mRNA_S-ischiensis_contig84.20079.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig84.20079.1
Unique NamemRNA_S-ischiensis_contig84.20079.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
[Close]
BLAST of mRNA_S-ischiensis_contig84.20079.1 vs. uniprot
Match: A0A836CKD9_9STRA (DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKD9_9STRA)

HSP 1 Score: 827 bits (2135), Expect = 2.070e-293
Identity = 416/566 (73.50%), Postives = 498/566 (87.99%), Query Frame = 1 
Query:    1 MVGEVLGKYHPHGDVAVYDALVRMAQDFVMAAPLIAGHGNFGSVDNDPAAAMRYTECKLAPLSRDALMADVALDTVELVPNFDGNEVEPVVLPARLPMLLLNGATGIAVGMATNIPPHNLGELTEAVLALIRDPDLPDEDLFRIVPAPDFPTGGCIMGLSGARSLYQTSNGGVTVRATTHMEVLEGAKGRPSRNAIVVTELPYMVNKSGLLEKMAGLVNDKKLEGISDLRDESDREGIRVVVELKRDAVPQVVLNNLFKKTQLQISFSGNMLALGDDGKQPQRFTLKAALQSFVEYRFQTVRRRTAFELDKVKTREHIVAGMLLALKDIDNVIEVIRESKDQSKARELLQGEAFGLSLEQADAILGLRLGRLTSMEEDKMEREGKDLRKQIKRLEGIMSEDTSVFDVMEKELEELKSKHAVPRRTIIQPDEGELSEEDLLANDRSVVVVTAAGYIKRMPIEEFTQQGRGTRGKAGAKMSDEDDTVVHFFTCNDHDTVLFVSDRGIAYGIRAFQVPTASRTAKGVPMPQVLPLASEEGITSIMPVSEFRDDEYLVLLSKQGYIKKTA 1698
            +VGEVLGK+HPHGDVAVYDALVRMAQDFVMAAPLIAGHGNFGS+D DP AAMRYTE KLAP++RDAL+ADVA+DTV+ VPNFDGNE EPVVLPARLP+LLLNGATGIAVGMATNIPPHNLGELT+A +ALI+DP+LP+ DLF+IVPAPDFP+GG IMGL+GAR +Y TSNG VT+RATTH+E +   + RP RNA++VTE+PYMVNK+ LLEK+A LVN+KKL+GI+DLRDESDR+GIRVV+ELKRDAVPQVV NNL+KKTQLQ SFSGNMLA+G DG QPQRFTL+A L SF+ +RF+TVRRRTA+EL KV+ R+HIV GML+AL  ++ VIE++R SKD + AR+ L  + FGLS EQADA+L LRLGRLT  EE K+++E  DL K+IKRL G+M +D SV  VM KEL ELK+KHAVPRR+II+ DEGEL++EDLLAND S++V+T +GYIKRMP+EEF  Q RGTRGKAGAK+SD  D V  FFTC DH+TVLFVSDRG+AYG+RAFQVPTASRTAKGVP+PQVLPL+++E I+S++PV EF+DDEYLVLL+K+G+IKKT+
Sbjct:   48 VVGEVLGKFHPHGDVAVYDALVRMAQDFVMAAPLIAGHGNFGSIDADPPAAMRYTESKLAPVARDALLADVAMDTVDFVPNFDGNEQEPVVLPARLPILLLNGATGIAVGMATNIPPHNLGELTDACVALIKDPELPEADLFKIVPAPDFPSGGTIMGLAGARKMYTTSNGSVTLRATTHIESI-AQRTRPPRNAVIVTEMPYMVNKAALLEKIAALVNEKKLDGIADLRDESDRDGIRVVIELKRDAVPQVVQNNLYKKTQLQTSFSGNMLAIGADGLQPQRFTLRALLDSFLAFRFKTVRRRTAYELAKVQARDHIVEGMLIALARVEEVIELVRGSKDNATARQHLTNKDFGLSTEQADAVLALRLGRLTKAEEIKLKKEHTDLTKEIKRLLGLMQDDESVRQVMVKELLELKAKHAVPRRSIIKKDEGELNDEDLLANDNSIIVITRSGYIKRMPLEEFQAQRRGTRGKAGAKLSDPGDEVAQFFTCRDHNTVLFVSDRGVAYGLRAFQVPTASRTAKGVPVPQVLPLSADERISSVIPVEEFKDDEYLVLLTKRGWIKKTS 612
[Close]
BLAST of mRNA_S-ischiensis_contig84.20079.1 vs. uniprot
Match: A0A6H5KKP9_9PHAE (DNA topoisomerase (ATP-hydrolyzing) n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKP9_9PHAE)

HSP 1 Score: 835 bits (2156), Expect = 4.520e-293
Identity = 420/565 (74.34%), Postives = 493/565 (87.26%), Query Frame = 1 
Query:    1 MVGEVLGKYHPHGDVAVYDALVRMAQDFVMAAPLIAGHGNFGSVDNDPAAAMRYTECKLAPLSRDALMADVALDTVELVPNFDGNEVEPVVLPARLPMLLLNGATGIAVGMATNIPPHNLGELTEAVLALIRDPDLPDEDLFRIVPAPDFPTGGCIMGLSGARSLYQTSNGGVTVRATTHMEVLEGAKGRPSRNAIVVTELPYMVNKSGLLEKMAGLVNDKKLEGISDLRDESDREGIRVVVELKRDAVPQVVLNNLFKKTQLQISFSGNMLALGDDGKQPQRFTLKAALQSFVEYRFQTVRRRTAFELDKVKTREHIVAGMLLALKDIDNVIEVIRESKDQSKARELLQGEAFGLSLEQADAILGLRLGRLTSMEEDKMEREGKDLRKQIKRLEGIMSEDTSVFDVMEKELEELKSKHAVPRRTIIQPDEGELSEEDLLANDRSVVVVTAAGYIKRMPIEEFTQQGRGTRGKAGAKMSDEDDTVVHFFTCNDHDTVLFVSDRGIAYGIRAFQVPTASRTAKGVPMPQVLPLASEEGITSIMPVSEFRDDEYLVLLSKQGYIKKT 1695
            +VGEVLGKYHPHGD+AVYDALVRMAQDFVM+APLI GHGNFGS+DNDPAAAMRYTECKL+ +++D L+ D+ LDTV++  NFDGNE EPVVLP+RLP+LL+NGATGIAVGMATNIPPHNLGE+  A +ALIR+P+LPD+ LFR++PAPDFPTGG IMGL+GAR LY TSNGGVT+RATTH+EV+E AKGR  RNA+VVTELPY VNKS LL+KMA +VNDKKLEGISDLRDESDR+G+RVVVELKRDA PQVV NNLFKKTQLQ SFSGNMLALG DG +P RF+L+AA+QSFV++RF TVRRRTAFEL KV+ REHIV GML AL  ID VIE++R S D   AR+ L  E +GLS EQADAIL LRLGRLTSMEE K++ E +DL+  ++RLEG+M+ED+ V D++ +EL E K+KHAVPRRT+I+PDEGEL EEDLLAND SVVVVTAAGYIKRMP+EEFT Q RGTRGKAGAKMS + D V HFFTC DHDT+LFVSD+G+AYGIRAFQVP  SRTAKGVP+PQVLP+A +E I S++ V +FR+DEYLVLL+++GYIK+T
Sbjct:  226 VVGEVLGKYHPHGDMAVYDALVRMAQDFVMSAPLIQGHGNFGSIDNDPAAAMRYTECKLSSVAKDTLLTDINLDTVDMTTNFDGNEKEPVVLPSRLPLLLINGATGIAVGMATNIPPHNLGEVVAATIALIRNPELPDDQLFRLLPAPDFPTGGRIMGLAGARKLYTTSNGGVTLRATTHIEVIE-AKGRSRRNAVVVTELPYQVNKSSLLQKMAEMVNDKKLEGISDLRDESDRDGVRVVVELKRDANPQVVENNLFKKTQLQTSFSGNMLALGSDGTKPHRFSLRAAIQSFVDFRFTTVRRRTAFELGKVRAREHIVQGMLQALGMIDAVIELVRASTDTPMARDGLMAEPYGLSQEQADAILALRLGRLTSMEEGKLKAEAEDLKATMERLEGVMNEDSKVMDIIVEELTEAKNKHAVPRRTMIKPDEGELQEEDLLANDSSVVVVTAAGYIKRMPLEEFTAQNRGTRGKAGAKMSSDHDVVQHFFTCQDHDTILFVSDKGVAYGIRAFQVPVGSRTAKGVPVPQVLPIAGDEEIASVLAVDDFREDEYLVLLTQKGYIKRT 789
[Close]
BLAST of mRNA_S-ischiensis_contig84.20079.1 vs. uniprot
Match: W7TLA9_9STRA (DNA topoisomerase (ATP-hydrolyzing) n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TLA9_9STRA)

HSP 1 Score: 747 bits (1928), Expect = 1.280e-259
Identity = 371/566 (65.55%), Postives = 469/566 (82.86%), Query Frame = 1 
Query:    1 MVGEVLGKYHPHGDVAVYDALVRMAQDFVMAAPLIAGHGNFGSVDNDPAAAMRYTECKLAPLSRDALMADVALDTVELVPNFDGNEVEPVVLPARLPMLLLNGATGIAVGMATNIPPHNLGELTEAVLALIRDPDLPDEDLFRIVPAPDFPTGGCIMGLSGARSLYQTSNGGVTVRATTHMEVLEGAKGRPSRNAIVVTELPYMVNKSGLLEKMAGLVNDKKLEGISDLRDESDREGIRVVVELKRDAVPQVVLNNLFKKTQLQISFSGNMLALGDDGKQPQRFTLKAALQSFVEYRFQTVRRRTAFELDKVKTREHIVAGMLLALKDIDNVIEVIRESKDQSKARELLQGEAFGLSLEQADAILGLRLGRLTSMEEDKMEREGKDLRKQIKRLEGIMSEDTSVFDVMEKELEELKSKHAVPRRTIIQPDEGELSEEDLLANDRSVVVVTAAGYIKRMPIEEFTQQGRGTRGKAGAKMSDEDDTVVHFFTCNDHDTVLFVSDRGIAYGIRAFQVPTASRTAKGVPMPQVLPLASEEGITSIMPVSE-FRDDEYLVLLSKQGYIKKT 1695
            +VGEVLGKYHPHGD +VYDALVRMAQDFVM+APL+AGHGNFGSVD+DPAAAMRYTECKL+ L+RDAL+ D+ LDTV+  PNFDGNEVEP+VLPAR+PMLLLNGATGIAVGMATN+PPHNLGE+ +  LALI DP L D+ L R++PAPDFPTGG IMGL G R LY   +G + +RA THME +    GR  RNAIVVTELPY VNK+ LLEK+A +VN+KK+EGISDLRDESDREGIRVV+ELKRDA+P VV NNLFKKT LQ SF GN LAL +DG+QPQR TL+ +LQSF+++RF+T+RRRT  EL K+++R+H+V G++ AL  ID+V+E++R +KD + A+  L G  + +S  QA AIL L LGRLT++E+ K+  E + LR QI+  + +M +D  VFDVM++EL E+++KHAVPRR+ I+   G L+E DLLANDRSV++VT AGYIKRMP+++F QQ RGTRGKAGA+MS +DD V HFF CNDHD V+F+S++G+A+GIRAFQVP ASR +KGVP+PQVLPL+S++ ++S++P+ E F+ DE+LVLL+KQG+IKKT
