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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 943 |
| Cds size | 942 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817368.5062006-CDS-S-ischiensis_contig9:2859415..2859865 | 1622817368.5062006-CDS-S-ischiensis_contig9:2859415..2859865 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig9 2859416..2859865 - |
| 1695741061.5546265-CDS-S-ischiensis_contig9:2859415..2859865 | 1695741061.5546265-CDS-S-ischiensis_contig9:2859415..2859865 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig9 2859416..2859865 - |
| 1622817368.519909-CDS-S-ischiensis_contig9:2860228..2860681 | 1622817368.519909-CDS-S-ischiensis_contig9:2860228..2860681 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig9 2860229..2860681 - |
| 1695741061.5670512-CDS-S-ischiensis_contig9:2860228..2860681 | 1695741061.5670512-CDS-S-ischiensis_contig9:2860228..2860681 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig9 2860229..2860681 - |
| 1622817368.5305102-CDS-S-ischiensis_contig9:2860840..2860879 | 1622817368.5305102-CDS-S-ischiensis_contig9:2860840..2860879 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig9 2860841..2860879 - |
| 1695741061.584124-CDS-S-ischiensis_contig9:2860840..2860879 | 1695741061.584124-CDS-S-ischiensis_contig9:2860840..2860879 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig9 2860841..2860879 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig9.20731.1 >prot_S-ischiensis_contig9.20731.1 ID=prot_S-ischiensis_contig9.20731.1|Name=mRNA_S-ischiensis_contig9.20731.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=314bp
LEQESLVGITEIQVVVLRILTLLLDQDIDRQIDLVLTLVKTYEAGGLRNN
HRNDHDHDPASNNPAGTSTGASPSPRPAGSVAATTPPPLPPSLEECVADM
WRTVLRSRSGAGLLSTARVQGLPRRLLMLAGAAAGRGGARTRMGRSLAAH
ALHLLRRVHDQGRQLLREVVRVTTISDRQIIATYHGLSEAVSVLKIYGRR
RAVASTAASLAASSSSSTTTTTGGSRGGVASHTQQRQQGPGVAAVGTPTR
RARTLSAALVALRGALELAPDRERRAVVERMLATLEAVPVLLDMLRGARV
HLADAANAAAAGGP back to topmRNA from alignment at S-ischiensis_contig9:2859415..2860879- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig9.20731.1 ID=mRNA_S-ischiensis_contig9.20731.1|Name=mRNA_S-ischiensis_contig9.20731.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1465bp|location=Sequence derived from alignment at S-ischiensis_contig9:2859415..2860879- (Schizocladia ischiensis KU_0333)
CTAGAGCAGGAGTCGCTTGTCGGCATCACTGAGATTCAGGTGTGTGTGTG
TGTGTGCGTGCGTGTTTATGTGTATGTGTACTTGCGTGTCCATGTGCGCA
CACGTCTGTGCATCCCCTTTGGTCACCCCTGTGGGACGTGTGGTCAACAG
TCATATGGCTACATACAGCAGGCAACTCCTGAGTACCCCCCTCCCCAGGT
GGTGGTCTTGAGGATACTCACCCTTCTGCTGGACCAGGACATCGACCGCC
AGATTGACTTGGTCCTCACGCTGGTCAAAACCTACGAGGCGGGCGGGCTG
CGCAACAACCACCGCAACGACCACGACCACGACCCTGCCTCCAACAATCC
CGCAGGGACCAGCACCGGCGCCTCCCCCTCCCCCCGGCCGGCGGGCTCCG
TGGCCGCCACCACGCCCCCTCCCCTGCCCCCGTCCCTCGAGGAGTGCGTC
GCCGACATGTGGCGGACCGTGCTCCGCAGCCGGAGCGGGGCGGGCCTGCT
GTCGACGGCAAGGGTGCAGGGCCTGCCGCGGCGGCTGCTGATGCTGGCGG
GCGCCGCGGCCGGGCGGGGGGGGGCACGCACAAGGATGGGGCGCTCGCTG
GCTGCGCACGCGCTGCACCTGCTGCGGAGGGTGCACGACCAGGGGCGCCA
GGTGTGGGGGGGGCTGAGCGTGTGTGTGTGTGTGTGTGTGCGTGCGCGGG
CGTGGTGGATTGTTTGCCTGCCGCTTTTTGGCGCATCCCATCCCGGCCGC
