGCCCCCGAAGCAGCAGAGGCAGCAGTGATC
CGTAGACCTTGGCGGCGTGCGAGTTGGCGGCTGTGTGGCCGCGATAACTC
GACATGACCGAGAACGGCGGCGGTAGGGAGGGCGGCGGGCTGGCACGCGA
GTGTGTGAGCAAGCCGGTGGCACCGGAGCATGCTCGCATGTCTCAAACAC
TACCCCGGCACGCCGCGTGCATGCACCACATCTGGCAGCCCAGCCCTGGG
CGCCGCCGCCTGACTCGTCGCCCGCTGGCACGTAGGCACTGTCTCGGTCA
TCTTGCACCTCCCCCAAGTCACCGTCACAGCCCTGGGCTGGGGGATCCCC
GGTCGTTGGGGGGCGTGACAGATTGCCCGGGAGTCACGACGCTCGCTTTG
CCGCCGCCCCCGCCGCCGCCGCCGCCAACGCCAACGCCGATGCCGCCGAT
GCTACCGCTGCCGCCACTGAGGCGCCGCGTGGGTGAGGGGGTGCTTGCGT
CGCTGAAGTCCAGGGCCACCGGCTGCTGCTCAAGAGCCTTTCCCCCCCCC
GGTGGCACAGGCGGCGGCACGGGCAGGACTCCACCGCCGCCGCCGCCGCC
GCCACCGCGTCCCTGGCCGGGGAGGCTGCCGCTCGCCACCTCAAGGCCAG
TCCTCATGTCGGCGGACGGGGTCACCTGCGCCCGGCTCCCCTGGGGCCTC
GGTGGCGGCGGCGGCGGCAGGACAGGGCCCAGCAGGCCTGCCTCTGCCCC
CGCGGCCTCTTGGGGCGCCAGGGCGGCTTCCCCCGAGCCGTGCCTGCTCT
GCGGAGGAGCGACCACTGAGGCAGACGCCTCCTCACCCCCGCCGCCCTGC
TCCGCC back to topCoding sequence (CDS) from alignment at S-ischiensis_contig11:240291..241446+ >mRNA_S-ischiensis_contig11.1987.1 ID=mRNA_S-ischiensis_contig11.1987.1|Name=mRNA_S-ischiensis_contig11.1987.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1506bp|location=Sequence derived from alignment at S-ischiensis_contig11:240291..241446+ (Schizocladia ischiensis KU_0333)
ATGACCGAGAACGGCGGCGGTAGGGAGGGCGGCGGGCTGGCACGCGAGTG
TGTGAGCAAGCCGGTGGCACCGGAGCATGCTCGCATGTCTCAAACACTAC
CCCGGCACGCCGCGTGCATGCACCACATCTGGCAGCCCAGCCCTGGGCGC
CGCCGCCTGACTCGTCGCCCGCTGGCACGTAGGCACTGTCTCGGTCATCT
TGCACCTCCCCCAAGTCACCGTCACAGCCCTGGGCTGGGGGATCCCCGGT
CGTTGGGGGGCGTGACAGATTGCCCGGGAGTCACGACGCTCGCTTTGCCG
CCGCCCCCGCCGCCGCCGCCGCCAACGCCAACGCCGATGCCGCCGATGCT
ACCGCTGCCGCCACTGAGGCGCCGCGTGGGTGAGGGGGTGCTTGCGTCGC
TGAAGTCCAGGGCCACCGGCTGCTGCTCAAGAGCCTTTCCCCCCCCCGGT
GGCACAGGCGGCGGCACGGGCAGGACTCCACCGCCGCCGCCGCCGCCGCC
ACCGCGTCCCTGGCCGGGGAGGCTGCCGCTCGCCACCTCAAGGCCAGTCC
TCATGTCGGCGGACGGGGTCACCTGCGCCCGGCTCCCCTGGGGCCTCGGT
GGCGGCGGCGGCGGCAGGACAGGGCCCAGCAGGCCTGCCTCTGCCCCCGC
GGCCTCTTGGGGCGCCAGGGCGGCTTCCCCCGAGCCGTGCCTGCTCTGCG
GAGGAGCGACCACTGAGGCAGACGCCTCCTCACCCCCGCCGCCCTGCTCC
GCCATGACCGAGAACGGCGGCGGTAGGGAGGGCGGCGGGCTGGCACGCGA
GTGTGTGAGCAAGCCGGTGGCACCGGAGCATGCTCGCATGTCTCAAACAC
TACCCCGGCACGCCGCGTGCATGCACCACATCTGGCAGCCCAGCCCTGGG
CGCCGCCGCCTGACTCGTCGCCCGCTGGCACGTAGGCACTGTCTCGGTCA
TCTTGCACCTCCCCCAAGTCACCGTCACAGCCCTGGGCTGGGGGATCCCC
GGTCGTTGGGGGGCGTGACAGATTGCCCGGGAGTCACGACGCTCGCTTTG
CCGCCGCCCCCGCCGCCGCCGCCGCCAACGCCAACGCCGATGCCGCCGAT
GCTACCGCTGCCGCCACTGAGGCGCCGCGTGGGTGAGGGGGTGCTTGCGT
CGCTGAAGTCCAGGGCCACCGGCTGCTGCTCAAGAGCCTTTCCCCCCCCC
GGTGGCACAGGCGGCGGCACGGGCAGGACTCCACCGCCGCCGCCGCCGCC
GCCACCGCGTCCCTGGCCGGGGAGGCTGCCGCTCGCCACCTCAAGGCCAG
TCCTCATGTCGGCGGACGGGGTCACCTGCGCCCGGCTCCCCTGGGGCCTC
GGTGGCGGCGGCGGCGGCAGGACAGGGCCCAGCAGGCCTGCCTCTGCCCC
CGCGGCCTCTTGGGGCGCCAGGGCGGCTTCCCCCGAGCCGTGCCTGCTCT
GCGGAGGAGCGACCACTGAGGCAGACGCCTCCTCACCCCCGCCGCCCTGC
TCCGCC back to top
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