Sbjct:  193 VVGEVLGKYHPHGDASVYDALVRMAQDFVMSAPLVAGHGNFGSVDDDPAAAMRYTECKLSLLARDALLKDINLDTVDFAPNFDGNEVEPLVLPARVPMLLLNGATGIAVGMATNVPPHNLGEVLDGTLALIEDPSLSDDKLLRLIPAPDFPTGGDIMGLEGPRKLYTNGSGSIVMRAKTHMETIPMGGGRQVRNAIVVTELPYQVNKASLLEKIADMVNEKKMEGISDLRDESDREGIRVVIELKRDAMPSVVENNLFKKTALQSSFPGNFLALANDGRQPQRLTLRESLQSFIDFRFKTIRRRTQHELSKLESRDHVVEGLIRALDRIDDVVELVRRAKDTAAAKATLMGSQYDMSEAQAQAILALTLGRLTALEDAKLRAEREQLRGQIEDFQAMMRQDEKVFDVMKQELREIRAKHAVPRRSSIRAHAGALTELDLLANDRSVMMVTEAGYIKRMPLDDFEQQRRGTRGKAGARMS-QDDLVNHFFACNDHDHVVFISEKGVAFGIRAFQVPVASRVSKGVPLPQVLPLSSDDHVSSVIPLGESFQADEFLVLLTKQGFIKKT 757
[Close]
BLAST of mRNA_S-ischiensis_contig84.20079.1 vs. uniprot
Match: A0A0G4ESH9_VITBC (DNA topoisomerase (ATP-hydrolyzing) n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4ESH9_VITBC)

HSP 1 Score: 740 bits (1911), Expect = 1.400e-257
Identity = 371/569 (65.20%), Postives = 474/569 (83.30%), Query Frame = 1 
Query:    1 MVGEVLGKYHPHGDVAVYDALVRMAQDFVMAAPLIAGHGNFGSVDNDPAAAMRYTECKLAPLSRDALMADVALDTVELVPNFDGNEVEPVVLPARLPMLLLNGATGIAVGMATNIPPHNLGELTEAVLALIRDPDLPDEDLFRIVPAPDFPTGGCIMGLSGARSLYQTSNGGVTVRATTHMEVLE--GAKGRP--SRNAIVVTELPYMVNKSGLLEKMAGLVNDKKLEGISDLRDESDREGIRVVVELKRDAVPQVVLNNLFKKTQLQISFSGNMLALGDDGKQPQRFTLKAALQSFVEYRFQTVRRRTAFELDKVKTREHIVAGMLLALKDIDNVIEVIRESKDQSKARELLQGEAFGLSLEQADAILGLRLGRLTSMEEDKMEREGKDLRKQIKRLEGIMSEDTSVFDVMEKELEELKSKHAVPRRTIIQPDEGELSEEDLLANDRSVVVVTAAGYIKRMPIEEFTQQGRGTRGKAGAKMSDEDDTVVHFFTCNDHDTVLFVSDRGIAYGIRAFQVPTASRTAKGVPMPQVLPLASEEGITSIMPVSEFRDDEYLVLLSKQGYIKKT 1695
            +VGEVLGKYHPHGDVAVYDALVRMAQDFVM+ PL+ GHGNFGSVD DP AAMRYTECKL PLSRDAL+ADV++DTV+ V NFDGNEVEP +LPA+LP LLLNGATGIAVGMATNIPPH LGEL +A +ALI++P L DE LF ++PAPDFPTG  I+GL G R LY+T NG V +RA TH+E ++    KG    SR AIVVTELPYMVNKS LLE+MA +VN+KKLEGI+DLRDESDR+G R+V+ELK+DA   VV NNLFKKTQLQ SF+GN+L+LGDDGKQP R TL++ALQ ++++RF+T+RRRT FEL + K R H+V G+L AL  ID+VI+V+R++KD ++ARE LQG  F LS EQA+A+L L L RLT++EE+K++ E ++LR +I  LE +M ED+ V+ +ME EL+ELK K+   RR+ I  +  +L+EEDL+ NDRSV++VT +GY+KR+P+EEF  Q RGTRGK GAK+SD DD+V HFF CNDHDT+LFVS+RG+A+ ++A+QVP +SRTA+GVP+PQVLP+A+++ ITS++P+++F++DEYLVLL+K+G+IKKT
Sbjct:   86 VVGEVLGKYHPHGDVAVYDALVRMAQDFVMSGPLVNGHGNFGSVDGDPPAAMRYTECKLTPLSRDALLADVSMDTVDFVANFDGNEVEPTILPAKLPFLLLNGATGIAVGMATNIPPHQLGELVDACIALIKNPSLSDERLFSLIPAPDFPTGALIVGLEGVRKLYKTGNGAVVMRARTHVEEIKKTNRKGGQLGSRTAIVVTELPYMVNKSVLLERMATMVNEKKLEGIADLRDESDRDGTRIVIELKKDARATVVQNNLFKKTQLQTSFAGNLLSLGDDGKQPVRLTLRSALQIWLDFRFRTIRRRTNFELGRRKQRAHVVEGLLKALAQIDDVIDVVRQAKDANQAREALQGSPFDLSEEQAEALLRLTLARLTALEEEKLKTELEELRARISELEALMREDSKVYHLMETELKELKRKYGGQRRSEIIHEAADLTEEDLIPNDRSVLIVTHSGYVKRLPVEEFDPQSRGTRGKLGAKISD-DDSVAHFFACNDHDTLLFVSNRGVAFTVKAYQVPLSSRTARGVPLPQVLPIAADDRITSVLPITQFKEDEYLVLLTKKGWIKKT 653
[Close]
BLAST of mRNA_S-ischiensis_contig84.20079.1 vs. uniprot
Match: A0A7S4VAS9_9STRA (DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VAS9_9STRA)

HSP 1 Score: 666 bits (1719), Expect = 1.280e-228
Identity = 351/574 (61.15%), Postives = 437/574 (76.13%), Query Frame = 1 
Query:    1 MVGEVLGKYHPHGDVAVYDALVRMAQDFVMAAPLIAGHGNFGSVDNDPAAAMRYTECKLAPLSRDALMADVALDTVELVPNFDGNEVEPVVLPARLPMLLLNGATGIAVGMATNIPPHNLGELTEAVLALI--RDP--DLPDEDLFRIVPAPDFPTGGCIMGLSGARSLYQTSNGGVTVRATTHMEVLEGAKGRPS-RNAIVVTELPYMVNKSGLLEKMAGLVNDKKLEGISDLRDESDREGIRVVVELKRDAVPQVVLNNLFKKTQLQISFSGNMLALGDDGKQPQRFTLKAALQSFVEYRFQTVRRRTAFELDKVKTREHIVAGMLLALKDIDNVIEVIRESKDQSKAR-ELLQ--GEAFGLSLEQADAILGLRLGRLTSMEEDKMEREGKDLRKQIKRLEGIMSEDTSVFDVMEKELEELKSKHAVPRRTIIQPDEGELSEEDLLANDRSVVVVTAAGYIKRMPIEEFTQQGRGTRGKAGAKMS-DEDDTVVHFFTCNDHDTVLFVSDRGIAYGIRAFQVPTASRTAKGVPMPQVLPLASEEGITSIMPVSEFRDDEYLVLLSKQGYIKKT 1695
            +VGEVLGKYHPHGD AVYDALVRMAQ F    PLI GHGNFGS+D DP AAMRYTEC+L  ++ +AL+ D+  DTV+ + NFDGNE+EP VLPA+LP+LLLNG +GIAVGMATN+PPHNL EL +A +A+I  RD   ++ D++L RIVP PDFPTG  IMG+S  + LY T NGG+ VRA TH+E   G  GR S + AIVVTELPY VNK+GLLEK+A LVNDKKLEGISDLRDESDR+GIRVV+ELKRDAVP VV NNLFKKT LQ +FSGN LAL   G  P+RFTL++AL  F+++R +T+RRR+AF+L +VK R HIV G+LLAL  ID VIE+IR + DQ  AR EL+    E   LS EQADA+L L+LG+LT + + K+  E K L    K LE ++S+D +V D+M  E E LK    +PRRT I+ DEGEL++ DL+ N RSV+VVT  GYIKR+P++ F  QGRGTRGK     +  +D+ V H FTCNDHDT+L V+ +GIAYG+RAFQVP ASRTA+GVP+P VLP+ +++ ITSI+PV+EF  DE+ VL ++ G+IKKT
Sbjct:  187 VVGEVLGKYHPHGDTAVYDALVRMAQSFSTGTPLIDGHGNFGSIDADPPAAMRYTECRLTKVATNALLDDITSDTVDFISNFDGNEMEPTVLPAKLPLLLLNGCSGIAVGMATNVPPHNLNELMDACIAMIDARDEGEEVSDQELVRIVPGPDFPTGASIMGMSNIKQLYTTGNGGIVVRAVTHVET--GGDGRKSGKTAIVVTELPYQVNKAGLLEKIATLVNDKKLEGISDLRDESDRDGIRVVIELKRDAVPAVVQNNLFKKTPLQTTFSGNFLALMGSGTVPRRFTLRSALDCFLDFRIETIRRRSAFQLRRVKNRAHIVDGLLLALNVIDEVIEIIRSAPDQMTARVELMDPGNERLSLSREQADAVLRLQLGQLTRLNKGKLTDERKTLEASRKELEKLLSDDNAVRDLMRDEFENLKGTFGIPRRTKIEADEGELNDIDLIRNSRSVIVVTRGGYIKRLPLKTFESQGRGTRGKKSTTSNASQDNEVAHCFTCNDHDTLLMVTQKGIAYGLRAFQVPAASRTARGVPIPSVLPVKADDVITSILPVAEFTKDEFCVLATENGWIKKT 758
[Close]
BLAST of mRNA_S-ischiensis_contig84.20079.1 vs. uniprot
Match: A0A7S4MTJ4_9STRA (DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MTJ4_9STRA)

HSP 1 Score: 660 bits (1703), Expect = 4.110e-226
Identity = 343/581 (59.04%), Postives = 434/581 (74.70%), Query Frame = 1 
Query:    1 MVGEVLGKYHPHGDVAVYDALVRMAQDFVMAAPLIAGHGNFGSVDNDPAAAMRYTECKLAPLSRDALMADVALDTVELVPNFDGNEVEPVVLPARLPMLLLNGATGIAVGMATNIPPHNLGELTEAVLALIR-----DPDLPDEDLFRIVPAPDFPTGGCIMGLSGARSLYQTSNGGVTVRATTHMEVLEGAKGRPSRNAIVVTELPYMVNKSGLLEKMAGLVNDKKLEGISDLRDESDREGIRVVVELKRDAVPQVVLNNLFKKTQLQISFSGNMLALGDDGKQPQRFTLKAALQSFVEYRFQTVRRRTAFELDKVKTREHIVAGMLLALKDIDNVIEVIRESKDQSKARELLQGEA----FGLSLEQADAILGLRLGRLTSMEEDKMEREGKDLRKQIKRLEGIMSEDTSVFDVMEKELEELKSKHAVPRRTIIQPDEGELSEEDLLANDRSVVVVTAAGYIKRMPIEEFTQQGRGTRGKAGAKM-------SDEDDTVVHFFTCNDHDTVLFVSDRGIAYGIRAFQVPTASRTAKGVPMPQVLPLASEEGITSIMPVSEFRDDEYLVLLSKQGYIKKT 1695
            +VGEVLGKYHPHGD AVYDALVRMAQDF    PLI GHGNFGSVD DPAAAMRYTEC+L P+S +AL+ D+  D V+ +PNFDGNE EP VLPARLP+LLLNG  GIAVGMATN+PPHNLGEL +A +AL         +L D  L+R+VP PDFPTG  IMG SG++ LY T NGGV VRA TH+E +    G+P R+AIVVTELPY VNK+ LLE++A +VN+KK+EG++DLRDESDR+GIRVV+ELKRDAV  VV NNLFKKT LQ SFSGN LAL   G  PQRFTL++AL +F+++RF+T+RRR+A++L KV  R HIV G+L AL   D+VIE +R + DQ+ AR+ L  +      GLS +QADA+L L+LG+LT + + K+  E   L +    LE ++  D++V  +M  E  +LK K  VPRRT I+P+EGEL+E DL+ N RSV+VVT  GY+KRMP++ F  Q RGTRGK G          S ED+ V H FTCNDHDT+L V+ RGIAYG+RAF+VPT +RTAKGVP+P VLP+ +++ +TS++ +S F +DEY VL +++G+IKKT