AAGAACCGAGCCTGTCGACCCGTGATCGAACGAATGCGCTTCCCTCAACA
CCCCCATCCCTTCGCACCGCATCCCCTCCTTGCACCCCTCCCCCCCGCCC
CCCTTTCCCCCTCCTGCTCCTCCACTCCGCCCCTCCCCCTCCCCTCCCCC
CTCACCCCTCTCCTGCCCCCCCCTGGCCGCCCCCCTTCCCTCCTCCCGCT
CCCCCCCCCCTCCCCTGCCCCTCCCCTTCCCCTTCCCCACTCCCCCCGGG
GGCCATCGCGCCAGCTCCTTCGCGAGGTCGTCCGCGTCACCACCATCTCC
GACAGACAGATCATCGCCACCTACCACGGCCTCTCCGAGGCCGTCTCGGT
GCTCAAGATCTACGGGCGGCGGCGGGCGGTCGCATCCACCGCCGCCTCCT
TAGCTGCCTCCTCCTCGTCATCCACCACCACCACCACCGGCGGCAGCAGG
GGGGGGGTCGCCTCTCACACCCAGCAGCGGCAACAGGGACCGGGAGTGGC
GGCCGTCGGCACGCCCACGCGGCGGGCCAGAACCCTCTCGGCGGCCCTGG
TCGCCCTGCGAGGGGCGCTAGAGCTCGCCCCAGACCGCGAGCGCCGCGCC
GTGGTCGAGCGCATGCTCGCCACCCTGGAGGCGGTGCCCGTGCTCCTCGA
CATGCTCCGCGGGGCGCGGGTCCACCTCGCGGACGCCGCCAACGCCGCCG
CCGCCGGGGGCCCCT back to topCoding sequence (CDS) from alignment at S-ischiensis_contig9:2859415..2860879- >mRNA_S-ischiensis_contig9.20731.1 ID=mRNA_S-ischiensis_contig9.20731.1|Name=mRNA_S-ischiensis_contig9.20731.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1884bp|location=Sequence derived from alignment at S-ischiensis_contig9:2859415..2860879- (Schizocladia ischiensis KU_0333)
CTAGAGCAGGAGTCGCTTGTCGGCATCACTGAGATTCAGCTAGAGCAGGA
GTCGCTTGTCGGCATCACTGAGATTCAGGTGGTGGTCTTGAGGATACTCA
CCCTTCTGCTGGACCAGGACATCGACCGCCAGATTGACTTGGTCCTCACG
CTGGTCAAAACCTACGAGGCGGGCGGGCTGCGCAACAACCACCGCAACGA
CCACGACCACGACCCTGCCTCCAACAATCCCGCAGGGACCAGCACCGGCG
CCTCCCCCTCCCCCCGGCCGGCGGGCTCCGTGGCCGCCACCACGCCCCCT
CCCCTGCCCCCGTCCCTCGAGGAGTGCGTCGCCGACATGTGGCGGACCGT
GCTCCGCAGCCGGAGCGGGGCGGGCCTGCTGTCGACGGCAAGGGTGCAGG
GCCTGCCGCGGCGGCTGCTGATGCTGGCGGGCGCCGCGGCCGGGCGGGGG
GGGGCACGCACAAGGATGGGGCGCTCGCTGGCTGCGCACGCGCTGCACCT
GCTGCGGAGGGTGCACGACCAGGGGCGCCAGGTGGTGGTCTTGAGGATAC
TCACCCTTCTGCTGGACCAGGACATCGACCGCCAGATTGACTTGGTCCTC
ACGCTGGTCAAAACCTACGAGGCGGGCGGGCTGCGCAACAACCACCGCAA
CGACCACGACCACGACCCTGCCTCCAACAATCCCGCAGGGACCAGCACCG
GCGCCTCCCCCTCCCCCCGGCCGGCGGGCTCCGTGGCCGCCACCACGCCC
CCTCCCCTGCCCCCGTCCCTCGAGGAGTGCGTCGCCGACATGTGGCGGAC
CGTGCTCCGCAGCCGGAGCGGGGCGGGCCTGCTGTCGACGGCAAGGGTGC
AGGGCCTGCCGCGGCGGCTGCTGATGCTGGCGGGCGCCGCGGCCGGGCGG
GGGGGGGCACGCACAAGGATGGGGCGCTCGCTGGCTGCGCACGCGCTGCA
CCTGCTGCGGAGGGTGCACGACCAGGGGCGCCAGCTCCTTCGCGAGGTCG
TCCGCGTCACCACCATCTCCGACAGACAGATCATCGCCACCTACCACGGC
CTCTCCGAGGCCGTCTCGGTGCTCAAGATCTACGGGCGGCGGCGGGCGGT
CGCATCCACCGCCGCCTCCTTAGCTGCCTCCTCCTCGTCATCCACCACCA
CCACCACCGGCGGCAGCAGGGGGGGGGTCGCCTCTCACACCCAGCAGCGG
CAACAGGGACCGGGAGTGGCGGCCGTCGGCACGCCCACGCGGCGGGCCAG
AACCCTCTCGGCGGCCCTGGTCGCCCTGCGAGGGGCGCTAGAGCTCGCCC
CAGACCGCGAGCGCCGCGCCGTGGTCGAGCGCATGCTCGCCACCCTGGAG
GCGGTGCCCGTGCTCCTCGACATGCTCCGCGGGGCGCGGGTCCACCTCGC
GGACGCCGCCAACGCCGCCGCCGCCGGGGGCCCCCTCCTTCGCGAGGTCG
TCCGCGTCACCACCATCTCCGACAGACAGATCATCGCCACCTACCACGGC
CTCTCCGAGGCCGTCTCGGTGCTCAAGATCTACGGGCGGCGGCGGGCGGT
CGCATCCACCGCCGCCTCCTTAGCTGCCTCCTCCTCGTCATCCACCACCA
CCACCACCGGCGGCAGCAGGGGGGGGGTCGCCTCTCACACCCAGCAGCGG
CAACAGGGACCGGGAGTGGCGGCCGTCGGCACGCCCACGCGGCGGGCCAG
AACCCTCTCGGCGGCCCTGGTCGCCCTGCGAGGGGCGCTAGAGCTCGCCC
CAGACCGCGAGCGCCGCGCCGTGGTCGAGCGCATGCTCGCCACCCTGGAG
GCGGTGCCCGTGCTCCTCGACATGCTCCGCGGGGCGCGGGTCCACCTCGC
GGACGCCGCCAACGCCGCCGCCGCCGGGGGCCCC back to top
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