prot_S-ischiensis_contig87.20261.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig87.20261.1
Unique Nameprot_S-ischiensis_contig87.20261.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length123
Homology
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BLAST of mRNA_S-ischiensis_contig87.20261.1 vs. uniprot
Match: A0A835YVW1_9STRA (MYND-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVW1_9STRA)

HSP 1 Score: 113 bits (282), Expect = 6.520e-29
Identity = 55/108 (50.93%), Postives = 61/108 (56.48%), Query Frame = 0 
Query:    1 MFSFSREFCSRSHRCCTRCGTHGDKRHRGDWRTCSSGTCTAIQDQKDLWYGNNGYNFTPTLDVPEGNYHTVECDGCKCRIHTGFEGYSTSSHPENGTPMTQCEKCTHA 108
            +FS+SREFC RSH   T CG H    H GDWRTC      A     D WY NNGYNFTP    P+G++HT ECD CK R+H GFEGYST            C  CT A
Sbjct:  105 LFSYSREFCDRSHDRYTACGFHHGAGHAGDWRTCER---CAADFNDDYWYSNNGYNFTPGPAPPKGSFHTAECDVCKGRVHRGFEGYSTYRG------QVSCNDCTSA 203
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BLAST of mRNA_S-ischiensis_contig87.20261.1 vs. uniprot
Match: A0A7S2RFB8_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RFB8_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 2.460e-14
Identity = 38/93 (40.86%), Postives = 54/93 (58.06%), Query Frame = 0 
Query:    1 MFSFSREFCSRSHRCCTRCGTHGDKRHRGDWRTCSSGTCTAIQDQKDL--WYGNNGYNFTPTL--DVPEGNYHTVECDGCKCRIHTGFEGYST 89
            +FS+SR+FC RSH   T C +H ++ H GDWRTC        ++ +    +   NG+N TP L  D+P+G+  T+ C GCK RI  GF+   T
Sbjct:  236 VFSYSRDFCHRSHCFYTVCASHFEEGHSGDWRTCQDCKVARAEEGEGSRSFSSTNGFNITPCLESDIPQGSQITIPCHGCKGRITPGFDAKRT 328
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig87.20261.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A835YVW1_9STRA6.520e-2950.93MYND-type domain-containing protein n=1 Tax=Tribon... [more]
A0A7S2RFB8_9STRA2.460e-1440.86Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig87contigS-ischiensis_contig87:345649..347420 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig87.20261.1mRNA_S-ischiensis_contig87.20261.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig87 345312..350834 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig87.20261.1 ID=prot_S-ischiensis_contig87.20261.1|Name=mRNA_S-ischiensis_contig87.20261.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=123bp
MFSFSREFCSRSHRCCTRCGTHGDKRHRGDWRTCSSGTCTAIQDQKDLWY
GNNGYNFTPTLDVPEGNYHTVECDGCKCRIHTGFEGYSTSSHPENGTPMT
QCEKCTHAGSVSGRSQRLVQAP*
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