Sbjct:  181 VVGEVLGKYHPHGDGAVYDALVRMAQDFSTGTPLIDGHGNFGSVDADPAAAMRYTECRLTPVSNEALLGDLGRDAVDFIPNFDGNEAEPTVLPARLPVLLLNGCAGIAVGMATNVPPHNLGELMDACVALTHAAEDGQDELSDGALYRLVPGPDFPTGARIMGTSGSKKLYSTGNGGVVVRAVTHVEQIVSKGGKP-RSAIVVTELPYQVNKAALLERIADMVNEKKIEGVADLRDESDRDGIRVVIELKRDAVAAVVQNNLFKKTSLQTSFSGNFLALMGSGTIPQRFTLRSALDTFLDFRFKTIRRRSAYQLKKVDARIHIVEGLLKALARADDVIETVRSAPDQASARDALMDDTGDDGLGLSRDQADAVLKLQLGQLTRLNKSKLLDEKDTLSRSKAELEELLEVDSAVRSLMMDEFRDLKDKFGVPRRTQIEPEEGELNEIDLVKNSRSVIVVTRGGYVKRMPLKTFGSQKRGTRGKKGTSSAATAGSASAEDNEVSHCFTCNDHDTLLMVTQRGIAYGVRAFEVPTGTRTAKGVPIPSVLPVKADDVVTSVLTLSSFSEDEYAVLATERGWIKKT 760
[Close]
BLAST of mRNA_S-ischiensis_contig84.20079.1 vs. uniprot
Match: K9W8V1_9CYAN (DNA gyrase subunit A n=3 Tax=Oscillatoriales TaxID=1150 RepID=K9W8V1_9CYAN)

HSP 1 Score: 653 bits (1685), Expect = 1.030e-224
Identity = 321/566 (56.71%), Postives = 442/566 (78.09%), Query Frame = 1 
Query:    1 MVGEVLGKYHPHGDVAVYDALVRMAQDFVMAAPLIAGHGNFGSVDNDPAAAMRYTECKLAPLSRDALMADVALDTVELVPNFDGNEVEPVVLPARLPMLLLNGATGIAVGMATNIPPHNLGELTEAVLALIRDPDLPDEDLFRIVPAPDFPTGGCIMGLSGARSLYQTSNGGVTVRATTHMEVLEGAKGRPSRNAIVVTELPYMVNKSGLLEKMAGLVNDKKLEGISDLRDESDREGIRVVVELKRDAVPQVVLNNLFKKTQLQISFSGNMLALGDDGKQPQRFTLKAALQSFVEYRFQTVRRRTAFELDKVKTREHIVAGMLLALKDIDNVIEVIRESKDQSKARELLQGEAFGLSLEQADAILGLRLGRLTSMEEDKMEREGKDLRKQIKRLEGIMSEDTSVFDVMEKELEELKSKHAVPRRTIIQPDEGELSEEDLLANDRSVVVVTAAGYIKRMPIEEFTQQGRGTRGKAGAKMSDEDDTVVHFFTCNDHDTVLFVSDRGIAYGIRAFQVPTASRTAKGVPMPQVLPLASEEGITSIMPVSEFRDDEYLVLLSKQGYIKKTA 1698
            +VGEVLGKYHPHGD AVYDALVRMAQDF M APLI GHGNFGSVDNDP AAMRYTEC+L P++ DA++ D+  +TV+ + NFDG++ EP VLPAR+P LLLNG++GIAVGMATNIPPHNLGEL + VLALI +PD+ D +L R +P PDFPTGG I+G +G +  + T  G +T+R    +E +E  +GRP R AI++TELPY  NK+ L+EK+A +VNDK++EGISD+RDESDR+G+R+V+ELKRDA P+VVLNNL+K+T +Q++F  NMLAL ++  +PQ  +LK  L  F+++R +T+ RRT +EL K + R+HI+ G+L+AL ++D +I++IR + D   A+  L  E +GLS  QADAIL ++L RLT++E +K++ E ++L+ +I  LE I++  + + +++E E+ +LK+ HA PRRTIIQP EGE+ + DL+AN+++V+++T  GYIKRM + EF  Q R TRGKAG +M  EDD V HF TC DHD++LF S+RG+ Y ++A+ +P+ASRTA+GVP+ Q+LP+  EE ITSI+PVSEF D EYLV+L+++GYIKKTA
Sbjct:   69 VVGEVLGKYHPHGDTAVYDALVRMAQDFSMRAPLINGHGNFGSVDNDPPAAMRYTECRLRPIATDAMLRDIESETVDFIDNFDGSQQEPTVLPARIPQLLLNGSSGIAVGMATNIPPHNLGELIDGVLALIHNPDITDLELMRYIPGPDFPTGGQILGTAGIKEAFTTGRGSITMRGVAQIETIEH-RGRPDREAIIITELPYQTNKAALIEKIAEMVNDKRIEGISDIRDESDRDGMRIVIELKRDAYPRVVLNNLYKQTPIQMNFGANMLALVNN--EPQLLSLKKFLSVFLDFRIETITRRTQYELRKAQERDHILQGLLIALGNLDRIIQLIRHAADTPTAKAELM-EVYGLSEAQADAILQMQLRRLTALEAEKIQAEHEELQARIADLEDILARRSRILEIIETEVNQLKATHATPRRTIIQPMEGEIDDTDLIANEKAVILLTEQGYIKRMAVNEFGAQARATRGKAGTRMK-EDDGVEHFLTCCDHDSILFFSERGVTYCLKAYHIPSASRTARGVPIVQLLPIPREEKITSIVPVSEFTDHEYLVMLTRKGYIKKTA 629
[Close]
BLAST of mRNA_S-ischiensis_contig84.20079.1 vs. uniprot
Match: A0A7C9U2K2_9CYAN (DNA gyrase subunit A n=1 Tax=Oscillatoria sp. SIO1A7 TaxID=2607767 RepID=A0A7C9U2K2_9CYAN)

HSP 1 Score: 649 bits (1674), Expect = 1.940e-222
Identity = 322/566 (56.89%), Postives = 443/566 (78.27%), Query Frame = 1 
Query:    1 MVGEVLGKYHPHGDVAVYDALVRMAQDFVMAAPLIAGHGNFGSVDNDPAAAMRYTECKLAPLSRDALMADVALDTVELVPNFDGNEVEPVVLPARLPMLLLNGATGIAVGMATNIPPHNLGELTEAVLALIRDPDLPDEDLFRIVPAPDFPTGGCIMGLSGARSLYQTSNGGVTVRATTHMEVLEGAKGRPSRNAIVVTELPYMVNKSGLLEKMAGLVNDKKLEGISDLRDESDREGIRVVVELKRDAVPQVVLNNLFKKTQLQISFSGNMLALGDDGKQPQRFTLKAALQSFVEYRFQTVRRRTAFELDKVKTREHIVAGMLLALKDIDNVIEVIRESKDQSKARELLQGEAFGLSLEQADAILGLRLGRLTSMEEDKMEREGKDLRKQIKRLEGIMSEDTSVFDVMEKELEELKSKHAVPRRTIIQPDEGELSEEDLLANDRSVVVVTAAGYIKRMPIEEFTQQGRGTRGKAGAKMSDEDDTVVHFFTCNDHDTVLFVSDRGIAYGIRAFQVPTASRTAKGVPMPQVLPLASEEGITSIMPVSEFRDDEYLVLLSKQGYIKKTA 1698
            +VGEVLGKYHPHGD AVYDALVRMAQDF M +PLI GHGNFGS+DNDP AAMRYTEC+L  +S DA++ D+  +TV+   NFDG++ EPVVLPAR+P LLLNG++GIAVGMATNIPPHNLGEL + ++ALI++P++ + +L + +P PDFPTGG I+G+SG R  Y T  G +T+R    +EVLE  +GRP ++AI+VTELPY  NK+ ++EK+A LVNDK++EGISD+RDESDR+G+R+V+ELKRDA P+VVLNNL+K+T LQ +F  NMLAL +   +PQ  T+K  L+ F+++R + + RRT +EL K + R+H++ G+L+AL+++D++I++IR S D + AR+ L  E++GLS  QADAIL ++L RLT++E +K+++E ++L+  I  L+ I++    +  ++E E++ELK K A PRRT I+  EGE+ E DL+AN++++V++T  GY+KRMP+  F  Q R TRGK+G KM  EDD V HF TC DHD VLF SDRG+ Y + A+Q+PT+SRTA+GVP+ Q+LP+  +E ITSI+PVSEF DDEYLV+L+K GYIKKTA
Sbjct:   69 VVGEVLGKYHPHGDTAVYDALVRMAQDFSMRSPLIRGHGNFGSIDNDPPAAMRYTECRLDAVSTDAMLRDIDSETVDFADNFDGSQQEPVVLPARIPQLLLNGSSGIAVGMATNIPPHNLGELIDGLVALIQNPEITNSELRQHIPGPDFPTGGQILGVSGIRDAYTTGRGSITMRGVATIEVLE-QRGRPDKDAIIVTELPYQTNKAAMIEKIADLVNDKRIEGISDIRDESDRDGMRIVIELKRDAYPRVVLNNLYKQTPLQSNFGANMLALVNG--EPQLLTIKRFLEVFLDFRIEAITRRTQYELRKAEERDHLLVGLLIALENLDSIIQIIRHSADTASARQELI-ESYGLSEAQADAILQMQLRRLTALEAEKIQKEHEELQAVIADLKDILARRERILAIIETEVKELKEKFATPRRTRIEHAEGEIDETDLIANEKAIVLLTEQGYLKRMPLNAFEAQSRATRGKSGTKMK-EDDVVEHFLTCCDHDKVLFFSDRGVVYSLNAYQIPTSSRTARGVPIVQMLPIPHDEKITSIVPVSEFSDDEYLVMLTKGGYIKKTA 629
[Close]
BLAST of mRNA_S-ischiensis_contig84.20079.1 vs. uniprot
Match: B4VPJ9_9CYAN (DNA gyrase subunit A n=3 Tax=Coleofasciculus chthonoplastes TaxID=64178 RepID=B4VPJ9_9CYAN)

HSP 1 Score: 644 bits (1661), Expect = 1.510e-221
Identity = 322/566 (56.89%), Postives = 437/566 (77.21%), Query Frame = 1 
Query:    1 MVGEVLGKYHPHGDVAVYDALVRMAQDFVMAAPLIAGHGNFGSVDNDPAAAMRYTECKLAPLSRDALMADVALDTVELVPNFDGNEVEPVVLPARLPMLLLNGATGIAVGMATNIPPHNLGELTEAVLALIRDPDLPDEDLFRIVPAPDFPTGGCIMGLSGARSLYQTSNGGVTVRATTHMEVLEGAKGRPSRNAIVVTELPYMVNKSGLLEKMAGLVNDKKLEGISDLRDESDREGIRVVVELKRDAVPQVVLNNLFKKTQLQISFSGNMLALGDDGKQPQRFTLKAALQSFVEYRFQTVRRRTAFELDKVKTREHIVAGMLLALKDIDNVIEVIRESKDQSKARELLQGEAFGLSLEQADAILGLRLGRLTSMEEDKMEREGKDLRKQIKRLEGIMSEDTSVFDVMEKELEELKSKHAVPRRTIIQPDEGELSEEDLLANDRSVVVVTAAGYIKRMPIEEFTQQGRGTRGKAGAKMSDEDDTVVHFFTCNDHDTVLFVSDRGIAYGIRAFQVPTASRTAKGVPMPQVLPLASEEGITSIMPVSEFRDDEYLVLLSKQGYIKKTA 1698
            +VGEVLGKYHPHGD AVYDALVRMAQDF M +PLI GHGNFGSVDNDP AAMRYTEC+L  L+ D+L+ D+  +TV+ + NFDG++ EP+VLPAR+P +LLNG++GIAVGMATNIPPHNLGEL + ++ALI +P++ +++L + +PAPDFPTGG I+G SG +  Y T  G +T+R    +E +E  +GRP + AI+VTELPY  NK+ L+EK+A +VNDK++EGISD+RDESDR G+RVV+ELKRDA P+VVLNNL+K+T LQ +F  NMLAL   G +PQ  T+K  L+ F+E+R +T+ RRT +EL K + R+H++ G+L+AL ++D VI VIR + D + A+  L  E FGLS  QADAIL ++L RLT++E  K++ E ++L+ +I  L+ I++  + + +++E E  ++K+ H  PRRT IQ  EGEL + DL+AN+++V++VT  GYIKRMPI  F  Q R TRGKA A+M  EDD V HF TC DHD++LF SDRG+ Y +RA+Q+P ASRTA+GVP+ Q+LP+  +E ITS++PVSEF DD YLV+L+++GYIKKTA
Sbjct:   44 VVGEVLGKYHPHGDTAVYDALVRMAQDFSMRSPLINGHGNFGSVDNDPPAAMRYTECRLQSLATDSLLRDIESETVDFLDNFDGSQQEPIVLPARVPQILLNGSSGIAVGMATNIPPHNLGELVDGLVALIHNPEITEKELMQYIPAPDFPTGGQILGRSGIKDAYTTGRGSITMRGVAQVETIEH-RGRPDKEAIIVTELPYQTNKAALIEKIAEMVNDKRIEGISDIRDESDRRGMRVVIELKRDAYPRVVLNNLYKQTPLQSNFGANMLALV--GNEPQLLTIKQFLEVFLEFRIETITRRTQYELRKAEERDHLLQGLLIALDNLDAVIAVIRAANDTATAKSQLI-EQFGLSEPQADAILQMQLRRLTALEAQKIQAEHEELQVRIADLQDILANRSRILEIIETEALQIKTTHDTPRRTAIQEVEGELDDIDLIANEKAVILVTEQGYIKRMPIHSFAAQARATRGKAAARMK-EDDGVEHFLTCCDHDSLLFFSDRGVVYSLRAYQIPAASRTARGVPIVQMLPIPHDEKITSVVPVSEFTDDVYLVMLTRKGYIKKTA 604
[Close]
BLAST of mRNA_S-ischiensis_contig84.20079.1 vs. uniprot
Match: A0A7S2L1C7_9STRA (DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2L1C7_9STRA)

HSP 1 Score: 639 bits (1649), Expect = 2.460e-220
Identity = 328/573 (57.24%), Postives = 421/573 (73.47%), Query Frame = 1 
Query:    1 MVGEVLGKYHPHGDVAVYDALVRMAQDFVMAAPLIAGHGNFGSVDNDPAAAMRYTECKLAPLSRDALMADVALDTVELVPNFDGNEVEPVVLPARLPMLLLNGATGIAVGMATNIPPHNLGELTEAVLALIR-----DPDLPDEDLFRIVPAPDFPTGGCIMGLSGARSLYQTSNGGVTVRATTHMEVLEGAKGRPSRNAIVVTELPYMVNKSGLLEKMAGLVNDKKLEGISDLRDESDREGIRVVVELKRDAVPQVVLNNLFKKTQLQISFSGNMLALGDDGKQPQRFTLKAALQSFVEYRFQTVRRRTAFELDKVKTREHIVAGMLLALKDIDNVIEVIRESKDQSKARELL---QGEAFGLSLEQADAILGLRLGRLTSMEEDKMEREGKDLRKQIKRLEGIMSEDTSVFDVMEKELEELKSKHAVPRRTIIQPDEGELSEEDLLANDRSVVVVTAAGYIKRMPIEEFTQQGRGTRGKAGAKMSDEDDTVVHFFTCNDHDTVLFVSDRGIAYGIRAFQVPTASRTAKGVPMPQVLPLASEEGITSIMPVSEFRDDEYLVLLSKQGYIKKT 1695
            +VGEVLGKYHPHGD AVYDALVR+AQDF   APLI GHGNFGS+D DPAAAMRYTECKL+ L+ + L+ D+ +DTVE +PNFDGNE EP VLPA++P+LLLNG  GIAVGMATNIPPHNL EL  A + + +     + ++ D  L R++P PDFPT   I+G SGAR L+ T NGG+ +RA  H+E + G K +  RNAI+V+ELPY VNK+ L+E++A LVN+KKL+GI+DLRDESDR+GIRVV+ELKRDAV  VV NNLFKKT LQ +FSGN LAL   G  PQRFTL+ AL  F+++RFQT+R +  F+LDKV+ R HIV G+LLAL   D VIE++R + DQ+ AR  L   +   F LS  Q DA+L L+LG+LT +  DK+  E K L +    L  +++ D +V D M +E E +K K  VPRR+ I PDEGE  E DL+ N+RSV+VVT  GYIKRMP++ F  Q RGTRGK G   + +D+ V H FTCNDHDT+L  +  GIAYG+R +QVP   RTAKG P+P VLP+ +++ +TS++PVS+F  DE++VL ++ G+IKKT
Sbjct:   28 VVGEVLGKYHPHGDNAVYDALVRLAQDFSTNAPLIDGHGNFGSIDADPAAAMRYTECKLSKLAAETLLDDINMDTVEFLPNFDGNEYEPSVLPAKVPLLLLNGGAGIAVGMATNIPPHNLEELMTACMTMTKSRNEGEEEVTDNALMRMIPGPDFPTAATIIGKSGARKLFTTGNGGIVMRAVMHLEQVMGKKSK--RNAIIVSELPYQVNKAALMERIATLVNEKKLDGIADLRDESDRDGIRVVIELKRDAVAAVVQNNLFKKTPLQTTFSGNFLALFGSGTVPQRFTLREALDCFLDFRFQTIRNKCVFQLDKVENRIHIVEGLLLALDYTDEVIEIVRGAPDQASARAALMDPENTRFCLSSAQTDAVLKLQLGQLTRLNGDKLTDERKTLAESQASLRDLLTSDKTVHDTMVEEFEAIKKKFGVPRRSKILPDEGEKEEIDLVQNERSVIVVTRGGYIKRMPLKTFESQNRGTRGKKGTSSATDDNEVAHCFTCNDHDTILMTTQSGIAYGLRGYQVPEGGRTAKGAPIPSVLPVKADDVVTSVLPVSQFSSDEFIVLATEFGWIKKT 598
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig84.20079.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CKD9_9STRA2.070e-29373.50DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Tribon... [more]
A0A6H5KKP9_9PHAE4.520e-29374.34DNA topoisomerase (ATP-hydrolyzing) n=2 Tax=Ectoca... [more]
W7TLA9_9STRA1.280e-25965.55DNA topoisomerase (ATP-hydrolyzing) n=2 Tax=Monodo... [more]
A0A0G4ESH9_VITBC1.400e-25765.20DNA topoisomerase (ATP-hydrolyzing) n=2 Tax=Vitrel... [more]
A0A7S4VAS9_9STRA1.280e-22861.15DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Ditylu... [more]
A0A7S4MTJ4_9STRA4.110e-22659.04DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Odonte... [more]
K9W8V1_9CYAN1.030e-22456.71DNA gyrase subunit A n=3 Tax=Oscillatoriales TaxID... [more]
A0A7C9U2K2_9CYAN1.940e-22256.89DNA gyrase subunit A n=1 Tax=Oscillatoria sp. SIO1... [more]
B4VPJ9_9CYAN1.510e-22156.89DNA gyrase subunit A n=3 Tax=Coleofasciculus chtho... [more]
A0A7S2L1C7_9STRA2.460e-22057.24DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Skelet... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig84contigS-ischiensis_contig84:518298..532579 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score840.1
Seed ortholog evalue6e-241
Seed eggNOG ortholog2880.D8LPZ0
Preferred nameGYRA
KEGG koko:K02469,ko:K03164
KEGG Pathwayko01524,map01524
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0009295,GO:0009507,GO:0009536,GO:0016592,GO:0031974,GO:0031981,GO:0032991,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0070013
EggNOG free text desc.DNA topoisomerase type II (ATP-hydrolyzing) activity
EggNOG OGsCOG0187@1,KOG0355@2759
Ec32 ortholog descriptionDNA gyrase subunit A
Ec32 orthologEc-15_001600.1
EC5.99.1.3
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03032,ko03036,ko03400
Hectar predicted targeting categoryother localisation
Exons15
Model size1699
Cds size1698
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817337.6071959-CDS-S-ischiensis_contig84:518297..5183211622817337.6071959-CDS-S-ischiensis_contig84:518297..518321Schizocladia ischiensis KU_0333CDSS-ischiensis_contig84 518298..518321 -
1695741038.2208018-CDS-S-ischiensis_contig84:518297..5183211695741038.2208018-CDS-S-ischiensis_contig84:518297..518321Schizocladia ischiensis KU_0333CDSS-ischiensis_contig84 518298..518321 -
1622817337.6182082-CDS-S-ischiensis_contig84:519522..5196121622817337.6182082-CDS-S-ischiensis_contig84:519522..519612Schizocladia ischiensis KU_0333CDSS-ischiensis_contig84 519523..519612 -
1695741038.2343187-CDS-S-ischiensis_contig84:519522..5196121695741038.2343187-CDS-S-ischiensis_contig84:519522..519612Schizocladia ischiensis KU_0333CDSS-ischiensis_contig84 519523..519612 -
1622817337.629096-CDS-S-ischiensis_contig84:520906..5210141622817337.629096-CDS-S-ischiensis_contig84:520906..521014Schizocladia ischiensis KU_0333CDSS-ischiensis_contig84 520907..521014 -
1695741038.2450716-CDS-S-ischiensis_contig84:520906..5210141695741038.2450716-CDS-S-ischiensis_contig84:520906..521014Schizocladia ischiensis KU_0333CDSS-ischiensis_contig84 520907..521014 -
1622817337.64046-CDS-S-ischiensis_contig84:522056..5222381622817337.64046-CDS-S-ischiensis_contig84:522056..522238Schizocladia ischiensis KU_0333CDSS-ischiensis_contig84 522057..522238 -
1695741038.2635694-CDS-S-ischiensis_contig84:522056..5222381695741038.2635694-CDS-S-ischiensis_contig84:522056..522238Schizocladia ischiensis KU_0333CDSS-ischiensis_contig84 522057..522238 -
1622817337.6522923-CDS-S-ischiensis_contig84:523091..5232071622817337.6522923-CDS-S-ischiensis_contig84:523091..523207Schizocladia ischiensis KU_0333CDSS-ischiensis_contig84 523092..523207 -
1695741038.2723298-CDS-S-ischiensis_contig84:523091..5232071695741038.2723298-CDS-S-ischiensis_contig84:523091..523207Schizocladia ischiensis KU_0333CDSS-ischiensis_contig84 523092..523207 -
1622817337.6665568-CDS-S-ischiensis_contig84:524126..5242881622817337.6665568-CDS-S-ischiensis_contig84:524126..524288Schizocladia ischiensis KU_0333CDSS-ischiensis_contig84 524127..524288 -
1695741038.2811291-CDS-S-ischiensis_contig84:524126..5242881695741038.2811291-CDS-S-ischiensis_contig84:524126..524288Schizocladia ischiensis KU_0333CDSS-ischiensis_contig84 524127..524288 -
1622817337.6795785-CDS-S-ischiensis_contig84:525226..5253091622817337.6795785-CDS-S-ischiensis_contig84:525226..525309Schizocladia ischiensis KU_0333CDSS-ischiensis_contig84 525227..525309 -
1695741038.2917464-CDS-S-ischiensis_contig84:525226..5253091695741038.2917464-CDS-S-ischiensis_contig84:525226..525309Schizocladia ischiensis KU_0333CDSS-ischiensis_contig84 525227..525309 -
1622817337.691611-CDS-S-ischiensis_contig84:526056..5262361622817337.691611-CDS-S-ischiensis_contig84:526056..526236Schizocladia ischiensis KU_0333CDSS-ischiensis_contig84 526057..526236 -
1695741038.3058136-CDS-S-ischiensis_contig84:526056..5262361695741038.3058136-CDS-S-ischiensis_contig84:526056..526236Schizocladia ischiensis KU_0333CDSS-ischiensis_contig84 526057..526236 -
1622817337.7025578-CDS-S-ischiensis_contig84:526680..5267391622817337.7025578-CDS-S-ischiensis_contig84:526680..526739Schizocladia ischiensis KU_0333CDSS-ischiensis_contig84 526681..526739 -
1695741038.3217142-CDS-S-ischiensis_contig84:526680..5267391695741038.3217142-CDS-S-ischiensis_contig84:526680..526739Schizocladia ischiensis KU_0333CDSS-ischiensis_contig84 526681..526739 -
1622817337.714672-CDS-S-ischiensis_contig84:528767..5287951622817337.714672-CDS-S-ischiensis_contig84:528767..528795Schizocladia ischiensis KU_0333CDSS-ischiensis_contig84 528768..528795 -
1695741038.332221-CDS-S-ischiensis_contig84:528767..5287951695741038.332221-CDS-S-ischiensis_contig84:528767..528795Schizocladia ischiensis KU_0333CDSS-ischiensis_contig84 528768..528795 -
1622817337.725273-CDS-S-ischiensis_contig84:529379..5295851622817337.725273-CDS-S-ischiensis_contig84:529379..529585Schizocladia ischiensis KU_0333CDSS-ischiensis_contig84 529380..529585 -
1695741038.3441405-CDS-S-ischiensis_contig84:529379..5295851695741038.3441405-CDS-S-ischiensis_contig84:529379..529585Schizocladia ischiensis KU_0333CDSS-ischiensis_contig84 529380..529585 -
1622817337.7374587-CDS-S-ischiensis_contig84:530177..5303461622817337.7374587-CDS-S-ischiensis_contig84:530177..530346Schizocladia ischiensis KU_0333CDSS-ischiensis_contig84 530178..530346 -
1695741038.3580322-CDS-S-ischiensis_contig84:530177..5303461695741038.3580322-CDS-S-ischiensis_contig84:530177..530346Schizocladia ischiensis KU_0333CDSS-ischiensis_contig84 530178..530346 -
1622817337.7515652-CDS-S-ischiensis_contig84:531302..5314251622817337.7515652-CDS-S-ischiensis_contig84:531302..531425Schizocladia ischiensis KU_0333CDSS-ischiensis_contig84 531303..531425 -
1695741038.3677742-CDS-S-ischiensis_contig84:531302..5314251695741038.3677742-CDS-S-ischiensis_contig84:531302..531425Schizocladia ischiensis KU_0333CDSS-ischiensis_contig84 531303..531425 -
1622817337.767373-CDS-S-ischiensis_contig84:531953..5320841622817337.767373-CDS-S-ischiensis_contig84:531953..532084Schizocladia ischiensis KU_0333CDSS-ischiensis_contig84 531954..532084 -
1695741038.3807564-CDS-S-ischiensis_contig84:531953..5320841695741038.3807564-CDS-S-ischiensis_contig84:531953..532084Schizocladia ischiensis KU_0333CDSS-ischiensis_contig84 531954..532084 -
1622817337.7816246-CDS-S-ischiensis_contig84:532542..5325791622817337.7816246-CDS-S-ischiensis_contig84:532542..532579Schizocladia ischiensis KU_0333CDSS-ischiensis_contig84 532543..532579 -
1695741038.4004223-CDS-S-ischiensis_contig84:532542..5325791695741038.4004223-CDS-S-ischiensis_contig84:532542..532579Schizocladia ischiensis KU_0333CDSS-ischiensis_contig84 532543..532579 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig84.20079.1prot_S-ischiensis_contig84.20079.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig84 518298..532579 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig84.20079.1

>prot_S-ischiensis_contig84.20079.1 ID=prot_S-ischiensis_contig84.20079.1|Name=mRNA_S-ischiensis_contig84.20079.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=566bp
MVGEVLGKYHPHGDVAVYDALVRMAQDFVMAAPLIAGHGNFGSVDNDPAA
AMRYTECKLAPLSRDALMADVALDTVELVPNFDGNEVEPVVLPARLPMLL
LNGATGIAVGMATNIPPHNLGELTEAVLALIRDPDLPDEDLFRIVPAPDF
PTGGCIMGLSGARSLYQTSNGGVTVRATTHMEVLEGAKGRPSRNAIVVTE
LPYMVNKSGLLEKMAGLVNDKKLEGISDLRDESDREGIRVVVELKRDAVP
QVVLNNLFKKTQLQISFSGNMLALGDDGKQPQRFTLKAALQSFVEYRFQT
VRRRTAFELDKVKTREHIVAGMLLALKDIDNVIEVIRESKDQSKARELLQ
GEAFGLSLEQADAILGLRLGRLTSMEEDKMEREGKDLRKQIKRLEGIMSE
DTSVFDVMEKELEELKSKHAVPRRTIIQPDEGELSEEDLLANDRSVVVVT
AAGYIKRMPIEEFTQQGRGTRGKAGAKMSDEDDTVVHFFTCNDHDTVLFV
SDRGIAYGIRAFQVPTASRTAKGVPMPQVLPLASEEGITSIMPVSEFRDD
EYLVLLSKQGYIKKTA
back to top

mRNA from alignment at S-ischiensis_contig84:518298..532579-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig84.20079.1 ID=mRNA_S-ischiensis_contig84.20079.1|Name=mRNA_S-ischiensis_contig84.20079.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=14282bp|location=Sequence derived from alignment at S-ischiensis_contig84:518298..532579- (Schizocladia ischiensis KU_0333)
ATGGTGGGGGAGGTGTTGGGCAAGTACCACCCGCACGGTGAGAGGGGGGG
CACCAGCAGTGGTGGAATATCGGTCAGTACTGTAGATAGTTTTCGGGCTC
GACTGATTTTGTGGGTGGGTTGCTACTGTAGCTACAGTACTTGGATTGAG
GGTGGGTCAAACTGTCGAATATCGACTATCGATAGATATATAGATCAGCA
CTGTCGATAAATAGGTACTCGAGTAGGTTGATTTGCTTGGGCATTCCATC
ACTGGGCGCTAGACTGAGAAAGCGCGCGAGTGAGGAGGGATCCACGTCAC
CAATGACCTCAAGAGCGGAGAGACGATAGCAGGGCTTCGGGCCGAAAATG
CGGACCTGCGCCATGCGGGCCAAGGATCACATACTACGCCCCCGGGTTTC
GCGTCCCTTGGCAGGCGAATTGGTGGTGTACGACGCCCTGGTTCACATAC
CCTCCCCCCCCCCCACCGCGCCGGGTTTTGCGTCCCCCTTGGCAGGCGAT
GTGGCGGTGTACGACGCCCTGGTCCGAATGGCGCAGGACTTTGTGATGGC
CGCGCCACTCATCGCTGGGCATGGGAACTTTGGCAGCGTGGACAACGACC
CGGCGGCTGCCATGCGATATACTGAGGTACTCGATTCTTAAATGGGATAG
CCAACCACAAATATGAGAACACTTAATCTCACACACGTGCCATTGCTCCT
CGTTACCATTTATGTGAATGATACCGAGGTCAGTTCGATCGCCCCTCCCC
TCTGTCATGCGATATACCGAGGTCCTTTCAATCGCCCCTCCCCTCCAGTG
GCGGAATCTCTCTGCGCTATCGATAGTCGATATTTGATAGTTTGACCCAC
ACTGAATCCAAGTAGTTAGTGACGCCACCCACGAAATCAGTAGAGCCCGA
TAGCTATCTACTGATCGATATTTCATCACTGGCTACAGCAGGTGACTCAA
GCAAGCCCCCCTACGCGTCCCCTCCTCCCCGCCAGTGATGACTATCGACT
ATTGATAGATGAATCGGGACGAGCCTTTTGGCACGGGGCCTGGAACTCGC
TGCTTATCTACCACTCAAATAAATCAGTACTGTCGATAAAATTGGTTGAT
TCGCCTACAGTAGATATTCCATATCTGCTCCCCGCCCACCCGCCTGGCCC
GCAGTGCAAGCTGGCGCCTCTCTCGCGGGACGCCTTGATGGCGGACGTTG
CCCTCGACACGGTGGAGCTGGTGCCCAATTTTGACGGGAACGAGGTGGAG
CCGGTGGTGCTTCCTGCACGCCTCCCGGTGAGCGAGAGAAAAAAAGCCTT
CCATGTATGAGTAGCATTTCTTGAAGCTGAAGTGTGGGCATGCGTGTGTA
CATGTGCTCACGTTGTATGTGTACTGACGTGGTGCTTGCCGCAGTCCCAA
CCCCGTTGGCCAATGTGTGTACTAAGAAAAGCCTTCCATGTACAAAGTAC
CTCTTCTTGAAGCGGAAGTGTGGGCATATGTGTGTGTGTGTGTACCGCTG
TGTACCTCGAATCCCGGTAAGCGAGAGCAACCAACGCCTTCCATGTACTT
CTTCTTGAAGGGGGAGTGTGGGCATGTGTGCGTGTCCTGCTGTGTATAGT
ACCTCGAATCAACTTGTGCATAGAGCCCTATACTTCCCAGAGTGCCTACT
TATCGTGCACCGCCGACTGTGCTCGCATGGGTTGTCCAATGCGTACCGTA
CACAGTTGCATTTACAGATGCAGTGATAGTGACAGTTACAGTGACAGGTA
CAGGCACAGTTACAGTTGCAGGTATGTTACGTTGCAGGTACATTTGCAGC
TGCTTGTACAGTTGCAGTTACATTACCTTTCCAGCTACATTTACAGTGAC
AGGTACAGTTACAGGTGCAGTTACAGTTGCAGGTATGTTACGTTGCACGT
ACATTTGCAGCTGCTTGTACATACAGTCACAGTAACAGCTACAGTTGCAG
GACCTCTACAAGCATGTGTAACTGTACTGTACACAGAGTGGTACTTCAAG
TACGTACTTATAGTAGTTTGAACCTCATCGCTCCTCCGGCCAGTGCGCGG
CCTGGCTGGTAGGAACCCAGCATGCTCCATCCCGGCCTGGTTGGGATGCT
AGAGTCAATGGCTACAGCACATGCCTAGTCGGAGGGCGAACCCGAATCTT
TTTTGCTCAGGGTTGTCGGCTAAGCACGTCTTGCAAGGTTATGAGTGTAT
CACTTTTGTATCTTCTCCTCCTCCTCACCCCAGATGCTCCTCTTGAACGG
AGCAACGGGCATCGCCGTCGGCATGGCCACCAACATCCCGCCGCACAACC
TGGGGGAGCTCACTGAGGCGGTGCTGGCCCTGATCCGCGACCCCGATCTC
CCGGACGAGGATCTTTTCCGCATCGTGCCCGCCCCAGACTTCCCAACGGG
CGGTGAGTGAGACTGTTCTTTTTGTTGTCGTTCCCGATGTTTCGACTTGG
GGCTGTCGGCGTTGCACGCAAGGTTATGTCGCACAACAAGCCAGTGAGTA
CATGCACTACGTGGTACTTCGAAGCATATACTTCCGGAAGTATATATTTT
CGGCTGTGTGTTTGGGTCTGATGTGATCCGCCCGCCGCCCACATCTCTCC
CGGGGCCGACGAATCTTTTCCACGCCGTGCCCGCGCCGGACTTGCCTGCG
GGCAGTGAGAAAGAACTTCTGTGGAGTAGAATTGCTTTTTGACCTGTGTT
TGGGCCGCAGTCGGAAGCAGACCGGATCCCGGCGCGGATTTTTTGCTCTT
CTTTTTTGTTTTGGTCGCACACCAAGCAGTGATCCGACCGACACCCTCTT
TATTTGCGTTTTTTATCTTTGATGTGATAGTCACTGATACGAGAACACTC
AAATATTAAATGGGAGGGCCACTAGTACGAGAACACTCAATCCCACACAC
ATGCGATTGTACCTTGTTGCTTAGAAGTACAATGTACTCGAGTATATTAA
CACCCTCGCTACTTGCACCCCGAAAAATGTTAACAACAACAAAGGATGCA
TCATGGGGCTCTCGGGGGCAAGGAGCCTGTACCAGACGAGCAACGGGGGC
GTGACTGTCCGGGCCACAACGCACATGGAGGTGCTGGAGGGGGCAAAGGG
GCGGCCGTCCCGCAACGCCATCGTGGTGACGGAACTCCCCTACATGGTGA
ACAAGTCCGGCCTTCTGGAGAAGATGGCGGGCCTCGTCAACGACAAGAAG
GTCCGTGCACTGTATTATTGCTGCTGTATTTCCGCTGTACTTGTACTGTA
CTGCTGCTGTACTGCCTCTGTAATGGTGAACAAGTCCGAGGGCTGGAGAA
GATGGCGGGCCTCGTCAACAGCAAGAAGGTCCGTGCACTGTATTGCATTG
CTGCTGTATTGCCGCTGTACTGCTGCTGTACTGCCACTGTATTGCTGGAG
AAGATGGCCGGCCTTGTCAACGACAAGAAGGTCCGCACACTGTATTGCCG
CTGTACCGCTGCTGTACTGCCACTGTATTATTGCTGTACTGTACTCATTG
GCTGTTTTGCCCTCCCCGGTCCCCCGCTGCCGCACCCTCTATCTCCATCC
TCTCTTCCCGCGGGAAAAAATGCACACACACACACACACACGTGCGCGCG
CGCGCGCACACACACATGTGCGCACGCACGCACTGCTGGCGTGTGCGTTG
CCCCCCCGGCCGGTGTGCTGCGCCAAAACCTCGTGGGCTGGCACGTGCTG
TGCTGTACCGGATTTTGCACTGCCATTGCGGGCTCCATGAACCTCCTCCC
GTGGCCGTGCGTGCGTGCCTGGATGGGGAAATAGCTGGAAGGCATTTCTG
ACCTCAGGGACGGTGAGTTCCAGGAGTCGACGTGTCGGATATCAAAACGG
ATTGGCTAGCGTCTCGTGACTAGGCATTTCCGACCTCAGGGACGGCGAGT
TCCAGGAGTTGACGTGTCGGATTTCGAAACGCATGGTTAACTAGCGTCTC
GTCAGTTGGTGTCGGCGATGTGTTGTGTTTGTGTTTGTGGTGCAGGGCGA
GCGACTGCTACTGGATGGCAAACCCGAATTGTTCGCCCTTTTACCCCTGG
GGTTCGTATTATCGTAGGGTTTTAGTGTGTATGTCCGATTCAGCAGGGGT
AAAAGGGTTCATTTAGGGCTGTCGGCTACGATGTAGGCACGCCAGGTGTA
CTCTCAACGCGAGGTTAACTCTTAAGCCGCAAGACAAGTATGCCAATGAG
TACACACACACACACGTACTCGAGTGTACTGTATATGTGCACTGTACTCG
AATACAGCGGTTGGATCTGCTTGGAAGTGGTATTCCTACGGGCTGCTATA
TGCATACTCGTACTCGGTATACATGTCAGCCCGTAGGCATGCCAAATATG
TACTGGTCCGTAGCCCTATTGTACTCTCGGAAGAAGTATTGCAGTGTCGT
ACAAGTACAATAGATAAGTGCTTCGTGCAAGCAGATCGTCGTCTGCGTAG
ATGTATTCAACCGATAGCATGGGTTGTTTCGCGCTCGGGTTAGCCCTTTT
GCCCCTGGGGTCCGTACAATCATAGGGTGTTACAGCAGTGTGTACTGTAA
GTCCAACTTAGCAGGGGTACAAGGGTTAAGCTGATGTGCGTATAGCCGGC
CTTGATGTGTCAGCACGGGTGAGCTCCCATGCGTGCTGCCCGTACTTGTA
GGGCTGCTGTGCTTGATCACAGGATGGATGACACTCTGTGTGTTTCCGTG
CTCTTTTTGTGCAGCAGAGCTGGTGCGGCAGTGTCGCGGAGGCGTGTCAG
ATGTGGGAATGCTCCGCACAGCAGGGTTGGCACTTAACCCCGAAGCGGTG
CCCTTGTAGGTCCTTAGTGAGAGGTAGTTATTGGCAATTAGACCTAAAAT
GAAGGTTAGTTGGGCCCTGCAAGTAGTTAGCCTCTAAGTGCCAACCCTGC
CGCACAGTGTAGCTTGCCGTAGTCCCGGGGCAATTCTTTTGGGGTGTCCA
AGTAGTTAAGGAGAACTTCTTGGAGTGTCCAGGTACAGTCGTTAAACGAG
GCATTTTTGGAGTGTCCGAGTAGTTAGCGGAGAACTTTTTGGAGCGTCGA
AGGAGTACACAGTTAAGGAGAACTTTCCGGAGTGTCCAAGTAGTTAAGGA
GAATGAGTGTCAAATAGCCCCAGGTAGTTGGGAGACCACGGCTGCAAGTA
CTTCGAAGAACTTCAAAGCACGCACTATATGAATACTCTACTCGTACAGT
AGTATATATACAGTGTACACGCCACCCGGACTCTCAGGAGTCGGGGATGG
GGGGGGTATGGACCCGGCCACCCCTCCGCTTCTGGCGGGGGATGGCCACC
CCCTCCCACCCTGGCTCTGCCAGGGGAGGGAGGCTGCTCCGTCTCGACCG
AGGCGCGTGGTCAGTAGTCTCGGGGCTACGGCAAGCACAAAGTGAGTAAG
TACATACTAGGTAGTATGTACTTGGAAGTATACACACGCCTCAGCAGAAG
AGCACGGCAACCACCAGTGTTGAGCTTGCCCCCCCCCCCCCCCGGTATCA
GCAATAAAAATGCGGCTGCGGCCGTATCCTCCCTCCTGCCCTCTCTCTCC
CAACCCCTCTCACTTTTGCCATCTCCCTCCCTCCCTTCCCTCCCCCCCTC
TCTCTCTCGGTGCCACCTCGTGAATAGGAATGCGGCTGCGGCCATATCCT
CCCTCCTGCACTCTCTCTCCTCACCTCTCTCACTTTTGCTATCTCCCTCC
CTCCCTCCCTACCCTCTCCCCCCCCCCCTCTCTCTCGGTGCCACCCCGTG
GTGGGTTTCCGGCCGCTGGGATGGCGTTCCTTTCTCTCCCTGCTTTGGGC
CGGGCCCCTCCTACATTGCGCCTCCCTCCCGATCGTCCAGAGAGTGATCG
GGAGGGCATCCGCGTGGTGGTTGAGCTCAAGCGTGATGCGGTTCCCCAGG
TGGGAGGGGGGGGGTGAAATCAAGTACCCGTATCCTACCATACTGCAGCA
ATCACCACGTTTGTCGGCCAGGTCCTGGCCCCCGTGGCCACTTTTTGCAG
ACATCGCTTGCCGAATACGTACTAGTAGTGGTTGGGTTCGTCAGAAGAAG
AAGAAATAGGCAGTATTCGAGAGAGAGCATTAGAGAAAGAGAGAGGGAGG
GAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGGGAGAGAGA
GAGGGAGGGAGAGAGAGGAAAGAGAGGGAGGGGGGGAAGAGAGATAAGAG
AGCGAGAGACAGAAAAGGAGGCGGGGGGGAGAAAGAAGAGAGAGGGAGAA
GAGAGCGAGAGACAGAGAAGGAGAGAGAGGGAGAAACGCTGCTTTTAATG
CTGCTGCTTTTAACGACTTCCACTCTGTTGTCCAATCTCGCAGGTGGTGC
TGAACAACCTCTTCAAGAAGACCCAGCTGCAGATCTCCTTCAGCGGCAAC
ATGCTTGCCCTGGGCGACGACGGCAAGCAGCCCCAGCGCTTCACGCTCAA
GGCGGCGCTGCAGTCCTTTGTAGAGTACCGCTTCCAGACGGTGCGGCGGC
GGACCGCCTTTGAACTCGACAAGGTGAGAAGAGCTGCTGCTGCTGGCGCG
CTTCAGTGATGGAATATCGAAGCAAATCAACCTATTTTATTGACAATGCT
CATCTATATTTTCTATCGATAGGGCAGCCTTGCAGTCCTTTGTCGACTAC
CGCTTCCAGACGGTGCGGCGGCGGACCGCCTTTGAGCTCGACAAGGTGAG
TGAGATGCTTCTGCTGCCGCGCTTGTCCCGTCCGCGAAACAACTTTTTTG
TTGTTAATTCTATGACGTGATACCACTAGTATGAGAACACTCCATTCTTA
AATGAGACAACCGTTAATACTAGAACACTCAATCTCACAAACGTGCGATT
TTCCCTCGTTACAATTTATATAAATCAACAACCAAAATCTGCTGATACCC
CCCCCCCCTCCAACTGCCGCTGCCCCGGGGTCGGGGCAGGACCTGCATCA
GTGATGGAATATCTAGGCACATCAACCTATTTATCGACAGTACTGATCTA
CTCGTATACATCTATTGATAGTCGATATTTGATAGTTTGAACCTCACTAA
ATCCAAGTATTATTAGGAACAACACAGGGCGAGGTGCGGGCCACGTCGCT
AGAGACCTCAGCAGTGGCCCTTCCTTAGCTTGCCAGGGGAATTTGTGCGG
GGAAGGGGAGAAGAGGAGGAGGGGGAGGTCGTTACAGTAACGCCACCCAC
AAAATCAGTCGAGCCCGATAACTATCTACTGACTGATATTCCATCACTGA
CCTGGATGGACCCTCCTCAGGTGAAAACGCGAGAGCACATCGTGGCGGGC
ATGCTGCTGGCCCTCAAGGACATTGACAATGTTATCGAGGTCATTCGGGA
AAGGTGGGCACCTCGAGTGGTTTCCTGAGGATTTTTCGATGTGCTGCCCC
GTCTCGGTTGATGCGATGTGATGTGATGTGCACGATAGTGTATGGTGGTT
GGACATCACATCACGTCATGATATTCGATCATGATGCTTGATGCGATGTG
ATGTGATGTGCGTGCTGTTGTAGGCGCGCGTGATCGATGGCCTTGGGAGT
ACCGTAATCGTCGGAGATATCTTGCCGCCCCGGGACAATTTTTGGGATGC
AATTTCTGGCGGGGTAGGTTCCGAATAGTCCTGAAATCCCTCGTACTAAT
ACCTCCAGGTCCTGAGCGTAAGTTCCCGAGTTTTCCCGTGCGAATCCGAC
CAGTATTCGGCGAGAAATGCCCTCGCGAAGGTTGGCATTGGAGGGCAAGA
TCTCTCCAACGATTGCTGTAGCCTGGCCAGTGTAAACGCCGGCGTGCTCC
GCCCCAGCCTACATACTGCAGTTGGCATGCGAGAGTCCATTGCTAGTACG
CTACTCCTGTCGGAGGGCGGGCAAACCCAAAGTTTCAACTCAACTAGTAG
TATGTCGTGTAGTTACATTCTTTAGTATTTCCGTCCGGGGCCATACCTCT
CAATCATTCATTCTCGTCCCGCTCAACCGACCTTCGCGCTCCCCCTCTCT
CTGTGTGTGCGCGCATGGATGCGTGCGGGCGGGCGGGCGGGTATGCGGGC
CTGCACGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTATTCTGC
TCGAGAGTTCTGGATCCTGCCGCCCACATCACTCTGTTTCATCACTCTCT
AATGTTAGATCTAAACAACACGCGCATGTGTGTGTGCGCACGCGCGCGCG
CGCGTGTGTGTGTTCGTGTGTGTGTTCGTGTGTGCCGCGCGCGTCCCGCG
CGCGTGCGTATTGCTGGACTGCCGCCTGGCGCCGGCTGCAGCAAGGACCA
GTCGAAGGCGAGGGAGCTCCTGCAGGGGGAGGCGTTTGGCCTGTCTCTGG
AACAGGCGGACGCCATCCTGGGTCTGCGGCTGGGGCGCCTGACCTCCATG
GAGGAGGACAAGATGGAGAGGGAGGGGAAGGACCTACGCAAGCAGATCAA
GAGGTCGGTGGTGGTGGTGGTGGTGGTGGCGGCGGTAGCGGTGGTGGTGG
TGGTGGTGGTGGTGGTGGCATTGGCGATGATAGCGCAGATTTCAGCCGAA
GCGTCGCCCTCTGTGTCGGCGATAGTGTCTGTGGTGGTGCATCTGAGCAG
ATTGCCCGGCAACTGTGTCAACAGCGGCACGGTCCTGCTGTGGGCACTCC
TGATGACAAGTTCTTGGAAGTTACAGTAGCGCACGGATGTTCACGGTAAG
GCTGACCGTTGCTTTGTTTGGCGCCGCCCGTCGTGTCGGCGTTGATGAGA
TCCGAAGCCCAACCGATCTTTCGTGTTGTCAGACCCAATCACGGTTCGGG
TTGCGAAGGTGCAATAATCGCGCTTTTCGTAGCAACGCTAGCCGGCGCAA
AGTTTACGGTGAACATCCCTGTAGTAGAGGGCAATATCTTCTGGCTGTGG
GCCTTCACCCTTTTGGGTAAGCCCGTGGAAGGGCTCCCGTGGGCCTACAA
TGAGCACTTGCGTGTTGGTGCACACACCCTGCCATAGAGAGCTCTATGCG
GTGCTCGTACTGCTTGGAAGTTCGTGGAGTGCAAGCACTGCTGGACTGGA
GGGGATTGTAGAGCCGACACGGGCGTGTGCACATGCGCGTGTTGTCTACG
TGCGGCTAGAGTGGGCGTTTTTCACTCGTGTGACCGTGTAGACATGGCGA
CCGGCTCCTAAGCGTAGGCACGGCAAAGTTGAAGTTTGGCAAACCACGGC
TTGTTTGACTGAAGACGGAGACATGCAGAAAATTGTTTCAACGTGGGACT
TGTTCCAAACTACGGCGTTTAAGACCGGCGGCACAAACTACGGCGTTTTA
AACAGGGCCCGGGCCGCGGCCGACGATGCCGGCTCACTATGTGTACAGTA
TCGTGAACTCACGACCCGGCAGACTGGAAGGGATAATGTCGGAGGACACG
AGCGTGTTCGACGTGATGGAGAAGGAGCTAGAAGAGTTGAAGTCCAAACA
TGCTGTCCCTAGACGGACCATCATACAGCCGGATGAGGGTGAGCAGAGGT
GGTTAAGTTAGCACCGTCTTCGGGCTTGAGCGGTTGGACTGCCCCCAAGC
TGTTACCCGAGTCCGCACATGCTCTCCCTACTTGTAGACGATAATACAGC
CGGATGAGGGTGAGAAGAGGTGGTTACTTCGAAGTACTTAACACCGTATT
CGGACTTGAGCCGGTAGACTGGCAGCCCCCAAGCTGGCACCTGAGTCCGC
ACATGCTGTCGCTAGACAGACCATCATACAGCCGGATGAGGGTGAGCAGA
GGCGGTTACAAGTAGCACCATCTTCGGACTCGAGCTGGTAGACTGGCAGC
CCCCCCCCCCCCACAACAACAAACCATACAACGCCTTCTACGTGTGCCGC
AGGGGAGCTGAGCGAGGAAGATCTCCTGGCCAACGACCGCTCAGTGGTGG
CAACGCCTTCTAACAAACCCTACTACAAACGCCTTCTAACAAACCCTGTA
ACGAACGCCTTCTATGCCGCTGCAGGGGAGCTGAGCGAGGAAGACCTCCT
GGTCAACGACCGCTCGGTGGTGGCAACGCCTTCTAACAAACCCTACGAGT
ACAACGCCTGCTAACAAACCCTGCAACGGCTTCTAACAAACCTTACAACA
CCTTCCAACAAACCCTACAACGAATGCCTTCTATGCCGCTGCAGGGGAGC
TGAGCGAGGAAGACCTCCTGGCCAACGACCGCTCGGTGGTGGCAACGCCT
TCTAACAAACCCTACAATGCCTGCTAACAAACCCTACAACGCCTTCCAAC
GCACCCTACAACGCCTTCTAACAACCCTACAACGAACGCCTTCTATGTCT
TCTAACAACCCTACAACGAACGCCTTCTATGTACGCCGCAGGGGAGCTGA
GCGAGGAAGACCTCCTGGCCAACGACCGCTCGGTAGTGGTGGTGACGGCG
GCGGGGTACATCAAGCGCATGCCCATCGAGGAGTTCACGCAGCAGGGGAG
GGGAACCCGCGGGAAGGCGGGGGCGAAGATGTCCGACGAGGACGACACCG
TCGTGCACTTCTTCACTTGCAATGTGCGTGTCTGTTTACGACTACAAATG
TCTATCTATTCATCCATCTACGAGGTACTTCAAAGTATTATCTATAGATG
TCCGACGAGGCCGACACTGTCGTGCACTTCTTCACCTGCAATGTGTGTGT
CTATCTACGACTACTTACAAGTGTCTACTTTGAGTGGTAGATACGTGGCG
AGTTCCAGGCCCCGTGCCAAAAGGCTCGTCCCTAAACAGGACTCAACGAA
GCCCTTCTTCCCGTCGCAGACCAACAAGAAAACCAAAATAAAGAAGGAAA
GGGGCGGGGCGATGAGGAAAGGGAAGAGGCGCAGGGAAGTATCTTGTGCT
CGCAGTGGGGCATGCGGGTGGGGCAGGCGGGGACGAAGCCGCACACGAAC
ACCGAAATCACGACGTACCTGGGCGAGTGCGAGAAGAGAAGGCGTGAGCA
TGTGCCGCAATATGTACCGCGCACGAACCTCGTGACCACAAGTGTCTATC
TATTCATCTAACAATCTATCTATTGTCTATCCACCTGTCCTTCACTTGCA
ATGTGCGCGTCTATCTACGACTGCAAGTGTCTGTCCTTTGTCCAACCGTC
TGTCTATTGTCTCTATCGCTTGCAATGTGCGTGTCTAGCTCTATCTACGA
CTACAGGTGTCTATTTATCTACTTCGAAGTATCTATTGTCTATCCGCATG
TCCATCCAAGTAGCTATACCTTGAAATACTACATGCACTTTCCCGAGTCT
TCCCGTGCGAATCCAACCAGTGCTCGGCGAGAACTTCCCTCCCAAATACT
GGCGCGGGGTGGTGGCAAAATCTTAGACTCTTTCGACAAATGCGGTACTA
CTACTACATAGTACTTCGAAGTACTACTGTACTGAGCTCTCGCCCCCCAG
TGCTCACTCCCCCTCCACCCCCTTTTCTCACCCCGTCTGCATGCGGACTG
TGGCGGTTGCGGTGATGGCCCCGGTCCGCTGCTGTGGTCACGGCTGACGC
GACATGCTTGGGGGCGACACGGACGATGCGTGCGGCGGCGGCGGCGACGA
CACCCATTGCTGTAGGACCACGACACGGTCCTGTTTGTGTCTGACCGGGG
GATTGCGTACGGGATTCGGGCATTCCAGGTGCCCACGGCCTCGCGCACCG
CCAAGGGCGTCCCCATGCCTCAGGTGAGTTACAATAGGATTCGAGAGTCA
GAGATCAGAGAACCAAGTGGTTGGGAGACTTGGTTTTGAGATACTTGAGT
AGTTTGTTACAGTGAGAGATGAGAGAACCAAGTAGTTGGGAGACTTGGTT
TTGAGACACTCAAGTAGTTTGTTACTGTGAGAGATGCGAGAACCAAGTAG
TGTGGAGACTTGGTTTTGAGACACTCAAAGTTTGTCACAGTGAGAGATGC
AAGAACCAAGTAACAAGCAGTGCGGAGACTTGGTTTTGAGACACTCAAGT
AGGTTGTTACAGTGAGAGATGCGAGAACCAAGTAGTGCGGAGACTTGGTT
TTGAGACACTCAAATACAGTAGTTTGTTACAGTGAGAGATGAGAGAACCA
AGTACTGTAGTTGGGAGACTTGGTTTTAAGACACGAAGTAGTTTGCCATG
GGATTCGGGCATTCCAGGTGCCCATGGCCTCGCGTACCGCCAAGGGCGTC
CCCATGCCTCAGGTGAGTTAGGGGGGTGGGAGGGGGGGGTACGAGTATTT
GTGTTTACTTGGAAGACTGTGTGTGTGTATGTGTGTGCACATGTGTGACT
CGCGCACAAGTATGACATGTCCCTACTACAGGAGCAAAGACGAGGATCGT
TCGGGTCCAGGGCATGCACAGAGACGTGAGTACACACGCCTGCTAAGTAC
GAGCACTACAGTCGTGTGGTACTTCGAAGTACATACTTGCATACTTCCAA
GTACACATATACTCGAGTACATGCATACATACGTACGCGCACGTCGCATG
ACAACGCGGAGCAATGAATTGACATCGCTGCTTGGTGCTTCTACGCGGCC
GTGAAAACACTTCTACTGTAAGTATATATTACTAGTATATGTACTCACAC
ATTGTGCTTGCCGTAGTCCCGAGATCGTTGACCACGCGCCGTTCACGACG
GAGCATTCCTGGCCCTGGAATTTTTTTCTTGTCTGAATGTGCCCTCACTT
GTGTGTGTGTGTGTGTGTGTGCCTGCGTGCGTGCCTCCTACCTGCTTGCT
TGTGTGCGCACATTCGTGCATGCGTGACCGTCTGCGTGGTATGCCACGTG
TGCATGCGCGCATGTGTGCGCATGCTTGTGTGCATGCTTGCGTGCGTGTG
TGCGTGCGCGTGCCTGCGCTTGCGGGCGGCAGGTGCCAGTGTTAGCACTT
AGCCCCTAAGTGGTGCCCTTTTAGGCCCTTAGCTACTGTAGAGGTAATTA
GGGGTAATCATACCTAAAACGGAGGCTAATTAGGCGATAGTTAACCTCTA
AGTGCCAACCCTGGCAGGTGCTTCCCCTGGCGTCAGAGGAGGGCATCACC
AGCATCATGCCGGTCAGCGAGTTCCGCGACGACGAGTACCTGGTCCTCCT
GAGCAAGGCAAGGAACTAAAGACCTCTGCAGTGGTAATGATGTGATGTGA
TGTGGGTTGTAGTCTAGTGTCCAGTAGTTCGACATCACATCACATCAAAC
CACATCACCGGCATCATGCCCGTCAGCGAGTTCCGCGTTGACGAGTACCT
GGTCTTCCTGAGCAAGGCAAGGAACCGAAGATCTCGACAGTGGTAATTGT
GTGATGCGATGTGGTTTGTACTCTAATTTCCAGTGGTTCGATCATCACAT
CACATCAAACCACATCAATTTCTGTACAGCTGTAGGGGTGTACTTAGGAT
CAGTGATGGAATATCGATCAGTAGATTGTGATCTGGCTTGACTGATTTTG
TGGTTGGTTTTACTAACTTCTTGGTGTAGTGTGGGTCCTATCGAATATCG
ACTATCGATACACACTACGTAGTATTTTAAGGAACAACACGGGGCGAGGT
GCGGGCCACGTCACTAGAGACCTCAACAATGGCCCTTCCTTAGCTCGCCA
GGGGACAGTTGTGTCGGGAAGGGGAGGTGGACGGGGACGAGGAAGAGGGG
GAGGAGGAGGAGGAGGAGTAGTATATACATGCTGTAGATCAGCACTGTCG
ATAAATAGGTTGATTTGCTTAGATATTCCATCACTTTCCATCACTGCCTG
GAACAAGACGGAGCCCCCCCCCCCCCTTCCCGGTGGGCAGAGCCAGGGCG
GGAGGGGGGGGGGAGGGAGCACCCATTGGCGGATCGGTTGTTGTTTCGGC
TACTTGCCTGCGGCATGGTACACGAGGGCAACACCTGCGAATACTTGGAA
GCCTCGTTTTCTCCCCTTCTCCACACAAACTTCCCCTGGCGAGCTACAGG
GAAGGTTCACTTTTGAGGTCTTTTAGTGACATGGCCCGCACCTCGGCCTG
TGTTGTTTCTGTTACTTCATAATACTTGGAAGCACTCAAGCGGTTGCGAC
TGCGATATAGAGGCCCACAAATACACGCGCGGCGCACGCCTCCTCCGTGT
AACCCTAAATAACACCCGCAGTAAGGGTACATCAAGAAGACCTCGCTGTC
CGCCTGCGGGTACTTGGAAGCACTTTGTTGCGACTGCGATATAGAGGCTA
GCAAACACGCGTGCGTATATGTTTTGCACGCAGACAAACAAGCGAGTGGA
GAGAAGAGGTGTCCCTACTTATTCCGCACACGTCTCCCTGAAACCCTAAC
CCCCGCAGCAAGGGTACATCAAGAAGACCGCG
back to top

Coding sequence (CDS) from alignment at S-ischiensis_contig84:518298..532579-

>mRNA_S-ischiensis_contig84.20079.1 ID=mRNA_S-ischiensis_contig84.20079.1|Name=mRNA_S-ischiensis_contig84.20079.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=3396bp|location=Sequence derived from alignment at S-ischiensis_contig84:518298..532579- (Schizocladia ischiensis KU_0333)
ATGGTGGGGGAGGTGTTGGGCAAGTACCACCCGCACGATGGTGGGGGAGG
TGTTGGGCAAGTACCACCCGCACGGCGATGTGGCGGTGTACGACGCCCTG
GTCCGAATGGCGCAGGACTTTGTGATGGCCGCGCCACTCATCGCTGGGCA
TGGGAACTTTGGCAGCGTGGACAACGACCCGGCGGCTGCCATGCGATATA
CTGAGGCGATGTGGCGGTGTACGACGCCCTGGTCCGAATGGCGCAGGACT
TTGTGATGGCCGCGCCACTCATCGCTGGGCATGGGAACTTTGGCAGCGTG
GACAACGACCCGGCGGCTGCCATGCGATATACTGAGTGCAAGCTGGCGCC
TCTCTCGCGGGACGCCTTGATGGCGGACGTTGCCCTCGACACGGTGGAGC
TGGTGCCCAATTTTGACGGGAACGAGGTGGAGCCGGTGGTGCTTCCTGCA
CGCCTCCCGTGCAAGCTGGCGCCTCTCTCGCGGGACGCCTTGATGGCGGA
CGTTGCCCTCGACACGGTGGAGCTGGTGCCCAATTTTGACGGGAACGAGG
TGGAGCCGGTGGTGCTTCCTGCACGCCTCCCGATGCTCCTCTTGAACGGA
GCAACGGGCATCGCCGTCGGCATGGCCACCAACATCCCGCCGCACAACCT
GGGGGAGCTCACTGAGGCGGTGCTGGCCCTGATCCGCGACCCCGATCTCC
CGGACGAGGATCTTTTCCGCATCGTGCCCGCCCCAGACTTCCCAACGGGC
GATGCTCCTCTTGAACGGAGCAACGGGCATCGCCGTCGGCATGGCCACCA
ACATCCCGCCGCACAACCTGGGGGAGCTCACTGAGGCGGTGCTGGCCCTG
ATCCGCGACCCCGATCTCCCGGACGAGGATCTTTTCCGCATCGTGCCCGC
CCCAGACTTCCCAACGGGCGGATGCATCATGGGGCTCTCGGGGGCAAGGA
GCCTGTACCAGACGAGCAACGGGGGCGTGACTGTCCGGGCCACAACGCAC
ATGGAGGTGCTGGAGGGGGCAAAGGGGCGGCCGTCCCGCAACGCCATCGT
GGTGACGGAACTCCCCTACATGGTGAACAAGTCCGGCCTTCTGGAGAAGA
TGGCGGGCCTCGTCAACGACAAGAAGGATGCATCATGGGGCTCTCGGGGG
CAAGGAGCCTGTACCAGACGAGCAACGGGGGCGTGACTGTCCGGGCCACA
ACGCACATGGAGGTGCTGGAGGGGGCAAAGGGGCGGCCGTCCCGCAACGC
CATCGTGGTGACGGAACTCCCCTACATGGTGAACAAGTCCGGCCTTCTGG
AGAAGATGGCGGGCCTCGTCAACGACAAGAAGCTGGAAGGCATTTCTGAC
CTCAGGGACGCTGGAAGGCATTTCTGACCTCAGGGACGAGAGTGATCGGG
AGGGCATCCGCGTGGTGGTTGAGCTCAAGCGTGATGCGGTTCCCCAGAGA
GTGATCGGGAGGGCATCCGCGTGGTGGTTGAGCTCAAGCGTGATGCGGTT
CCCCAGGTGGTGCTGAACAACCTCTTCAAGAAGACCCAGCTGCAGATCTC
CTTCAGCGGCAACATGCTTGCCCTGGGCGACGACGGCAAGCAGCCCCAGC
GCTTCACGCTCAAGGCGGCGCTGCAGTCCTTTGTAGAGTACCGCTTCCAG
ACGGTGCGGCGGCGGACCGCCTTTGAACTCGACAAGGTGGTGCTGAACAA
CCTCTTCAAGAAGACCCAGCTGCAGATCTCCTTCAGCGGCAACATGCTTG
CCCTGGGCGACGACGGCAAGCAGCCCCAGCGCTTCACGCTCAAGGCGGCG
CTGCAGTCCTTTGTAGAGTACCGCTTCCAGACGGTGCGGCGGCGGACCGC
CTTTGAACTCGACAAGGTGAAAACGCGAGAGCACATCGTGGCGGGCATGC
TGCTGGCCCTCAAGGACATTGACAATGTTATCGAGGTCATTCGGGAAAGG
TGAAAACGCGAGAGCACATCGTGGCGGGCATGCTGCTGGCCCTCAAGGAC
ATTGACAATGTTATCGAGGTCATTCGGGAAAGCAAGGACCAGTCGAAGGC
GAGGGAGCTCCTGCAGGGGGAGGCGTTTGGCCTGTCTCTGGAACAGGCGG
ACGCCATCCTGGGTCTGCGGCTGGGGCGCCTGACCTCCATGGAGGAGGAC
AAGATGGAGAGGGAGGGGAAGGACCTACGCAAGCAGATCAAGAGCAAGGA
CCAGTCGAAGGCGAGGGAGCTCCTGCAGGGGGAGGCGTTTGGCCTGTCTC
TGGAACAGGCGGACGCCATCCTGGGTCTGCGGCTGGGGCGCCTGACCTCC
ATGGAGGAGGACAAGATGGAGAGGGAGGGGAAGGACCTACGCAAGCAGAT
CAAGAGACTGGAAGGGATAATGTCGGAGGACACGAGCGTGTTCGACGTGA
TGGAGAAGGAGCTAGAAGAGTTGAAGTCCAAACATGCTGTCCCTAGACGG
ACCATCATACAGCCGGATGAGGACTGGAAGGGATAATGTCGGAGGACACG
AGCGTGTTCGACGTGATGGAGAAGGAGCTAGAAGAGTTGAAGTCCAAACA
TGCTGTCCCTAGACGGACCATCATACAGCCGGATGAGGGGGAGCTGAGCG
AGGAAGACCTCCTGGCCAACGACCGCTCGGTAGTGGTGGTGACGGCGGCG
GGGTACATCAAGCGCATGCCCATCGAGGAGTTCACGCAGCAGGGGAGGGG
AACCCGCGGGAAGGCGGGGGCGAAGATGTCCGACGAGGACGACACCGTCG
TGCACTTCTTCACTTGCAATGGGAGCTGAGCGAGGAAGACCTCCTGGCCA
ACGACCGCTCGGTAGTGGTGGTGACGGCGGCGGGGTACATCAAGCGCATG
CCCATCGAGGAGTTCACGCAGCAGGGGAGGGGAACCCGCGGGAAGGCGGG
GGCGAAGATGTCCGACGAGGACGACACCGTCGTGCACTTCTTCACTTGCA
ATGACCACGACACGGTCCTGTTTGTGTCTGACCGGGGGATTGCGTACGGG
ATTCGGGCATTCCAGGTGCCCACGGCCTCGCGCACCGCCAAGGGCGTCCC
CATGCCTCAGGACCACGACACGGTCCTGTTTGTGTCTGACCGGGGGATTG
CGTACGGGATTCGGGCATTCCAGGTGCCCACGGCCTCGCGCACCGCCAAG
GGCGTCCCCATGCCTCAGGTGCTTCCCCTGGCGTCAGAGGAGGGCATCAC
CAGCATCATGCCGGTCAGCGAGTTCCGCGACGACGAGTACCTGGTCCTCC
TGAGCAAGGTGCTTCCCCTGGCGTCAGAGGAGGGCATCACCAGCATCATG
CCGGTCAGCGAGTTCCGCGACGACGAGTACCTGGTCCTCCTGAGCAAGCA
AGGGTACATCAAGAAGACCGCGCAAGGGTACATCAAGAAGACCGCG
back to top